data_8IV8 # _entry.id 8IV8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8IV8 pdb_00008iv8 10.2210/pdb8iv8/pdb WWPDB D_1300036547 ? ? EMDB EMD-35746 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-08-16 2 'Structure model' 1 1 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 2 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8IV8 _pdbx_database_status.recvd_initial_deposition_date 2023-03-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)' _pdbx_database_related.db_id EMD-35746 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email abing0811@xmu.edu.cn _pdbx_contact_author.name_first Qingbing _pdbx_contact_author.name_last Zheng _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7516-9965 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Sun, H.' 1 ? 'Jiang, Y.' 2 ? 'Zheng, Q.' 3 ? 'Li, S.' 4 ? 'Xia, N.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country CN _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Cell' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1674-8018 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 121 _citation.page_last 134 _citation.title 'Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/procel/pwad040 _citation.pdbx_database_id_PubMed 37470320 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sun, H.' 1 ? primary 'Deng, T.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Lin, Y.' 4 ? primary 'Jiang, Y.' 5 ? primary 'Jiang, Y.' 6 ? primary 'Huang, Y.' 7 ? primary 'Song, S.' 8 ? primary 'Cui, L.' 9 ? primary 'Li, T.' 10 ? primary 'Xiong, H.' 11 ? primary 'Lan, M.' 12 ? primary 'Liu, L.' 13 ? primary 'Li, Y.' 14 ? primary 'Fang, Q.' 15 ? primary 'Yu, K.' 16 ? primary 'Jiang, W.' 17 ? primary 'Zhou, L.' 18 ? primary 'Que, Y.' 19 ? primary 'Zhang, T.' 20 ? primary 'Yuan, Q.' 21 ? primary 'Cheng, T.' 22 ? primary 'Zhang, Z.' 23 ? primary 'Yu, H.' 24 ? primary 'Zhang, J.' 25 ? primary 'Luo, W.' 26 ? primary 'Li, S.' 27 ? primary 'Zheng, Q.' 28 ? primary 'Gu, Y.' 29 ? primary 'Xia, N.' 30 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'light chain of 3E2' 11203.357 1 ? ? ? ? 2 polymer nat 'heavy chain of 3E2' 13105.676 1 ? ? ? ? 3 polymer man 'Spike protein S1' 22930.721 1 ? ? ? ? 4 polymer nat 'light chain of 1C4' 11642.854 1 ? ? ? ? 5 polymer nat 'heavy chain of 1C4' 13384.900 1 ? ? ? ? 6 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAE DAAYYYCHQWSSWTFGGGTKLEIK ; ;QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAE DAAYYYCHQWSSWTFGGGTKLEIK ; L ? 2 'polypeptide(L)' no no ;EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLY LQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS ; ;EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLY LQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS ; H ? 3 'polypeptide(L)' no no ;ESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIR GDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGV EGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; ;ESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIR GDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGV EGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; G ? 4 'polypeptide(L)' no no ;DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET EDFGMYFCQQSNTWPLTCGSGTKLELN ; ;DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET EDFGMYFCQQSNTWPLTCGSGTKLELN ; D ? 5 'polypeptide(L)' no no ;QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAY LKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS ; ;QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAY LKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ILE n 1 3 VAL n 1 4 LEU n 1 5 THR n 1 6 GLN n 1 7 SER n 1 8 PRO n 1 9 ALA n 1 10 ILE n 1 11 MET n 1 12 SER n 1 13 ALA n 1 14 SER n 1 15 LEU n 1 16 GLY n 1 17 GLU n 1 18 GLU n 1 19 ILE n 1 20 THR n 1 21 LEU n 1 22 THR n 1 23 CYS n 1 24 SER n 1 25 VAL n 1 26 SER n 1 27 SER n 1 28 SER n 1 29 VAL n 1 30 SER n 1 31 ASP n 1 32 MET n 1 33 HIS n 1 34 TRP n 1 35 TYR n 1 36 GLN n 1 37 GLN n 1 38 LYS n 1 39 SER n 1 40 GLY n 1 41 THR n 1 42 SER n 1 43 PRO n 1 44 LYS n 1 45 VAL n 1 46 PHE n 1 47 ILE n 1 48 TYR n 1 49 SER n 1 50 THR n 1 51 SER n 1 52 ASN n 1 53 LEU n 1 54 ALA n 1 55 SER n 1 56 GLY n 1 57 VAL n 1 58 PRO n 1 59 SER n 1 60 ARG n 1 61 PHE n 1 62 SER n 1 63 GLY n 1 64 SER n 1 65 GLY n 1 66 SER n 1 67 GLY n 1 68 THR n 1 69 PHE n 1 70 TYR n 1 71 SER n 1 72 LEU n 1 73 THR n 1 74 ILE n 1 75 SER n 1 76 SER n 1 77 VAL n 1 78 GLU n 1 79 ALA n 1 80 GLU n 1 81 ASP n 1 82 ALA n 1 83 ALA n 1 84 TYR n 1 85 TYR n 1 86 TYR n 1 87 CYS n 1 88 HIS n 1 89 GLN n 1 90 TRP n 1 91 SER n 1 92 SER n 1 93 TRP n 1 94 THR n 1 95 PHE n 1 96 GLY n 1 97 GLY n 1 98 GLY n 1 99 THR n 1 100 LYS n 1 101 LEU n 1 102 GLU n 1 103 ILE n 1 104 LYS n 2 1 GLU n 2 2 VAL n 2 3 MET n 2 4 LEU n 2 5 VAL n 2 6 GLU n 2 7 SER n 2 8 GLY n 2 9 GLY n 2 10 GLY n 2 11 VAL n 2 12 VAL n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 GLY n 2 17 SER n 2 18 LEU n 2 19 LYS n 2 20 LEU n 2 21 SER n 2 22 CYS n 2 23 ALA n 2 24 ALA n 2 25 SER n 2 26 GLY n 2 27 PHE n 2 28 SER n 2 29 PHE n 2 30 SER n 2 31 THR n 2 32 TYR n 2 33 ALA n 2 34 MET n 2 35 SER n 2 36 TRP n 2 37 ILE n 2 38 ARG n 2 39 GLN n 2 40 THR n 2 41 PRO n 2 42 GLU n 2 43 LYS n 2 44 SER n 2 45 LEU n 2 46 GLU n 2 47 TRP n 2 48 VAL n 2 49 ALA n 2 50 ALA n 2 51 ILE n 2 52 SER n 2 53 SER n 2 54 GLY n 2 55 GLY n 2 56 THR n 2 57 ASN n 2 58 THR n 2 59 TYR n 2 60 TYR n 2 61 PRO n 2 62 GLY n 2 63 SER n 2 64 VAL n 2 65 LYS n 2 66 GLY n 2 67 ARG n 2 68 PHE n 2 69 THR n 2 70 ILE n 2 71 SER n 2 72 ARG n 2 73 ASP n 2 74 LYS n 2 75 ALA n 2 76 MET n 2 77 ASN n 2 78 THR n 2 79 LEU n 2 80 TYR n 2 81 LEU n 2 82 GLN n 2 83 LEU n 2 84 SER n 2 85 SER n 2 86 LEU n 2 87 ARG n 2 88 SER n 2 89 GLU n 2 90 ASP n 2 91 THR n 2 92 ALA n 2 93 MET n 2 94 TYR n 2 95 TYR n 2 96 CYS n 2 97 VAL n 2 98 ARG n 2 99 HIS n 2 100 SER n 2 101 GLY n 2 102 ASN n 2 103 TYR n 2 104 VAL n 2 105 ASP n 2 106 SER n 2 107 VAL n 2 108 MET n 2 109 ASP n 2 110 TYR n 2 111 TRP n 2 112 GLY n 2 113 GLN n 2 114 GLY n 2 115 THR n 2 116 SER n 2 117 VAL n 2 118 THR n 2 119 VAL n 2 120 SER n 2 121 SER n 3 1 GLU n 3 2 SER n 3 3 ILE n 3 4 VAL n 3 5 ARG n 3 6 PHE n 3 7 PRO n 3 8 ASN n 3 9 ILE n 3 10 THR n 3 11 ASN n 3 12 LEU n 3 13 CYS n 3 14 PRO n 3 15 PHE n 3 16 GLY n 3 17 GLU n 3 18 VAL n 3 19 PHE n 3 20 ASN n 3 21 ALA n 3 22 THR n 3 23 ARG n 3 24 PHE n 3 25 ALA n 3 26 SER n 3 27 VAL n 3 28 TYR n 3 29 ALA n 3 30 TRP n 3 31 ASN n 3 32 ARG n 3 33 LYS n 3 34 ARG n 3 35 ILE n 3 36 SER n 3 37 ASN n 3 38 CYS n 3 39 VAL n 3 40 ALA n 3 41 ASP n 3 42 TYR n 3 43 SER n 3 44 VAL n 3 45 LEU n 3 46 TYR n 3 47 ASN n 3 48 SER n 3 49 ALA n 3 50 SER n 3 51 PHE n 3 52 SER n 3 53 THR n 3 54 PHE n 3 55 LYS n 3 56 CYS n 3 57 TYR n 3 58 GLY n 3 59 VAL n 3 60 SER n 3 61 PRO n 3 62 THR n 3 63 LYS n 3 64 LEU n 3 65 ASN n 3 66 ASP n 3 67 LEU n 3 68 CYS n 3 69 PHE n 3 70 THR n 3 71 ASN n 3 72 VAL n 3 73 TYR n 3 74 ALA n 3 75 ASP n 3 76 SER n 3 77 PHE n 3 78 VAL n 3 79 ILE n 3 80 ARG n 3 81 GLY n 3 82 ASP n 3 83 GLU n 3 84 VAL n 3 85 ARG n 3 86 GLN n 3 87 ILE n 3 88 ALA n 3 89 PRO n 3 90 GLY n 3 91 GLN n 3 92 THR n 3 93 GLY n 3 94 LYS n 3 95 ILE n 3 96 ALA n 3 97 ASP n 3 98 TYR n 3 99 ASN n 3 100 TYR n 3 101 LYS n 3 102 LEU n 3 103 PRO n 3 104 ASP n 3 105 ASP n 3 106 PHE n 3 107 THR n 3 108 GLY n 3 109 CYS n 3 110 VAL n 3 111 ILE n 3 112 ALA n 3 113 TRP n 3 114 ASN n 3 115 SER n 3 116 ASN n 3 117 ASN n 3 118 LEU n 3 119 ASP n 3 120 SER n 3 121 LYS n 3 122 VAL n 3 123 GLY n 3 124 GLY n 3 125 ASN n 3 126 TYR n 3 127 ASN n 3 128 TYR n 3 129 LEU n 3 130 TYR n 3 131 ARG n 3 132 LEU n 3 133 PHE n 3 134 ARG n 3 135 LYS n 3 136 SER n 3 137 ASN n 3 138 LEU n 3 139 LYS n 3 140 PRO n 3 141 PHE n 3 142 GLU n 3 143 ARG n 3 144 ASP n 3 145 ILE n 3 146 SER n 3 147 THR n 3 148 GLU n 3 149 ILE n 3 150 TYR n 3 151 GLN n 3 152 ALA n 3 153 GLY n 3 154 SER n 3 155 THR n 3 156 PRO n 3 157 CYS n 3 158 ASN n 3 159 GLY n 3 160 VAL n 3 161 GLU n 3 162 GLY n 3 163 PHE n 3 164 ASN n 3 165 CYS n 3 166 TYR n 3 167 PHE n 3 168 PRO n 3 169 LEU n 3 170 GLN n 3 171 SER n 3 172 TYR n 3 173 GLY n 3 174 PHE n 3 175 GLN n 3 176 PRO n 3 177 THR n 3 178 ASN n 3 179 GLY n 3 180 VAL n 3 181 GLY n 3 182 TYR n 3 183 GLN n 3 184 PRO n 3 185 TYR n 3 186 ARG n 3 187 VAL n 3 188 VAL n 3 189 VAL n 3 190 LEU n 3 191 SER n 3 192 PHE n 3 193 GLU n 3 194 LEU n 3 195 LEU n 3 196 HIS n 3 197 ALA n 3 198 PRO n 3 199 ALA n 3 200 THR n 3 201 VAL n 3 202 CYS n 3 203 GLY n 3 204 PRO n 4 1 ASP n 4 2 ILE n 4 3 VAL n 4 4 LEU n 4 5 THR n 4 6 GLN n 4 7 SER n 4 8 PRO n 4 9 ALA n 4 10 THR n 4 11 LEU n 4 12 SER n 4 13 VAL n 4 14 THR n 4 15 PRO n 4 16 GLY n 4 17 ASP n 4 18 ASN n 4 19 VAL n 4 20 SER n 4 21 LEU n 4 22 SER n 4 23 CYS n 4 24 ARG n 4 25 ALA n 4 26 SER n 4 27 GLN n 4 28 ILE n 4 29 ILE n 4 30 SER n 4 31 ASN n 4 32 ASN n 4 33 LEU n 4 34 HIS n 4 35 TRP n 4 36 TYR n 4 37 GLN n 4 38 GLN n 4 39 LYS n 4 40 SER n 4 41 HIS n 4 42 GLU n 4 43 SER n 4 44 PRO n 4 45 ARG n 4 46 LEU n 4 47 LEU n 4 48 ILE n 4 49 LYS n 4 50 TYR n 4 51 ALA n 4 52 SER n 4 53 GLN n 4 54 SER n 4 55 ILE n 4 56 SER n 4 57 GLY n 4 58 ILE n 4 59 PRO n 4 60 SER n 4 61 ARG n 4 62 PHE n 4 63 SER n 4 64 GLY n 4 65 SER n 4 66 GLY n 4 67 SER n 4 68 GLY n 4 69 THR n 4 70 ASP n 4 71 PHE n 4 72 THR n 4 73 LEU n 4 74 SER n 4 75 ILE n 4 76 ASN n 4 77 SER n 4 78 VAL n 4 79 GLU n 4 80 THR n 4 81 GLU n 4 82 ASP n 4 83 PHE n 4 84 GLY n 4 85 MET n 4 86 TYR n 4 87 PHE n 4 88 CYS n 4 89 GLN n 4 90 GLN n 4 91 SER n 4 92 ASN n 4 93 THR n 4 94 TRP n 4 95 PRO n 4 96 LEU n 4 97 THR n 4 98 CYS n 4 99 GLY n 4 100 SER n 4 101 GLY n 4 102 THR n 4 103 LYS n 4 104 LEU n 4 105 GLU n 4 106 LEU n 4 107 ASN n 5 1 GLN n 5 2 ILE n 5 3 GLN n 5 4 LEU n 5 5 VAL n 5 6 GLN n 5 7 SER n 5 8 GLY n 5 9 PRO n 5 10 GLU n 5 11 LEU n 5 12 LYS n 5 13 LYS n 5 14 PRO n 5 15 GLY n 5 16 GLU n 5 17 THR n 5 18 VAL n 5 19 LYS n 5 20 ILE n 5 21 SER n 5 22 CYS n 5 23 LYS n 5 24 ALA n 5 25 SER n 5 26 GLY n 5 27 TYR n 5 28 THR n 5 29 PHE n 5 30 THR n 5 31 ASP n 5 32 TYR n 5 33 GLY n 5 34 LEU n 5 35 ASN n 5 36 TRP n 5 37 VAL n 5 38 LYS n 5 39 GLN n 5 40 ALA n 5 41 PRO n 5 42 GLY n 5 43 LYS n 5 44 GLY n 5 45 LEU n 5 46 LYS n 5 47 TRP n 5 48 MET n 5 49 GLY n 5 50 TRP n 5 51 ILE n 5 52 ASN n 5 53 THR n 5 54 TYR n 5 55 SER n 5 56 GLY n 5 57 GLU n 5 58 PRO n 5 59 THR n 5 60 TYR n 5 61 ASN n 5 62 ASP n 5 63 GLU n 5 64 PHE n 5 65 ARG n 5 66 GLY n 5 67 ARG n 5 68 PHE n 5 69 ALA n 5 70 PHE n 5 71 SER n 5 72 LEU n 5 73 GLU n 5 74 THR n 5 75 SER n 5 76 THR n 5 77 ILE n 5 78 THR n 5 79 ALA n 5 80 TYR n 5 81 LEU n 5 82 LYS n 5 83 ILE n 5 84 ASN n 5 85 ASN n 5 86 LEU n 5 87 LYS n 5 88 ASN n 5 89 GLU n 5 90 ASP n 5 91 THR n 5 92 ALA n 5 93 THR n 5 94 TYR n 5 95 PHE n 5 96 CYS n 5 97 ALA n 5 98 ARG n 5 99 GLY n 5 100 GLY n 5 101 ASN n 5 102 TRP n 5 103 ASP n 5 104 TRP n 5 105 TYR n 5 106 PHE n 5 107 ASP n 5 108 VAL n 5 109 TRP n 5 110 GLY n 5 111 ALA n 5 112 GLY n 5 113 THR n 5 114 THR n 5 115 VAL n 5 116 THR n 5 117 VAL n 5 118 SER n 5 119 SER n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 204 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'S, 2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Severe acute respiratory syndrome coronavirus 2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2697049 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Expi293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample 1 104 ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 1 121 ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample 1 107 ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 sample 1 119 ? 'Mus musculus' 10090 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_branch.entity_id 6 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 6 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 6 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 6 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 6 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 6 3 BMA C1 O1 2 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 1 1 GLN GLN L . n A 1 2 ILE 2 2 2 ILE ILE L . n A 1 3 VAL 3 3 3 VAL VAL L . n A 1 4 LEU 4 4 4 LEU LEU L . n A 1 5 THR 5 5 5 THR THR L . n A 1 6 GLN 6 6 6 GLN GLN L . n A 1 7 SER 7 7 7 SER SER L . n A 1 8 PRO 8 8 8 PRO PRO L . n A 1 9 ALA 9 9 9 ALA ALA L . n A 1 10 ILE 10 10 10 ILE ILE L . n A 1 11 MET 11 11 11 MET MET L . n A 1 12 SER 12 12 12 SER SER L . n A 1 13 ALA 13 13 13 ALA ALA L . n A 1 14 SER 14 14 14 SER SER L . n A 1 15 LEU 15 15 15 LEU LEU L . n A 1 16 GLY 16 16 16 GLY GLY L . n A 1 17 GLU 17 17 17 GLU GLU L . n A 1 18 GLU 18 18 18 GLU GLU L . n A 1 19 ILE 19 19 19 ILE ILE L . n A 1 20 THR 20 20 20 THR THR L . n A 1 21 LEU 21 21 21 LEU LEU L . n A 1 22 THR 22 22 22 THR THR L . n A 1 23 CYS 23 23 23 CYS CYS L . n A 1 24 SER 24 24 24 SER SER L . n A 1 25 VAL 25 25 25 VAL VAL L . n A 1 26 SER 26 26 26 SER SER L . n A 1 27 SER 27 27 27 SER SER L . n A 1 28 SER 28 28 28 SER SER L . n A 1 29 VAL 29 29 29 VAL VAL L . n A 1 30 SER 30 30 30 SER SER L . n A 1 31 ASP 31 31 31 ASP ASP L . n A 1 32 MET 32 32 32 MET MET L . n A 1 33 HIS 33 33 33 HIS HIS L . n A 1 34 TRP 34 34 34 TRP TRP L . n A 1 35 TYR 35 35 35 TYR TYR L . n A 1 36 GLN 36 36 36 GLN GLN L . n A 1 37 GLN 37 37 37 GLN GLN L . n A 1 38 LYS 38 38 38 LYS LYS L . n A 1 39 SER 39 39 39 SER SER L . n A 1 40 GLY 40 40 40 GLY GLY L . n A 1 41 THR 41 41 41 THR THR L . n A 1 42 SER 42 42 42 SER SER L . n A 1 43 PRO 43 43 43 PRO PRO L . n A 1 44 LYS 44 44 44 LYS LYS L . n A 1 45 VAL 45 45 45 VAL VAL L . n A 1 46 PHE 46 46 46 PHE PHE L . n A 1 47 ILE 47 47 47 ILE ILE L . n A 1 48 TYR 48 48 48 TYR TYR L . n A 1 49 SER 49 49 49 SER SER L . n A 1 50 THR 50 50 50 THR THR L . n A 1 51 SER 51 51 51 SER SER L . n A 1 52 ASN 52 52 52 ASN ASN L . n A 1 53 LEU 53 53 53 LEU LEU L . n A 1 54 ALA 54 54 54 ALA ALA L . n A 1 55 SER 55 55 55 SER SER L . n A 1 56 GLY 56 56 56 GLY GLY L . n A 1 57 VAL 57 57 57 VAL VAL L . n A 1 58 PRO 58 58 58 PRO PRO L . n A 1 59 SER 59 59 59 SER SER L . n A 1 60 ARG 60 60 60 ARG ARG L . n A 1 61 PHE 61 61 61 PHE PHE L . n A 1 62 SER 62 62 62 SER SER L . n A 1 63 GLY 63 63 63 GLY GLY L . n A 1 64 SER 64 64 64 SER SER L . n A 1 65 GLY 65 65 65 GLY GLY L . n A 1 66 SER 66 66 66 SER SER L . n A 1 67 GLY 67 67 67 GLY GLY L . n A 1 68 THR 68 68 68 THR THR L . n A 1 69 PHE 69 69 69 PHE PHE L . n A 1 70 TYR 70 70 70 TYR TYR L . n A 1 71 SER 71 71 71 SER SER L . n A 1 72 LEU 72 72 72 LEU LEU L . n A 1 73 THR 73 73 73 THR THR L . n A 1 74 ILE 74 74 74 ILE ILE L . n A 1 75 SER 75 75 75 SER SER L . n A 1 76 SER 76 76 76 SER SER L . n A 1 77 VAL 77 77 77 VAL VAL L . n A 1 78 GLU 78 78 78 GLU GLU L . n A 1 79 ALA 79 79 79 ALA ALA L . n A 1 80 GLU 80 80 80 GLU GLU L . n A 1 81 ASP 81 81 81 ASP ASP L . n A 1 82 ALA 82 82 82 ALA ALA L . n A 1 83 ALA 83 83 83 ALA ALA L . n A 1 84 TYR 84 84 84 TYR TYR L . n A 1 85 TYR 85 85 85 TYR TYR L . n A 1 86 TYR 86 86 86 TYR TYR L . n A 1 87 CYS 87 87 87 CYS CYS L . n A 1 88 HIS 88 88 88 HIS HIS L . n A 1 89 GLN 89 89 89 GLN GLN L . n A 1 90 TRP 90 90 90 TRP TRP L . n A 1 91 SER 91 91 91 SER SER L . n A 1 92 SER 92 92 92 SER SER L . n A 1 93 TRP 93 93 93 TRP TRP L . n A 1 94 THR 94 94 94 THR THR L . n A 1 95 PHE 95 95 95 PHE PHE L . n A 1 96 GLY 96 96 96 GLY GLY L . n A 1 97 GLY 97 97 97 GLY GLY L . n A 1 98 GLY 98 98 98 GLY GLY L . n A 1 99 THR 99 99 99 THR THR L . n A 1 100 LYS 100 100 100 LYS LYS L . n A 1 101 LEU 101 101 101 LEU LEU L . n A 1 102 GLU 102 102 102 GLU GLU L . n A 1 103 ILE 103 103 103 ILE ILE L . n A 1 104 LYS 104 104 104 LYS LYS L . n B 2 1 GLU 1 1 1 GLU GLU H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 MET 3 3 3 MET MET H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLU 6 6 6 GLU GLU H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 GLY 9 9 9 GLY GLY H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 VAL 11 11 11 VAL VAL H . n B 2 12 VAL 12 12 12 VAL VAL H . n B 2 13 LYS 13 13 13 LYS LYS H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 GLY 16 16 16 GLY GLY H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 LEU 18 18 18 LEU LEU H . n B 2 19 LYS 19 19 19 LYS LYS H . n B 2 20 LEU 20 20 20 LEU LEU H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 ALA 23 23 23 ALA ALA H . n B 2 24 ALA 24 24 24 ALA ALA H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLY 26 26 26 GLY GLY H . n B 2 27 PHE 27 27 27 PHE PHE H . n B 2 28 SER 28 28 28 SER SER H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 SER 30 30 30 SER SER H . n B 2 31 THR 31 31 31 THR THR H . n B 2 32 TYR 32 32 32 TYR TYR H . n B 2 33 ALA 33 33 33 ALA ALA H . n B 2 34 MET 34 34 34 MET MET H . n B 2 35 SER 35 35 35 SER SER H . n B 2 36 TRP 36 36 36 TRP TRP H . n B 2 37 ILE 37 37 37 ILE ILE H . n B 2 38 ARG 38 38 38 ARG ARG H . n B 2 39 GLN 39 39 39 GLN GLN H . n B 2 40 THR 40 40 40 THR THR H . n B 2 41 PRO 41 41 41 PRO PRO H . n B 2 42 GLU 42 42 42 GLU GLU H . n B 2 43 LYS 43 43 43 LYS LYS H . n B 2 44 SER 44 44 44 SER SER H . n B 2 45 LEU 45 45 45 LEU LEU H . n B 2 46 GLU 46 46 46 GLU GLU H . n B 2 47 TRP 47 47 47 TRP TRP H . n B 2 48 VAL 48 48 48 VAL VAL H . n B 2 49 ALA 49 49 49 ALA ALA H . n B 2 50 ALA 50 50 50 ALA ALA H . n B 2 51 ILE 51 51 51 ILE ILE H . n B 2 52 SER 52 52 52 SER SER H . n B 2 53 SER 53 53 53 SER SER H . n B 2 54 GLY 54 54 54 GLY GLY H . n B 2 55 GLY 55 55 55 GLY GLY H . n B 2 56 THR 56 56 56 THR THR H . n B 2 57 ASN 57 57 57 ASN ASN H . n B 2 58 THR 58 58 58 THR THR H . n B 2 59 TYR 59 59 59 TYR TYR H . n B 2 60 TYR 60 60 60 TYR TYR H . n B 2 61 PRO 61 61 61 PRO PRO H . n B 2 62 GLY 62 62 62 GLY GLY H . n B 2 63 SER 63 63 63 SER SER H . n B 2 64 VAL 64 64 64 VAL VAL H . n B 2 65 LYS 65 65 65 LYS LYS H . n B 2 66 GLY 66 66 66 GLY GLY H . n B 2 67 ARG 67 67 67 ARG ARG H . n B 2 68 PHE 68 68 68 PHE PHE H . n B 2 69 THR 69 69 69 THR THR H . n B 2 70 ILE 70 70 70 ILE ILE H . n B 2 71 SER 71 71 71 SER SER H . n B 2 72 ARG 72 72 72 ARG ARG H . n B 2 73 ASP 73 73 73 ASP ASP H . n B 2 74 LYS 74 74 74 LYS LYS H . n B 2 75 ALA 75 75 75 ALA ALA H . n B 2 76 MET 76 76 76 MET MET H . n B 2 77 ASN 77 77 77 ASN ASN H . n B 2 78 THR 78 78 78 THR THR H . n B 2 79 LEU 79 79 79 LEU LEU H . n B 2 80 TYR 80 80 80 TYR TYR H . n B 2 81 LEU 81 81 81 LEU LEU H . n B 2 82 GLN 82 82 82 GLN GLN H . n B 2 83 LEU 83 83 83 LEU LEU H . n B 2 84 SER 84 84 84 SER SER H . n B 2 85 SER 85 85 85 SER SER H . n B 2 86 LEU 86 86 86 LEU LEU H . n B 2 87 ARG 87 87 87 ARG ARG H . n B 2 88 SER 88 88 88 SER SER H . n B 2 89 GLU 89 89 89 GLU GLU H . n B 2 90 ASP 90 90 90 ASP ASP H . n B 2 91 THR 91 91 91 THR THR H . n B 2 92 ALA 92 92 92 ALA ALA H . n B 2 93 MET 93 93 93 MET MET H . n B 2 94 TYR 94 94 94 TYR TYR H . n B 2 95 TYR 95 95 95 TYR TYR H . n B 2 96 CYS 96 96 96 CYS CYS H . n B 2 97 VAL 97 97 97 VAL VAL H . n B 2 98 ARG 98 98 98 ARG ARG H . n B 2 99 HIS 99 99 99 HIS HIS H . n B 2 100 SER 100 100 100 SER SER H . n B 2 101 GLY 101 101 101 GLY GLY H . n B 2 102 ASN 102 102 102 ASN ASN H . n B 2 103 TYR 103 103 103 TYR TYR H . n B 2 104 VAL 104 104 104 VAL VAL H . n B 2 105 ASP 105 105 105 ASP ASP H . n B 2 106 SER 106 106 106 SER SER H . n B 2 107 VAL 107 107 107 VAL VAL H . n B 2 108 MET 108 108 108 MET MET H . n B 2 109 ASP 109 109 109 ASP ASP H . n B 2 110 TYR 110 110 110 TYR TYR H . n B 2 111 TRP 111 111 111 TRP TRP H . n B 2 112 GLY 112 112 112 GLY GLY H . n B 2 113 GLN 113 113 113 GLN GLN H . n B 2 114 GLY 114 114 114 GLY GLY H . n B 2 115 THR 115 115 115 THR THR H . n B 2 116 SER 116 116 116 SER SER H . n B 2 117 VAL 117 117 117 VAL VAL H . n B 2 118 THR 118 118 118 THR THR H . n B 2 119 VAL 119 119 119 VAL VAL H . n B 2 120 SER 120 120 120 SER SER H . n B 2 121 SER 121 121 121 SER SER H . n C 3 1 GLU 1 324 ? ? ? G . n C 3 2 SER 2 325 ? ? ? G . n C 3 3 ILE 3 326 ? ? ? G . n C 3 4 VAL 4 327 ? ? ? G . n C 3 5 ARG 5 328 ? ? ? G . n C 3 6 PHE 6 329 ? ? ? G . n C 3 7 PRO 7 330 ? ? ? G . n C 3 8 ASN 8 331 ? ? ? G . n C 3 9 ILE 9 332 ? ? ? G . n C 3 10 THR 10 333 333 THR THR G . n C 3 11 ASN 11 334 334 ASN ASN G . n C 3 12 LEU 12 335 335 LEU LEU G . n C 3 13 CYS 13 336 336 CYS CYS G . n C 3 14 PRO 14 337 337 PRO PRO G . n C 3 15 PHE 15 338 338 PHE PHE G . n C 3 16 GLY 16 339 339 GLY GLY G . n C 3 17 GLU 17 340 340 GLU GLU G . n C 3 18 VAL 18 341 341 VAL VAL G . n C 3 19 PHE 19 342 342 PHE PHE G . n C 3 20 ASN 20 343 343 ASN ASN G . n C 3 21 ALA 21 344 344 ALA ALA G . n C 3 22 THR 22 345 345 THR THR G . n C 3 23 ARG 23 346 346 ARG ARG G . n C 3 24 PHE 24 347 347 PHE PHE G . n C 3 25 ALA 25 348 348 ALA ALA G . n C 3 26 SER 26 349 349 SER SER G . n C 3 27 VAL 27 350 350 VAL VAL G . n C 3 28 TYR 28 351 351 TYR TYR G . n C 3 29 ALA 29 352 352 ALA ALA G . n C 3 30 TRP 30 353 353 TRP TRP G . n C 3 31 ASN 31 354 354 ASN ASN G . n C 3 32 ARG 32 355 355 ARG ARG G . n C 3 33 LYS 33 356 356 LYS LYS G . n C 3 34 ARG 34 357 357 ARG ARG G . n C 3 35 ILE 35 358 358 ILE ILE G . n C 3 36 SER 36 359 359 SER SER G . n C 3 37 ASN 37 360 360 ASN ASN G . n C 3 38 CYS 38 361 361 CYS CYS G . n C 3 39 VAL 39 362 362 VAL VAL G . n C 3 40 ALA 40 363 363 ALA ALA G . n C 3 41 ASP 41 364 364 ASP ASP G . n C 3 42 TYR 42 365 365 TYR TYR G . n C 3 43 SER 43 366 366 SER SER G . n C 3 44 VAL 44 367 367 VAL VAL G . n C 3 45 LEU 45 368 368 LEU LEU G . n C 3 46 TYR 46 369 369 TYR TYR G . n C 3 47 ASN 47 370 370 ASN ASN G . n C 3 48 SER 48 371 371 SER SER G . n C 3 49 ALA 49 372 372 ALA ALA G . n C 3 50 SER 50 373 373 SER SER G . n C 3 51 PHE 51 374 374 PHE PHE G . n C 3 52 SER 52 375 375 SER SER G . n C 3 53 THR 53 376 376 THR THR G . n C 3 54 PHE 54 377 377 PHE PHE G . n C 3 55 LYS 55 378 378 LYS LYS G . n C 3 56 CYS 56 379 379 CYS CYS G . n C 3 57 TYR 57 380 380 TYR TYR G . n C 3 58 GLY 58 381 381 GLY GLY G . n C 3 59 VAL 59 382 382 VAL VAL G . n C 3 60 SER 60 383 383 SER SER G . n C 3 61 PRO 61 384 384 PRO PRO G . n C 3 62 THR 62 385 385 THR THR G . n C 3 63 LYS 63 386 386 LYS LYS G . n C 3 64 LEU 64 387 387 LEU LEU G . n C 3 65 ASN 65 388 388 ASN ASN G . n C 3 66 ASP 66 389 389 ASP ASP G . n C 3 67 LEU 67 390 390 LEU LEU G . n C 3 68 CYS 68 391 391 CYS CYS G . n C 3 69 PHE 69 392 392 PHE PHE G . n C 3 70 THR 70 393 393 THR THR G . n C 3 71 ASN 71 394 394 ASN ASN G . n C 3 72 VAL 72 395 395 VAL VAL G . n C 3 73 TYR 73 396 396 TYR TYR G . n C 3 74 ALA 74 397 397 ALA ALA G . n C 3 75 ASP 75 398 398 ASP ASP G . n C 3 76 SER 76 399 399 SER SER G . n C 3 77 PHE 77 400 400 PHE PHE G . n C 3 78 VAL 78 401 401 VAL VAL G . n C 3 79 ILE 79 402 402 ILE ILE G . n C 3 80 ARG 80 403 403 ARG ARG G . n C 3 81 GLY 81 404 404 GLY GLY G . n C 3 82 ASP 82 405 405 ASP ASP G . n C 3 83 GLU 83 406 406 GLU GLU G . n C 3 84 VAL 84 407 407 VAL VAL G . n C 3 85 ARG 85 408 408 ARG ARG G . n C 3 86 GLN 86 409 409 GLN GLN G . n C 3 87 ILE 87 410 410 ILE ILE G . n C 3 88 ALA 88 411 411 ALA ALA G . n C 3 89 PRO 89 412 412 PRO PRO G . n C 3 90 GLY 90 413 413 GLY GLY G . n C 3 91 GLN 91 414 414 GLN GLN G . n C 3 92 THR 92 415 415 THR THR G . n C 3 93 GLY 93 416 416 GLY GLY G . n C 3 94 LYS 94 417 417 LYS LYS G . n C 3 95 ILE 95 418 418 ILE ILE G . n C 3 96 ALA 96 419 419 ALA ALA G . n C 3 97 ASP 97 420 420 ASP ASP G . n C 3 98 TYR 98 421 421 TYR TYR G . n C 3 99 ASN 99 422 422 ASN ASN G . n C 3 100 TYR 100 423 423 TYR TYR G . n C 3 101 LYS 101 424 424 LYS LYS G . n C 3 102 LEU 102 425 425 LEU LEU G . n C 3 103 PRO 103 426 426 PRO PRO G . n C 3 104 ASP 104 427 427 ASP ASP G . n C 3 105 ASP 105 428 428 ASP ASP G . n C 3 106 PHE 106 429 429 PHE PHE G . n C 3 107 THR 107 430 430 THR THR G . n C 3 108 GLY 108 431 431 GLY GLY G . n C 3 109 CYS 109 432 432 CYS CYS G . n C 3 110 VAL 110 433 433 VAL VAL G . n C 3 111 ILE 111 434 434 ILE ILE G . n C 3 112 ALA 112 435 435 ALA ALA G . n C 3 113 TRP 113 436 436 TRP TRP G . n C 3 114 ASN 114 437 437 ASN ASN G . n C 3 115 SER 115 438 438 SER SER G . n C 3 116 ASN 116 439 439 ASN ASN G . n C 3 117 ASN 117 440 440 ASN ASN G . n C 3 118 LEU 118 441 441 LEU LEU G . n C 3 119 ASP 119 442 442 ASP ASP G . n C 3 120 SER 120 443 443 SER SER G . n C 3 121 LYS 121 444 444 LYS LYS G . n C 3 122 VAL 122 445 445 VAL VAL G . n C 3 123 GLY 123 446 446 GLY GLY G . n C 3 124 GLY 124 447 447 GLY GLY G . n C 3 125 ASN 125 448 448 ASN ASN G . n C 3 126 TYR 126 449 449 TYR TYR G . n C 3 127 ASN 127 450 450 ASN ASN G . n C 3 128 TYR 128 451 451 TYR TYR G . n C 3 129 LEU 129 452 452 LEU LEU G . n C 3 130 TYR 130 453 453 TYR TYR G . n C 3 131 ARG 131 454 454 ARG ARG G . n C 3 132 LEU 132 455 455 LEU LEU G . n C 3 133 PHE 133 456 456 PHE PHE G . n C 3 134 ARG 134 457 457 ARG ARG G . n C 3 135 LYS 135 458 458 LYS LYS G . n C 3 136 SER 136 459 459 SER SER G . n C 3 137 ASN 137 460 460 ASN ASN G . n C 3 138 LEU 138 461 461 LEU LEU G . n C 3 139 LYS 139 462 462 LYS LYS G . n C 3 140 PRO 140 463 463 PRO PRO G . n C 3 141 PHE 141 464 464 PHE PHE G . n C 3 142 GLU 142 465 465 GLU GLU G . n C 3 143 ARG 143 466 466 ARG ARG G . n C 3 144 ASP 144 467 467 ASP ASP G . n C 3 145 ILE 145 468 468 ILE ILE G . n C 3 146 SER 146 469 469 SER SER G . n C 3 147 THR 147 470 470 THR THR G . n C 3 148 GLU 148 471 471 GLU GLU G . n C 3 149 ILE 149 472 472 ILE ILE G . n C 3 150 TYR 150 473 473 TYR TYR G . n C 3 151 GLN 151 474 ? ? ? G . n C 3 152 ALA 152 475 ? ? ? G . n C 3 153 GLY 153 476 ? ? ? G . n C 3 154 SER 154 477 ? ? ? G . n C 3 155 THR 155 478 ? ? ? G . n C 3 156 PRO 156 479 ? ? ? G . n C 3 157 CYS 157 480 ? ? ? G . n C 3 158 ASN 158 481 ? ? ? G . n C 3 159 GLY 159 482 ? ? ? G . n C 3 160 VAL 160 483 ? ? ? G . n C 3 161 GLU 161 484 ? ? ? G . n C 3 162 GLY 162 485 ? ? ? G . n C 3 163 PHE 163 486 ? ? ? G . n C 3 164 ASN 164 487 ? ? ? G . n C 3 165 CYS 165 488 ? ? ? G . n C 3 166 TYR 166 489 489 TYR TYR G . n C 3 167 PHE 167 490 490 PHE PHE G . n C 3 168 PRO 168 491 491 PRO PRO G . n C 3 169 LEU 169 492 492 LEU LEU G . n C 3 170 GLN 170 493 493 GLN GLN G . n C 3 171 SER 171 494 494 SER SER G . n C 3 172 TYR 172 495 495 TYR TYR G . n C 3 173 GLY 173 496 496 GLY GLY G . n C 3 174 PHE 174 497 497 PHE PHE G . n C 3 175 GLN 175 498 498 GLN GLN G . n C 3 176 PRO 176 499 499 PRO PRO G . n C 3 177 THR 177 500 500 THR THR G . n C 3 178 ASN 178 501 501 ASN ASN G . n C 3 179 GLY 179 502 502 GLY GLY G . n C 3 180 VAL 180 503 503 VAL VAL G . n C 3 181 GLY 181 504 504 GLY GLY G . n C 3 182 TYR 182 505 505 TYR TYR G . n C 3 183 GLN 183 506 506 GLN GLN G . n C 3 184 PRO 184 507 507 PRO PRO G . n C 3 185 TYR 185 508 508 TYR TYR G . n C 3 186 ARG 186 509 509 ARG ARG G . n C 3 187 VAL 187 510 510 VAL VAL G . n C 3 188 VAL 188 511 511 VAL VAL G . n C 3 189 VAL 189 512 512 VAL VAL G . n C 3 190 LEU 190 513 513 LEU LEU G . n C 3 191 SER 191 514 514 SER SER G . n C 3 192 PHE 192 515 515 PHE PHE G . n C 3 193 GLU 193 516 516 GLU GLU G . n C 3 194 LEU 194 517 517 LEU LEU G . n C 3 195 LEU 195 518 518 LEU LEU G . n C 3 196 HIS 196 519 519 HIS HIS G . n C 3 197 ALA 197 520 520 ALA ALA G . n C 3 198 PRO 198 521 521 PRO PRO G . n C 3 199 ALA 199 522 522 ALA ALA G . n C 3 200 THR 200 523 523 THR THR G . n C 3 201 VAL 201 524 524 VAL VAL G . n C 3 202 CYS 202 525 525 CYS CYS G . n C 3 203 GLY 203 526 526 GLY GLY G . n C 3 204 PRO 204 527 ? ? ? G . n D 4 1 ASP 1 1 1 ASP ASP D . n D 4 2 ILE 2 2 2 ILE ILE D . n D 4 3 VAL 3 3 3 VAL VAL D . n D 4 4 LEU 4 4 4 LEU LEU D . n D 4 5 THR 5 5 5 THR THR D . n D 4 6 GLN 6 6 6 GLN GLN D . n D 4 7 SER 7 7 7 SER SER D . n D 4 8 PRO 8 8 8 PRO PRO D . n D 4 9 ALA 9 9 9 ALA ALA D . n D 4 10 THR 10 10 10 THR THR D . n D 4 11 LEU 11 11 11 LEU LEU D . n D 4 12 SER 12 12 12 SER SER D . n D 4 13 VAL 13 13 13 VAL VAL D . n D 4 14 THR 14 14 14 THR THR D . n D 4 15 PRO 15 15 15 PRO PRO D . n D 4 16 GLY 16 16 16 GLY GLY D . n D 4 17 ASP 17 17 17 ASP ASP D . n D 4 18 ASN 18 18 18 ASN ASN D . n D 4 19 VAL 19 19 19 VAL VAL D . n D 4 20 SER 20 20 20 SER SER D . n D 4 21 LEU 21 21 21 LEU LEU D . n D 4 22 SER 22 22 22 SER SER D . n D 4 23 CYS 23 23 23 CYS CYS D . n D 4 24 ARG 24 24 24 ARG ARG D . n D 4 25 ALA 25 25 25 ALA ALA D . n D 4 26 SER 26 26 26 SER SER D . n D 4 27 GLN 27 27 27 GLN GLN D . n D 4 28 ILE 28 28 28 ILE ILE D . n D 4 29 ILE 29 29 29 ILE ILE D . n D 4 30 SER 30 30 30 SER SER D . n D 4 31 ASN 31 31 31 ASN ASN D . n D 4 32 ASN 32 32 32 ASN ASN D . n D 4 33 LEU 33 33 33 LEU LEU D . n D 4 34 HIS 34 34 34 HIS HIS D . n D 4 35 TRP 35 35 35 TRP TRP D . n D 4 36 TYR 36 36 36 TYR TYR D . n D 4 37 GLN 37 37 37 GLN GLN D . n D 4 38 GLN 38 38 38 GLN GLN D . n D 4 39 LYS 39 39 39 LYS LYS D . n D 4 40 SER 40 40 40 SER SER D . n D 4 41 HIS 41 41 41 HIS HIS D . n D 4 42 GLU 42 42 42 GLU GLU D . n D 4 43 SER 43 43 43 SER SER D . n D 4 44 PRO 44 44 44 PRO PRO D . n D 4 45 ARG 45 45 45 ARG ARG D . n D 4 46 LEU 46 46 46 LEU LEU D . n D 4 47 LEU 47 47 47 LEU LEU D . n D 4 48 ILE 48 48 48 ILE ILE D . n D 4 49 LYS 49 49 49 LYS LYS D . n D 4 50 TYR 50 50 50 TYR TYR D . n D 4 51 ALA 51 51 51 ALA ALA D . n D 4 52 SER 52 52 52 SER SER D . n D 4 53 GLN 53 53 53 GLN GLN D . n D 4 54 SER 54 54 54 SER SER D . n D 4 55 ILE 55 55 55 ILE ILE D . n D 4 56 SER 56 56 56 SER SER D . n D 4 57 GLY 57 57 57 GLY GLY D . n D 4 58 ILE 58 58 58 ILE ILE D . n D 4 59 PRO 59 59 59 PRO PRO D . n D 4 60 SER 60 60 60 SER SER D . n D 4 61 ARG 61 61 61 ARG ARG D . n D 4 62 PHE 62 62 62 PHE PHE D . n D 4 63 SER 63 63 63 SER SER D . n D 4 64 GLY 64 64 64 GLY GLY D . n D 4 65 SER 65 65 65 SER SER D . n D 4 66 GLY 66 66 66 GLY GLY D . n D 4 67 SER 67 67 67 SER SER D . n D 4 68 GLY 68 68 68 GLY GLY D . n D 4 69 THR 69 69 69 THR THR D . n D 4 70 ASP 70 70 70 ASP ASP D . n D 4 71 PHE 71 71 71 PHE PHE D . n D 4 72 THR 72 72 72 THR THR D . n D 4 73 LEU 73 73 73 LEU LEU D . n D 4 74 SER 74 74 74 SER SER D . n D 4 75 ILE 75 75 75 ILE ILE D . n D 4 76 ASN 76 76 76 ASN ASN D . n D 4 77 SER 77 77 77 SER SER D . n D 4 78 VAL 78 78 78 VAL VAL D . n D 4 79 GLU 79 79 79 GLU GLU D . n D 4 80 THR 80 80 80 THR THR D . n D 4 81 GLU 81 81 81 GLU GLU D . n D 4 82 ASP 82 82 82 ASP ASP D . n D 4 83 PHE 83 83 83 PHE PHE D . n D 4 84 GLY 84 84 84 GLY GLY D . n D 4 85 MET 85 85 85 MET MET D . n D 4 86 TYR 86 86 86 TYR TYR D . n D 4 87 PHE 87 87 87 PHE PHE D . n D 4 88 CYS 88 88 88 CYS CYS D . n D 4 89 GLN 89 89 89 GLN GLN D . n D 4 90 GLN 90 90 90 GLN GLN D . n D 4 91 SER 91 91 91 SER SER D . n D 4 92 ASN 92 92 92 ASN ASN D . n D 4 93 THR 93 93 93 THR THR D . n D 4 94 TRP 94 94 94 TRP TRP D . n D 4 95 PRO 95 95 95 PRO PRO D . n D 4 96 LEU 96 96 96 LEU LEU D . n D 4 97 THR 97 97 97 THR THR D . n D 4 98 CYS 98 98 98 CYS CYS D . n D 4 99 GLY 99 99 99 GLY GLY D . n D 4 100 SER 100 100 100 SER SER D . n D 4 101 GLY 101 101 101 GLY GLY D . n D 4 102 THR 102 102 102 THR THR D . n D 4 103 LYS 103 103 103 LYS LYS D . n D 4 104 LEU 104 104 104 LEU LEU D . n D 4 105 GLU 105 105 105 GLU GLU D . n D 4 106 LEU 106 106 106 LEU LEU D . n D 4 107 ASN 107 107 107 ASN ASN D . n E 5 1 GLN 1 1 1 GLN GLN C . n E 5 2 ILE 2 2 2 ILE ILE C . n E 5 3 GLN 3 3 3 GLN GLN C . n E 5 4 LEU 4 4 4 LEU LEU C . n E 5 5 VAL 5 5 5 VAL VAL C . n E 5 6 GLN 6 6 6 GLN GLN C . n E 5 7 SER 7 7 7 SER SER C . n E 5 8 GLY 8 8 8 GLY GLY C . n E 5 9 PRO 9 9 9 PRO PRO C . n E 5 10 GLU 10 10 10 GLU GLU C . n E 5 11 LEU 11 11 11 LEU LEU C . n E 5 12 LYS 12 12 12 LYS LYS C . n E 5 13 LYS 13 13 13 LYS LYS C . n E 5 14 PRO 14 14 14 PRO PRO C . n E 5 15 GLY 15 15 15 GLY GLY C . n E 5 16 GLU 16 16 16 GLU GLU C . n E 5 17 THR 17 17 17 THR THR C . n E 5 18 VAL 18 18 18 VAL VAL C . n E 5 19 LYS 19 19 19 LYS LYS C . n E 5 20 ILE 20 20 20 ILE ILE C . n E 5 21 SER 21 21 21 SER SER C . n E 5 22 CYS 22 22 22 CYS CYS C . n E 5 23 LYS 23 23 23 LYS LYS C . n E 5 24 ALA 24 24 24 ALA ALA C . n E 5 25 SER 25 25 25 SER SER C . n E 5 26 GLY 26 26 26 GLY GLY C . n E 5 27 TYR 27 27 27 TYR TYR C . n E 5 28 THR 28 28 28 THR THR C . n E 5 29 PHE 29 29 29 PHE PHE C . n E 5 30 THR 30 30 30 THR THR C . n E 5 31 ASP 31 31 31 ASP ASP C . n E 5 32 TYR 32 32 32 TYR TYR C . n E 5 33 GLY 33 33 33 GLY GLY C . n E 5 34 LEU 34 34 34 LEU LEU C . n E 5 35 ASN 35 35 35 ASN ASN C . n E 5 36 TRP 36 36 36 TRP TRP C . n E 5 37 VAL 37 37 37 VAL VAL C . n E 5 38 LYS 38 38 38 LYS LYS C . n E 5 39 GLN 39 39 39 GLN GLN C . n E 5 40 ALA 40 40 40 ALA ALA C . n E 5 41 PRO 41 41 41 PRO PRO C . n E 5 42 GLY 42 42 42 GLY GLY C . n E 5 43 LYS 43 43 43 LYS LYS C . n E 5 44 GLY 44 44 44 GLY GLY C . n E 5 45 LEU 45 45 45 LEU LEU C . n E 5 46 LYS 46 46 46 LYS LYS C . n E 5 47 TRP 47 47 47 TRP TRP C . n E 5 48 MET 48 48 48 MET MET C . n E 5 49 GLY 49 49 49 GLY GLY C . n E 5 50 TRP 50 50 50 TRP TRP C . n E 5 51 ILE 51 51 51 ILE ILE C . n E 5 52 ASN 52 52 52 ASN ASN C . n E 5 53 THR 53 53 53 THR THR C . n E 5 54 TYR 54 54 54 TYR TYR C . n E 5 55 SER 55 55 55 SER SER C . n E 5 56 GLY 56 56 56 GLY GLY C . n E 5 57 GLU 57 57 57 GLU GLU C . n E 5 58 PRO 58 58 58 PRO PRO C . n E 5 59 THR 59 59 59 THR THR C . n E 5 60 TYR 60 60 60 TYR TYR C . n E 5 61 ASN 61 61 61 ASN ASN C . n E 5 62 ASP 62 62 62 ASP ASP C . n E 5 63 GLU 63 63 63 GLU GLU C . n E 5 64 PHE 64 64 64 PHE PHE C . n E 5 65 ARG 65 65 65 ARG ARG C . n E 5 66 GLY 66 66 66 GLY GLY C . n E 5 67 ARG 67 67 67 ARG ARG C . n E 5 68 PHE 68 68 68 PHE PHE C . n E 5 69 ALA 69 69 69 ALA ALA C . n E 5 70 PHE 70 70 70 PHE PHE C . n E 5 71 SER 71 71 71 SER SER C . n E 5 72 LEU 72 72 72 LEU LEU C . n E 5 73 GLU 73 73 73 GLU GLU C . n E 5 74 THR 74 74 74 THR THR C . n E 5 75 SER 75 75 75 SER SER C . n E 5 76 THR 76 76 76 THR THR C . n E 5 77 ILE 77 77 77 ILE ILE C . n E 5 78 THR 78 78 78 THR THR C . n E 5 79 ALA 79 79 79 ALA ALA C . n E 5 80 TYR 80 80 80 TYR TYR C . n E 5 81 LEU 81 81 81 LEU LEU C . n E 5 82 LYS 82 82 82 LYS LYS C . n E 5 83 ILE 83 83 83 ILE ILE C . n E 5 84 ASN 84 84 84 ASN ASN C . n E 5 85 ASN 85 85 85 ASN ASN C . n E 5 86 LEU 86 86 86 LEU LEU C . n E 5 87 LYS 87 87 87 LYS LYS C . n E 5 88 ASN 88 88 88 ASN ASN C . n E 5 89 GLU 89 89 89 GLU GLU C . n E 5 90 ASP 90 90 90 ASP ASP C . n E 5 91 THR 91 91 91 THR THR C . n E 5 92 ALA 92 92 92 ALA ALA C . n E 5 93 THR 93 93 93 THR THR C . n E 5 94 TYR 94 94 94 TYR TYR C . n E 5 95 PHE 95 95 95 PHE PHE C . n E 5 96 CYS 96 96 96 CYS CYS C . n E 5 97 ALA 97 97 97 ALA ALA C . n E 5 98 ARG 98 98 98 ARG ARG C . n E 5 99 GLY 99 99 99 GLY GLY C . n E 5 100 GLY 100 100 100 GLY GLY C . n E 5 101 ASN 101 101 101 ASN ASN C . n E 5 102 TRP 102 102 102 TRP TRP C . n E 5 103 ASP 103 103 103 ASP ASP C . n E 5 104 TRP 104 104 104 TRP TRP C . n E 5 105 TYR 105 105 105 TYR TYR C . n E 5 106 PHE 106 106 106 PHE PHE C . n E 5 107 ASP 107 107 107 ASP ASP C . n E 5 108 VAL 108 108 108 VAL VAL C . n E 5 109 TRP 109 109 109 TRP TRP C . n E 5 110 GLY 110 110 110 GLY GLY C . n E 5 111 ALA 111 111 111 ALA ALA C . n E 5 112 GLY 112 112 112 GLY GLY C . n E 5 113 THR 113 113 113 THR THR C . n E 5 114 THR 114 114 114 THR THR C . n E 5 115 VAL 115 115 115 VAL VAL C . n E 5 116 THR 116 116 116 THR THR C . n E 5 117 VAL 117 117 117 VAL VAL C . n E 5 118 SER 118 118 118 SER SER C . n E 5 119 SER 119 119 119 SER SER C . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero F 6 NAG 1 A NAG 1 G NAG 527 n F 6 NAG 2 A NAG 2 G NAG 528 n F 6 BMA 3 A BMA 3 G BMA 529 n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8IV8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8IV8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8IV8 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8IV8 _struct.title 'Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8IV8 _struct_keywords.text 'SARS-CoV-2, Neutralizing antibody, Cryo-EM, VIRAL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8IV8 8IV8 ? 1 ? 1 2 PDB 8IV8 8IV8 ? 2 ? 1 3 UNP SPIKE_SARS2 P0DTC2 ? 3 ;ESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIR GDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGV EGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGP ; 324 4 PDB 8IV8 8IV8 ? 4 ? 1 5 PDB 8IV8 8IV8 ? 5 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8IV8 L 1 ? 104 ? 8IV8 1 ? 104 ? 1 104 2 2 8IV8 H 1 ? 121 ? 8IV8 1 ? 121 ? 1 121 3 3 8IV8 G 1 ? 204 ? P0DTC2 324 ? 527 ? 324 527 4 4 8IV8 D 1 ? 107 ? 8IV8 1 ? 107 ? 1 107 5 5 8IV8 C 1 ? 119 ? 8IV8 1 ? 119 ? 1 119 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER B 28 ? TYR B 32 ? SER H 28 TYR H 32 5 ? 5 HELX_P HELX_P2 AA2 PHE C 15 ? ASN C 20 ? PHE G 338 ASN G 343 1 ? 6 HELX_P HELX_P3 AA3 SER C 26 ? TRP C 30 ? SER G 349 TRP G 353 5 ? 5 HELX_P HELX_P4 AA4 TYR C 42 ? ASN C 47 ? TYR G 365 ASN G 370 1 ? 6 HELX_P HELX_P5 AA5 ASP C 82 ? ALA C 88 ? ASP G 405 ALA G 411 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 87 SG ? ? L CYS 23 L CYS 87 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 96 SG ? ? H CYS 22 H CYS 96 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf3 disulf ? ? C CYS 13 SG ? ? ? 1_555 C CYS 38 SG ? ? G CYS 336 G CYS 361 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? C CYS 56 SG ? ? ? 1_555 C CYS 109 SG ? ? G CYS 379 G CYS 432 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf5 disulf ? ? C CYS 68 SG ? ? ? 1_555 C CYS 202 SG ? ? G CYS 391 G CYS 525 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? D CYS 23 SG ? ? ? 1_555 D CYS 88 SG ? ? D CYS 23 D CYS 88 1_555 ? ? ? ? ? ? ? 2.038 ? ? disulf7 disulf ? ? E CYS 22 SG ? ? ? 1_555 E CYS 96 SG ? ? C CYS 22 C CYS 96 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? C ASN 20 ND2 ? ? ? 1_555 F NAG . C1 ? ? G ASN 343 A NAG 1 1_555 ? ? ? ? ? ? ? 1.434 ? N-Glycosylation covale2 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? A NAG 1 A NAG 2 1_555 ? ? ? ? ? ? ? 1.453 ? ? covale3 covale both ? F NAG . O4 ? ? ? 1_555 F BMA . C1 ? ? A NAG 2 A BMA 3 1_555 ? ? ? ? ? ? ? 1.441 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 7 A . ? SER 7 L PRO 8 A ? PRO 8 L 1 0.44 2 SER 7 D . ? SER 7 D PRO 8 D ? PRO 8 D 1 -2.03 3 TRP 94 D . ? TRP 94 D PRO 95 D ? PRO 95 D 1 -1.34 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 6 ? AA3 ? 3 ? AA4 ? 4 ? AA5 ? 5 ? AA6 ? 5 ? AA7 ? 2 ? AA8 ? 4 ? AA9 ? 2 ? AB1 ? 4 ? AB2 ? 4 ? AB3 ? 4 ? AB4 ? 4 ? AB5 ? 4 ? AB6 ? 4 ? AB7 ? 2 ? AB8 ? 2 ? AB9 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel AA8 2 3 ? anti-parallel AA8 3 4 ? anti-parallel AA9 1 2 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB1 3 4 ? anti-parallel AB2 1 2 ? anti-parallel AB2 2 3 ? anti-parallel AB2 3 4 ? anti-parallel AB3 1 2 ? anti-parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel AB4 3 4 ? anti-parallel AB5 1 2 ? anti-parallel AB5 2 3 ? anti-parallel AB5 3 4 ? anti-parallel AB6 1 2 ? anti-parallel AB6 2 3 ? anti-parallel AB6 3 4 ? anti-parallel AB7 1 2 ? parallel AB8 1 2 ? anti-parallel AB9 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 4 ? THR A 5 ? LEU L 4 THR L 5 AA1 2 SER A 24 ? VAL A 25 ? SER L 24 VAL L 25 AA2 1 ILE A 10 ? SER A 12 ? ILE L 10 SER L 12 AA2 2 THR A 99 ? GLU A 102 ? THR L 99 GLU L 102 AA2 3 TYR A 84 ? TYR A 86 ? TYR L 84 TYR L 86 AA2 4 TRP A 34 ? GLN A 37 ? TRP L 34 GLN L 37 AA2 5 LYS A 44 ? TYR A 48 ? LYS L 44 TYR L 48 AA2 6 ASN A 52 ? LEU A 53 ? ASN L 52 LEU L 53 AA3 1 ILE A 19 ? LEU A 21 ? ILE L 19 LEU L 21 AA3 2 PHE A 69 ? ILE A 74 ? PHE L 69 ILE L 74 AA3 3 SER A 64 ? SER A 66 ? SER L 64 SER L 66 AA4 1 MET B 3 ? VAL B 5 ? MET H 3 VAL H 5 AA4 2 SER B 17 ? SER B 25 ? SER H 17 SER H 25 AA4 3 THR B 78 ? SER B 84 ? THR H 78 SER H 84 AA4 4 THR B 69 ? ARG B 72 ? THR H 69 ARG H 72 AA5 1 THR B 58 ? TYR B 59 ? THR H 58 TYR H 59 AA5 2 LEU B 45 ? ILE B 51 ? LEU H 45 ILE H 51 AA5 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA5 4 ALA B 92 ? HIS B 99 ? ALA H 92 HIS H 99 AA5 5 MET B 108 ? TRP B 111 ? MET H 108 TRP H 111 AA6 1 THR B 58 ? TYR B 59 ? THR H 58 TYR H 59 AA6 2 LEU B 45 ? ILE B 51 ? LEU H 45 ILE H 51 AA6 3 MET B 34 ? GLN B 39 ? MET H 34 GLN H 39 AA6 4 ALA B 92 ? HIS B 99 ? ALA H 92 HIS H 99 AA6 5 THR B 115 ? VAL B 117 ? THR H 115 VAL H 117 AA7 1 ARG C 34 ? ILE C 35 ? ARG G 357 ILE G 358 AA7 2 VAL C 72 ? TYR C 73 ? VAL G 395 TYR G 396 AA8 1 THR C 53 ? CYS C 56 ? THR G 376 CYS G 379 AA8 2 CYS C 109 ? ALA C 112 ? CYS G 432 ALA G 435 AA8 3 PRO C 184 ? VAL C 189 ? PRO G 507 VAL G 512 AA8 4 ASP C 75 ? ARG C 80 ? ASP G 398 ARG G 403 AA9 1 LEU C 129 ? ARG C 131 ? LEU G 452 ARG G 454 AA9 2 LEU C 169 ? SER C 171 ? LEU G 492 SER G 494 AB1 1 THR D 5 ? GLN D 6 ? THR D 5 GLN D 6 AB1 2 CYS D 23 ? ILE D 29 ? CYS D 23 ILE D 29 AB1 3 GLY D 68 ? ILE D 75 ? GLY D 68 ILE D 75 AB1 4 VAL D 19 ? SER D 20 ? VAL D 19 SER D 20 AB2 1 THR D 5 ? GLN D 6 ? THR D 5 GLN D 6 AB2 2 CYS D 23 ? ILE D 29 ? CYS D 23 ILE D 29 AB2 3 GLY D 68 ? ILE D 75 ? GLY D 68 ILE D 75 AB2 4 SER D 63 ? SER D 65 ? SER D 63 SER D 65 AB3 1 ARG D 45 ? ILE D 48 ? ARG D 45 ILE D 48 AB3 2 LEU D 33 ? GLN D 38 ? LEU D 33 GLN D 38 AB3 3 GLY D 84 ? GLN D 90 ? GLY D 84 GLN D 90 AB3 4 THR D 97 ? CYS D 98 ? THR D 97 CYS D 98 AB4 1 ARG D 45 ? ILE D 48 ? ARG D 45 ILE D 48 AB4 2 LEU D 33 ? GLN D 38 ? LEU D 33 GLN D 38 AB4 3 GLY D 84 ? GLN D 90 ? GLY D 84 GLN D 90 AB4 4 THR D 102 ? LEU D 104 ? THR D 102 LEU D 104 AB5 1 LEU E 4 ? GLN E 6 ? LEU C 4 GLN C 6 AB5 2 VAL E 18 ? ALA E 24 ? VAL C 18 ALA C 24 AB5 3 THR E 78 ? ILE E 83 ? THR C 78 ILE C 83 AB5 4 PHE E 68 ? ALA E 69 ? PHE C 68 ALA C 69 AB6 1 LEU E 4 ? GLN E 6 ? LEU C 4 GLN C 6 AB6 2 VAL E 18 ? ALA E 24 ? VAL C 18 ALA C 24 AB6 3 THR E 78 ? ILE E 83 ? THR C 78 ILE C 83 AB6 4 LEU E 72 ? GLU E 73 ? LEU C 72 GLU C 73 AB7 1 LEU E 11 ? LYS E 12 ? LEU C 11 LYS C 12 AB7 2 THR E 116 ? VAL E 117 ? THR C 116 VAL C 117 AB8 1 VAL E 37 ? GLN E 39 ? VAL C 37 GLN C 39 AB8 2 THR E 93 ? PHE E 95 ? THR C 93 PHE C 95 AB9 1 GLY E 49 ? ILE E 51 ? GLY C 49 ILE C 51 AB9 2 PRO E 58 ? TYR E 60 ? PRO C 58 TYR C 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 5 ? N THR L 5 O SER A 24 ? O SER L 24 AA2 1 2 N MET A 11 ? N MET L 11 O GLU A 102 ? O GLU L 102 AA2 2 3 O THR A 99 ? O THR L 99 N TYR A 85 ? N TYR L 85 AA2 3 4 O TYR A 86 ? O TYR L 86 N TYR A 35 ? N TYR L 35 AA2 4 5 N GLN A 36 ? N GLN L 36 O LYS A 44 ? O LYS L 44 AA2 5 6 N TYR A 48 ? N TYR L 48 O ASN A 52 ? O ASN L 52 AA3 1 2 N LEU A 21 ? N LEU L 21 O LEU A 72 ? O LEU L 72 AA3 2 3 O SER A 71 ? O SER L 71 N SER A 64 ? N SER L 64 AA4 1 2 N MET B 3 ? N MET H 3 O SER B 25 ? O SER H 25 AA4 2 3 N CYS B 22 ? N CYS H 22 O LEU B 79 ? O LEU H 79 AA4 3 4 O GLN B 82 ? O GLN H 82 N THR B 69 ? N THR H 69 AA5 1 2 O TYR B 59 ? O TYR H 59 N ALA B 50 ? N ALA H 50 AA5 2 3 O ILE B 51 ? O ILE H 51 N MET B 34 ? N MET H 34 AA5 3 4 N ILE B 37 ? N ILE H 37 O TYR B 95 ? O TYR H 95 AA5 4 5 N ARG B 98 ? N ARG H 98 O ASP B 109 ? O ASP H 109 AA6 1 2 O TYR B 59 ? O TYR H 59 N ALA B 50 ? N ALA H 50 AA6 2 3 O ILE B 51 ? O ILE H 51 N MET B 34 ? N MET H 34 AA6 3 4 N ILE B 37 ? N ILE H 37 O TYR B 95 ? O TYR H 95 AA6 4 5 N TYR B 94 ? N TYR H 94 O THR B 115 ? O THR H 115 AA7 1 2 N ILE C 35 ? N ILE G 358 O VAL C 72 ? O VAL G 395 AA8 1 2 N LYS C 55 ? N LYS G 378 O VAL C 110 ? O VAL G 433 AA8 2 3 N ILE C 111 ? N ILE G 434 O VAL C 188 ? O VAL G 511 AA8 3 4 O VAL C 189 ? O VAL G 512 N ASP C 75 ? N ASP G 398 AA9 1 2 N TYR C 130 ? N TYR G 453 O GLN C 170 ? O GLN G 493 AB1 1 2 N THR D 5 ? N THR D 5 O ARG D 24 ? O ARG D 24 AB1 2 3 N CYS D 23 ? N CYS D 23 O PHE D 71 ? O PHE D 71 AB1 3 4 O ILE D 75 ? O ILE D 75 N VAL D 19 ? N VAL D 19 AB2 1 2 N THR D 5 ? N THR D 5 O ARG D 24 ? O ARG D 24 AB2 2 3 N CYS D 23 ? N CYS D 23 O PHE D 71 ? O PHE D 71 AB2 3 4 O SER D 74 ? O SER D 74 N SER D 63 ? N SER D 63 AB3 1 2 O LEU D 47 ? O LEU D 47 N TRP D 35 ? N TRP D 35 AB3 2 3 N TYR D 36 ? N TYR D 36 O PHE D 87 ? O PHE D 87 AB3 3 4 N GLN D 90 ? N GLN D 90 O THR D 97 ? O THR D 97 AB4 1 2 O LEU D 47 ? O LEU D 47 N TRP D 35 ? N TRP D 35 AB4 2 3 N TYR D 36 ? N TYR D 36 O PHE D 87 ? O PHE D 87 AB4 3 4 N GLY D 84 ? N GLY D 84 O LEU D 104 ? O LEU D 104 AB5 1 2 N VAL E 5 ? N VAL C 5 O LYS E 23 ? O LYS C 23 AB5 2 3 N ILE E 20 ? N ILE C 20 O LEU E 81 ? O LEU C 81 AB5 3 4 O LYS E 82 ? O LYS C 82 N ALA E 69 ? N ALA C 69 AB6 1 2 N VAL E 5 ? N VAL C 5 O LYS E 23 ? O LYS C 23 AB6 2 3 N ILE E 20 ? N ILE C 20 O LEU E 81 ? O LEU C 81 AB6 3 4 O THR E 78 ? O THR C 78 N GLU E 73 ? N GLU C 73 AB7 1 2 N LYS E 12 ? N LYS C 12 O THR E 116 ? O THR C 116 AB8 1 2 N GLN E 39 ? N GLN C 39 O THR E 93 ? O THR C 93 AB9 1 2 N TRP E 50 ? N TRP C 50 O THR E 59 ? O THR C 59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS L 23 ? ? -160.23 112.77 2 1 THR L 50 ? ? 66.51 -9.39 3 1 SER L 51 ? ? -141.03 -16.66 4 1 TRP L 93 ? ? 62.93 -0.84 5 1 SER H 30 ? ? -91.55 31.08 6 1 SER H 52 ? ? -78.69 -167.91 7 1 ASP G 389 ? ? -100.29 64.61 8 1 TYR G 449 ? ? -95.03 33.67 9 1 THR G 470 ? ? -91.59 51.92 10 1 ASN D 32 ? ? -98.81 34.50 11 1 ALA D 51 ? ? 65.20 -3.15 12 1 ASN D 92 ? ? -94.70 -61.53 13 1 PHE C 64 ? ? -95.55 57.74 # _pdbx_entry_details.entry_id 8IV8 _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8IV8 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8IV8 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.92 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 134557 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4' ? ? ? '1, 2, 3, 4, 5' 2 1 RECOMBINANT COMPLEX 'SARS-CoV-2 spike protein' ? ? ? 3 3 1 NATURAL COMPLEX 'nAbs 3E2 and 1C4' ? ? ? '1, 2, 4, 5' # _em_imaging.entry_id 8IV8 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TECNAI F30' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2200 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8IV8 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8IV8 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 G GLU 324 ? C GLU 1 2 1 Y 1 G SER 325 ? C SER 2 3 1 Y 1 G ILE 326 ? C ILE 3 4 1 Y 1 G VAL 327 ? C VAL 4 5 1 Y 1 G ARG 328 ? C ARG 5 6 1 Y 1 G PHE 329 ? C PHE 6 7 1 Y 1 G PRO 330 ? C PRO 7 8 1 Y 1 G ASN 331 ? C ASN 8 9 1 Y 1 G ILE 332 ? C ILE 9 10 1 Y 1 G GLN 474 ? C GLN 151 11 1 Y 1 G ALA 475 ? C ALA 152 12 1 Y 1 G GLY 476 ? C GLY 153 13 1 Y 1 G SER 477 ? C SER 154 14 1 Y 1 G THR 478 ? C THR 155 15 1 Y 1 G PRO 479 ? C PRO 156 16 1 Y 1 G CYS 480 ? C CYS 157 17 1 Y 1 G ASN 481 ? C ASN 158 18 1 Y 1 G GLY 482 ? C GLY 159 19 1 Y 1 G VAL 483 ? C VAL 160 20 1 Y 1 G GLU 484 ? C GLU 161 21 1 Y 1 G GLY 485 ? C GLY 162 22 1 Y 1 G PHE 486 ? C PHE 163 23 1 Y 1 G ASN 487 ? C ASN 164 24 1 Y 1 G CYS 488 ? C CYS 165 25 1 Y 1 G PRO 527 ? C PRO 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 NAG C1 C N R 271 NAG C2 C N R 272 NAG C3 C N R 273 NAG C4 C N S 274 NAG C5 C N R 275 NAG C6 C N N 276 NAG C7 C N N 277 NAG C8 C N N 278 NAG N2 N N N 279 NAG O1 O N N 280 NAG O3 O N N 281 NAG O4 O N N 282 NAG O5 O N N 283 NAG O6 O N N 284 NAG O7 O N N 285 NAG H1 H N N 286 NAG H2 H N N 287 NAG H3 H N N 288 NAG H4 H N N 289 NAG H5 H N N 290 NAG H61 H N N 291 NAG H62 H N N 292 NAG H81 H N N 293 NAG H82 H N N 294 NAG H83 H N N 295 NAG HN2 H N N 296 NAG HO1 H N N 297 NAG HO3 H N N 298 NAG HO4 H N N 299 NAG HO6 H N N 300 PHE N N N N 301 PHE CA C N S 302 PHE C C N N 303 PHE O O N N 304 PHE CB C N N 305 PHE CG C Y N 306 PHE CD1 C Y N 307 PHE CD2 C Y N 308 PHE CE1 C Y N 309 PHE CE2 C Y N 310 PHE CZ C Y N 311 PHE OXT O N N 312 PHE H H N N 313 PHE H2 H N N 314 PHE HA H N N 315 PHE HB2 H N N 316 PHE HB3 H N N 317 PHE HD1 H N N 318 PHE HD2 H N N 319 PHE HE1 H N N 320 PHE HE2 H N N 321 PHE HZ H N N 322 PHE HXT H N N 323 PRO N N N N 324 PRO CA C N S 325 PRO C C N N 326 PRO O O N N 327 PRO CB C N N 328 PRO CG C N N 329 PRO CD C N N 330 PRO OXT O N N 331 PRO H H N N 332 PRO HA H N N 333 PRO HB2 H N N 334 PRO HB3 H N N 335 PRO HG2 H N N 336 PRO HG3 H N N 337 PRO HD2 H N N 338 PRO HD3 H N N 339 PRO HXT H N N 340 SER N N N N 341 SER CA C N S 342 SER C C N N 343 SER O O N N 344 SER CB C N N 345 SER OG O N N 346 SER OXT O N N 347 SER H H N N 348 SER H2 H N N 349 SER HA H N N 350 SER HB2 H N N 351 SER HB3 H N N 352 SER HG H N N 353 SER HXT H N N 354 THR N N N N 355 THR CA C N S 356 THR C C N N 357 THR O O N N 358 THR CB C N R 359 THR OG1 O N N 360 THR CG2 C N N 361 THR OXT O N N 362 THR H H N N 363 THR H2 H N N 364 THR HA H N N 365 THR HB H N N 366 THR HG1 H N N 367 THR HG21 H N N 368 THR HG22 H N N 369 THR HG23 H N N 370 THR HXT H N N 371 TRP N N N N 372 TRP CA C N S 373 TRP C C N N 374 TRP O O N N 375 TRP CB C N N 376 TRP CG C Y N 377 TRP CD1 C Y N 378 TRP CD2 C Y N 379 TRP NE1 N Y N 380 TRP CE2 C Y N 381 TRP CE3 C Y N 382 TRP CZ2 C Y N 383 TRP CZ3 C Y N 384 TRP CH2 C Y N 385 TRP OXT O N N 386 TRP H H N N 387 TRP H2 H N N 388 TRP HA H N N 389 TRP HB2 H N N 390 TRP HB3 H N N 391 TRP HD1 H N N 392 TRP HE1 H N N 393 TRP HE3 H N N 394 TRP HZ2 H N N 395 TRP HZ3 H N N 396 TRP HH2 H N N 397 TRP HXT H N N 398 TYR N N N N 399 TYR CA C N S 400 TYR C C N N 401 TYR O O N N 402 TYR CB C N N 403 TYR CG C Y N 404 TYR CD1 C Y N 405 TYR CD2 C Y N 406 TYR CE1 C Y N 407 TYR CE2 C Y N 408 TYR CZ C Y N 409 TYR OH O N N 410 TYR OXT O N N 411 TYR H H N N 412 TYR H2 H N N 413 TYR HA H N N 414 TYR HB2 H N N 415 TYR HB3 H N N 416 TYR HD1 H N N 417 TYR HD2 H N N 418 TYR HE1 H N N 419 TYR HE2 H N N 420 TYR HH H N N 421 TYR HXT H N N 422 VAL N N N N 423 VAL CA C N S 424 VAL C C N N 425 VAL O O N N 426 VAL CB C N N 427 VAL CG1 C N N 428 VAL CG2 C N N 429 VAL OXT O N N 430 VAL H H N N 431 VAL H2 H N N 432 VAL HA H N N 433 VAL HB H N N 434 VAL HG11 H N N 435 VAL HG12 H N N 436 VAL HG13 H N N 437 VAL HG21 H N N 438 VAL HG22 H N N 439 VAL HG23 H N N 440 VAL HXT H N N 441 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 ILE N CA sing N N 174 ILE N H sing N N 175 ILE N H2 sing N N 176 ILE CA C sing N N 177 ILE CA CB sing N N 178 ILE CA HA sing N N 179 ILE C O doub N N 180 ILE C OXT sing N N 181 ILE CB CG1 sing N N 182 ILE CB CG2 sing N N 183 ILE CB HB sing N N 184 ILE CG1 CD1 sing N N 185 ILE CG1 HG12 sing N N 186 ILE CG1 HG13 sing N N 187 ILE CG2 HG21 sing N N 188 ILE CG2 HG22 sing N N 189 ILE CG2 HG23 sing N N 190 ILE CD1 HD11 sing N N 191 ILE CD1 HD12 sing N N 192 ILE CD1 HD13 sing N N 193 ILE OXT HXT sing N N 194 LEU N CA sing N N 195 LEU N H sing N N 196 LEU N H2 sing N N 197 LEU CA C sing N N 198 LEU CA CB sing N N 199 LEU CA HA sing N N 200 LEU C O doub N N 201 LEU C OXT sing N N 202 LEU CB CG sing N N 203 LEU CB HB2 sing N N 204 LEU CB HB3 sing N N 205 LEU CG CD1 sing N N 206 LEU CG CD2 sing N N 207 LEU CG HG sing N N 208 LEU CD1 HD11 sing N N 209 LEU CD1 HD12 sing N N 210 LEU CD1 HD13 sing N N 211 LEU CD2 HD21 sing N N 212 LEU CD2 HD22 sing N N 213 LEU CD2 HD23 sing N N 214 LEU OXT HXT sing N N 215 LYS N CA sing N N 216 LYS N H sing N N 217 LYS N H2 sing N N 218 LYS CA C sing N N 219 LYS CA CB sing N N 220 LYS CA HA sing N N 221 LYS C O doub N N 222 LYS C OXT sing N N 223 LYS CB CG sing N N 224 LYS CB HB2 sing N N 225 LYS CB HB3 sing N N 226 LYS CG CD sing N N 227 LYS CG HG2 sing N N 228 LYS CG HG3 sing N N 229 LYS CD CE sing N N 230 LYS CD HD2 sing N N 231 LYS CD HD3 sing N N 232 LYS CE NZ sing N N 233 LYS CE HE2 sing N N 234 LYS CE HE3 sing N N 235 LYS NZ HZ1 sing N N 236 LYS NZ HZ2 sing N N 237 LYS NZ HZ3 sing N N 238 LYS OXT HXT sing N N 239 MET N CA sing N N 240 MET N H sing N N 241 MET N H2 sing N N 242 MET CA C sing N N 243 MET CA CB sing N N 244 MET CA HA sing N N 245 MET C O doub N N 246 MET C OXT sing N N 247 MET CB CG sing N N 248 MET CB HB2 sing N N 249 MET CB HB3 sing N N 250 MET CG SD sing N N 251 MET CG HG2 sing N N 252 MET CG HG3 sing N N 253 MET SD CE sing N N 254 MET CE HE1 sing N N 255 MET CE HE2 sing N N 256 MET CE HE3 sing N N 257 MET OXT HXT sing N N 258 NAG C1 C2 sing N N 259 NAG C1 O1 sing N N 260 NAG C1 O5 sing N N 261 NAG C1 H1 sing N N 262 NAG C2 C3 sing N N 263 NAG C2 N2 sing N N 264 NAG C2 H2 sing N N 265 NAG C3 C4 sing N N 266 NAG C3 O3 sing N N 267 NAG C3 H3 sing N N 268 NAG C4 C5 sing N N 269 NAG C4 O4 sing N N 270 NAG C4 H4 sing N N 271 NAG C5 C6 sing N N 272 NAG C5 O5 sing N N 273 NAG C5 H5 sing N N 274 NAG C6 O6 sing N N 275 NAG C6 H61 sing N N 276 NAG C6 H62 sing N N 277 NAG C7 C8 sing N N 278 NAG C7 N2 sing N N 279 NAG C7 O7 doub N N 280 NAG C8 H81 sing N N 281 NAG C8 H82 sing N N 282 NAG C8 H83 sing N N 283 NAG N2 HN2 sing N N 284 NAG O1 HO1 sing N N 285 NAG O3 HO3 sing N N 286 NAG O4 HO4 sing N N 287 NAG O6 HO6 sing N N 288 PHE N CA sing N N 289 PHE N H sing N N 290 PHE N H2 sing N N 291 PHE CA C sing N N 292 PHE CA CB sing N N 293 PHE CA HA sing N N 294 PHE C O doub N N 295 PHE C OXT sing N N 296 PHE CB CG sing N N 297 PHE CB HB2 sing N N 298 PHE CB HB3 sing N N 299 PHE CG CD1 doub Y N 300 PHE CG CD2 sing Y N 301 PHE CD1 CE1 sing Y N 302 PHE CD1 HD1 sing N N 303 PHE CD2 CE2 doub Y N 304 PHE CD2 HD2 sing N N 305 PHE CE1 CZ doub Y N 306 PHE CE1 HE1 sing N N 307 PHE CE2 CZ sing Y N 308 PHE CE2 HE2 sing N N 309 PHE CZ HZ sing N N 310 PHE OXT HXT sing N N 311 PRO N CA sing N N 312 PRO N CD sing N N 313 PRO N H sing N N 314 PRO CA C sing N N 315 PRO CA CB sing N N 316 PRO CA HA sing N N 317 PRO C O doub N N 318 PRO C OXT sing N N 319 PRO CB CG sing N N 320 PRO CB HB2 sing N N 321 PRO CB HB3 sing N N 322 PRO CG CD sing N N 323 PRO CG HG2 sing N N 324 PRO CG HG3 sing N N 325 PRO CD HD2 sing N N 326 PRO CD HD3 sing N N 327 PRO OXT HXT sing N N 328 SER N CA sing N N 329 SER N H sing N N 330 SER N H2 sing N N 331 SER CA C sing N N 332 SER CA CB sing N N 333 SER CA HA sing N N 334 SER C O doub N N 335 SER C OXT sing N N 336 SER CB OG sing N N 337 SER CB HB2 sing N N 338 SER CB HB3 sing N N 339 SER OG HG sing N N 340 SER OXT HXT sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue ? ? 2 1 2697049 'Severe acute respiratory syndrome coronavirus 2' ? ? ? ? ? ? 3 2 10090 'Mus musculus' ? ? ? ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 2 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 6 NAG 1 n 6 NAG 2 n 6 BMA 3 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 BMA ? ? BMA ? ? 'SUBJECT OF INVESTIGATION' ? 2 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 8IV8 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_