HEADER STRUCTURAL PROTEIN 27-MAY-23 8JIT TITLE CRYO-EM STRUCTURE OF THE GLP-1R/GCGR DUAL AGONIST MEDI0382-BOUND HUMAN TITLE 2 GCGR-GS COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(S) SUBUNIT ALPHA COMPND 3 ISOFORMS SHORT; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ADENYLATE CYCLASE-STIMULATING G ALPHA PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: MEDI0382; COMPND 9 CHAIN: P; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) SUBUNIT COMPND 13 BETA-1; COMPND 14 CHAIN: B; COMPND 15 SYNONYM: TRANSDUCIN BETA CHAIN 1; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 4; COMPND 18 MOLECULE: GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(O) SUBUNIT COMPND 19 GAMMA-2; COMPND 20 CHAIN: C; COMPND 21 SYNONYM: G GAMMA-I; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 5; COMPND 24 MOLECULE: NANOBODY 35; COMPND 25 CHAIN: N; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 6; COMPND 28 MOLECULE: GLUCAGON RECEPTOR; COMPND 29 CHAIN: R; COMPND 30 SYNONYM: GL-R; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GNAS, GNAS1, GSP; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 MOL_ID: 3; SOURCE 13 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 14 ORGANISM_COMMON: NORWAY RAT; SOURCE 15 ORGANISM_TAXID: 10116; SOURCE 16 GENE: GNB1; SOURCE 17 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 19 MOL_ID: 4; SOURCE 20 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 21 ORGANISM_COMMON: CATTLE; SOURCE 22 ORGANISM_TAXID: 9913; SOURCE 23 GENE: GNG2; SOURCE 24 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 26 MOL_ID: 5; SOURCE 27 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 28 ORGANISM_TAXID: 562; SOURCE 29 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 31 MOL_ID: 6; SOURCE 32 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 33 ORGANISM_COMMON: HUMAN; SOURCE 34 ORGANISM_TAXID: 9606; SOURCE 35 GENE: GCGR; SOURCE 36 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS G PROTEIN-COUPLED RECEPTOR, LIGAND RECOGNITION, RECEPTOR ACTIVATION, KEYWDS 2 UNIMOLECULAR DUAL AGONIST, STRUCTURAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR L.YANG,Q.T.ZHOU,A.T.DAI,F.H.ZHAO,R.L.CHANG,T.L.YING,B.L.WU,D.H.YANG, AUTHOR 2 M.W.WANG,Z.T.CONG REVDAT 1 06-SEP-23 8JIT 0 JRNL AUTH Y.LI,Q.ZHOU,A.DAI,F.ZHAO,R.CHANG,T.YING,B.WU,D.YANG, JRNL AUTH 2 M.W.WANG,Z.CONG JRNL TITL STRUCTURAL ANALYSIS OF THE DUAL AGONISM AT GLP-1R AND GCGR. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 96120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 37549266 JRNL DOI 10.1073/PNAS.2303696120 REMARK 2 REMARK 2 RESOLUTION. 2.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.910 REMARK 3 NUMBER OF PARTICLES : 657161 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8JIT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 31-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1300037984. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM STRUCTURE OF THE GLP REMARK 245 -1R/GCGR DUAL AGONIST MEDI0382- REMARK 245 BOUND HUMAN GCGR-GS COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 8000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : OTHER REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, B, C, N, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 CYS A -3 REMARK 465 LEU A -2 REMARK 465 GLY A -1 REMARK 465 ASN A 0 REMARK 465 SER A 1 REMARK 465 LYS A 2 REMARK 465 GLN A 52A REMARK 465 MET A 52B REMARK 465 ARG A 52C REMARK 465 ILE A 52D REMARK 465 LEU A 52E REMARK 465 HIS A 52F REMARK 465 VAL A 52G REMARK 465 ASN A 52H REMARK 465 GLY A 52I REMARK 465 PHE A 52J REMARK 465 ASN A 52K REMARK 465 GLY A 52L REMARK 465 GLU A 52M REMARK 465 GLY A 52N REMARK 465 GLY A 52O REMARK 465 GLU A 52P REMARK 465 GLU A 52Q REMARK 465 ASP A 52R REMARK 465 PRO A 52S REMARK 465 GLN A 52T REMARK 465 ALA A 52U REMARK 465 ALA A 52V REMARK 465 ARG A 52W REMARK 465 SER A 52X REMARK 465 ASN A 52Y REMARK 465 SER A 52Z REMARK 465 ASP A 53A REMARK 465 GLY A 53B REMARK 465 GLU A 53C REMARK 465 LYS A 53D REMARK 465 ALA A 53E REMARK 465 THR A 53F REMARK 465 LYS A 53G REMARK 465 VAL A 53H REMARK 465 GLN A 53I REMARK 465 ASP A 53J REMARK 465 ILE A 53K REMARK 465 LYS A 53L REMARK 465 ASN A 53M REMARK 465 ASN A 53N REMARK 465 LEU A 53O REMARK 465 LYS A 53P REMARK 465 GLU A 53Q REMARK 465 ALA A 53R REMARK 465 ILE A 53S REMARK 465 GLU A 53T REMARK 465 THR A 53U REMARK 465 ILE A 53V REMARK 465 VAL A 53W REMARK 465 ALA A 53X REMARK 465 ALA A 53Y REMARK 465 MET A 53Z REMARK 465 SER A 54A REMARK 465 ASN A 54B REMARK 465 LEU A 54C REMARK 465 VAL A 54D REMARK 465 PRO A 54E REMARK 465 PRO A 54F REMARK 465 VAL A 54G REMARK 465 GLU A 54H REMARK 465 LEU A 54I REMARK 465 ALA A 54J REMARK 465 ASN A 54K REMARK 465 PRO A 54L REMARK 465 GLU A 54M REMARK 465 ASN A 54N REMARK 465 GLN A 54O REMARK 465 PHE A 54P REMARK 465 ARG A 54Q REMARK 465 VAL A 54R REMARK 465 ASP A 54S REMARK 465 TYR A 54T REMARK 465 ILE A 54U REMARK 465 LEU A 54V REMARK 465 SER A 54W REMARK 465 VAL A 54X REMARK 465 MET A 54Y REMARK 465 ASN A 54Z REMARK 465 VAL A 55A REMARK 465 PRO A 55B REMARK 465 ASP A 55C REMARK 465 PHE A 55D REMARK 465 ASP A 55E REMARK 465 PHE A 55F REMARK 465 PRO A 55G REMARK 465 PRO A 55H REMARK 465 GLU A 55I REMARK 465 PHE A 55J REMARK 465 TYR A 55K REMARK 465 GLU A 55L REMARK 465 HIS A 55M REMARK 465 ALA A 55N REMARK 465 LYS A 55O REMARK 465 ALA A 55P REMARK 465 LEU A 55Q REMARK 465 TRP A 55R REMARK 465 GLU A 55S REMARK 465 ASP A 55T REMARK 465 GLU A 55U REMARK 465 GLY A 55V REMARK 465 VAL A 55W REMARK 465 ARG A 55X REMARK 465 ALA A 55Y REMARK 465 CYS A 55Z REMARK 465 TYR A 56A REMARK 465 GLU A 56B REMARK 465 ARG A 56C REMARK 465 SER A 56D REMARK 465 ASN A 56E REMARK 465 GLU A 56F REMARK 465 TYR A 56G REMARK 465 GLN A 56H REMARK 465 LEU A 56I REMARK 465 ILE A 56J REMARK 465 ASP A 56K REMARK 465 CYS A 56L REMARK 465 ALA A 56M REMARK 465 GLN A 56N REMARK 465 TYR A 56O REMARK 465 PHE A 56P REMARK 465 LEU A 56Q REMARK 465 ASP A 56R REMARK 465 LYS A 56S REMARK 465 ILE A 56T REMARK 465 ASP A 56U REMARK 465 VAL A 56V REMARK 465 ILE A 56W REMARK 465 LYS A 56X REMARK 465 GLN A 56Y REMARK 465 ALA A 56Z REMARK 465 ASP A 57A REMARK 465 TYR A 57B REMARK 465 VAL A 57C REMARK 465 PRO A 57D REMARK 465 SER A 57E REMARK 465 ASP A 57F REMARK 465 GLN A 57G REMARK 465 ASP A 57H REMARK 465 LEU A 57I REMARK 465 LEU A 57J REMARK 465 ARG A 57K REMARK 465 CYS A 57L REMARK 465 ARG A 57M REMARK 465 VAL A 57N REMARK 465 LEU A 57O REMARK 465 THR A 57P REMARK 465 SER A 57Q REMARK 465 GLY A 57R REMARK 465 SER A 236 REMARK 465 TYR A 237 REMARK 465 ASN A 238 REMARK 465 MET A 239 REMARK 465 VAL A 240 REMARK 465 ILE A 241 REMARK 465 ARG A 242 REMARK 465 GLU A 243 REMARK 465 ASP A 244 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 LEU B -1 REMARK 465 LEU B 0 REMARK 465 GLN B 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 THR C 6 REMARK 465 GLU C 63 REMARK 465 LYS C 64 REMARK 465 LYS C 65 REMARK 465 PHE C 66 REMARK 465 PHE C 67 REMARK 465 CYS C 68 REMARK 465 ALA C 69 REMARK 465 ILE C 70 REMARK 465 LEU C 71 REMARK 465 MET N -1 REMARK 465 ALA N 0 REMARK 465 HIS N 129 REMARK 465 HIS N 130 REMARK 465 HIS N 131 REMARK 465 HIS N 132 REMARK 465 HIS N 133 REMARK 465 HIS N 134 REMARK 465 GLU N 135 REMARK 465 PRO N 136 REMARK 465 GLU N 137 REMARK 465 ALA N 138 REMARK 465 LYS R 422 REMARK 465 VAL R 423 REMARK 465 LEU R 424 REMARK 465 TRP R 425 REMARK 465 GLU R 426 REMARK 465 GLU R 427 REMARK 465 ARG R 428 REMARK 465 ASN R 429 REMARK 465 THR R 430 REMARK 465 SER R 431 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 52 CG CD CE NZ REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 200 CG CD CE NZ REMARK 470 ASP A 224 CG OD1 OD2 REMARK 470 LYS A 284 CG CD CE NZ REMARK 470 GLU A 293 CG CD OE1 OE2 REMARK 470 GLU A 298 CG CD OE1 OE2 REMARK 470 GLU A 306 CG CD OE1 OE2 REMARK 470 ASP A 338 CG OD1 OD2 REMARK 470 LEU B 4 CG CD1 CD2 REMARK 470 GLN B 13 CG CD OE1 NE2 REMARK 470 ARG B 129 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 130 CG CD OE1 OE2 REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 GLU B 215 CG CD OE1 OE2 REMARK 470 THR B 243 OG1 CG2 REMARK 470 ARG B 256 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 9 CG1 CG2 CD1 REMARK 470 ARG C 62 CG CD NE CZ NH1 NH2 REMARK 470 GLN N 3 CG CD OE1 NE2 REMARK 470 ASP N 106 CG OD1 OD2 REMARK 470 THR N 113 OG1 CG2 REMARK 470 THR R 54 OG1 CG2 REMARK 470 GLU R 55 CG CD OE1 OE2 REMARK 470 LYS R 64 CG CD CE NZ REMARK 470 ARG R 116 CG CD NE CZ NH1 NH2 REMARK 470 GLN R 120 CG CD OE1 NE2 REMARK 470 LYS R 168 CG CD CE NZ REMARK 470 LYS R 205 CG CD CE NZ REMARK 470 ILE R 206 CG1 CG2 CD1 REMARK 470 ASP R 208 CG OD1 OD2 REMARK 470 ASP R 209 CG OD1 OD2 REMARK 470 LEU R 210 CG CD1 CD2 REMARK 470 MET R 276 CE REMARK 470 LYS R 286 CG CD CE NZ REMARK 470 ASN R 300 CG OD1 ND2 REMARK 470 HIS R 339 CG ND1 CD2 CE1 NE2 REMARK 470 HIS R 340 CG ND1 CD2 CE1 NE2 REMARK 470 THR R 341 OG1 CG2 REMARK 470 ASP R 342 CG OD1 OD2 REMARK 470 TYR R 343 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE R 365 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE R 367 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP R 370 CG OD1 OD2 REMARK 470 GLU R 371 CG CD OE1 OE2 REMARK 470 ARG R 419 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 246 -89.09 -170.63 REMARK 500 THR A 247 -166.68 178.05 REMARK 500 ASN A 248 75.24 -65.71 REMARK 500 LYS A 264 -8.26 75.98 REMARK 500 GLN B 75 31.20 -85.58 REMARK 500 SER B 227 -168.01 -119.95 REMARK 500 CYS B 233 148.77 -172.63 REMARK 500 ALA B 309 -114.70 -85.23 REMARK 500 TRP B 332 21.53 -69.26 REMARK 500 PRO N 14 98.15 -61.25 REMARK 500 SER N 85 62.42 36.37 REMARK 500 ALA N 92 -176.11 -170.71 REMARK 500 VAL N 110 30.52 -96.31 REMARK 500 THR N 111 -169.47 -73.52 REMARK 500 SER N 112 -167.24 -74.09 REMARK 500 TYR N 117 49.85 -83.16 REMARK 500 ASP R 63 50.39 -90.96 REMARK 500 LYS R 64 26.13 48.82 REMARK 500 ARG R 334 46.60 -91.02 REMARK 500 LYS R 349 -60.64 -121.60 REMARK 500 PRO R 356 0.49 -51.67 REMARK 500 LEU R 357 -7.72 -51.30 REMARK 500 LEU R 358 -68.03 -125.96 REMARK 500 PHE R 384 -77.51 -50.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-36327 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE GLP-1R/GCGR DUAL AGONIST MEDI0382-BOUND REMARK 900 HUMAN GCGR-GS COMPLEX DBREF 8JIT A -5 378 UNP P63092 GNAS2_HUMAN 1 394 DBREF 8JIT P 1 29 PDB 8JIT 8JIT 1 29 DBREF 8JIT B 2 340 UNP P54311 GBB1_RAT 2 340 DBREF 8JIT C 2 71 UNP P63212 GBG2_BOVIN 2 71 DBREF 8JIT N -1 138 PDB 8JIT 8JIT -1 138 DBREF 8JIT R 27 431 UNP P47871 GLR_HUMAN 27 431 SEQADV 8JIT ASN A 48 UNP P63092 SER 54 CONFLICT SEQADV 8JIT ALA A 210 UNP P63092 GLY 226 CONFLICT SEQADV 8JIT ALA A 252 UNP P63092 GLU 268 CONFLICT SEQADV 8JIT LYS A 255 UNP P63092 ASN 271 CONFLICT SEQADV 8JIT ASP A 258 UNP P63092 LYS 274 CONFLICT SEQADV 8JIT LYS A 264 UNP P63092 ARG 280 CONFLICT SEQADV 8JIT ASP A 268 UNP P63092 THR 284 CONFLICT SEQADV 8JIT THR A 269 UNP P63092 ILE 285 CONFLICT SEQADV 8JIT MET B -4 UNP P54311 INITIATING METHIONINE SEQADV 8JIT GLY B -3 UNP P54311 EXPRESSION TAG SEQADV 8JIT SER B -2 UNP P54311 EXPRESSION TAG SEQADV 8JIT LEU B -1 UNP P54311 EXPRESSION TAG SEQADV 8JIT LEU B 0 UNP P54311 EXPRESSION TAG SEQADV 8JIT GLN B 1 UNP P54311 EXPRESSION TAG SEQRES 1 A 394 MET GLY CYS LEU GLY ASN SER LYS THR GLU ASP GLN ARG SEQRES 2 A 394 ASN GLU GLU LYS ALA GLN ARG GLU ALA ASN LYS LYS ILE SEQRES 3 A 394 GLU LYS GLN LEU GLN LYS ASP LYS GLN VAL TYR ARG ALA SEQRES 4 A 394 THR HIS ARG LEU LEU LEU LEU GLY ALA GLY GLU SER GLY SEQRES 5 A 394 LYS ASN THR ILE VAL LYS GLN MET ARG ILE LEU HIS VAL SEQRES 6 A 394 ASN GLY PHE ASN GLY GLU GLY GLY GLU GLU ASP PRO GLN SEQRES 7 A 394 ALA ALA ARG SER ASN SER ASP GLY GLU LYS ALA THR LYS SEQRES 8 A 394 VAL GLN ASP ILE LYS ASN ASN LEU LYS GLU ALA ILE GLU SEQRES 9 A 394 THR ILE VAL ALA ALA MET SER ASN LEU VAL PRO PRO VAL SEQRES 10 A 394 GLU LEU ALA ASN PRO GLU ASN GLN PHE ARG VAL ASP TYR SEQRES 11 A 394 ILE LEU SER VAL MET ASN VAL PRO ASP PHE ASP PHE PRO SEQRES 12 A 394 PRO GLU PHE TYR GLU HIS ALA LYS ALA LEU TRP GLU ASP SEQRES 13 A 394 GLU GLY VAL ARG ALA CYS TYR GLU ARG SER ASN GLU TYR SEQRES 14 A 394 GLN LEU ILE ASP CYS ALA GLN TYR PHE LEU ASP LYS ILE SEQRES 15 A 394 ASP VAL ILE LYS GLN ALA ASP TYR VAL PRO SER ASP GLN SEQRES 16 A 394 ASP LEU LEU ARG CYS ARG VAL LEU THR SER GLY ILE PHE SEQRES 17 A 394 GLU THR LYS PHE GLN VAL ASP LYS VAL ASN PHE HIS MET SEQRES 18 A 394 PHE ASP VAL GLY ALA GLN ARG ASP GLU ARG ARG LYS TRP SEQRES 19 A 394 ILE GLN CYS PHE ASN ASP VAL THR ALA ILE ILE PHE VAL SEQRES 20 A 394 VAL ALA SER SER SER TYR ASN MET VAL ILE ARG GLU ASP SEQRES 21 A 394 ASN GLN THR ASN ARG LEU GLN ALA ALA LEU LYS LEU PHE SEQRES 22 A 394 ASP SER ILE TRP ASN ASN LYS TRP LEU ARG ASP THR SER SEQRES 23 A 394 VAL ILE LEU PHE LEU ASN LYS GLN ASP LEU LEU ALA GLU SEQRES 24 A 394 LYS VAL LEU ALA GLY LYS SER LYS ILE GLU ASP TYR PHE SEQRES 25 A 394 PRO GLU PHE ALA ARG TYR THR THR PRO GLU ASP ALA THR SEQRES 26 A 394 PRO GLU PRO GLY GLU ASP PRO ARG VAL THR ARG ALA LYS SEQRES 27 A 394 TYR PHE ILE ARG ASP GLU PHE LEU ARG ILE SER THR ALA SEQRES 28 A 394 SER GLY ASP GLY ARG HIS TYR CYS TYR PRO HIS PHE THR SEQRES 29 A 394 CYS ALA VAL ASP THR GLU ASN ILE ARG ARG VAL PHE ASN SEQRES 30 A 394 ASP CYS ARG ASP ILE ILE GLN ARG MET HIS LEU ARG GLN SEQRES 31 A 394 TYR GLU LEU LEU SEQRES 1 P 29 HIS SER GLN GLY THR PHE THR SER ASP LYS SER GLU TYR SEQRES 2 P 29 LEU ASP SER GLU ARG ALA ARG ASP PHE VAL ALA TRP LEU SEQRES 3 P 29 GLU ALA GLY SEQRES 1 B 345 MET GLY SER LEU LEU GLN SER GLU LEU ASP GLN LEU ARG SEQRES 2 B 345 GLN GLU ALA GLU GLN LEU LYS ASN GLN ILE ARG ASP ALA SEQRES 3 B 345 ARG LYS ALA CYS ALA ASP ALA THR LEU SER GLN ILE THR SEQRES 4 B 345 ASN ASN ILE ASP PRO VAL GLY ARG ILE GLN MET ARG THR SEQRES 5 B 345 ARG ARG THR LEU ARG GLY HIS LEU ALA LYS ILE TYR ALA SEQRES 6 B 345 MET HIS TRP GLY THR ASP SER ARG LEU LEU VAL SER ALA SEQRES 7 B 345 SER GLN ASP GLY LYS LEU ILE ILE TRP ASP SER TYR THR SEQRES 8 B 345 THR ASN LYS VAL HIS ALA ILE PRO LEU ARG SER SER TRP SEQRES 9 B 345 VAL MET THR CYS ALA TYR ALA PRO SER GLY ASN TYR VAL SEQRES 10 B 345 ALA CYS GLY GLY LEU ASP ASN ILE CYS SER ILE TYR ASN SEQRES 11 B 345 LEU LYS THR ARG GLU GLY ASN VAL ARG VAL SER ARG GLU SEQRES 12 B 345 LEU ALA GLY HIS THR GLY TYR LEU SER CYS CYS ARG PHE SEQRES 13 B 345 LEU ASP ASP ASN GLN ILE VAL THR SER SER GLY ASP THR SEQRES 14 B 345 THR CYS ALA LEU TRP ASP ILE GLU THR GLY GLN GLN THR SEQRES 15 B 345 THR THR PHE THR GLY HIS THR GLY ASP VAL MET SER LEU SEQRES 16 B 345 SER LEU ALA PRO ASP THR ARG LEU PHE VAL SER GLY ALA SEQRES 17 B 345 CYS ASP ALA SER ALA LYS LEU TRP ASP VAL ARG GLU GLY SEQRES 18 B 345 MET CYS ARG GLN THR PHE THR GLY HIS GLU SER ASP ILE SEQRES 19 B 345 ASN ALA ILE CYS PHE PHE PRO ASN GLY ASN ALA PHE ALA SEQRES 20 B 345 THR GLY SER ASP ASP ALA THR CYS ARG LEU PHE ASP LEU SEQRES 21 B 345 ARG ALA ASP GLN GLU LEU MET THR TYR SER HIS ASP ASN SEQRES 22 B 345 ILE ILE CYS GLY ILE THR SER VAL SER PHE SER LYS SER SEQRES 23 B 345 GLY ARG LEU LEU LEU ALA GLY TYR ASP ASP PHE ASN CYS SEQRES 24 B 345 ASN VAL TRP ASP ALA LEU LYS ALA ASP ARG ALA GLY VAL SEQRES 25 B 345 LEU ALA GLY HIS ASP ASN ARG VAL SER CYS LEU GLY VAL SEQRES 26 B 345 THR ASP ASP GLY MET ALA VAL ALA THR GLY SER TRP ASP SEQRES 27 B 345 SER PHE LEU LYS ILE TRP ASN SEQRES 1 C 70 ALA SER ASN ASN THR ALA SER ILE ALA GLN ALA ARG LYS SEQRES 2 C 70 LEU VAL GLU GLN LEU LYS MET GLU ALA ASN ILE ASP ARG SEQRES 3 C 70 ILE LYS VAL SER LYS ALA ALA ALA ASP LEU MET ALA TYR SEQRES 4 C 70 CYS GLU ALA HIS ALA LYS GLU ASP PRO LEU LEU THR PRO SEQRES 5 C 70 VAL PRO ALA SER GLU ASN PRO PHE ARG GLU LYS LYS PHE SEQRES 6 C 70 PHE CYS ALA ILE LEU SEQRES 1 N 140 MET ALA GLN VAL GLN LEU GLN GLU SER GLY GLY GLY LEU SEQRES 2 N 140 VAL GLN PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SEQRES 3 N 140 SER GLY PHE THR PHE SER ASN TYR LYS MET ASN TRP VAL SEQRES 4 N 140 ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ASP SEQRES 5 N 140 ILE SER GLN SER GLY ALA SER ILE SER TYR THR GLY SER SEQRES 6 N 140 VAL LYS GLY ARG PHE THR ILE SER ARG ASP ASN ALA LYS SEQRES 7 N 140 ASN THR LEU TYR LEU GLN MET ASN SER LEU LYS PRO GLU SEQRES 8 N 140 ASP THR ALA VAL TYR TYR CYS ALA ARG CYS PRO ALA PRO SEQRES 9 N 140 PHE THR ARG ASP CYS PHE ASP VAL THR SER THR THR TYR SEQRES 10 N 140 ALA TYR ARG GLY GLN GLY THR GLN VAL THR VAL SER SER SEQRES 11 N 140 HIS HIS HIS HIS HIS HIS GLU PRO GLU ALA SEQRES 1 R 405 GLN VAL MET ASP PHE LEU PHE GLU LYS TRP LYS LEU TYR SEQRES 2 R 405 GLY ASP GLN CYS HIS HIS ASN LEU SER LEU LEU PRO PRO SEQRES 3 R 405 PRO THR GLU LEU VAL CYS ASN ARG THR PHE ASP LYS TYR SEQRES 4 R 405 SER CYS TRP PRO ASP THR PRO ALA ASN THR THR ALA ASN SEQRES 5 R 405 ILE SER CYS PRO TRP TYR LEU PRO TRP HIS HIS LYS VAL SEQRES 6 R 405 GLN HIS ARG PHE VAL PHE LYS ARG CYS GLY PRO ASP GLY SEQRES 7 R 405 GLN TRP VAL ARG GLY PRO ARG GLY GLN PRO TRP ARG ASP SEQRES 8 R 405 ALA SER GLN CYS GLN MET ASP GLY GLU GLU ILE GLU VAL SEQRES 9 R 405 GLN LYS GLU VAL ALA LYS MET TYR SER SER PHE GLN VAL SEQRES 10 R 405 MET TYR THR VAL GLY TYR SER LEU SER LEU GLY ALA LEU SEQRES 11 R 405 LEU LEU ALA LEU ALA ILE LEU GLY GLY LEU SER LYS LEU SEQRES 12 R 405 HIS CYS THR ARG ASN ALA ILE HIS ALA ASN LEU PHE ALA SEQRES 13 R 405 SER PHE VAL LEU LYS ALA SER SER VAL LEU VAL ILE ASP SEQRES 14 R 405 GLY LEU LEU ARG THR ARG TYR SER GLN LYS ILE GLY ASP SEQRES 15 R 405 ASP LEU SER VAL SER THR TRP LEU SER ASP GLY ALA VAL SEQRES 16 R 405 ALA GLY CYS ARG VAL ALA ALA VAL PHE MET GLN TYR GLY SEQRES 17 R 405 ILE VAL ALA ASN TYR CYS TRP LEU LEU VAL GLU GLY LEU SEQRES 18 R 405 TYR LEU HIS ASN LEU LEU GLY LEU ALA THR LEU PRO GLU SEQRES 19 R 405 ARG SER PHE PHE SER LEU TYR LEU GLY ILE GLY TRP GLY SEQRES 20 R 405 ALA PRO MET LEU PHE VAL VAL PRO TRP ALA VAL VAL LYS SEQRES 21 R 405 CYS LEU PHE GLU ASN VAL GLN CYS TRP THR SER ASN ASP SEQRES 22 R 405 ASN MET GLY PHE TRP TRP ILE LEU ARG PHE PRO VAL PHE SEQRES 23 R 405 LEU ALA ILE LEU ILE ASN PHE PHE ILE PHE VAL ARG ILE SEQRES 24 R 405 VAL GLN LEU LEU VAL ALA LYS LEU ARG ALA ARG GLN MET SEQRES 25 R 405 HIS HIS THR ASP TYR LYS PHE ARG LEU ALA LYS SER THR SEQRES 26 R 405 LEU THR LEU ILE PRO LEU LEU GLY VAL HIS GLU VAL VAL SEQRES 27 R 405 PHE ALA PHE VAL THR ASP GLU HIS ALA GLN GLY THR LEU SEQRES 28 R 405 ARG SER ALA LYS LEU PHE PHE ASP LEU PHE LEU SER SER SEQRES 29 R 405 PHE GLN GLY LEU LEU VAL ALA VAL LEU TYR CYS PHE LEU SEQRES 30 R 405 ASN LYS GLU VAL GLN SER GLU LEU ARG ARG ARG TRP HIS SEQRES 31 R 405 ARG TRP ARG LEU GLY LYS VAL LEU TRP GLU GLU ARG ASN SEQRES 32 R 405 THR SER HET D6M P 101 60 HETNAM D6M N-HEXADECANOYL-L-GLUTAMIC ACID FORMUL 7 D6M C21 H39 N O5 HELIX 1 AA1 THR A 3 THR A 34 1 32 HELIX 2 AA2 GLY A 46 ILE A 50 5 5 HELIX 3 AA3 LYS A 217 PHE A 222 5 6 HELIX 4 AA4 ASN A 248 ASN A 262 1 15 HELIX 5 AA5 GLN A 278 ALA A 282 5 5 HELIX 6 AA6 GLU A 283 GLY A 288 1 6 HELIX 7 AA7 LYS A 291 PHE A 296 1 6 HELIX 8 AA8 PRO A 297 TYR A 302 5 6 HELIX 9 AA9 ASP A 315 SER A 336 1 22 HELIX 10 AB1 VAL A 351 TYR A 375 1 25 HELIX 11 AB2 SER P 2 GLY P 29 1 28 HELIX 12 AB3 LEU B 4 ALA B 26 1 23 HELIX 13 AB4 THR B 29 THR B 34 1 6 HELIX 14 AB5 ARG B 256 ASP B 258 5 3 HELIX 15 AB6 SER C 8 MET C 21 1 14 HELIX 16 AB7 LYS C 29 HIS C 44 1 16 HELIX 17 AB8 THR N 28 TYR N 32 5 5 HELIX 18 AB9 GLY N 62 LYS N 65 5 4 HELIX 19 AC1 LYS N 87 THR N 91 5 5 HELIX 20 AC2 VAL R 28 LEU R 49 1 22 HELIX 21 AC3 TRP R 87 VAL R 91 5 5 HELIX 22 AC4 GLU R 126 GLY R 165 1 40 HELIX 23 AC5 CYS R 171 TYR R 202 1 32 HELIX 24 AC6 ASP R 208 SER R 217 1 10 HELIX 25 AC7 ALA R 220 LEU R 255 1 36 HELIX 26 AC8 PHE R 263 TRP R 272 1 10 HELIX 27 AC9 GLY R 273 PHE R 289 1 17 HELIX 28 AD1 ASN R 300 PHE R 303 5 4 HELIX 29 AD2 TRP R 304 ILE R 317 1 14 HELIX 30 AD3 ASN R 318 ARG R 334 1 17 HELIX 31 AD4 TYR R 343 LEU R 354 1 12 HELIX 32 AD5 GLN R 374 PHE R 402 1 29 HELIX 33 AD6 ASN R 404 LEU R 420 1 17 SHEET 1 AA1 6 THR A 194 VAL A 198 0 SHEET 2 AA1 6 VAL A 201 ASP A 207 -1 O PHE A 203 N PHE A 196 SHEET 3 AA1 6 HIS A 35 GLY A 41 1 N LEU A 37 O PHE A 206 SHEET 4 AA1 6 ALA A 227 ALA A 233 1 O ILE A 229 N LEU A 38 SHEET 5 AA1 6 SER A 270 ASN A 276 1 O ILE A 272 N PHE A 230 SHEET 6 AA1 6 CYS A 343 PHE A 347 1 O TYR A 344 N LEU A 273 SHEET 1 AA2 4 THR B 47 LEU B 51 0 SHEET 2 AA2 4 LEU B 336 TRP B 339 -1 O ILE B 338 N ARG B 48 SHEET 3 AA2 4 VAL B 327 SER B 331 -1 N VAL B 327 O TRP B 339 SHEET 4 AA2 4 VAL B 315 VAL B 320 -1 N GLY B 319 O ALA B 328 SHEET 1 AA3 4 ILE B 58 TRP B 63 0 SHEET 2 AA3 4 LEU B 70 SER B 74 -1 O ALA B 73 N ALA B 60 SHEET 3 AA3 4 LYS B 78 ILE B 81 -1 O ILE B 80 N SER B 72 SHEET 4 AA3 4 HIS B 91 PRO B 94 -1 O ILE B 93 N LEU B 79 SHEET 1 AA4 4 VAL B 100 TYR B 105 0 SHEET 2 AA4 4 TYR B 111 GLY B 116 -1 O ALA B 113 N ALA B 104 SHEET 3 AA4 4 CYS B 121 ASN B 125 -1 O SER B 122 N CYS B 114 SHEET 4 AA4 4 ARG B 134 LEU B 139 -1 O ARG B 137 N ILE B 123 SHEET 1 AA5 4 CYS B 149 PHE B 151 0 SHEET 2 AA5 4 GLN B 156 THR B 159 -1 O VAL B 158 N ARG B 150 SHEET 3 AA5 4 THR B 165 ASP B 170 -1 O TRP B 169 N ILE B 157 SHEET 4 AA5 4 GLN B 175 THR B 181 -1 O THR B 177 N LEU B 168 SHEET 1 AA6 4 VAL B 187 LEU B 192 0 SHEET 2 AA6 4 LEU B 198 ALA B 203 -1 O VAL B 200 N SER B 191 SHEET 3 AA6 4 SER B 207 ASP B 212 -1 O TRP B 211 N PHE B 199 SHEET 4 AA6 4 MET B 217 THR B 223 -1 O PHE B 222 N ALA B 208 SHEET 1 AA7 4 ILE B 229 PHE B 234 0 SHEET 2 AA7 4 ALA B 240 SER B 245 -1 O GLY B 244 N ALA B 231 SHEET 3 AA7 4 CYS B 250 ASP B 254 -1 O PHE B 253 N PHE B 241 SHEET 4 AA7 4 GLN B 259 TYR B 264 -1 O LEU B 261 N LEU B 252 SHEET 1 AA8 4 ILE B 273 PHE B 278 0 SHEET 2 AA8 4 LEU B 284 TYR B 289 -1 O LEU B 286 N SER B 277 SHEET 3 AA8 4 CYS B 294 ASP B 298 -1 O TRP B 297 N LEU B 285 SHEET 4 AA8 4 VAL B 307 LEU B 308 -1 O LEU B 308 N CYS B 294 SHEET 1 AA9 4 GLN N 3 SER N 7 0 SHEET 2 AA9 4 LEU N 18 SER N 25 -1 O SER N 21 N SER N 7 SHEET 3 AA9 4 THR N 78 MET N 83 -1 O MET N 83 N LEU N 18 SHEET 4 AA9 4 PHE N 68 ASP N 73 -1 N ASP N 73 O THR N 78 SHEET 1 AB1 6 LEU N 11 VAL N 12 0 SHEET 2 AB1 6 THR N 122 VAL N 126 1 O THR N 125 N VAL N 12 SHEET 3 AB1 6 ALA N 92 ARG N 98 -1 N ALA N 92 O VAL N 124 SHEET 4 AB1 6 MET N 34 GLN N 39 -1 N VAL N 37 O TYR N 95 SHEET 5 AB1 6 LEU N 45 ILE N 51 -1 O GLU N 46 N ARG N 38 SHEET 6 AB1 6 ILE N 58 TYR N 60 -1 O SER N 59 N ASP N 50 SHEET 1 AB2 2 THR R 75 SER R 80 0 SHEET 2 AB2 2 PHE R 95 CYS R 100 -1 O LYS R 98 N ALA R 77 SSBOND 1 CYS N 22 CYS N 96 1555 1555 2.03 SSBOND 2 CYS N 99 CYS N 107 1555 1555 2.05 SSBOND 3 CYS R 43 CYS R 67 1555 1555 2.03 SSBOND 4 CYS R 58 CYS R 100 1555 1555 2.04 SSBOND 5 CYS R 81 CYS R 121 1555 1555 2.03 SSBOND 6 CYS R 224 CYS R 294 1555 1555 2.03 LINK NZ LYS P 10 C07 D6M P 101 1555 1555 1.34 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000