data_8JVT # _entry.id 8JVT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8JVT pdb_00008jvt 10.2210/pdb8jvt/pdb WWPDB D_1300038841 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-03 2 'Structure model' 1 1 2024-08-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 2 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8JVT _pdbx_database_status.recvd_initial_deposition_date 2023-06-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email shunsuke.tagami@riken.jp _pdbx_contact_author.name_first Shunsuke _pdbx_contact_author.name_last Tagami _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1720-3627 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yagi, S.' 1 ? 'Tagami, S.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 5938 _citation.page_last 5938 _citation.title 'An ancestral fold reveals the evolutionary link between RNA polymerase and ribosomal proteins.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-50013-9 _citation.pdbx_database_id_PubMed 39025855 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yagi, S.' 1 0000-0002-7117-3318 primary 'Tagami, S.' 2 0000-0002-1720-3627 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man mkaL2_v1 6010.080 6 ? ? ? ? 2 water nat water 18.015 23 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GPMPGKKVVARVVELLHDPARNAPVARVRFEDGEERLILVPEGVKVGDVVEVKKV _entity_poly.pdbx_seq_one_letter_code_can GPMPGKKVVARVVELLHDPARNAPVARVRFEDGEERLILVPEGVKVGDVVEVKKV _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 MET n 1 4 PRO n 1 5 GLY n 1 6 LYS n 1 7 LYS n 1 8 VAL n 1 9 VAL n 1 10 ALA n 1 11 ARG n 1 12 VAL n 1 13 VAL n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 HIS n 1 18 ASP n 1 19 PRO n 1 20 ALA n 1 21 ARG n 1 22 ASN n 1 23 ALA n 1 24 PRO n 1 25 VAL n 1 26 ALA n 1 27 ARG n 1 28 VAL n 1 29 ARG n 1 30 PHE n 1 31 GLU n 1 32 ASP n 1 33 GLY n 1 34 GLU n 1 35 GLU n 1 36 ARG n 1 37 LEU n 1 38 ILE n 1 39 LEU n 1 40 VAL n 1 41 PRO n 1 42 GLU n 1 43 GLY n 1 44 VAL n 1 45 LYS n 1 46 VAL n 1 47 GLY n 1 48 ASP n 1 49 VAL n 1 50 VAL n 1 51 GLU n 1 52 VAL n 1 53 LYS n 1 54 LYS n 1 55 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 55 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 MET 3 3 ? ? ? A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 PRO 24 24 24 PRO PRO A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 VAL 50 50 50 VAL VAL A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 VAL 55 55 55 VAL VAL A . n B 1 1 GLY 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 MET 3 3 ? ? ? B . n B 1 4 PRO 4 4 ? ? ? B . n B 1 5 GLY 5 5 5 GLY GLY B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 ARG 11 11 11 ARG ARG B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 HIS 17 17 17 HIS HIS B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 ASN 22 22 22 ASN ASN B . n B 1 23 ALA 23 23 23 ALA ALA B . n B 1 24 PRO 24 24 24 PRO PRO B . n B 1 25 VAL 25 25 25 VAL VAL B . n B 1 26 ALA 26 26 26 ALA ALA B . n B 1 27 ARG 27 27 27 ARG ARG B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 ARG 29 29 29 ARG ARG B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 GLU 31 31 31 GLU GLU B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 ARG 36 36 36 ARG ARG B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 VAL 40 40 40 VAL VAL B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 GLU 42 42 42 GLU GLU B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 VAL 44 44 44 VAL VAL B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 VAL 46 46 46 VAL VAL B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 VAL 50 50 50 VAL VAL B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 LYS 53 53 53 LYS LYS B . n B 1 54 LYS 54 54 54 LYS LYS B . n B 1 55 VAL 55 55 55 VAL VAL B . n C 1 1 GLY 1 1 ? ? ? C . n C 1 2 PRO 2 2 ? ? ? C . n C 1 3 MET 3 3 ? ? ? C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 GLY 5 5 5 GLY GLY C . n C 1 6 LYS 6 6 6 LYS LYS C . n C 1 7 LYS 7 7 7 LYS LYS C . n C 1 8 VAL 8 8 8 VAL VAL C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 ALA 10 10 10 ALA ALA C . n C 1 11 ARG 11 11 11 ARG ARG C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 VAL 13 13 13 VAL VAL C . n C 1 14 GLU 14 14 14 GLU GLU C . n C 1 15 LEU 15 15 15 LEU LEU C . n C 1 16 LEU 16 16 16 LEU LEU C . n C 1 17 HIS 17 17 17 HIS HIS C . n C 1 18 ASP 18 18 18 ASP ASP C . n C 1 19 PRO 19 19 19 PRO PRO C . n C 1 20 ALA 20 20 20 ALA ALA C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 ASN 22 22 22 ASN ASN C . n C 1 23 ALA 23 23 23 ALA ALA C . n C 1 24 PRO 24 24 24 PRO PRO C . n C 1 25 VAL 25 25 25 VAL VAL C . n C 1 26 ALA 26 26 26 ALA ALA C . n C 1 27 ARG 27 27 27 ARG ARG C . n C 1 28 VAL 28 28 28 VAL VAL C . n C 1 29 ARG 29 29 29 ARG ARG C . n C 1 30 PHE 30 30 30 PHE PHE C . n C 1 31 GLU 31 31 31 GLU GLU C . n C 1 32 ASP 32 32 32 ASP ASP C . n C 1 33 GLY 33 33 33 GLY GLY C . n C 1 34 GLU 34 34 34 GLU GLU C . n C 1 35 GLU 35 35 35 GLU GLU C . n C 1 36 ARG 36 36 36 ARG ARG C . n C 1 37 LEU 37 37 37 LEU LEU C . n C 1 38 ILE 38 38 38 ILE ILE C . n C 1 39 LEU 39 39 39 LEU LEU C . n C 1 40 VAL 40 40 40 VAL VAL C . n C 1 41 PRO 41 41 41 PRO PRO C . n C 1 42 GLU 42 42 42 GLU GLU C . n C 1 43 GLY 43 43 43 GLY GLY C . n C 1 44 VAL 44 44 44 VAL VAL C . n C 1 45 LYS 45 45 45 LYS LYS C . n C 1 46 VAL 46 46 46 VAL VAL C . n C 1 47 GLY 47 47 47 GLY GLY C . n C 1 48 ASP 48 48 48 ASP ASP C . n C 1 49 VAL 49 49 49 VAL VAL C . n C 1 50 VAL 50 50 50 VAL VAL C . n C 1 51 GLU 51 51 51 GLU GLU C . n C 1 52 VAL 52 52 52 VAL VAL C . n C 1 53 LYS 53 53 53 LYS LYS C . n C 1 54 LYS 54 54 54 LYS LYS C . n C 1 55 VAL 55 55 55 VAL VAL C . n D 1 1 GLY 1 1 ? ? ? D . n D 1 2 PRO 2 2 ? ? ? D . n D 1 3 MET 3 3 ? ? ? D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 GLY 5 5 5 GLY GLY D . n D 1 6 LYS 6 6 6 LYS LYS D . n D 1 7 LYS 7 7 7 LYS LYS D . n D 1 8 VAL 8 8 8 VAL VAL D . n D 1 9 VAL 9 9 9 VAL VAL D . n D 1 10 ALA 10 10 10 ALA ALA D . n D 1 11 ARG 11 11 11 ARG ARG D . n D 1 12 VAL 12 12 12 VAL VAL D . n D 1 13 VAL 13 13 13 VAL VAL D . n D 1 14 GLU 14 14 14 GLU GLU D . n D 1 15 LEU 15 15 15 LEU LEU D . n D 1 16 LEU 16 16 16 LEU LEU D . n D 1 17 HIS 17 17 17 HIS HIS D . n D 1 18 ASP 18 18 18 ASP ASP D . n D 1 19 PRO 19 19 19 PRO PRO D . n D 1 20 ALA 20 20 20 ALA ALA D . n D 1 21 ARG 21 21 21 ARG ARG D . n D 1 22 ASN 22 22 22 ASN ASN D . n D 1 23 ALA 23 23 23 ALA ALA D . n D 1 24 PRO 24 24 24 PRO PRO D . n D 1 25 VAL 25 25 25 VAL VAL D . n D 1 26 ALA 26 26 26 ALA ALA D . n D 1 27 ARG 27 27 27 ARG ARG D . n D 1 28 VAL 28 28 28 VAL VAL D . n D 1 29 ARG 29 29 29 ARG ARG D . n D 1 30 PHE 30 30 30 PHE PHE D . n D 1 31 GLU 31 31 31 GLU GLU D . n D 1 32 ASP 32 32 32 ASP ASP D . n D 1 33 GLY 33 33 33 GLY GLY D . n D 1 34 GLU 34 34 34 GLU GLU D . n D 1 35 GLU 35 35 35 GLU GLU D . n D 1 36 ARG 36 36 36 ARG ARG D . n D 1 37 LEU 37 37 37 LEU LEU D . n D 1 38 ILE 38 38 38 ILE ILE D . n D 1 39 LEU 39 39 39 LEU LEU D . n D 1 40 VAL 40 40 40 VAL VAL D . n D 1 41 PRO 41 41 41 PRO PRO D . n D 1 42 GLU 42 42 42 GLU GLU D . n D 1 43 GLY 43 43 43 GLY GLY D . n D 1 44 VAL 44 44 44 VAL VAL D . n D 1 45 LYS 45 45 45 LYS LYS D . n D 1 46 VAL 46 46 46 VAL VAL D . n D 1 47 GLY 47 47 47 GLY GLY D . n D 1 48 ASP 48 48 48 ASP ASP D . n D 1 49 VAL 49 49 49 VAL VAL D . n D 1 50 VAL 50 50 50 VAL VAL D . n D 1 51 GLU 51 51 51 GLU GLU D . n D 1 52 VAL 52 52 52 VAL VAL D . n D 1 53 LYS 53 53 53 LYS LYS D . n D 1 54 LYS 54 54 54 LYS LYS D . n D 1 55 VAL 55 55 55 VAL VAL D . n E 1 1 GLY 1 1 ? ? ? E . n E 1 2 PRO 2 2 ? ? ? E . n E 1 3 MET 3 3 ? ? ? E . n E 1 4 PRO 4 4 ? ? ? E . n E 1 5 GLY 5 5 5 GLY GLY E . n E 1 6 LYS 6 6 6 LYS LYS E . n E 1 7 LYS 7 7 7 LYS LYS E . n E 1 8 VAL 8 8 8 VAL VAL E . n E 1 9 VAL 9 9 9 VAL VAL E . n E 1 10 ALA 10 10 10 ALA ALA E . n E 1 11 ARG 11 11 11 ARG ARG E . n E 1 12 VAL 12 12 12 VAL VAL E . n E 1 13 VAL 13 13 13 VAL VAL E . n E 1 14 GLU 14 14 14 GLU GLU E . n E 1 15 LEU 15 15 15 LEU LEU E . n E 1 16 LEU 16 16 16 LEU LEU E . n E 1 17 HIS 17 17 17 HIS HIS E . n E 1 18 ASP 18 18 18 ASP ASP E . n E 1 19 PRO 19 19 19 PRO PRO E . n E 1 20 ALA 20 20 20 ALA ALA E . n E 1 21 ARG 21 21 21 ARG ARG E . n E 1 22 ASN 22 22 22 ASN ASN E . n E 1 23 ALA 23 23 23 ALA ALA E . n E 1 24 PRO 24 24 24 PRO PRO E . n E 1 25 VAL 25 25 25 VAL VAL E . n E 1 26 ALA 26 26 26 ALA ALA E . n E 1 27 ARG 27 27 27 ARG ARG E . n E 1 28 VAL 28 28 28 VAL VAL E . n E 1 29 ARG 29 29 29 ARG ARG E . n E 1 30 PHE 30 30 30 PHE PHE E . n E 1 31 GLU 31 31 31 GLU GLU E . n E 1 32 ASP 32 32 32 ASP ASP E . n E 1 33 GLY 33 33 33 GLY GLY E . n E 1 34 GLU 34 34 34 GLU GLU E . n E 1 35 GLU 35 35 35 GLU GLU E . n E 1 36 ARG 36 36 36 ARG ARG E . n E 1 37 LEU 37 37 37 LEU LEU E . n E 1 38 ILE 38 38 38 ILE ILE E . n E 1 39 LEU 39 39 39 LEU LEU E . n E 1 40 VAL 40 40 40 VAL VAL E . n E 1 41 PRO 41 41 41 PRO PRO E . n E 1 42 GLU 42 42 42 GLU GLU E . n E 1 43 GLY 43 43 43 GLY GLY E . n E 1 44 VAL 44 44 44 VAL VAL E . n E 1 45 LYS 45 45 45 LYS LYS E . n E 1 46 VAL 46 46 46 VAL VAL E . n E 1 47 GLY 47 47 47 GLY GLY E . n E 1 48 ASP 48 48 48 ASP ASP E . n E 1 49 VAL 49 49 49 VAL VAL E . n E 1 50 VAL 50 50 50 VAL VAL E . n E 1 51 GLU 51 51 51 GLU GLU E . n E 1 52 VAL 52 52 52 VAL VAL E . n E 1 53 LYS 53 53 53 LYS LYS E . n E 1 54 LYS 54 54 54 LYS LYS E . n E 1 55 VAL 55 55 55 VAL VAL E . n F 1 1 GLY 1 1 ? ? ? F . n F 1 2 PRO 2 2 ? ? ? F . n F 1 3 MET 3 3 ? ? ? F . n F 1 4 PRO 4 4 ? ? ? F . n F 1 5 GLY 5 5 5 GLY GLY F . n F 1 6 LYS 6 6 6 LYS LYS F . n F 1 7 LYS 7 7 7 LYS LYS F . n F 1 8 VAL 8 8 8 VAL VAL F . n F 1 9 VAL 9 9 9 VAL VAL F . n F 1 10 ALA 10 10 10 ALA ALA F . n F 1 11 ARG 11 11 11 ARG ARG F . n F 1 12 VAL 12 12 12 VAL VAL F . n F 1 13 VAL 13 13 13 VAL VAL F . n F 1 14 GLU 14 14 14 GLU GLU F . n F 1 15 LEU 15 15 15 LEU LEU F . n F 1 16 LEU 16 16 16 LEU LEU F . n F 1 17 HIS 17 17 17 HIS HIS F . n F 1 18 ASP 18 18 18 ASP ASP F . n F 1 19 PRO 19 19 19 PRO PRO F . n F 1 20 ALA 20 20 20 ALA ALA F . n F 1 21 ARG 21 21 21 ARG ARG F . n F 1 22 ASN 22 22 22 ASN ASN F . n F 1 23 ALA 23 23 23 ALA ALA F . n F 1 24 PRO 24 24 24 PRO PRO F . n F 1 25 VAL 25 25 25 VAL VAL F . n F 1 26 ALA 26 26 26 ALA ALA F . n F 1 27 ARG 27 27 27 ARG ARG F . n F 1 28 VAL 28 28 28 VAL VAL F . n F 1 29 ARG 29 29 29 ARG ARG F . n F 1 30 PHE 30 30 30 PHE PHE F . n F 1 31 GLU 31 31 31 GLU GLU F . n F 1 32 ASP 32 32 32 ASP ASP F . n F 1 33 GLY 33 33 33 GLY GLY F . n F 1 34 GLU 34 34 34 GLU GLU F . n F 1 35 GLU 35 35 35 GLU GLU F . n F 1 36 ARG 36 36 36 ARG ARG F . n F 1 37 LEU 37 37 37 LEU LEU F . n F 1 38 ILE 38 38 38 ILE ILE F . n F 1 39 LEU 39 39 39 LEU LEU F . n F 1 40 VAL 40 40 40 VAL VAL F . n F 1 41 PRO 41 41 41 PRO PRO F . n F 1 42 GLU 42 42 42 GLU GLU F . n F 1 43 GLY 43 43 43 GLY GLY F . n F 1 44 VAL 44 44 44 VAL VAL F . n F 1 45 LYS 45 45 45 LYS LYS F . n F 1 46 VAL 46 46 46 VAL VAL F . n F 1 47 GLY 47 47 47 GLY GLY F . n F 1 48 ASP 48 48 48 ASP ASP F . n F 1 49 VAL 49 49 49 VAL VAL F . n F 1 50 VAL 50 50 50 VAL VAL F . n F 1 51 GLU 51 51 51 GLU GLU F . n F 1 52 VAL 52 52 52 VAL VAL F . n F 1 53 LYS 53 53 53 LYS LYS F . n F 1 54 LYS 54 54 54 LYS LYS F . n F 1 55 VAL 55 55 55 VAL VAL F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 HOH 1 101 8 HOH HOH A . G 2 HOH 2 102 18 HOH HOH A . G 2 HOH 3 103 5 HOH HOH A . G 2 HOH 4 104 15 HOH HOH A . G 2 HOH 5 105 7 HOH HOH A . G 2 HOH 6 106 22 HOH HOH A . G 2 HOH 7 107 19 HOH HOH A . G 2 HOH 8 108 16 HOH HOH A . H 2 HOH 1 101 3 HOH HOH B . H 2 HOH 2 102 13 HOH HOH B . H 2 HOH 3 103 6 HOH HOH B . H 2 HOH 4 104 9 HOH HOH B . H 2 HOH 5 105 14 HOH HOH B . H 2 HOH 6 106 10 HOH HOH B . H 2 HOH 7 107 4 HOH HOH B . H 2 HOH 8 108 17 HOH HOH B . I 2 HOH 1 101 21 HOH HOH C . I 2 HOH 2 102 2 HOH HOH C . J 2 HOH 1 101 25 HOH HOH D . K 2 HOH 1 101 32 HOH HOH E . K 2 HOH 2 102 23 HOH HOH E . K 2 HOH 3 103 1 HOH HOH E . L 2 HOH 1 101 29 HOH HOH F . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.14_3260: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 113.41 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8JVT _cell.details ? _cell.formula_units_Z ? _cell.length_a 124.137 _cell.length_a_esd ? _cell.length_b 53.887 _cell.length_b_esd ? _cell.length_c 55.654 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8JVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8JVT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.07 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20% PEG 6000, 100mM Tris pH8.0, 200mM Lithium chrolide' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-07-07 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8JVT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.1 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 35872 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 93.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.82 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 0.78 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.99 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.1 _reflns_shell.d_res_low 2.2 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 5832 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.44 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8JVT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.106 _refine.ls_d_res_low 38.684 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 35859 _refine.ls_number_reflns_R_free 3596 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.54 _refine.ls_percent_reflns_R_free 10.03 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2069 _refine.ls_R_factor_R_free 0.2484 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2021 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 31.58 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.36 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.106 _refine_hist.d_res_low 38.684 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 2420 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2397 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2424 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.267 ? 3273 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 30.540 ? 960 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.521 ? 393 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 ? 429 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.106 2.1336 . . 123 1237 90.00 . . . . 0.3421 . . . . . . . . . . . 0.3824 'X-RAY DIFFRACTION' 2.1336 2.1628 . . 158 1250 95.00 . . . . 0.3333 . . . . . . . . . . . 0.3784 'X-RAY DIFFRACTION' 2.1628 2.1937 . . 143 1246 95.00 . . . . 0.3413 . . . . . . . . . . . 0.3792 'X-RAY DIFFRACTION' 2.1937 2.2265 . . 127 1253 95.00 . . . . 0.3549 . . . . . . . . . . . 0.3577 'X-RAY DIFFRACTION' 2.2265 2.2613 . . 146 1268 95.00 . . . . 0.3272 . . . . . . . . . . . 0.3555 'X-RAY DIFFRACTION' 2.2613 2.2983 . . 142 1236 95.00 . . . . 0.3135 . . . . . . . . . . . 0.2986 'X-RAY DIFFRACTION' 2.2983 2.3380 . . 126 1311 94.00 . . . . 0.3176 . . . . . . . . . . . 0.3380 'X-RAY DIFFRACTION' 2.3380 2.3805 . . 131 1192 94.00 . . . . 0.3248 . . . . . . . . . . . 0.3419 'X-RAY DIFFRACTION' 2.3805 2.4262 . . 131 1266 91.00 . . . . 0.3221 . . . . . . . . . . . 0.3909 'X-RAY DIFFRACTION' 2.4262 2.4758 . . 148 1193 94.00 . . . . 0.3149 . . . . . . . . . . . 0.3374 'X-RAY DIFFRACTION' 2.4758 2.5296 . . 133 1303 97.00 . . . . 0.2954 . . . . . . . . . . . 0.4009 'X-RAY DIFFRACTION' 2.5296 2.5884 . . 142 1295 97.00 . . . . 0.2957 . . . . . . . . . . . 0.3161 'X-RAY DIFFRACTION' 2.5884 2.6531 . . 145 1255 97.00 . . . . 0.2907 . . . . . . . . . . . 0.3645 'X-RAY DIFFRACTION' 2.6531 2.7248 . . 138 1288 97.00 . . . . 0.3099 . . . . . . . . . . . 0.3433 'X-RAY DIFFRACTION' 2.7248 2.8050 . . 148 1321 97.00 . . . . 0.2723 . . . . . . . . . . . 0.3213 'X-RAY DIFFRACTION' 2.8050 2.8955 . . 133 1266 97.00 . . . . 0.2922 . . . . . . . . . . . 0.3397 'X-RAY DIFFRACTION' 2.8955 2.9990 . . 145 1278 96.00 . . . . 0.2870 . . . . . . . . . . . 0.3463 'X-RAY DIFFRACTION' 2.9990 3.1190 . . 147 1238 94.00 . . . . 0.2630 . . . . . . . . . . . 0.3140 'X-RAY DIFFRACTION' 3.1190 3.2609 . . 155 1202 92.00 . . . . 0.2325 . . . . . . . . . . . 0.3122 'X-RAY DIFFRACTION' 3.2609 3.4327 . . 120 1204 91.00 . . . . 0.2338 . . . . . . . . . . . 0.2831 'X-RAY DIFFRACTION' 3.4327 3.6476 . . 136 1179 88.00 . . . . 0.2135 . . . . . . . . . . . 0.2491 'X-RAY DIFFRACTION' 3.6476 3.9290 . . 139 1179 89.00 . . . . 0.1869 . . . . . . . . . . . 0.2668 'X-RAY DIFFRACTION' 3.9290 4.3239 . . 123 1180 89.00 . . . . 0.1512 . . . . . . . . . . . 0.1842 'X-RAY DIFFRACTION' 4.3239 4.9485 . . 132 1182 89.00 . . . . 0.1311 . . . . . . . . . . . 0.1723 'X-RAY DIFFRACTION' 4.9485 6.2304 . . 145 1220 92.00 . . . . 0.1517 . . . . . . . . . . . 0.2131 'X-RAY DIFFRACTION' 6.2304 38.684 . . 140 1221 92.00 . . . . 0.1417 . . . . . . . . . . . 0.1850 # _struct.entry_id 8JVT _struct.title 'Crystal structure of the chimeric protein mkaL2_v1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8JVT _struct_keywords.text 'OB fold, RIBOSOMAL PROTEIN' _struct_keywords.pdbx_keywords 'RIBOSOMAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8JVT _struct_ref.pdbx_db_accession 8JVT _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8JVT A 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 2 1 8JVT B 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 3 1 8JVT C 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 4 1 8JVT D 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 5 1 8JVT E 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 6 1 8JVT F 1 ? 55 ? 8JVT 1 ? 55 ? 1 55 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2350 ? 1 MORE -11 ? 1 'SSA (A^2)' 6100 ? 2 'ABSA (A^2)' 2510 ? 2 MORE -12 ? 2 'SSA (A^2)' 5900 ? 3 'ABSA (A^2)' 2520 ? 3 MORE -12 ? 3 'SSA (A^2)' 5950 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,G,H 2 1 C,I 2 2 E,K 3 1 D,J 3 3 F,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 4_545 -x+1/2,y-1/2,-z -1.0000000000 0.0000000000 0.0000000000 62.0685000000 0.0000000000 1.0000000000 0.0000000000 -26.9435000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 35 ? LEU A 39 ? GLU A 35 LEU A 39 AA1 2 VAL A 25 ? ARG A 29 ? VAL A 25 ARG A 29 AA1 3 VAL A 8 ? LEU A 16 ? VAL A 8 LEU A 16 AA1 4 VAL A 49 ? LYS A 54 ? VAL A 49 LYS A 54 AA1 5 VAL B 49 ? LYS B 54 ? VAL B 49 LYS B 54 AA1 6 VAL B 8 ? LEU B 16 ? VAL B 8 LEU B 16 AA1 7 VAL B 25 ? PHE B 30 ? VAL B 25 PHE B 30 AA1 8 GLU B 35 ? LEU B 39 ? GLU B 35 LEU B 39 AA2 1 GLU C 35 ? LEU C 39 ? GLU C 35 LEU C 39 AA2 2 VAL C 25 ? ARG C 29 ? VAL C 25 ARG C 29 AA2 3 VAL C 8 ? LEU C 16 ? VAL C 8 LEU C 16 AA2 4 VAL C 49 ? VAL C 52 ? VAL C 49 VAL C 52 AA3 1 GLU D 35 ? LEU D 39 ? GLU D 35 LEU D 39 AA3 2 VAL D 25 ? PHE D 30 ? VAL D 25 PHE D 30 AA3 3 VAL D 8 ? LEU D 16 ? VAL D 8 LEU D 16 AA3 4 VAL D 49 ? VAL D 52 ? VAL D 49 VAL D 52 AA4 1 GLU E 35 ? LEU E 39 ? GLU E 35 LEU E 39 AA4 2 VAL E 25 ? PHE E 30 ? VAL E 25 PHE E 30 AA4 3 VAL E 8 ? LEU E 16 ? VAL E 8 LEU E 16 AA4 4 VAL E 49 ? VAL E 52 ? VAL E 49 VAL E 52 AA5 1 GLU F 35 ? LEU F 39 ? GLU F 35 LEU F 39 AA5 2 VAL F 25 ? PHE F 30 ? VAL F 25 PHE F 30 AA5 3 VAL F 8 ? LEU F 16 ? VAL F 8 LEU F 16 AA5 4 VAL F 49 ? VAL F 52 ? VAL F 49 VAL F 52 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ARG A 36 ? O ARG A 36 N VAL A 28 ? N VAL A 28 AA1 2 3 O ARG A 27 ? O ARG A 27 N VAL A 13 ? N VAL A 13 AA1 3 4 N ALA A 10 ? N ALA A 10 O VAL A 50 ? O VAL A 50 AA1 4 5 N LYS A 53 ? N LYS A 53 O GLU B 51 ? O GLU B 51 AA1 5 6 O VAL B 50 ? O VAL B 50 N ALA B 10 ? N ALA B 10 AA1 6 7 N LEU B 16 ? N LEU B 16 O VAL B 25 ? O VAL B 25 AA1 7 8 N VAL B 28 ? N VAL B 28 O ARG B 36 ? O ARG B 36 AA2 1 2 O ARG C 36 ? O ARG C 36 N VAL C 28 ? N VAL C 28 AA2 2 3 O VAL C 25 ? O VAL C 25 N LEU C 16 ? N LEU C 16 AA2 3 4 N ALA C 10 ? N ALA C 10 O VAL C 50 ? O VAL C 50 AA3 1 2 O ILE D 38 ? O ILE D 38 N ALA D 26 ? N ALA D 26 AA3 2 3 O ARG D 27 ? O ARG D 27 N VAL D 13 ? N VAL D 13 AA3 3 4 N ALA D 10 ? N ALA D 10 O VAL D 50 ? O VAL D 50 AA4 1 2 O ILE E 38 ? O ILE E 38 N ALA E 26 ? N ALA E 26 AA4 2 3 O ARG E 27 ? O ARG E 27 N VAL E 13 ? N VAL E 13 AA4 3 4 N ALA E 10 ? N ALA E 10 O VAL E 50 ? O VAL E 50 AA5 1 2 O ILE F 38 ? O ILE F 38 N ALA F 26 ? N ALA F 26 AA5 2 3 O ARG F 27 ? O ARG F 27 N VAL F 13 ? N VAL F 13 AA5 3 4 N ALA F 10 ? N ALA F 10 O VAL F 50 ? O VAL F 50 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 C ARG 29 ? ? OE2 C GLU 35 ? ? 1.85 2 1 N E GLY 5 ? ? O E HOH 101 ? ? 2.01 3 1 NH2 C ARG 21 ? ? O C HOH 101 ? ? 2.02 4 1 OD2 C ASP 32 ? ? NH1 C ARG 36 ? ? 2.05 5 1 N B VAL 8 ? ? O B HOH 101 ? ? 2.16 6 1 NH1 C ARG 21 ? ? O C HOH 101 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 NH1 C ARG 21 ? ? 1_555 OD1 E ASP 32 ? ? 2_555 1.58 2 1 NH1 D ARG 36 ? ? 1_555 NH1 F ARG 21 ? ? 4_545 1.78 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS C 6 ? ? 81.23 -64.79 2 1 LYS D 6 ? ? -105.76 58.41 3 1 ALA F 20 ? ? -75.84 20.93 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 23.3026 2.3073 22.9040 0.5220 ? 0.0411 ? -0.1074 ? 0.4455 ? -0.0736 ? 0.7183 ? 2.4175 ? 1.0646 ? -2.7716 ? 6.3508 ? -1.8236 ? 5.8825 ? 0.0131 ? -0.2799 ? 0.1367 ? -0.3775 ? -0.0328 ? 1.0733 ? 0.2546 ? -0.0038 ? 0.1533 ? 2 'X-RAY DIFFRACTION' ? refined 18.6428 -1.3655 18.4559 0.6431 ? 0.0013 ? -0.0792 ? 0.6744 ? -0.1901 ? 0.7272 ? 2.4946 ? 1.5381 ? 0.8606 ? 3.8644 ? 3.9033 ? 4.1781 ? -0.1086 ? 1.6029 ? -1.2277 ? -0.4283 ? -0.0060 ? 0.0896 ? 0.7464 ? -0.4959 ? 0.1178 ? 3 'X-RAY DIFFRACTION' ? refined 21.9292 1.6030 25.7672 0.5035 ? 0.0610 ? -0.0761 ? 0.3275 ? -0.0265 ? 0.4798 ? 4.7560 ? 3.0283 ? -2.0860 ? 4.0310 ? 1.4856 ? 9.3927 ? 0.0185 ? -0.1049 ? -0.6600 ? 0.1711 ? -0.0179 ? -0.5254 ? 0.3777 ? 0.1537 ? 0.0968 ? 4 'X-RAY DIFFRACTION' ? refined 14.2807 10.6502 27.6698 0.5780 ? 0.0734 ? -0.0415 ? 0.3543 ? -0.0660 ? 0.5718 ? 6.8532 ? 4.6475 ? 1.0355 ? 4.2174 ? 3.5250 ? 8.2186 ? -0.3625 ? -0.7023 ? 1.3694 ? 0.0887 ? -0.1349 ? 0.3793 ? -0.6245 ? -0.0910 ? 0.7981 ? 5 'X-RAY DIFFRACTION' ? refined 3.2782 -1.4153 20.5994 0.9299 ? 0.0416 ? -0.3369 ? 0.5826 ? -0.1905 ? 0.8218 ? 9.8577 ? 2.2099 ? 8.8395 ? 2.5375 ? 3.5942 ? 9.2631 ? 1.8909 ? 1.2862 ? -1.9042 ? -1.1907 ? -0.6880 ? 1.4108 ? 2.2079 ? 0.6346 ? -0.4334 ? 6 'X-RAY DIFFRACTION' ? refined 14.8794 11.0212 21.3249 0.4702 ? -0.0073 ? -0.0438 ? 0.3863 ? -0.0258 ? 0.6404 ? 3.6179 ? 3.4789 ? -0.3668 ? 3.5443 ? -0.5073 ? 3.1578 ? -0.0213 ? 0.1487 ? 0.5859 ? -0.7189 ? -0.2936 ? 0.0042 ? -0.6003 ? 0.1634 ? 0.0481 ? 7 'X-RAY DIFFRACTION' ? refined 12.5171 4.8512 30.8060 0.5704 ? -0.0258 ? -0.0532 ? 0.3072 ? -0.0457 ? 0.5269 ? 6.2467 ? 0.9112 ? -1.0304 ? 4.9003 ? -0.2383 ? 4.8827 ? 0.3626 ? -0.9965 ? 0.2728 ? 0.1096 ? -0.0355 ? 0.1278 ? 0.1142 ? -0.3691 ? -0.3002 ? 8 'X-RAY DIFFRACTION' ? refined 12.4147 4.0827 -6.0310 0.6114 ? 0.2024 ? -0.0160 ? 1.0265 ? -0.1376 ? 0.4847 ? 4.1554 ? -1.4454 ? 3.6563 ? 8.3495 ? -4.4082 ? 4.1252 ? -0.8958 ? -0.2589 ? 0.0139 ? 0.5582 ? 0.8260 ? 0.2034 ? -0.2069 ? -0.9523 ? -0.0085 ? 9 'X-RAY DIFFRACTION' ? refined 0.9061 5.3983 -4.7729 0.8862 ? 0.1906 ? -0.0799 ? 1.7607 ? 0.1650 ? 1.1317 ? 2.1955 ? 0.1904 ? 0.6181 ? 2.0006 ? -7.2971 ? 4.8950 ? -2.8542 ? -2.4179 ? -0.1447 ? 1.1578 ? 1.6034 ? 1.2951 ? -0.6619 ? -1.4534 ? 0.2365 ? 10 'X-RAY DIFFRACTION' ? refined 13.1396 8.2459 -6.1313 0.5439 ? 0.0525 ? -0.0289 ? 0.9820 ? -0.2296 ? 0.5449 ? 9.4661 ? -6.3529 ? -0.7899 ? 9.2821 ? -2.4497 ? 5.1884 ? -1.3034 ? -2.5796 ? 0.9670 ? 1.1747 ? 1.0855 ? -0.9979 ? -0.4980 ? -0.2962 ? 0.2104 ? 11 'X-RAY DIFFRACTION' ? refined 18.7704 -13.8578 -2.2818 0.8037 ? 0.0219 ? -0.0552 ? 1.0061 ? -0.0672 ? 0.5060 ? 6.5414 ? -3.5527 ? 0.4124 ? 6.0316 ? -2.6490 ? 5.1756 ? 0.3745 ? -0.0430 ? -0.2455 ? 0.3941 ? 0.0381 ? 0.0600 ? 0.5673 ? -0.0196 ? -0.4499 ? 12 'X-RAY DIFFRACTION' ? refined 21.6189 -12.2874 -1.4143 0.7948 ? 0.0492 ? 0.1246 ? 0.8002 ? -0.0287 ? 0.4250 ? 8.1446 ? 1.3766 ? 0.7890 ? 9.6617 ? -0.5686 ? 2.4370 ? -1.0488 ? -1.5365 ? -0.2386 ? 0.8000 ? 0.5625 ? -0.1675 ? 0.7186 ? -0.1536 ? 0.3248 ? 13 'X-RAY DIFFRACTION' ? refined 21.1819 -24.6289 0.2339 1.1545 ? -0.0678 ? 0.1762 ? 0.9089 ? 0.1346 ? 0.6766 ? 8.8883 ? -1.7608 ? 2.0732 ? 2.0194 ? -0.5837 ? 2.9447 ? -0.5340 ? -1.1175 ? -1.1892 ? 1.3308 ? 0.3687 ? 0.0845 ? 1.4314 ? -0.7700 ? 0.4608 ? 14 'X-RAY DIFFRACTION' ? refined -11.0070 11.1946 17.3114 0.5038 ? 0.0927 ? 0.0036 ? 0.7346 ? 0.1285 ? 0.5594 ? 2.0615 ? 0.6080 ? 3.1643 ? 5.9997 ? 2.3621 ? 8.7340 ? -0.0180 ? -0.1103 ? 0.6389 ? -0.3707 ? 0.0412 ? -0.1810 ? -0.3481 ? -1.5433 ? -0.3310 ? 15 'X-RAY DIFFRACTION' ? refined 5.6801 10.9236 10.7879 0.6752 ? -0.0472 ? 0.0936 ? 1.1791 ? 0.0479 ? 0.8903 ? 4.6683 ? -6.9051 ? -0.3447 ? 1.9787 ? 0.7266 ? 6.2766 ? -0.1343 ? 1.6973 ? 0.2036 ? -0.8286 ? 0.2635 ? -0.7000 ? 0.7936 ? 1.9693 ? -0.1845 ? 16 'X-RAY DIFFRACTION' ? refined -9.3113 5.0558 17.3931 0.4928 ? 0.0291 ? -0.0204 ? 0.7333 ? 0.0359 ? 0.5681 ? 7.3061 ? 5.0203 ? -5.8172 ? 3.5947 ? -4.0471 ? 4.7775 ? 0.1841 ? 0.2759 ? 0.2568 ? 0.9044 ? 0.3856 ? 0.1704 ? 0.0810 ? -0.3002 ? -0.3125 ? 17 'X-RAY DIFFRACTION' ? refined -8.7779 15.7329 12.8734 0.5824 ? 0.0003 ? -0.0581 ? 0.5915 ? 0.2752 ? 0.5974 ? 3.0837 ? -1.8083 ? -1.5626 ? 6.5747 ? -1.2397 ? 6.5576 ? -0.0862 ? 0.9613 ? 1.5595 ? 0.0667 ? 0.1554 ? 0.3066 ? 0.0612 ? -0.6633 ? -0.0935 ? 18 'X-RAY DIFFRACTION' ? refined 43.0992 2.3209 9.7940 0.7939 ? 0.2037 ? 0.1312 ? 0.6611 ? -0.0227 ? 0.8687 ? 3.3493 ? 4.1052 ? 0.7867 ? 5.9949 ? -2.2522 ? 8.0028 ? -1.4161 ? -1.4312 ? -1.8990 ? -0.2916 ? 0.0587 ? -1.4359 ? 1.6353 ? 1.4936 ? 1.2401 ? 19 'X-RAY DIFFRACTION' ? refined 25.4226 6.1539 7.3064 0.9224 ? -0.0068 ? -0.1812 ? 0.9758 ? 0.2112 ? 0.9900 ? 7.8065 ? -2.1781 ? -8.3541 ? 2.1554 ? 1.7451 ? 9.0927 ? 1.6581 ? 1.3591 ? 2.0532 ? -0.5787 ? 0.0364 ? -0.8908 ? -0.0177 ? -2.6469 ? -0.8150 ? 20 'X-RAY DIFFRACTION' ? refined 39.1269 5.2156 12.6907 0.5954 ? 0.0828 ? 0.0845 ? 1.0351 ? -0.1484 ? 0.7093 ? 8.6399 ? 1.4757 ? 0.4231 ? 2.3596 ? -1.5519 ? 2.2540 ? 0.9315 ? 0.3650 ? -1.9147 ? -0.1467 ? -0.3623 ? -0.8379 ? 0.2921 ? 1.7293 ? -0.2432 ? 21 'X-RAY DIFFRACTION' ? refined 39.5402 3.4586 10.3170 0.6791 ? 0.1419 ? 0.0904 ? 0.9104 ? -0.2010 ? 0.6439 ? 4.9941 ? 0.5764 ? -3.3296 ? 9.5711 ? -4.3824 ? 7.5386 ? -0.6317 ? -0.8709 ? -0.4416 ? -0.4073 ? 0.1714 ? -1.4147 ? 1.0445 ? 1.1301 ? 0.3448 ? 22 'X-RAY DIFFRACTION' ? refined 44.6262 3.9404 -0.1468 1.0599 ? 0.2785 ? 0.2012 ? 1.3373 ? -0.0865 ? 0.7236 ? 7.3583 ? 3.0821 ? -3.3092 ? 3.9423 ? -0.2511 ? 2.0528 ? -0.3879 ? 1.3857 ? -1.1397 ? -1.4052 ? -0.1159 ? -0.7395 ? 2.2589 ? 1.6278 ? 0.8492 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 4 through 23 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 24 through 34 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 35 through 55 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 5 through 16 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 17 through 24 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 25 through 39 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 40 through 55 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 4 through 29 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 30 through 34 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 35 through 55 ) ; 11 'X-RAY DIFFRACTION' 11 ? ? ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 4 through 23 ) ; 12 'X-RAY DIFFRACTION' 12 ? ? ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 24 through 48 ) ; 13 'X-RAY DIFFRACTION' 13 ? ? ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 49 through 55 ) ; 14 'X-RAY DIFFRACTION' 14 ? ? ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 5 through 16 ) ; 15 'X-RAY DIFFRACTION' 15 ? ? ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 17 through 24 ) ; 16 'X-RAY DIFFRACTION' 16 ? ? ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 25 through 39 ) ; 17 'X-RAY DIFFRACTION' 17 ? ? ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 40 through 55 ) ; 18 'X-RAY DIFFRACTION' 18 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 5 through 16 ) ; 19 'X-RAY DIFFRACTION' 19 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 17 through 23 ) ; 20 'X-RAY DIFFRACTION' 20 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 24 through 30 ) ; 21 'X-RAY DIFFRACTION' 21 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 31 through 48 ) ; 22 'X-RAY DIFFRACTION' 22 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 49 through 55 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A MET 3 ? A MET 3 4 1 Y 1 B GLY 1 ? B GLY 1 5 1 Y 1 B PRO 2 ? B PRO 2 6 1 Y 1 B MET 3 ? B MET 3 7 1 Y 1 B PRO 4 ? B PRO 4 8 1 Y 1 C GLY 1 ? C GLY 1 9 1 Y 1 C PRO 2 ? C PRO 2 10 1 Y 1 C MET 3 ? C MET 3 11 1 Y 1 D GLY 1 ? D GLY 1 12 1 Y 1 D PRO 2 ? D PRO 2 13 1 Y 1 D MET 3 ? D MET 3 14 1 Y 1 E GLY 1 ? E GLY 1 15 1 Y 1 E PRO 2 ? E PRO 2 16 1 Y 1 E MET 3 ? E MET 3 17 1 Y 1 E PRO 4 ? E PRO 4 18 1 Y 1 F GLY 1 ? F GLY 1 19 1 Y 1 F PRO 2 ? F PRO 2 20 1 Y 1 F MET 3 ? F MET 3 21 1 Y 1 F PRO 4 ? F PRO 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLU N N N N 74 GLU CA C N S 75 GLU C C N N 76 GLU O O N N 77 GLU CB C N N 78 GLU CG C N N 79 GLU CD C N N 80 GLU OE1 O N N 81 GLU OE2 O N N 82 GLU OXT O N N 83 GLU H H N N 84 GLU H2 H N N 85 GLU HA H N N 86 GLU HB2 H N N 87 GLU HB3 H N N 88 GLU HG2 H N N 89 GLU HG3 H N N 90 GLU HE2 H N N 91 GLU HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HIS N N N N 103 HIS CA C N S 104 HIS C C N N 105 HIS O O N N 106 HIS CB C N N 107 HIS CG C Y N 108 HIS ND1 N Y N 109 HIS CD2 C Y N 110 HIS CE1 C Y N 111 HIS NE2 N Y N 112 HIS OXT O N N 113 HIS H H N N 114 HIS H2 H N N 115 HIS HA H N N 116 HIS HB2 H N N 117 HIS HB3 H N N 118 HIS HD1 H N N 119 HIS HD2 H N N 120 HIS HE1 H N N 121 HIS HE2 H N N 122 HIS HXT H N N 123 HOH O O N N 124 HOH H1 H N N 125 HOH H2 H N N 126 ILE N N N N 127 ILE CA C N S 128 ILE C C N N 129 ILE O O N N 130 ILE CB C N S 131 ILE CG1 C N N 132 ILE CG2 C N N 133 ILE CD1 C N N 134 ILE OXT O N N 135 ILE H H N N 136 ILE H2 H N N 137 ILE HA H N N 138 ILE HB H N N 139 ILE HG12 H N N 140 ILE HG13 H N N 141 ILE HG21 H N N 142 ILE HG22 H N N 143 ILE HG23 H N N 144 ILE HD11 H N N 145 ILE HD12 H N N 146 ILE HD13 H N N 147 ILE HXT H N N 148 LEU N N N N 149 LEU CA C N S 150 LEU C C N N 151 LEU O O N N 152 LEU CB C N N 153 LEU CG C N N 154 LEU CD1 C N N 155 LEU CD2 C N N 156 LEU OXT O N N 157 LEU H H N N 158 LEU H2 H N N 159 LEU HA H N N 160 LEU HB2 H N N 161 LEU HB3 H N N 162 LEU HG H N N 163 LEU HD11 H N N 164 LEU HD12 H N N 165 LEU HD13 H N N 166 LEU HD21 H N N 167 LEU HD22 H N N 168 LEU HD23 H N N 169 LEU HXT H N N 170 LYS N N N N 171 LYS CA C N S 172 LYS C C N N 173 LYS O O N N 174 LYS CB C N N 175 LYS CG C N N 176 LYS CD C N N 177 LYS CE C N N 178 LYS NZ N N N 179 LYS OXT O N N 180 LYS H H N N 181 LYS H2 H N N 182 LYS HA H N N 183 LYS HB2 H N N 184 LYS HB3 H N N 185 LYS HG2 H N N 186 LYS HG3 H N N 187 LYS HD2 H N N 188 LYS HD3 H N N 189 LYS HE2 H N N 190 LYS HE3 H N N 191 LYS HZ1 H N N 192 LYS HZ2 H N N 193 LYS HZ3 H N N 194 LYS HXT H N N 195 MET N N N N 196 MET CA C N S 197 MET C C N N 198 MET O O N N 199 MET CB C N N 200 MET CG C N N 201 MET SD S N N 202 MET CE C N N 203 MET OXT O N N 204 MET H H N N 205 MET H2 H N N 206 MET HA H N N 207 MET HB2 H N N 208 MET HB3 H N N 209 MET HG2 H N N 210 MET HG3 H N N 211 MET HE1 H N N 212 MET HE2 H N N 213 MET HE3 H N N 214 MET HXT H N N 215 PHE N N N N 216 PHE CA C N S 217 PHE C C N N 218 PHE O O N N 219 PHE CB C N N 220 PHE CG C Y N 221 PHE CD1 C Y N 222 PHE CD2 C Y N 223 PHE CE1 C Y N 224 PHE CE2 C Y N 225 PHE CZ C Y N 226 PHE OXT O N N 227 PHE H H N N 228 PHE H2 H N N 229 PHE HA H N N 230 PHE HB2 H N N 231 PHE HB3 H N N 232 PHE HD1 H N N 233 PHE HD2 H N N 234 PHE HE1 H N N 235 PHE HE2 H N N 236 PHE HZ H N N 237 PHE HXT H N N 238 PRO N N N N 239 PRO CA C N S 240 PRO C C N N 241 PRO O O N N 242 PRO CB C N N 243 PRO CG C N N 244 PRO CD C N N 245 PRO OXT O N N 246 PRO H H N N 247 PRO HA H N N 248 PRO HB2 H N N 249 PRO HB3 H N N 250 PRO HG2 H N N 251 PRO HG3 H N N 252 PRO HD2 H N N 253 PRO HD3 H N N 254 PRO HXT H N N 255 VAL N N N N 256 VAL CA C N S 257 VAL C C N N 258 VAL O O N N 259 VAL CB C N N 260 VAL CG1 C N N 261 VAL CG2 C N N 262 VAL OXT O N N 263 VAL H H N N 264 VAL H2 H N N 265 VAL HA H N N 266 VAL HB H N N 267 VAL HG11 H N N 268 VAL HG12 H N N 269 VAL HG13 H N N 270 VAL HG21 H N N 271 VAL HG22 H N N 272 VAL HG23 H N N 273 VAL HXT H N N 274 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLU N CA sing N N 70 GLU N H sing N N 71 GLU N H2 sing N N 72 GLU CA C sing N N 73 GLU CA CB sing N N 74 GLU CA HA sing N N 75 GLU C O doub N N 76 GLU C OXT sing N N 77 GLU CB CG sing N N 78 GLU CB HB2 sing N N 79 GLU CB HB3 sing N N 80 GLU CG CD sing N N 81 GLU CG HG2 sing N N 82 GLU CG HG3 sing N N 83 GLU CD OE1 doub N N 84 GLU CD OE2 sing N N 85 GLU OE2 HE2 sing N N 86 GLU OXT HXT sing N N 87 GLY N CA sing N N 88 GLY N H sing N N 89 GLY N H2 sing N N 90 GLY CA C sing N N 91 GLY CA HA2 sing N N 92 GLY CA HA3 sing N N 93 GLY C O doub N N 94 GLY C OXT sing N N 95 GLY OXT HXT sing N N 96 HIS N CA sing N N 97 HIS N H sing N N 98 HIS N H2 sing N N 99 HIS CA C sing N N 100 HIS CA CB sing N N 101 HIS CA HA sing N N 102 HIS C O doub N N 103 HIS C OXT sing N N 104 HIS CB CG sing N N 105 HIS CB HB2 sing N N 106 HIS CB HB3 sing N N 107 HIS CG ND1 sing Y N 108 HIS CG CD2 doub Y N 109 HIS ND1 CE1 doub Y N 110 HIS ND1 HD1 sing N N 111 HIS CD2 NE2 sing Y N 112 HIS CD2 HD2 sing N N 113 HIS CE1 NE2 sing Y N 114 HIS CE1 HE1 sing N N 115 HIS NE2 HE2 sing N N 116 HIS OXT HXT sing N N 117 HOH O H1 sing N N 118 HOH O H2 sing N N 119 ILE N CA sing N N 120 ILE N H sing N N 121 ILE N H2 sing N N 122 ILE CA C sing N N 123 ILE CA CB sing N N 124 ILE CA HA sing N N 125 ILE C O doub N N 126 ILE C OXT sing N N 127 ILE CB CG1 sing N N 128 ILE CB CG2 sing N N 129 ILE CB HB sing N N 130 ILE CG1 CD1 sing N N 131 ILE CG1 HG12 sing N N 132 ILE CG1 HG13 sing N N 133 ILE CG2 HG21 sing N N 134 ILE CG2 HG22 sing N N 135 ILE CG2 HG23 sing N N 136 ILE CD1 HD11 sing N N 137 ILE CD1 HD12 sing N N 138 ILE CD1 HD13 sing N N 139 ILE OXT HXT sing N N 140 LEU N CA sing N N 141 LEU N H sing N N 142 LEU N H2 sing N N 143 LEU CA C sing N N 144 LEU CA CB sing N N 145 LEU CA HA sing N N 146 LEU C O doub N N 147 LEU C OXT sing N N 148 LEU CB CG sing N N 149 LEU CB HB2 sing N N 150 LEU CB HB3 sing N N 151 LEU CG CD1 sing N N 152 LEU CG CD2 sing N N 153 LEU CG HG sing N N 154 LEU CD1 HD11 sing N N 155 LEU CD1 HD12 sing N N 156 LEU CD1 HD13 sing N N 157 LEU CD2 HD21 sing N N 158 LEU CD2 HD22 sing N N 159 LEU CD2 HD23 sing N N 160 LEU OXT HXT sing N N 161 LYS N CA sing N N 162 LYS N H sing N N 163 LYS N H2 sing N N 164 LYS CA C sing N N 165 LYS CA CB sing N N 166 LYS CA HA sing N N 167 LYS C O doub N N 168 LYS C OXT sing N N 169 LYS CB CG sing N N 170 LYS CB HB2 sing N N 171 LYS CB HB3 sing N N 172 LYS CG CD sing N N 173 LYS CG HG2 sing N N 174 LYS CG HG3 sing N N 175 LYS CD CE sing N N 176 LYS CD HD2 sing N N 177 LYS CD HD3 sing N N 178 LYS CE NZ sing N N 179 LYS CE HE2 sing N N 180 LYS CE HE3 sing N N 181 LYS NZ HZ1 sing N N 182 LYS NZ HZ2 sing N N 183 LYS NZ HZ3 sing N N 184 LYS OXT HXT sing N N 185 MET N CA sing N N 186 MET N H sing N N 187 MET N H2 sing N N 188 MET CA C sing N N 189 MET CA CB sing N N 190 MET CA HA sing N N 191 MET C O doub N N 192 MET C OXT sing N N 193 MET CB CG sing N N 194 MET CB HB2 sing N N 195 MET CB HB3 sing N N 196 MET CG SD sing N N 197 MET CG HG2 sing N N 198 MET CG HG3 sing N N 199 MET SD CE sing N N 200 MET CE HE1 sing N N 201 MET CE HE2 sing N N 202 MET CE HE3 sing N N 203 MET OXT HXT sing N N 204 PHE N CA sing N N 205 PHE N H sing N N 206 PHE N H2 sing N N 207 PHE CA C sing N N 208 PHE CA CB sing N N 209 PHE CA HA sing N N 210 PHE C O doub N N 211 PHE C OXT sing N N 212 PHE CB CG sing N N 213 PHE CB HB2 sing N N 214 PHE CB HB3 sing N N 215 PHE CG CD1 doub Y N 216 PHE CG CD2 sing Y N 217 PHE CD1 CE1 sing Y N 218 PHE CD1 HD1 sing N N 219 PHE CD2 CE2 doub Y N 220 PHE CD2 HD2 sing N N 221 PHE CE1 CZ doub Y N 222 PHE CE1 HE1 sing N N 223 PHE CE2 CZ sing Y N 224 PHE CE2 HE2 sing N N 225 PHE CZ HZ sing N N 226 PHE OXT HXT sing N N 227 PRO N CA sing N N 228 PRO N CD sing N N 229 PRO N H sing N N 230 PRO CA C sing N N 231 PRO CA CB sing N N 232 PRO CA HA sing N N 233 PRO C O doub N N 234 PRO C OXT sing N N 235 PRO CB CG sing N N 236 PRO CB HB2 sing N N 237 PRO CB HB3 sing N N 238 PRO CG CD sing N N 239 PRO CG HG2 sing N N 240 PRO CG HG3 sing N N 241 PRO CD HD2 sing N N 242 PRO CD HD3 sing N N 243 PRO OXT HXT sing N N 244 VAL N CA sing N N 245 VAL N H sing N N 246 VAL N H2 sing N N 247 VAL CA C sing N N 248 VAL CA CB sing N N 249 VAL CA HA sing N N 250 VAL C O doub N N 251 VAL C OXT sing N N 252 VAL CB CG1 sing N N 253 VAL CB CG2 sing N N 254 VAL CB HB sing N N 255 VAL CG1 HG11 sing N N 256 VAL CG1 HG12 sing N N 257 VAL CG1 HG13 sing N N 258 VAL CG2 HG21 sing N N 259 VAL CG2 HG22 sing N N 260 VAL CG2 HG23 sing N N 261 VAL OXT HXT sing N N 262 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 18H01328 1 'Japan Society for the Promotion of Science (JSPS)' Japan 20K15854 2 'Japan Society for the Promotion of Science (JSPS)' Japan 22H01346 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8JVT _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008056 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003487 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018557 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019579 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O # loop_