HEADER IMMUNE SYSTEM 03-JUL-23 8JYR TITLE CRYSTAL STRUCTURE OF ANTI-HER2 ANTIBODY H2MAB-119 IN COMPLEX WITH HER2 TITLE 2 DOMAIN I COMPND MOL_ID: 1; COMPND 2 MOLECULE: RECEPTOR TYROSINE-PROTEIN KINASE ERBB-2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: DOMAIN I; COMPND 5 SYNONYM: METASTATIC LYMPH NODE GENE 19 PROTEIN,MLN 19,PROTO-ONCOGENE COMPND 6 NEU,PROTO-ONCOGENE C-ERBB-2,TYROSINE KINASE-TYPE CELL SURFACE COMPND 7 RECEPTOR HER2,P185ERBB2; COMPND 8 EC: 2.7.10.1; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: H2MAB-119 VH-CH1; COMPND 12 CHAIN: H; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 3; COMPND 15 MOLECULE: H2MAB-119 LIGHT CHAIN; COMPND 16 CHAIN: L; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERBB2, HER2, MLN19, NEU, NGL; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 10029 KEYWDS HER2, ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR T.ARIMORI,J.TAKAGI REVDAT 3 15-MAY-24 8JYR 1 JRNL REVDAT 2 27-MAR-24 8JYR 1 JRNL REVDAT 1 13-MAR-24 8JYR 0 JRNL AUTH T.ARIMORI,E.MIHARA,H.SUZUKI,T.OHISHI,T.TANAKA,M.K.KANEKO, JRNL AUTH 2 J.TAKAGI,Y.KATO JRNL TITL LOCALLY MISFOLDED HER2 EXPRESSED ON CANCER CELLS IS A JRNL TITL 2 PROMISING TARGET FOR DEVELOPMENT OF CANCER-SPECIFIC JRNL TITL 3 ANTIBODIES. JRNL REF STRUCTURE V. 32 536 2024 JRNL REFN ISSN 0969-2126 JRNL PMID 38460519 JRNL DOI 10.1016/J.STR.2024.02.007 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.02 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 79290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.0200 - 5.1400 0.99 2740 144 0.1474 0.1801 REMARK 3 2 5.1400 - 4.0800 0.99 2702 142 0.1169 0.1241 REMARK 3 3 4.0800 - 3.5600 0.99 2694 142 0.1413 0.1663 REMARK 3 4 3.5600 - 3.2400 0.99 2700 142 0.1679 0.2139 REMARK 3 5 3.2400 - 3.0100 0.99 2676 141 0.1838 0.2212 REMARK 3 6 3.0100 - 2.8300 0.99 2699 142 0.1902 0.2247 REMARK 3 7 2.8300 - 2.6900 0.99 2715 143 0.1837 0.2094 REMARK 3 8 2.6900 - 2.5700 0.99 2704 142 0.1841 0.2401 REMARK 3 9 2.5700 - 2.4700 0.99 2693 142 0.1821 0.2295 REMARK 3 10 2.4700 - 2.3900 0.99 2698 142 0.1783 0.2381 REMARK 3 11 2.3900 - 2.3100 0.99 2689 141 0.1733 0.2009 REMARK 3 12 2.3100 - 2.2500 0.99 2668 141 0.1663 0.2198 REMARK 3 13 2.2500 - 2.1900 0.99 2695 142 0.1777 0.2266 REMARK 3 14 2.1900 - 2.1300 0.99 2699 142 0.1761 0.2300 REMARK 3 15 2.1300 - 2.0800 1.00 2682 141 0.1769 0.2349 REMARK 3 16 2.0800 - 2.0400 0.99 2702 142 0.1889 0.2393 REMARK 3 17 2.0400 - 2.0000 1.00 2682 141 0.1878 0.2270 REMARK 3 18 2.0000 - 1.9600 1.00 2709 143 0.1963 0.2643 REMARK 3 19 1.9600 - 1.9300 1.00 2696 142 0.1918 0.2122 REMARK 3 20 1.9300 - 1.8900 1.00 2700 142 0.2169 0.2684 REMARK 3 21 1.8900 - 1.8600 1.00 2695 142 0.2417 0.2832 REMARK 3 22 1.8600 - 1.8300 1.00 2707 143 0.2614 0.3294 REMARK 3 23 1.8300 - 1.8100 1.00 2720 143 0.2831 0.3557 REMARK 3 24 1.8100 - 1.7800 1.00 2679 141 0.2799 0.3180 REMARK 3 25 1.7800 - 1.7600 1.00 2722 143 0.2963 0.3497 REMARK 3 26 1.7600 - 1.7400 1.00 2668 141 0.3106 0.3226 REMARK 3 27 1.7400 - 1.7100 1.00 2734 144 0.3345 0.3544 REMARK 3 28 1.7100 - 1.6900 0.91 2457 129 0.3568 0.3673 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.202 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.507 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 4861 REMARK 3 ANGLE : 1.324 6608 REMARK 3 CHIRALITY : 0.091 747 REMARK 3 PLANARITY : 0.011 851 REMARK 3 DIHEDRAL : 6.378 664 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 21 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8333 39.5714 -18.4258 REMARK 3 T TENSOR REMARK 3 T11: 0.2364 T22: 0.2663 REMARK 3 T33: 0.3700 T12: -0.0397 REMARK 3 T13: 0.0262 T23: -0.0941 REMARK 3 L TENSOR REMARK 3 L11: 3.4685 L22: 5.7666 REMARK 3 L33: 1.2147 L12: 2.2946 REMARK 3 L13: -0.4058 L23: -1.0226 REMARK 3 S TENSOR REMARK 3 S11: -0.1155 S12: 0.2708 S13: -0.4061 REMARK 3 S21: -0.0386 S22: 0.1709 S23: -0.6948 REMARK 3 S31: -0.3431 S32: 0.3629 S33: -0.1491 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7590 33.3108 -16.4439 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.2184 REMARK 3 T33: 0.2197 T12: -0.0096 REMARK 3 T13: 0.0090 T23: -0.0248 REMARK 3 L TENSOR REMARK 3 L11: 2.8535 L22: 5.5107 REMARK 3 L33: 2.1237 L12: 0.0274 REMARK 3 L13: 0.4179 L23: 0.6083 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: 0.0488 S13: -0.1315 REMARK 3 S21: 0.1056 S22: 0.1494 S23: -0.3565 REMARK 3 S31: -0.1267 S32: 0.1210 S33: -0.1213 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 57 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1036 31.5701 -24.6148 REMARK 3 T TENSOR REMARK 3 T11: 0.2449 T22: 0.2179 REMARK 3 T33: 0.1876 T12: -0.0688 REMARK 3 T13: 0.0433 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 5.4074 L22: 8.0075 REMARK 3 L33: 5.0427 L12: -0.8975 REMARK 3 L13: -0.1025 L23: 0.7518 REMARK 3 S TENSOR REMARK 3 S11: -0.2900 S12: 0.4443 S13: -0.3691 REMARK 3 S21: -0.3741 S22: 0.3159 S23: -0.2234 REMARK 3 S31: -0.1413 S32: 0.0203 S33: -0.0228 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 76 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6422 39.9461 -18.6260 REMARK 3 T TENSOR REMARK 3 T11: 0.2501 T22: 0.2119 REMARK 3 T33: 0.1954 T12: -0.0300 REMARK 3 T13: 0.0094 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 3.0641 L22: 2.7996 REMARK 3 L33: 0.3679 L12: 1.8946 REMARK 3 L13: -0.2293 L23: 0.3074 REMARK 3 S TENSOR REMARK 3 S11: -0.1658 S12: 0.2451 S13: -0.0972 REMARK 3 S21: -0.3917 S22: 0.2285 S23: -0.2640 REMARK 3 S31: -0.0362 S32: 0.1208 S33: -0.0729 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 120 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1304 67.1120 -6.4539 REMARK 3 T TENSOR REMARK 3 T11: 0.1946 T22: 0.3496 REMARK 3 T33: 0.3151 T12: 0.0556 REMARK 3 T13: -0.0426 T23: -0.0382 REMARK 3 L TENSOR REMARK 3 L11: 3.4424 L22: 7.6026 REMARK 3 L33: 9.2309 L12: 1.1632 REMARK 3 L13: 0.0313 L23: 5.0353 REMARK 3 S TENSOR REMARK 3 S11: -0.1185 S12: -0.5644 S13: 0.1990 REMARK 3 S21: 0.0095 S22: 0.1420 S23: -0.4011 REMARK 3 S31: -0.3731 S32: 0.3386 S33: 0.0731 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 146 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2843 56.3272 -7.1903 REMARK 3 T TENSOR REMARK 3 T11: 0.2912 T22: 0.2849 REMARK 3 T33: 0.3026 T12: 0.0247 REMARK 3 T13: 0.0420 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 5.1753 L22: 4.1319 REMARK 3 L33: 2.9022 L12: 0.2618 REMARK 3 L13: 0.2988 L23: 1.2475 REMARK 3 S TENSOR REMARK 3 S11: -0.2447 S12: -0.5303 S13: -0.3628 REMARK 3 S21: 0.2957 S22: 0.1589 S23: -0.2507 REMARK 3 S31: 0.3945 S32: -0.0419 S33: 0.1007 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 169 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2896 61.9934 -13.7646 REMARK 3 T TENSOR REMARK 3 T11: 0.1872 T22: 0.2074 REMARK 3 T33: 0.2419 T12: 0.0142 REMARK 3 T13: 0.0036 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 5.9796 L22: 6.1474 REMARK 3 L33: 1.6314 L12: 1.5167 REMARK 3 L13: 0.6022 L23: 3.1403 REMARK 3 S TENSOR REMARK 3 S11: -0.3275 S12: 0.0256 S13: 0.0077 REMARK 3 S21: -0.7122 S22: 0.1941 S23: -0.0818 REMARK 3 S31: -0.7361 S32: -0.5636 S33: 0.1746 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 185 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8258 61.2943 -5.1920 REMARK 3 T TENSOR REMARK 3 T11: 0.2675 T22: 0.4056 REMARK 3 T33: 0.4549 T12: 0.0563 REMARK 3 T13: -0.0394 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 4.6235 L22: 5.3498 REMARK 3 L33: 6.9506 L12: 1.4772 REMARK 3 L13: 0.8451 L23: 3.7740 REMARK 3 S TENSOR REMARK 3 S11: -0.1864 S12: -0.5894 S13: 0.0454 REMARK 3 S21: 0.2555 S22: 0.1273 S23: -0.3770 REMARK 3 S31: 0.1532 S32: 0.5135 S33: 0.3766 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6524 52.4345 -6.2440 REMARK 3 T TENSOR REMARK 3 T11: 0.2742 T22: 0.1895 REMARK 3 T33: 0.2923 T12: 0.0234 REMARK 3 T13: -0.0046 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 5.0887 L22: 7.1659 REMARK 3 L33: 4.9330 L12: 4.6916 REMARK 3 L13: 5.0102 L23: 5.5893 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: -0.0449 S13: 0.2091 REMARK 3 S21: -0.1693 S22: -0.0976 S23: 0.4388 REMARK 3 S31: -0.2569 S32: -0.2039 S33: 0.1198 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0163 40.5032 -7.9533 REMARK 3 T TENSOR REMARK 3 T11: 0.2093 T22: 0.1727 REMARK 3 T33: 0.2049 T12: 0.0137 REMARK 3 T13: 0.0051 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 2.7118 L22: 3.2882 REMARK 3 L33: 3.1163 L12: 0.8290 REMARK 3 L13: -0.0442 L23: 0.8284 REMARK 3 S TENSOR REMARK 3 S11: 0.0756 S12: -0.1245 S13: 0.1159 REMARK 3 S21: 0.0725 S22: -0.0850 S23: 0.1235 REMARK 3 S31: -0.0016 S32: -0.0564 S33: 0.0097 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 49 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1738 42.0714 -0.3795 REMARK 3 T TENSOR REMARK 3 T11: 0.2422 T22: 0.1954 REMARK 3 T33: 0.2318 T12: -0.0207 REMARK 3 T13: 0.0436 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.5077 L22: 4.6425 REMARK 3 L33: 4.5758 L12: 0.6747 REMARK 3 L13: 0.3965 L23: 1.4321 REMARK 3 S TENSOR REMARK 3 S11: 0.0575 S12: -0.1928 S13: -0.0329 REMARK 3 S21: 0.3297 S22: -0.0301 S23: 0.1377 REMARK 3 S31: 0.0456 S32: -0.2049 S33: 0.0529 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 76 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5677 50.7479 -5.7528 REMARK 3 T TENSOR REMARK 3 T11: 0.2343 T22: 0.2634 REMARK 3 T33: 0.2672 T12: 0.0151 REMARK 3 T13: -0.0095 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5184 L22: 3.6026 REMARK 3 L33: 1.0847 L12: 1.2613 REMARK 3 L13: 0.4649 L23: 1.8679 REMARK 3 S TENSOR REMARK 3 S11: -0.0556 S12: -0.0354 S13: 0.0345 REMARK 3 S21: -0.1370 S22: 0.0035 S23: 0.1409 REMARK 3 S31: -0.0471 S32: -0.0018 S33: 0.0333 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 114 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.7604 73.8965 -10.9329 REMARK 3 T TENSOR REMARK 3 T11: 0.2394 T22: 0.2434 REMARK 3 T33: 0.2946 T12: -0.0076 REMARK 3 T13: 0.0007 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 6.5891 L22: 0.8839 REMARK 3 L33: 4.1346 L12: 0.8191 REMARK 3 L13: -4.3168 L23: -0.6732 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: 0.1567 S13: 0.4074 REMARK 3 S21: -0.1124 S22: 0.2057 S23: -0.0333 REMARK 3 S31: -0.1121 S32: -0.0893 S33: -0.2288 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 156 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1043 64.7686 -7.7181 REMARK 3 T TENSOR REMARK 3 T11: 0.2268 T22: 0.3043 REMARK 3 T33: 0.2521 T12: -0.0153 REMARK 3 T13: -0.0358 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 7.6831 L22: 5.9862 REMARK 3 L33: 4.2110 L12: 4.9025 REMARK 3 L13: -5.6728 L23: -3.2376 REMARK 3 S TENSOR REMARK 3 S11: -0.4143 S12: 0.4496 S13: 0.0914 REMARK 3 S21: -0.3886 S22: 0.3988 S23: 0.0612 REMARK 3 S31: 0.3468 S32: -0.4185 S33: 0.0248 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 175 THROUGH 211 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5625 79.0949 -11.8630 REMARK 3 T TENSOR REMARK 3 T11: 0.3490 T22: 0.2765 REMARK 3 T33: 0.4361 T12: -0.0011 REMARK 3 T13: 0.1017 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 4.5261 L22: 2.9611 REMARK 3 L33: 1.8960 L12: 0.6937 REMARK 3 L13: -2.1943 L23: -0.2701 REMARK 3 S TENSOR REMARK 3 S11: 0.2929 S12: 0.2678 S13: 0.7653 REMARK 3 S21: -0.4312 S22: 0.1524 S23: -0.2835 REMARK 3 S31: -0.4002 S32: -0.0019 S33: -0.4193 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9588 2.7649 -18.5021 REMARK 3 T TENSOR REMARK 3 T11: 0.3143 T22: 0.2555 REMARK 3 T33: 0.2284 T12: -0.0596 REMARK 3 T13: -0.0371 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 2.8957 L22: 3.0748 REMARK 3 L33: 2.7454 L12: 0.0222 REMARK 3 L13: -0.3021 L23: -0.1820 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0705 S13: -0.2744 REMARK 3 S21: -0.0437 S22: -0.0010 S23: 0.1511 REMARK 3 S31: 0.4681 S32: -0.2512 S33: -0.0041 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0317 14.0158 -20.5535 REMARK 3 T TENSOR REMARK 3 T11: 0.2012 T22: 0.1789 REMARK 3 T33: 0.1549 T12: -0.0224 REMARK 3 T13: 0.0040 T23: 0.0540 REMARK 3 L TENSOR REMARK 3 L11: 6.6302 L22: 7.0683 REMARK 3 L33: 5.7030 L12: 1.1526 REMARK 3 L13: 0.1690 L23: 1.8043 REMARK 3 S TENSOR REMARK 3 S11: 0.0329 S12: 0.0808 S13: 0.0242 REMARK 3 S21: 0.0454 S22: 0.0502 S23: 0.1433 REMARK 3 S31: 0.2304 S32: -0.2536 S33: -0.0116 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 118 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9920 3.4663 -32.1206 REMARK 3 T TENSOR REMARK 3 T11: 0.5770 T22: 0.3489 REMARK 3 T33: 0.4135 T12: -0.0313 REMARK 3 T13: 0.1087 T23: -0.0466 REMARK 3 L TENSOR REMARK 3 L11: 6.3251 L22: 2.6242 REMARK 3 L33: 2.9863 L12: 4.0580 REMARK 3 L13: 4.2856 L23: 2.6810 REMARK 3 S TENSOR REMARK 3 S11: -0.2410 S12: 0.4889 S13: -0.2886 REMARK 3 S21: -0.5258 S22: 0.0565 S23: -0.3013 REMARK 3 S31: 0.9678 S32: 0.6308 S33: -0.0628 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 139 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7919 19.1901 -27.3554 REMARK 3 T TENSOR REMARK 3 T11: 0.2357 T22: 0.2440 REMARK 3 T33: 0.2257 T12: -0.0297 REMARK 3 T13: -0.0310 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.9724 L22: 2.7030 REMARK 3 L33: 2.7101 L12: -0.7612 REMARK 3 L13: -1.3166 L23: 1.5761 REMARK 3 S TENSOR REMARK 3 S11: -0.0212 S12: 0.1626 S13: -0.0304 REMARK 3 S21: -0.3302 S22: 0.0545 S23: 0.0558 REMARK 3 S31: -0.0977 S32: -0.0990 S33: -0.0384 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 199 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7816 13.7349 -41.1955 REMARK 3 T TENSOR REMARK 3 T11: 0.4446 T22: 0.4541 REMARK 3 T33: 0.2747 T12: 0.0022 REMARK 3 T13: -0.0236 T23: -0.0581 REMARK 3 L TENSOR REMARK 3 L11: 3.4927 L22: 3.1345 REMARK 3 L33: 2.8337 L12: -3.2268 REMARK 3 L13: 2.8449 L23: -2.4280 REMARK 3 S TENSOR REMARK 3 S11: 0.3506 S12: 0.6406 S13: -0.5164 REMARK 3 S21: -0.6396 S22: -0.1106 S23: 0.3067 REMARK 3 S31: 0.0511 S32: -0.2789 S33: -0.1119 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 200 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0946 17.2195 -38.4638 REMARK 3 T TENSOR REMARK 3 T11: 0.5029 T22: 0.4875 REMARK 3 T33: 0.4078 T12: -0.0629 REMARK 3 T13: -0.0445 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.1880 L22: 2.0884 REMARK 3 L33: 5.2497 L12: 1.3067 REMARK 3 L13: 1.6941 L23: 1.4647 REMARK 3 S TENSOR REMARK 3 S11: 0.1695 S12: 0.6387 S13: 0.1225 REMARK 3 S21: -0.3853 S22: -0.2011 S23: 0.8353 REMARK 3 S31: -0.0248 S32: -0.5477 S33: 0.0539 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8JYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300039110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL44XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79311 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 48.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.520 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06600 REMARK 200 FOR THE DATA SET : 9.4600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.91200 REMARK 200 FOR SHELL : 1.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE PH5.5, 20% W/V REMARK 280 PEG3000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.14550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 122 REMARK 465 LEU A 123 REMARK 465 ASN A 124 REMARK 465 ASN A 125 REMARK 465 THR A 126 REMARK 465 THR A 127 REMARK 465 PRO A 128 REMARK 465 VAL A 129 REMARK 465 THR A 130 REMARK 465 GLY A 131 REMARK 465 ALA A 132 REMARK 465 THR A 216 REMARK 465 ALA A 217 REMARK 465 SER A 218 REMARK 465 HIS A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 GLY H 127 REMARK 465 SER H 128 REMARK 465 ALA H 129 REMARK 465 ALA H 130 REMARK 465 CYS H 215 REMARK 465 ASN L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 200 OE2 GLU L 154 2544 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET L 175 CG - SD - CE ANGL. DEV. = -12.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 49.47 -140.71 REMARK 500 LYS A 32 -133.11 54.79 REMARK 500 TYR A 163 -11.44 82.70 REMARK 500 SER H 99 34.33 -90.52 REMARK 500 ALA L 51 -40.72 68.62 REMARK 500 ARG L 68 -95.65 56.56 REMARK 500 ALA L 84 170.77 178.78 REMARK 500 ASN L 91 54.44 -146.96 REMARK 500 LEU L 95 99.83 -69.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 8JYR A 23 216 UNP P04626 ERBB2_HUMAN 23 216 DBREF 8JYR H 1 215 PDB 8JYR 8JYR 1 215 DBREF 8JYR L 1 214 PDB 8JYR 8JYR 1 214 SEQADV 8JYR ALA A 217 UNP P04626 EXPRESSION TAG SEQADV 8JYR SER A 218 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 219 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 220 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 221 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 222 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 223 UNP P04626 EXPRESSION TAG SEQADV 8JYR HIS A 224 UNP P04626 EXPRESSION TAG SEQRES 1 A 202 THR GLN VAL CYS THR GLY THR ASP MET LYS LEU ARG LEU SEQRES 2 A 202 PRO ALA SER PRO GLU THR HIS LEU ASP MET LEU ARG HIS SEQRES 3 A 202 LEU TYR GLN GLY CYS GLN VAL VAL GLN GLY ASN LEU GLU SEQRES 4 A 202 LEU THR TYR LEU PRO THR ASN ALA SER LEU SER PHE LEU SEQRES 5 A 202 GLN ASP ILE GLN GLU VAL GLN GLY TYR VAL LEU ILE ALA SEQRES 6 A 202 HIS ASN GLN VAL ARG GLN VAL PRO LEU GLN ARG LEU ARG SEQRES 7 A 202 ILE VAL ARG GLY THR GLN LEU PHE GLU ASP ASN TYR ALA SEQRES 8 A 202 LEU ALA VAL LEU ASP ASN GLY ASP PRO LEU ASN ASN THR SEQRES 9 A 202 THR PRO VAL THR GLY ALA SER PRO GLY GLY LEU ARG GLU SEQRES 10 A 202 LEU GLN LEU ARG SER LEU THR GLU ILE LEU LYS GLY GLY SEQRES 11 A 202 VAL LEU ILE GLN ARG ASN PRO GLN LEU CYS TYR GLN ASP SEQRES 12 A 202 THR ILE LEU TRP LYS ASP ILE PHE HIS LYS ASN ASN GLN SEQRES 13 A 202 LEU ALA LEU THR LEU ILE ASP THR ASN ARG SER ARG ALA SEQRES 14 A 202 CYS HIS PRO CYS SER PRO MET CYS LYS GLY SER ARG CYS SEQRES 15 A 202 TRP GLY GLU SER SER GLU ASP CYS GLN SER LEU THR ALA SEQRES 16 A 202 SER HIS HIS HIS HIS HIS HIS SEQRES 1 H 222 GLU ILE GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 222 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 222 TYR ALA PHE THR SER TYR ASN MET TYR TRP VAL LYS GLN SEQRES 4 H 222 SER HIS GLY LYS SER LEU GLU TRP ILE GLY TYR ILE ASP SEQRES 5 H 222 PRO LYS HIS GLY GLY THR SER TYR ASN GLN LYS PHE LYS SEQRES 6 H 222 GLY LYS ALA THR MET THR VAL ASP LYS SER SER ASN THR SEQRES 7 H 222 ALA ASN MET HIS LEU ASN SER LEU THR SER GLU ASP SER SEQRES 8 H 222 ALA VAL TYR TYR CYS ALA ARG MET ASN TYR GLY SER GLY SEQRES 9 H 222 TYR ALA MET ASP TYR TRP GLY GLN GLY THR SER VAL THR SEQRES 10 H 222 VAL SER SER ALA LYS THR THR PRO PRO SER VAL TYR PRO SEQRES 11 H 222 LEU ALA PRO GLY SER ALA ALA GLN THR ASN SER MET VAL SEQRES 12 H 222 THR LEU GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO SEQRES 13 H 222 VAL THR VAL THR TRP ASN SER GLY SER LEU SER SER GLY SEQRES 14 H 222 VAL HIS THR PHE PRO ALA VAL LEU GLN SER ASP LEU TYR SEQRES 15 H 222 THR LEU SER SER SER VAL THR VAL PRO SER SER THR TRP SEQRES 16 H 222 PRO SER GLU THR VAL THR CYS ASN VAL ALA HIS PRO ALA SEQRES 17 H 222 SER SER THR LYS VAL ASP LYS LYS ILE VAL PRO ARG ASP SEQRES 18 H 222 CYS SEQRES 1 L 218 ASN ILE VAL LEU THR GLN SER PRO ALA SER LEU ALA VAL SEQRES 2 L 218 SER LEU GLY GLN ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 GLU SER VAL ASP SER TYR GLY ASN SER PHE MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 PHE LEU ALA SER ASN LEU GLU SER GLY VAL PRO PRO ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER ARG THR ASP PHE THR LEU THR SEQRES 7 L 218 ILE ASP PRO VAL GLU ALA ASP ASP ALA ALA THR TYR TYR SEQRES 8 L 218 CYS GLN GLN ASN ASN GLU ASP LEU ARG THR PHE GLY GLY SEQRES 9 L 218 GLY THR LYS LEU GLU ILE LYS ARG ALA ASP ALA ALA PRO SEQRES 10 L 218 THR VAL SER ILE PHE PRO PRO SER SER GLU GLN LEU THR SEQRES 11 L 218 SER GLY GLY ALA SER VAL VAL CYS PHE LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO LYS ASP ILE ASN VAL LYS TRP LYS ILE ASP GLY SEQRES 13 L 218 SER GLU ARG GLN ASN GLY VAL LEU ASN SER TRP THR ASP SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER MET SER SER THR SEQRES 15 L 218 LEU THR LEU THR LYS ASP GLU TYR GLU ARG HIS ASN SER SEQRES 16 L 218 TYR THR CYS GLU ALA THR HIS LYS THR SER THR SER PRO SEQRES 17 L 218 ILE VAL LYS SER PHE ASN ARG ASN GLU CYS HET NAG A 301 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG C8 H15 N O6 FORMUL 5 HOH *475(H2 O) HELIX 1 AA1 SER A 38 GLN A 51 1 14 HELIX 2 AA2 LEU A 71 GLN A 75 5 5 HELIX 3 AA3 LEU A 107 ASP A 110 5 4 HELIX 4 AA4 TYR A 163 ILE A 167 5 5 HELIX 5 AA5 LEU A 168 ILE A 172 5 5 HELIX 6 AA6 CYS A 199 ARG A 203 5 5 HELIX 7 AA7 SER A 208 CYS A 212 5 5 HELIX 8 AA8 ALA H 28 TYR H 32 5 5 HELIX 9 AA9 GLN H 61 LYS H 64 5 4 HELIX 10 AB1 LYS H 73 SER H 75 5 3 HELIX 11 AB2 THR H 83 SER H 87 5 5 HELIX 12 AB3 SER H 156 SER H 158 5 3 HELIX 13 AB4 SER H 186 TRP H 188 5 3 HELIX 14 AB5 PRO H 200 SER H 203 5 4 HELIX 15 AB6 GLU L 79 ALA L 83 5 5 HELIX 16 AB7 SER L 121 GLY L 128 1 8 HELIX 17 AB8 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 5 VAL A 25 THR A 27 0 SHEET 2 AA1 5 VAL A 55 GLN A 57 1 O GLN A 57 N CYS A 26 SHEET 3 AA1 5 GLU A 79 VAL A 80 1 O GLU A 79 N VAL A 56 SHEET 4 AA1 5 ILE A 101 VAL A 102 1 O ILE A 101 N VAL A 80 SHEET 5 AA1 5 GLU A 147 ILE A 148 1 O GLU A 147 N VAL A 102 SHEET 1 AA2 5 LEU A 60 THR A 63 0 SHEET 2 AA2 5 VAL A 84 ALA A 87 1 O LEU A 85 N LEU A 62 SHEET 3 AA2 5 TYR A 112 LEU A 117 1 O ALA A 115 N ILE A 86 SHEET 4 AA2 5 GLY A 152 GLN A 156 1 O LEU A 154 N VAL A 116 SHEET 5 AA2 5 THR A 182 ILE A 184 1 O LEU A 183 N ILE A 155 SHEET 1 AA3 4 GLN H 3 GLN H 6 0 SHEET 2 AA3 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA3 4 THR H 77 LEU H 82 -1 O MET H 80 N VAL H 20 SHEET 4 AA3 4 ALA H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AA4 6 GLU H 10 VAL H 12 0 SHEET 2 AA4 6 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA4 6 ALA H 88 ASN H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA4 6 MET H 34 GLN H 39 -1 N TYR H 35 O ALA H 93 SHEET 5 AA4 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 AA4 6 THR H 57 TYR H 59 -1 O SER H 58 N TYR H 50 SHEET 1 AA5 4 GLU H 10 VAL H 12 0 SHEET 2 AA5 4 THR H 107 VAL H 111 1 O THR H 110 N GLU H 10 SHEET 3 AA5 4 ALA H 88 ASN H 96 -1 N ALA H 88 O VAL H 109 SHEET 4 AA5 4 ALA H 100B TRP H 103 -1 O ALA H 100B N ASN H 96 SHEET 1 AA6 4 SER H 120 LEU H 124 0 SHEET 2 AA6 4 MET H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA6 4 LEU H 174 PRO H 184 -1 O LEU H 177 N VAL H 142 SHEET 4 AA6 4 VAL H 163 THR H 165 -1 N HIS H 164 O SER H 180 SHEET 1 AA7 4 SER H 120 LEU H 124 0 SHEET 2 AA7 4 MET H 135 TYR H 145 -1 O GLY H 139 N LEU H 124 SHEET 3 AA7 4 LEU H 174 PRO H 184 -1 O LEU H 177 N VAL H 142 SHEET 4 AA7 4 VAL H 169 GLN H 171 -1 N GLN H 171 O LEU H 174 SHEET 1 AA8 3 THR H 151 TRP H 154 0 SHEET 2 AA8 3 THR H 194 HIS H 199 -1 O ASN H 196 N THR H 153 SHEET 3 AA8 3 THR H 204 LYS H 209 -1 O VAL H 206 N VAL H 197 SHEET 1 AA9 4 LEU L 4 SER L 7 0 SHEET 2 AA9 4 ALA L 19 ALA L 25 -1 O SER L 22 N SER L 7 SHEET 3 AA9 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA9 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AB1 6 SER L 10 SER L 14 0 SHEET 2 AB1 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AB1 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB1 6 MET L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB1 6 LYS L 45 PHE L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB1 6 ASN L 53 LEU L 54 -1 O ASN L 53 N PHE L 49 SHEET 1 AB2 4 SER L 10 SER L 14 0 SHEET 2 AB2 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AB2 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AB2 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB3 2 ASP L 30 SER L 30A 0 SHEET 2 AB3 2 ASN L 30D SER L 31 -1 O ASN L 30D N SER L 30A SHEET 1 AB4 4 THR L 114 PHE L 118 0 SHEET 2 AB4 4 GLY L 129 PHE L 139 -1 O PHE L 135 N SER L 116 SHEET 3 AB4 4 TYR L 173 THR L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AB4 4 VAL L 159 TRP L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB5 4 SER L 153 ARG L 155 0 SHEET 2 AB5 4 ASN L 145 ILE L 150 -1 N ILE L 150 O SER L 153 SHEET 3 AB5 4 SER L 191 THR L 197 -1 O THR L 193 N LYS L 149 SHEET 4 AB5 4 ILE L 205 ASN L 210 -1 O ILE L 205 N ALA L 196 SSBOND 1 CYS A 26 CYS A 53 1555 1555 2.08 SSBOND 2 CYS A 162 CYS A 192 1555 1555 2.04 SSBOND 3 CYS A 195 CYS A 204 1555 1555 2.05 SSBOND 4 CYS A 199 CYS A 212 1555 1555 2.04 SSBOND 5 CYS H 22 CYS H 92 1555 1555 2.02 SSBOND 6 CYS H 140 CYS H 195 1555 1555 2.03 SSBOND 7 CYS L 23 CYS L 88 1555 1555 2.21 SSBOND 8 CYS L 134 CYS L 194 1555 1555 2.11 LINK ND2 ASN A 68 C1 NAG A 301 1555 1555 1.45 CISPEP 1 PHE H 146 PRO H 147 0 -7.55 CISPEP 2 GLU H 148 PRO H 149 0 -0.53 CISPEP 3 TRP H 188 PRO H 189 0 8.79 CISPEP 4 SER L 7 PRO L 8 0 -6.32 CISPEP 5 ASP L 76 PRO L 77 0 -1.13 CISPEP 6 TYR L 140 PRO L 141 0 -0.07 CRYST1 53.979 112.291 60.537 90.00 90.76 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018526 0.000000 0.000246 0.00000 SCALE2 0.000000 0.008905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016520 0.00000