HEADER LIGASE 03-JUL-23 8JYD TITLE A GENETICALLY ENCODED SENSOR BASED ON A BACTERIAL DNA LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYDEOXYRIBONUCLEOTIDE SYNTHASE [NAD(+)]; COMPND 5 EC: 6.5.1.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROCOCCUS FAECALIS (STRAIN ATCC 700802 / SOURCE 3 V583); SOURCE 4 ORGANISM_TAXID: 226185; SOURCE 5 GENE: LIGA, EF_0722; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DNA LIGASE, COMPLEX, MUTANT, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR L.CHEN REVDAT 1 10-JUL-24 8JYD 0 JRNL AUTH L.CHEN JRNL TITL A GENETICALLY ENCODED SENSOR JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 7245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 384 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 533 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3240 REMARK 3 BIN FREE R VALUE SET COUNT : 37 REMARK 3 BIN FREE R VALUE : 0.4280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2506 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 6 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.84000 REMARK 3 B22 (A**2) : 2.84000 REMARK 3 B33 (A**2) : -9.21000 REMARK 3 B12 (A**2) : 1.42000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.463 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.392 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.496 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2581 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2324 ; 0.023 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3498 ; 1.184 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5434 ; 0.521 ; 1.558 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 311 ; 6.996 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 20 ; 9.548 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 446 ;13.618 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 382 ; 0.047 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2956 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 508 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1247 ; 2.279 ; 8.514 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1247 ; 2.274 ; 8.514 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1557 ; 3.363 ;12.764 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1558 ; 3.362 ;12.764 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1334 ; 2.130 ; 8.653 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1335 ; 2.129 ; 8.653 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1942 ; 3.137 ;12.922 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2813 ; 4.149 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2814 ; 4.149 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8JYD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 11-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300039071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-23 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7642 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 19.20 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 25.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.63200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.0; 20% PEG MONO 2000, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 24.76333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.52667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.52667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.76333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CG ASP A 97 CD1 ILE A 259 2.11 REMARK 500 OD1 ASP A 97 CD1 ILE A 259 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 26 -65.64 -94.07 REMARK 500 SER A 83 -153.51 -89.77 REMARK 500 ARG A 185 45.64 -103.42 REMARK 500 GLU A 186 -50.89 -136.73 REMARK 500 ARG A 205 49.38 -102.71 REMARK 500 ALA A 225 -61.29 -102.15 REMARK 500 THR A 299 -168.10 -78.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 132 0.16 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8JYD A 1 312 UNP Q837V6 DNLJ_ENTFA 6 317 SEQADV 8JYD ASP A 21 UNP Q837V6 SER 26 CONFLICT SEQADV 8JYD ASN A 63 UNP Q837V6 ARG 68 CONFLICT SEQADV 8JYD MET A 84 UNP Q837V6 LEU 89 CONFLICT SEQADV 8JYD ARG A 86 UNP Q837V6 ASP 91 CONFLICT SEQADV 8JYD LEU A 115 UNP Q837V6 LYS 120 CONFLICT SEQADV 8JYD ASP A 120 UNP Q837V6 ALA 125 CONFLICT SEQADV 8JYD ASP A 158 UNP Q837V6 ARG 163 CONFLICT SEQADV 8JYD LYS A 222 UNP Q837V6 TYR 227 CONFLICT SEQADV 8JYD GLN A 223 UNP Q837V6 THR 228 CONFLICT SEQADV 8JYD ASN A 281 UNP Q837V6 ASP 286 CONFLICT SEQRES 1 A 312 LEU THR LEU THR ALA ALA THR THR ARG ALA GLN GLU LEU SEQRES 2 A 312 ARG LYS GLN LEU ASN GLN TYR ASP HIS GLU TYR TYR VAL SEQRES 3 A 312 LYS ASP GLN PRO SER VAL GLU ASP TYR VAL TYR ASP ARG SEQRES 4 A 312 LEU TYR LYS GLU LEU VAL ASP ILE GLU THR GLU PHE PRO SEQRES 5 A 312 ASP LEU ILE THR PRO ASP SER PRO THR GLN ASN VAL GLY SEQRES 6 A 312 GLY LYS VAL LEU SER GLY PHE GLU LYS ALA PRO HIS ASP SEQRES 7 A 312 ILE PRO MET TYR SER MET ASN ARG GLY PHE SER LYS GLU SEQRES 8 A 312 ASP ILE PHE ALA PHE ASP GLU ARG VAL ARG LYS ALA ILE SEQRES 9 A 312 GLY LYS PRO VAL ALA TYR CYS CYS GLU LEU LEU ILE ASP SEQRES 10 A 312 GLY LEU ASP ILE SER LEU ARG TYR GLU ASN GLY VAL PHE SEQRES 11 A 312 VAL ARG GLY ALA THR ARG GLY ASP GLY THR VAL GLY GLU SEQRES 12 A 312 ASN ILE THR GLU ASN LEU ARG THR VAL ARG SER VAL PRO SEQRES 13 A 312 MET ASP LEU THR GLU PRO ILE SER VAL GLU VAL ARG GLY SEQRES 14 A 312 GLU CYS TYR MET PRO LYS GLN SER PHE VAL ALA LEU ASN SEQRES 15 A 312 GLU GLU ARG GLU GLU ASN GLY GLN ASP ILE PHE ALA ASN SEQRES 16 A 312 PRO ARG ASN ALA ALA ALA GLY SER LEU ARG GLN LEU ASP SEQRES 17 A 312 THR LYS ILE VAL ALA LYS ARG ASN LEU ASN THR PHE LEU SEQRES 18 A 312 LYS GLN VAL ALA ASP PHE GLY PRO MET LYS ALA LYS THR SEQRES 19 A 312 GLN PHE GLU ALA LEU GLU GLU LEU SER ALA ILE GLY PHE SEQRES 20 A 312 ARG THR ASN PRO GLU ARG GLN LEU CYS GLN SER ILE ASP SEQRES 21 A 312 GLU VAL TRP ALA TYR ILE GLU GLU TYR HIS GLU LYS ARG SEQRES 22 A 312 SER THR LEU PRO TYR GLU ILE ASN GLY ILE VAL ILE LYS SEQRES 23 A 312 VAL ASN GLU PHE ALA LEU GLN ASP GLU LEU GLY PHE THR SEQRES 24 A 312 VAL LYS ALA PRO ARG TRP ALA ILE ALA TYR LYS PHE PRO HET NMN A 401 22 HETNAM NMN BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE HETSYN NMN NICOTINAMIDE MONONUCLEOTIDE FORMUL 2 NMN C11 H16 N2 O8 P 1+ FORMUL 3 HOH *6(H2 O) HELIX 1 AA1 THR A 2 VAL A 26 1 25 HELIX 2 AA2 GLU A 33 PHE A 51 1 19 HELIX 3 AA3 PRO A 52 ILE A 55 5 4 HELIX 4 AA4 SER A 89 GLY A 105 1 17 HELIX 5 AA5 ILE A 145 ARG A 150 1 6 HELIX 6 AA6 PRO A 174 ASN A 188 1 15 HELIX 7 AA7 ASN A 195 ARG A 205 1 11 HELIX 8 AA8 ASP A 208 ALA A 213 1 6 HELIX 9 AA9 THR A 234 ILE A 245 1 12 HELIX 10 AB1 SER A 258 ARG A 273 1 16 HELIX 11 AB2 GLU A 289 GLY A 297 1 9 SHEET 1 AA1 2 LYS A 74 PRO A 76 0 SHEET 2 AA1 2 VAL A 141 GLU A 143 -1 O GLY A 142 N ALA A 75 SHEET 1 AA2 5 ASN A 85 GLY A 87 0 SHEET 2 AA2 5 ALA A 306 LYS A 310 1 O ALA A 308 N ASN A 85 SHEET 3 AA2 5 ILE A 280 VAL A 287 -1 N ILE A 285 O ILE A 307 SHEET 4 AA2 5 TYR A 110 ILE A 116 -1 N LEU A 115 O GLY A 282 SHEET 5 AA2 5 GLN A 254 CYS A 256 -1 O CYS A 256 N TYR A 110 SHEET 1 AA3 4 VAL A 129 ALA A 134 0 SHEET 2 AA3 4 LEU A 119 GLU A 126 -1 N ARG A 124 O VAL A 131 SHEET 3 AA3 4 VAL A 165 TYR A 172 -1 O VAL A 167 N LEU A 123 SHEET 4 AA3 4 ASN A 218 ASP A 226 -1 O GLN A 223 N ARG A 168 CRYST1 92.480 92.480 74.290 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010813 0.006243 0.000000 0.00000 SCALE2 0.000000 0.012486 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013461 0.00000