data_8ITS # _entry.id 8ITS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ITS pdb_00008its 10.2210/pdb8its/pdb WWPDB D_1300036356 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ITS _pdbx_database_status.recvd_initial_deposition_date 2023-03-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 huanglin36@mail.sysu.edu.cn Lin Huang ? 'principal investigator/group leader' 0000-0002-2121-365X 3 d.m.j.lilley@dundee.ac.uk David Lilley M.J 'principal investigator/group leader' 0000-0001-6882-2818 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, M.' 1 ? 'Lilley, D.M.J.' 2 ? 'Huang, L.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of DUF-3268 k-junction' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Li, M.' 1 ? primary 'Lilley, D.M.J.' 2 ? primary 'Huang, L.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (46-MER)' 14936.987 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 3 water nat water 18.015 118 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGGAGUUAGACUCGCGAAAGCGAGGAACUGCGAAAGCAGUACUUCC _entity_poly.pdbx_seq_one_letter_code_can GGGAGUUAGACUCGCGAAAGCGAGGAACUGCGAAAGCAGUACUUCC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 A n 1 5 G n 1 6 U n 1 7 U n 1 8 A n 1 9 G n 1 10 A n 1 11 C n 1 12 U n 1 13 C n 1 14 G n 1 15 C n 1 16 G n 1 17 A n 1 18 A n 1 19 A n 1 20 G n 1 21 C n 1 22 G n 1 23 A n 1 24 G n 1 25 G n 1 26 A n 1 27 A n 1 28 C n 1 29 U n 1 30 G n 1 31 C n 1 32 G n 1 33 A n 1 34 A n 1 35 A n 1 36 G n 1 37 C n 1 38 A n 1 39 G n 1 40 U n 1 41 A n 1 42 C n 1 43 U n 1 44 U n 1 45 C n 1 46 C n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 46 _pdbx_entity_src_syn.organism_scientific bacterium _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1869227 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 G 3 3 3 G G A . n A 1 4 A 4 4 4 A A A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 U 7 7 7 U U A . n A 1 8 A 8 8 8 A A A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 C 11 11 11 C C A . n A 1 12 U 12 12 12 U U A . n A 1 13 C 13 13 13 C C A . n A 1 14 G 14 14 14 G G A . n A 1 15 C 15 15 15 C C A . n A 1 16 G 16 16 16 G G A . n A 1 17 A 17 17 17 A A A . n A 1 18 A 18 18 18 A A A . n A 1 19 A 19 19 19 A A A . n A 1 20 G 20 20 20 G G A . n A 1 21 C 21 21 21 C C A . n A 1 22 G 22 22 22 G G A . n A 1 23 A 23 23 23 A A A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 A 26 26 26 A A A . n A 1 27 A 27 27 27 A A A . n A 1 28 C 28 28 28 C C A . n A 1 29 U 29 29 29 U U A . n A 1 30 G 30 30 30 G G A . n A 1 31 C 31 31 31 C C A . n A 1 32 G 32 32 32 G G A . n A 1 33 A 33 33 33 A A A . n A 1 34 A 34 34 34 A A A . n A 1 35 A 35 35 35 A A A . n A 1 36 G 36 36 36 G G A . n A 1 37 C 37 37 37 C C A . n A 1 38 A 38 38 38 A A A . n A 1 39 G 39 39 39 G G A . n A 1 40 U 40 40 40 U U A . n A 1 41 A 41 41 41 A A A . n A 1 42 C 42 42 42 C C A . n A 1 43 U 43 43 43 U U A . n A 1 44 U 44 44 44 U U A . n A 1 45 C 45 45 45 C C A . n A 1 46 C 46 46 46 C C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 101 1 MG MG A . C 2 MG 1 102 2 MG MG A . D 2 MG 1 103 3 MG MG A . E 3 HOH 1 201 72 HOH HOH A . E 3 HOH 2 202 46 HOH HOH A . E 3 HOH 3 203 89 HOH HOH A . E 3 HOH 4 204 80 HOH HOH A . E 3 HOH 5 205 92 HOH HOH A . E 3 HOH 6 206 83 HOH HOH A . E 3 HOH 7 207 36 HOH HOH A . E 3 HOH 8 208 6 HOH HOH A . E 3 HOH 9 209 32 HOH HOH A . E 3 HOH 10 210 73 HOH HOH A . E 3 HOH 11 211 66 HOH HOH A . E 3 HOH 12 212 117 HOH HOH A . E 3 HOH 13 213 50 HOH HOH A . E 3 HOH 14 214 112 HOH HOH A . E 3 HOH 15 215 71 HOH HOH A . E 3 HOH 16 216 74 HOH HOH A . E 3 HOH 17 217 110 HOH HOH A . E 3 HOH 18 218 88 HOH HOH A . E 3 HOH 19 219 23 HOH HOH A . E 3 HOH 20 220 57 HOH HOH A . E 3 HOH 21 221 18 HOH HOH A . E 3 HOH 22 222 26 HOH HOH A . E 3 HOH 23 223 5 HOH HOH A . E 3 HOH 24 224 111 HOH HOH A . E 3 HOH 25 225 95 HOH HOH A . E 3 HOH 26 226 35 HOH HOH A . E 3 HOH 27 227 30 HOH HOH A . E 3 HOH 28 228 109 HOH HOH A . E 3 HOH 29 229 115 HOH HOH A . E 3 HOH 30 230 24 HOH HOH A . E 3 HOH 31 231 90 HOH HOH A . E 3 HOH 32 232 68 HOH HOH A . E 3 HOH 33 233 19 HOH HOH A . E 3 HOH 34 234 20 HOH HOH A . E 3 HOH 35 235 12 HOH HOH A . E 3 HOH 36 236 103 HOH HOH A . E 3 HOH 37 237 75 HOH HOH A . E 3 HOH 38 238 13 HOH HOH A . E 3 HOH 39 239 59 HOH HOH A . E 3 HOH 40 240 116 HOH HOH A . E 3 HOH 41 241 11 HOH HOH A . E 3 HOH 42 242 2 HOH HOH A . E 3 HOH 43 243 96 HOH HOH A . E 3 HOH 44 244 10 HOH HOH A . E 3 HOH 45 245 114 HOH HOH A . E 3 HOH 46 246 9 HOH HOH A . E 3 HOH 47 247 14 HOH HOH A . E 3 HOH 48 248 53 HOH HOH A . E 3 HOH 49 249 54 HOH HOH A . E 3 HOH 50 250 38 HOH HOH A . E 3 HOH 51 251 33 HOH HOH A . E 3 HOH 52 252 62 HOH HOH A . E 3 HOH 53 253 84 HOH HOH A . E 3 HOH 54 254 86 HOH HOH A . E 3 HOH 55 255 28 HOH HOH A . E 3 HOH 56 256 1 HOH HOH A . E 3 HOH 57 257 22 HOH HOH A . E 3 HOH 58 258 118 HOH HOH A . E 3 HOH 59 259 44 HOH HOH A . E 3 HOH 60 260 67 HOH HOH A . E 3 HOH 61 261 79 HOH HOH A . E 3 HOH 62 262 70 HOH HOH A . E 3 HOH 63 263 113 HOH HOH A . E 3 HOH 64 264 55 HOH HOH A . E 3 HOH 65 265 41 HOH HOH A . E 3 HOH 66 266 49 HOH HOH A . E 3 HOH 67 267 4 HOH HOH A . E 3 HOH 68 268 94 HOH HOH A . E 3 HOH 69 269 51 HOH HOH A . E 3 HOH 70 270 45 HOH HOH A . E 3 HOH 71 271 25 HOH HOH A . E 3 HOH 72 272 40 HOH HOH A . E 3 HOH 73 273 65 HOH HOH A . E 3 HOH 74 274 7 HOH HOH A . E 3 HOH 75 275 39 HOH HOH A . E 3 HOH 76 276 47 HOH HOH A . E 3 HOH 77 277 78 HOH HOH A . E 3 HOH 78 278 77 HOH HOH A . E 3 HOH 79 279 52 HOH HOH A . E 3 HOH 80 280 104 HOH HOH A . E 3 HOH 81 281 85 HOH HOH A . E 3 HOH 82 282 15 HOH HOH A . E 3 HOH 83 283 56 HOH HOH A . E 3 HOH 84 284 69 HOH HOH A . E 3 HOH 85 285 100 HOH HOH A . E 3 HOH 86 286 3 HOH HOH A . E 3 HOH 87 287 31 HOH HOH A . E 3 HOH 88 288 29 HOH HOH A . E 3 HOH 89 289 93 HOH HOH A . E 3 HOH 90 290 37 HOH HOH A . E 3 HOH 91 291 34 HOH HOH A . E 3 HOH 92 292 97 HOH HOH A . E 3 HOH 93 293 99 HOH HOH A . E 3 HOH 94 294 76 HOH HOH A . E 3 HOH 95 295 64 HOH HOH A . E 3 HOH 96 296 27 HOH HOH A . E 3 HOH 97 297 60 HOH HOH A . E 3 HOH 98 298 107 HOH HOH A . E 3 HOH 99 299 108 HOH HOH A . E 3 HOH 100 300 43 HOH HOH A . E 3 HOH 101 301 63 HOH HOH A . E 3 HOH 102 302 91 HOH HOH A . E 3 HOH 103 303 42 HOH HOH A . E 3 HOH 104 304 8 HOH HOH A . E 3 HOH 105 305 106 HOH HOH A . E 3 HOH 106 306 102 HOH HOH A . E 3 HOH 107 307 58 HOH HOH A . E 3 HOH 108 308 16 HOH HOH A . E 3 HOH 109 309 82 HOH HOH A . E 3 HOH 110 310 21 HOH HOH A . E 3 HOH 111 311 105 HOH HOH A . E 3 HOH 112 312 61 HOH HOH A . E 3 HOH 113 313 81 HOH HOH A . E 3 HOH 114 314 98 HOH HOH A . E 3 HOH 115 315 17 HOH HOH A . E 3 HOH 116 316 48 HOH HOH A . E 3 HOH 117 317 101 HOH HOH A . E 3 HOH 118 318 87 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 125.830 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8ITS _cell.details ? _cell.formula_units_Z ? _cell.length_a 79.540 _cell.length_a_esd ? _cell.length_b 38.730 _cell.length_b_esd ? _cell.length_c 49.800 _cell.length_c_esd ? _cell.volume 124380.804 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8ITS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ITS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.21 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M Magnesium acetate, 30% v/v 2-Methyl-2,4-pentanediol, 0.5 M Sodium Fluoride ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 291 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-12-17 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97851 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97851 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate 32.13 _reflns.entry_id 8ITS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.94 _reflns.d_resolution_low 20.19 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 8884 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.080 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.123 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.94 _reflns_shell.d_res_low 1.99 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 494 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.626 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.536 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 74.0 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.724 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 29.63 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8ITS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.94 _refine.ls_d_res_low 20.19 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 8881 _refine.ls_number_reflns_R_free 432 _refine.ls_number_reflns_R_work 8449 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.09 _refine.ls_percent_reflns_R_free 4.86 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2028 _refine.ls_R_factor_R_free 0.2200 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2019 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 30.6461 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2304 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.94 _refine_hist.d_res_low 20.19 _refine_hist.number_atoms_solvent 118 _refine_hist.number_atoms_total 1114 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 993 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0011 ? 1113 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.3323 ? 1735 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0136 ? 230 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0018 ? 46 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 10.8848 ? 549 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.94 2.22 . . 110 2581 88.43 . . . . 0.2713 . . . . . . . . . . . 0.3245 'X-RAY DIFFRACTION' 2.22 2.80 . . 171 2893 99.97 . . . . 0.2563 . . . . . . . . . . . 0.3024 'X-RAY DIFFRACTION' 2.80 20.19 . . 151 2975 99.74 . . . . 0.1708 . . . . . . . . . . . 0.1773 # _struct.entry_id 8ITS _struct.title 'Crystal structure of DUF-3268 k-junction' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ITS _struct_keywords.text 'k-junction, k-turn, RNA motif, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8ITS _struct_ref.pdbx_db_accession 8ITS _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8ITS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 46 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8ITS _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 46 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 46 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 9 OP1 ? ? ? 1_555 D MG . MG ? ? A G 9 A MG 103 1_555 ? ? ? ? ? ? ? 2.405 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 229 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 240 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 242 1_555 ? ? ? ? ? ? ? 2.140 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 259 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 313 1_555 ? ? ? ? ? ? ? 2.077 ? ? metalc7 metalc ? ? B MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 101 A HOH 315 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 220 1_555 ? ? ? ? ? ? ? 2.024 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 249 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 266 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 269 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc12 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 276 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 102 A HOH 317 1_555 ? ? ? ? ? ? ? 2.083 ? ? metalc14 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 103 A HOH 212 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc15 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 103 A HOH 221 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc16 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 103 A HOH 232 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc17 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 103 A HOH 258 4_556 ? ? ? ? ? ? ? 2.170 ? ? metalc18 metalc ? ? D MG . MG ? ? ? 1_555 E HOH . O ? ? A MG 103 A HOH 307 1_555 ? ? ? ? ? ? ? 2.145 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A C 46 N3 ? ? A G 1 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A C 46 O2 ? ? A G 1 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A C 46 N4 ? ? A G 1 A C 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 45 N3 ? ? A G 2 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 45 O2 ? ? A G 2 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 45 N4 ? ? A G 2 A C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A U 44 O2 ? ? A G 3 A U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A G 3 O6 ? ? ? 1_555 A U 44 N3 ? ? A G 3 A U 44 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 43 N3 ? ? A A 4 A U 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 43 O4 ? ? A A 4 A U 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N2 ? ? ? 1_555 A A 26 N3 ? ? A G 5 A A 26 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog12 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 5 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 5 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 5 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 27 N7 ? ? A U 6 A A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog16 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 27 N6 ? ? A U 6 A A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog17 hydrog ? ? A G 9 N2 ? ? ? 1_555 A A 26 N7 ? ? A G 9 A A 26 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog18 hydrog ? ? A G 9 N3 ? ? ? 1_555 A A 26 N6 ? ? A G 9 A A 26 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog19 hydrog ? ? A A 10 N6 ? ? ? 1_555 A G 25 N3 ? ? A A 10 A G 25 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog20 hydrog ? ? A A 10 N7 ? ? ? 1_555 A G 25 N2 ? ? A A 10 A G 25 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog21 hydrog ? ? A C 11 N3 ? ? ? 1_555 A G 24 N1 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A C 11 N4 ? ? ? 1_555 A G 24 O6 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 11 O2 ? ? ? 1_555 A G 24 N2 ? ? A C 11 A G 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 23 N1 ? ? A U 12 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 23 N6 ? ? A U 12 A A 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 22 N1 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 22 O6 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 22 N2 ? ? A C 13 A G 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 21 N3 ? ? A G 14 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 21 O2 ? ? A G 14 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 21 N4 ? ? A G 14 A C 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 20 N1 ? ? A C 15 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 20 O6 ? ? A C 15 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 20 N2 ? ? A C 15 A G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 16 N2 ? ? ? 1_555 A A 19 N7 ? ? A G 16 A A 19 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog36 hydrog ? ? A A 27 N1 ? ? ? 1_555 A U 40 N3 ? ? A A 27 A U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A A 27 N6 ? ? ? 1_555 A U 40 O4 ? ? A A 27 A U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 39 N1 ? ? A C 28 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 39 O6 ? ? A C 28 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 39 N2 ? ? A C 28 A G 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 29 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 29 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A U 29 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 29 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 37 N3 ? ? A G 30 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 37 O2 ? ? A G 30 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 37 N4 ? ? A G 30 A C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 36 N1 ? ? A C 31 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 36 O6 ? ? A C 31 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 36 N2 ? ? A C 31 A G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A G 32 N2 ? ? ? 1_555 A A 35 N7 ? ? A G 32 A A 35 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A G 9 ? A G 9 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 212 ? 1_555 102.4 ? 2 OP1 ? A G 9 ? A G 9 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 83.8 ? 3 O ? E HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 221 ? 1_555 106.4 ? 4 OP1 ? A G 9 ? A G 9 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 73.3 ? 5 O ? E HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 163.2 ? 6 O ? E HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 232 ? 1_555 89.4 ? 7 OP1 ? A G 9 ? A G 9 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 258 ? 4_556 160.7 ? 8 O ? E HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 258 ? 4_556 96.5 ? 9 O ? E HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 258 ? 4_556 95.0 ? 10 O ? E HOH . ? A HOH 232 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 258 ? 4_556 87.4 ? 11 OP1 ? A G 9 ? A G 9 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 307 ? 1_555 89.2 ? 12 O ? E HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 307 ? 1_555 83.1 ? 13 O ? E HOH . ? A HOH 221 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 307 ? 1_555 169.2 ? 14 O ? E HOH . ? A HOH 232 ? 1_555 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 307 ? 1_555 80.7 ? 15 O ? E HOH . ? A HOH 258 ? 4_556 MG ? D MG . ? A MG 103 ? 1_555 O ? E HOH . ? A HOH 307 ? 1_555 88.9 ? 16 O ? E HOH . ? A HOH 229 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 240 ? 1_555 82.3 ? 17 O ? E HOH . ? A HOH 229 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 242 ? 1_555 90.9 ? 18 O ? E HOH . ? A HOH 240 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 242 ? 1_555 84.2 ? 19 O ? E HOH . ? A HOH 229 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 259 ? 1_555 97.9 ? 20 O ? E HOH . ? A HOH 240 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 259 ? 1_555 95.3 ? 21 O ? E HOH . ? A HOH 242 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 259 ? 1_555 171.1 ? 22 O ? E HOH . ? A HOH 229 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 313 ? 1_555 171.7 ? 23 O ? E HOH . ? A HOH 240 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 313 ? 1_555 90.6 ? 24 O ? E HOH . ? A HOH 242 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 313 ? 1_555 84.1 ? 25 O ? E HOH . ? A HOH 259 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 313 ? 1_555 87.0 ? 26 O ? E HOH . ? A HOH 229 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 92.2 ? 27 O ? E HOH . ? A HOH 240 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 171.2 ? 28 O ? E HOH . ? A HOH 242 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 89.0 ? 29 O ? E HOH . ? A HOH 259 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 92.3 ? 30 O ? E HOH . ? A HOH 313 ? 1_555 MG ? B MG . ? A MG 101 ? 1_555 O ? E HOH . ? A HOH 315 ? 1_555 94.3 ? 31 O ? E HOH . ? A HOH 220 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 249 ? 1_555 103.0 ? 32 O ? E HOH . ? A HOH 220 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 266 ? 1_555 97.1 ? 33 O ? E HOH . ? A HOH 249 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 266 ? 1_555 159.4 ? 34 O ? E HOH . ? A HOH 220 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 92.6 ? 35 O ? E HOH . ? A HOH 249 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 89.0 ? 36 O ? E HOH . ? A HOH 266 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 269 ? 1_555 94.7 ? 37 O ? E HOH . ? A HOH 220 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 276 ? 1_555 98.8 ? 38 O ? E HOH . ? A HOH 249 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 276 ? 1_555 83.5 ? 39 O ? E HOH . ? A HOH 266 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 276 ? 1_555 89.0 ? 40 O ? E HOH . ? A HOH 269 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 276 ? 1_555 167.5 ? 41 O ? E HOH . ? A HOH 220 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 317 ? 1_555 174.6 ? 42 O ? E HOH . ? A HOH 249 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 317 ? 1_555 76.3 ? 43 O ? E HOH . ? A HOH 266 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 317 ? 1_555 84.1 ? 44 O ? E HOH . ? A HOH 269 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 317 ? 1_555 82.0 ? 45 O ? E HOH . ? A HOH 276 ? 1_555 MG ? C MG . ? A MG 102 ? 1_555 O ? E HOH . ? A HOH 317 ? 1_555 86.5 ? # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 19.1012207713 -33.9631584267 16.7498405149 0.240696030211 ? 0.00745560113295 ? -0.039029811143 ? 0.306325659553 ? 0.0110232493102 ? 0.289390631458 ? 1.44995607372 ? 0.334096286058 ? -0.0696473983583 ? 2.50797032054 ? -0.893484926858 ? 2.94702625063 ? -0.017682357713 ? -0.523090723066 ? 0.0782905228773 ? 0.310830978845 ? -0.393933781185 ? -0.83219401123 ? 0.0624490836137 ? 0.774843504868 ? 0.357474264179 ? 2 'X-RAY DIFFRACTION' ? refined 22.4873328911 -23.3277078282 12.5690613829 0.379375805209 ? -0.0928100750264 ? -0.00562502053676 ? 0.500694882061 ? -0.0386979159021 ? 0.433566346792 ? 1.94197002622 ? 0.286589971853 ? 0.112723680716 ? 0.267170599545 ? 0.718063808604 ? 3.00680202635 ? 0.355089474214 ? -0.324391478927 ? -0.057334249301 ? 0.0371376785287 ? 0.0379709017486 ? -0.357531779254 ? -0.0804813287097 ? -0.10324313416 ? -0.375869606688 ? 3 'X-RAY DIFFRACTION' ? refined 11.4685576727 -28.4550424627 5.72505098521 0.268821529368 ? -0.00774519946207 ? -0.0190670225779 ? 0.305046660911 ? 0.00688536940241 ? 0.294405983007 ? 0.461666068392 ? -0.16456899708 ? -0.224129260201 ? 0.441317332988 ? 0.318887458131 ? 1.25800255804 ? 0.00591731495398 ? -0.0339169590235 ? 0.0895530809861 ? -0.0604257623589 ? -0.00431884791631 ? -0.00380593385834 ? 0.00522041053709 ? 0.255686704965 ? 0.0127955505008 ? 4 'X-RAY DIFFRACTION' ? refined 6.60938196926 -36.5283182392 18.9704349435 0.26907351516 ? -0.00234185337989 ? -0.00205784592635 ? 0.246668161792 ? -0.00959179548061 ? 0.311405907204 ? 0.449647045505 ? -0.163710405592 ? 0.375085232944 ? 0.236702457359 ? -0.555321145364 ? 1.2279521307 ? 0.0241887396885 ? -0.0491932175942 ? 0.0055919096129 ? -0.0173222971656 ? 0.0213680646247 ? 0.0729754705093 ? 0.131287711224 ? -0.0192887906463 ? -0.0452653210526 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A ? A 41 ? A ? A 45 ? ? ;chain 'A' and (resid 41 through 45 ) ; 2 'X-RAY DIFFRACTION' 2 A ? A 46 ? A ? A 46 ? ? ;chain 'A' and (resid 46 through 46 ) ; 3 'X-RAY DIFFRACTION' 3 A ? A 1 ? A ? A 20 ? ? ;chain 'A' and (resid 1 through 20 ) ; 4 'X-RAY DIFFRACTION' 4 A ? A 21 ? A ? A 40 ? ? ;chain 'A' and (resid 21 through 40 ) ; # _pdbx_entry_details.entry_id 8ITS _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 HOH O O N N 111 HOH H1 H N N 112 HOH H2 H N N 113 MG MG MG N N 114 U OP3 O N N 115 U P P N N 116 U OP1 O N N 117 U OP2 O N N 118 U "O5'" O N N 119 U "C5'" C N N 120 U "C4'" C N R 121 U "O4'" O N N 122 U "C3'" C N S 123 U "O3'" O N N 124 U "C2'" C N R 125 U "O2'" O N N 126 U "C1'" C N R 127 U N1 N N N 128 U C2 C N N 129 U O2 O N N 130 U N3 N N N 131 U C4 C N N 132 U O4 O N N 133 U C5 C N N 134 U C6 C N N 135 U HOP3 H N N 136 U HOP2 H N N 137 U "H5'" H N N 138 U "H5''" H N N 139 U "H4'" H N N 140 U "H3'" H N N 141 U "HO3'" H N N 142 U "H2'" H N N 143 U "HO2'" H N N 144 U "H1'" H N N 145 U H3 H N N 146 U H5 H N N 147 U H6 H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 HOH O H1 sing N N 116 HOH O H2 sing N N 117 U OP3 P sing N N 118 U OP3 HOP3 sing N N 119 U P OP1 doub N N 120 U P OP2 sing N N 121 U P "O5'" sing N N 122 U OP2 HOP2 sing N N 123 U "O5'" "C5'" sing N N 124 U "C5'" "C4'" sing N N 125 U "C5'" "H5'" sing N N 126 U "C5'" "H5''" sing N N 127 U "C4'" "O4'" sing N N 128 U "C4'" "C3'" sing N N 129 U "C4'" "H4'" sing N N 130 U "O4'" "C1'" sing N N 131 U "C3'" "O3'" sing N N 132 U "C3'" "C2'" sing N N 133 U "C3'" "H3'" sing N N 134 U "O3'" "HO3'" sing N N 135 U "C2'" "O2'" sing N N 136 U "C2'" "C1'" sing N N 137 U "C2'" "H2'" sing N N 138 U "O2'" "HO2'" sing N N 139 U "C1'" N1 sing N N 140 U "C1'" "H1'" sing N N 141 U N1 C2 sing N N 142 U N1 C6 sing N N 143 U C2 O2 doub N N 144 U C2 N3 sing N N 145 U N3 C4 sing N N 146 U N3 H3 sing N N 147 U C4 O4 doub N N 148 U C4 C5 sing N N 149 U C5 C6 doub N N 150 U C5 H5 sing N N 151 U C6 H6 sing N N 152 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8ITS 'double helix' 8ITS 'a-form double helix' 8ITS 'mismatched base pair' 8ITS 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A C 46 1_555 -1.091 -0.305 -0.127 -8.535 -6.185 -1.666 1 A_G1:C46_A A 1 ? A 46 ? 19 1 1 A G 2 1_555 A C 45 1_555 -0.060 -0.199 -0.257 -8.100 -14.151 -3.410 2 A_G2:C45_A A 2 ? A 45 ? 19 1 1 A G 3 1_555 A U 44 1_555 -2.249 -0.625 -0.074 -4.717 -11.311 -1.423 3 A_G3:U44_A A 3 ? A 44 ? 28 1 1 A A 4 1_555 A U 43 1_555 0.144 -0.045 0.392 -0.375 -9.739 5.854 4 A_A4:U43_A A 4 ? A 43 ? 20 1 1 A G 5 1_555 A C 42 1_555 -0.298 -0.030 0.052 -13.453 -24.345 1.662 5 A_G5:C42_A A 5 ? A 42 ? 19 1 1 A A 27 1_555 A U 40 1_555 -0.146 0.005 -0.495 -6.980 8.448 12.080 6 A_A27:U40_A A 27 ? A 40 ? 20 1 1 A C 28 1_555 A G 39 1_555 0.118 -0.117 -0.187 -4.505 -9.951 2.416 7 A_C28:G39_A A 28 ? A 39 ? 19 1 1 A U 29 1_555 A A 38 1_555 -0.356 0.048 0.444 -4.574 -11.061 5.689 8 A_U29:A38_A A 29 ? A 38 ? 20 1 1 A G 30 1_555 A C 37 1_555 -0.271 -0.218 -0.020 -1.244 -10.324 0.960 9 A_G30:C37_A A 30 ? A 37 ? 19 1 1 A C 31 1_555 A G 36 1_555 0.579 -0.133 -0.021 -0.845 -2.597 1.803 10 A_C31:G36_A A 31 ? A 36 ? 19 1 1 A G 32 1_555 A A 35 1_555 7.080 -5.181 1.167 23.242 7.180 -14.524 11 A_G32:A35_A A 32 ? A 35 ? ? ? 1 A G 9 1_555 A A 26 1_555 6.655 -4.117 -0.293 -19.337 3.303 2.265 12 A_G9:A26_A A 9 ? A 26 ? 11 5 1 A A 10 1_555 A G 25 1_555 -6.863 -4.670 0.364 5.955 -14.198 -13.153 13 A_A10:G25_A A 10 ? A 25 ? 11 10 1 A C 11 1_555 A G 24 1_555 0.293 -0.113 -0.244 9.094 -16.283 1.668 14 A_C11:G24_A A 11 ? A 24 ? 19 1 1 A U 12 1_555 A A 23 1_555 -0.144 0.044 0.065 2.185 -12.624 0.157 15 A_U12:A23_A A 12 ? A 23 ? 20 1 1 A C 13 1_555 A G 22 1_555 0.278 -0.130 -0.049 6.921 -11.535 1.346 16 A_C13:G22_A A 13 ? A 22 ? 19 1 1 A G 14 1_555 A C 21 1_555 -0.239 -0.177 -0.434 -4.685 -7.562 2.712 17 A_G14:C21_A A 14 ? A 21 ? 19 1 1 A C 15 1_555 A G 20 1_555 0.294 -0.299 -0.096 0.101 7.073 -4.239 18 A_C15:G20_A A 15 ? A 20 ? 19 1 1 A G 16 1_555 A A 19 1_555 6.998 -5.106 1.093 24.870 13.008 -10.624 19 A_G16:A19_A A 16 ? A 19 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A C 46 1_555 A G 2 1_555 A C 45 1_555 -0.123 -1.484 3.314 -0.791 11.291 35.930 -3.696 0.093 2.742 17.768 1.245 37.614 1 AA_G1G2:C45C46_AA A 1 ? A 46 ? A 2 ? A 45 ? 1 A G 2 1_555 A C 45 1_555 A G 3 1_555 A U 44 1_555 0.965 -2.082 3.006 0.262 10.651 22.657 -7.286 -2.168 1.863 25.385 -0.625 25.007 2 AA_G2G3:U44C45_AA A 2 ? A 45 ? A 3 ? A 44 ? 1 A G 3 1_555 A U 44 1_555 A A 4 1_555 A U 43 1_555 0.538 -1.393 3.155 -3.281 0.708 39.875 -2.113 -1.145 3.079 1.036 4.800 40.011 3 AA_G3A4:U43U44_AA A 3 ? A 44 ? A 4 ? A 43 ? 1 A A 4 1_555 A U 43 1_555 A G 5 1_555 A C 42 1_555 -0.183 -1.759 3.572 4.849 4.116 32.590 -3.809 1.180 3.272 7.248 -8.540 33.189 4 AA_A4G5:C42U43_AA A 4 ? A 43 ? A 5 ? A 42 ? 1 A G 5 1_555 A C 42 1_555 A A 27 1_555 A U 40 1_555 -0.818 -3.158 2.943 13.700 13.575 91.072 -2.397 0.781 2.450 9.426 -9.512 92.651 5 AA_G5A27:U40C42_AA A 5 ? A 42 ? A 27 ? A 40 ? 1 A A 27 1_555 A U 40 1_555 A C 28 1_555 A G 39 1_555 -1.139 -0.971 3.229 -2.385 6.598 29.742 -3.114 1.704 3.029 12.633 4.567 30.540 6 AA_A27C28:G39U40_AA A 27 ? A 40 ? A 28 ? A 39 ? 1 A C 28 1_555 A G 39 1_555 A U 29 1_555 A A 38 1_555 0.463 -1.575 3.223 -1.868 13.724 29.272 -4.968 -1.123 2.246 25.439 3.462 32.318 7 AA_C28U29:A38G39_AA A 28 ? A 39 ? A 29 ? A 38 ? 1 A U 29 1_555 A A 38 1_555 A G 30 1_555 A C 37 1_555 0.404 -1.708 2.956 3.585 16.607 27.882 -5.294 -0.236 1.730 31.081 -6.709 32.563 8 AA_U29G30:C37A38_AA A 29 ? A 38 ? A 30 ? A 37 ? 1 A G 30 1_555 A C 37 1_555 A C 31 1_555 A G 36 1_555 0.236 -1.633 3.263 0.773 8.636 37.556 -3.488 -0.268 2.837 13.199 -1.181 38.508 9 AA_G30C31:G36C37_AA A 30 ? A 37 ? A 31 ? A 36 ? 1 A C 31 1_555 A G 36 1_555 A G 32 1_555 A A 35 1_555 -2.287 -0.963 2.561 -6.494 6.826 49.044 -1.544 2.329 2.677 8.136 7.740 49.885 10 AA_C31G32:A35G36_AA A 31 ? A 36 ? A 32 ? A 35 ? 1 A G 9 1_555 A A 26 1_555 A A 10 1_555 A G 25 1_555 -1.037 -0.304 3.095 -6.208 0.291 -29.641 0.528 -3.134 2.827 -0.561 -11.968 -30.271 11 AA_G9A10:G25A26_AA A 9 ? A 26 ? A 10 ? A 25 ? 1 A A 10 1_555 A G 25 1_555 A C 11 1_555 A G 24 1_555 1.393 -0.754 3.362 -0.064 11.400 63.729 -1.192 -1.305 3.199 10.707 0.060 64.635 12 AA_A10C11:G24G25_AA A 10 ? A 25 ? A 11 ? A 24 ? 1 A C 11 1_555 A G 24 1_555 A U 12 1_555 A A 23 1_555 -1.059 -2.137 3.361 -6.376 13.611 26.826 -6.491 0.853 2.232 26.829 12.568 30.682 13 AA_C11U12:A23G24_AA A 11 ? A 24 ? A 12 ? A 23 ? 1 A U 12 1_555 A A 23 1_555 A C 13 1_555 A G 22 1_555 -0.035 -1.172 3.046 0.338 10.002 34.591 -3.157 0.100 2.617 16.401 -0.554 35.967 14 AA_U12C13:G22A23_AA A 12 ? A 23 ? A 13 ? A 22 ? 1 A C 13 1_555 A G 22 1_555 A G 14 1_555 A C 21 1_555 0.300 -1.567 3.413 1.153 15.780 30.639 -4.958 -0.339 2.357 27.669 -2.022 34.396 15 AA_C13G14:C21G22_AA A 13 ? A 22 ? A 14 ? A 21 ? 1 A G 14 1_555 A C 21 1_555 A C 15 1_555 A G 20 1_555 -0.600 -1.704 3.215 -3.204 8.356 34.580 -3.909 0.546 2.784 13.773 5.282 35.685 16 AA_G14C15:G20C21_AA A 14 ? A 21 ? A 15 ? A 20 ? 1 A C 15 1_555 A G 20 1_555 A G 16 1_555 A A 19 1_555 -1.638 -1.202 2.514 -6.249 7.802 50.330 -1.805 1.561 2.488 9.071 7.265 51.250 17 AA_C15G16:A19G20_AA A 15 ? A 20 ? A 16 ? A 19 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China (NSFC)' China 32171191 1 'Cancer Research UK' 'United Kingdom' A18604 2 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details RNAComposer # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 8ITS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.012572 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.009077 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025820 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024767 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? ? ? ? ? ? ? ? ? ? ? ? MG2+ ? ? 9.95820 ? ? ? 3.10187 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_