HEADER RNA 10-JUL-23 8K0Y TITLE CRYSTAL STRUCTURE OF A MEDAKA MASCRNA U23G COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA (56-MER); COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: ORYZIAS LATIPES; SOURCE 4 ORGANISM_TAXID: 8090 KEYWDS MASCRNA, TRNA-LIKE, MALAT1, RNA EXPDTA X-RAY DIFFRACTION AUTHOR Y.HE,J.DENG,X.LIN,L.HUANG REVDAT 1 15-JAN-25 8K0Y 0 JRNL AUTH Y.HE,J.DENG,X.LIN,L.HUANG JRNL TITL CRYSTAL STRUCTURE OF MASCRNA AND MENRNA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.28 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.28 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 17707 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0800 - 5.3500 0.96 2500 142 0.2631 0.2720 REMARK 3 2 5.3500 - 4.2500 0.97 2519 104 0.2049 0.2535 REMARK 3 3 4.2500 - 3.7200 0.97 2543 135 0.1794 0.2117 REMARK 3 4 3.7100 - 3.3800 0.96 2494 129 0.2050 0.2333 REMARK 3 5 3.3800 - 3.1300 0.95 2438 153 0.1982 0.3002 REMARK 3 6 3.1300 - 2.9500 0.94 2381 147 0.2273 0.2773 REMARK 3 7 2.9500 - 2.8000 0.96 2534 130 0.3002 0.3296 REMARK 3 8 2.8000 - 2.6800 0.99 2494 120 0.3128 0.3220 REMARK 3 9 2.6800 - 2.5800 0.99 2634 132 0.3202 0.3632 REMARK 3 10 2.5800 - 2.4900 1.00 2593 128 0.3328 0.3508 REMARK 3 11 2.4900 - 2.4100 0.99 2535 139 0.3429 0.4083 REMARK 3 12 2.4100 - 2.3400 0.99 2577 153 0.3853 0.4188 REMARK 3 13 2.3400 - 2.2800 0.98 2489 145 0.4235 0.4527 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.362 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.179 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 63.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2387 REMARK 3 ANGLE : 0.961 3713 REMARK 3 CHIRALITY : 0.041 500 REMARK 3 PLANARITY : 0.008 100 REMARK 3 DIHEDRAL : 11.711 1185 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.8204 22.3777 54.8069 REMARK 3 T TENSOR REMARK 3 T11: 0.5810 T22: 0.5398 REMARK 3 T33: 0.8046 T12: 0.0145 REMARK 3 T13: -0.0896 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.3888 L22: 0.4329 REMARK 3 L33: 0.3756 L12: -0.4142 REMARK 3 L13: 0.1328 L23: 0.1714 REMARK 3 S TENSOR REMARK 3 S11: 0.2316 S12: 0.4946 S13: -0.4877 REMARK 3 S21: 0.2730 S22: -0.3076 S23: 0.4233 REMARK 3 S31: 0.1392 S32: 0.2916 S33: 0.0001 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.0155 14.0770 68.2263 REMARK 3 T TENSOR REMARK 3 T11: 1.0350 T22: 0.9441 REMARK 3 T33: 0.5106 T12: -0.1011 REMARK 3 T13: -0.3273 T23: 0.2151 REMARK 3 L TENSOR REMARK 3 L11: 1.4447 L22: 0.0945 REMARK 3 L33: 0.1661 L12: 0.3729 REMARK 3 L13: 0.0285 L23: 0.0227 REMARK 3 S TENSOR REMARK 3 S11: 0.3303 S12: -1.1501 S13: -1.2566 REMARK 3 S21: 0.4352 S22: -0.2317 S23: -0.6025 REMARK 3 S31: -0.0571 S32: 0.1915 S33: 0.0100 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.4522 16.4255 52.4879 REMARK 3 T TENSOR REMARK 3 T11: 0.5922 T22: 0.6084 REMARK 3 T33: 0.5213 T12: 0.0781 REMARK 3 T13: -0.0107 T23: 0.0415 REMARK 3 L TENSOR REMARK 3 L11: 1.2205 L22: 0.2409 REMARK 3 L33: 0.3289 L12: 0.5175 REMARK 3 L13: -0.5678 L23: -0.1109 REMARK 3 S TENSOR REMARK 3 S11: -0.3725 S12: 0.0195 S13: -0.2919 REMARK 3 S21: 0.5580 S22: 0.1341 S23: 0.2043 REMARK 3 S31: 0.0071 S32: 0.2380 S33: 0.0007 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5976 34.5847 57.0908 REMARK 3 T TENSOR REMARK 3 T11: 0.6554 T22: 0.6541 REMARK 3 T33: 0.6969 T12: 0.0714 REMARK 3 T13: 0.0614 T23: -0.1576 REMARK 3 L TENSOR REMARK 3 L11: 0.7965 L22: 0.2826 REMARK 3 L33: 0.5405 L12: 0.4912 REMARK 3 L13: 0.4719 L23: 0.4305 REMARK 3 S TENSOR REMARK 3 S11: 0.4256 S12: 0.9891 S13: -0.1194 REMARK 3 S21: 0.4010 S22: 0.0527 S23: -0.3782 REMARK 3 S31: 0.0455 S32: -0.4595 S33: 0.0353 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8307 42.5135 76.4583 REMARK 3 T TENSOR REMARK 3 T11: 1.7386 T22: 1.4845 REMARK 3 T33: 0.8045 T12: -0.1118 REMARK 3 T13: 0.2858 T23: -0.2374 REMARK 3 L TENSOR REMARK 3 L11: 0.0710 L22: 0.6122 REMARK 3 L33: 0.0509 L12: -0.0464 REMARK 3 L13: 0.0417 L23: 0.0981 REMARK 3 S TENSOR REMARK 3 S11: 0.4945 S12: -1.2714 S13: 0.9468 REMARK 3 S21: 0.5644 S22: 0.7466 S23: 0.3300 REMARK 3 S31: -0.8419 S32: 0.3952 S33: 0.0337 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 32 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0829 48.6086 55.1679 REMARK 3 T TENSOR REMARK 3 T11: 0.7599 T22: 0.7610 REMARK 3 T33: 0.7633 T12: 0.0903 REMARK 3 T13: 0.0572 T23: 0.0411 REMARK 3 L TENSOR REMARK 3 L11: 0.4088 L22: 0.1350 REMARK 3 L33: 0.2810 L12: 0.0018 REMARK 3 L13: -0.2133 L23: 0.1640 REMARK 3 S TENSOR REMARK 3 S11: -0.2471 S12: 0.0598 S13: 0.2318 REMARK 3 S21: 0.4719 S22: 0.2281 S23: 0.4953 REMARK 3 S31: -0.1653 S32: -0.5409 S33: -0.0006 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9152 36.6975 54.5609 REMARK 3 T TENSOR REMARK 3 T11: 0.6087 T22: 0.6308 REMARK 3 T33: 0.9922 T12: 0.0546 REMARK 3 T13: -0.0322 T23: -0.1655 REMARK 3 L TENSOR REMARK 3 L11: 0.5422 L22: 0.5156 REMARK 3 L33: -0.0122 L12: 0.5396 REMARK 3 L13: 0.1188 L23: 0.1473 REMARK 3 S TENSOR REMARK 3 S11: -0.2344 S12: 0.3930 S13: -0.6798 REMARK 3 S21: 0.3318 S22: 0.2685 S23: -0.8750 REMARK 3 S31: -0.0334 S32: -0.1466 S33: 0.0031 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 11 or REMARK 3 resid 13 through 56)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 22 or REMARK 3 resid 29 through 56)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K0Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC. REMARK 100 THE DEPOSITION ID IS D_1300039207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL10U2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 28.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 1.17400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M STRONTIUM CHLORIDE HEXAHYDRATE, REMARK 280 0.02 M MAGNESIUM CHLORIDE HEXAHYDRATE, 18% V/V (+ / -)-2-METHYL- REMARK 280 2,4-PENTANEDIOL, 0.012 M SPERMINE TETRAHYDROCHLORIDE, PH 7.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.68000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 14.62500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.68000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 14.62500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 G A 23 REMARK 465 U A 24 REMARK 465 U A 25 REMARK 465 U A 26 REMARK 465 U A 27 REMARK 465 C A 28 REMARK 465 U B 12 REMARK 465 U B 24 REMARK 465 U B 25 REMARK 465 U B 26 REMARK 465 U B 27 REMARK 465 C B 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 201 O HOH A 206 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 A B 42 O5' - P - OP2 ANGL. DEV. = -6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 105 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G A 8 OP1 REMARK 620 2 U A 43 O2 169.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 111 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 8 OP1 REMARK 620 2 U B 43 O2 129.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 108 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 G B 35 O6 REMARK 620 2 G B 36 O6 67.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 109 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 U B 38 O4 REMARK 620 2 U B 39 O4 73.8 REMARK 620 3 HOH B 202 O 106.6 49.0 REMARK 620 N 1 2 DBREF 8K0Y A 1 56 PDB 8K0Y 8K0Y 1 56 DBREF 8K0Y B 1 56 PDB 8K0Y 8K0Y 1 56 SEQRES 1 A 56 G A C G C C G G U G G U G SEQRES 2 A 56 G C A C U C C U G G U U U SEQRES 3 A 56 U C A G G A C G G G G U U SEQRES 4 A 56 C A A U U C C C U G C G G SEQRES 5 A 56 U G U C SEQRES 1 B 56 G A C G C C G G U G G U G SEQRES 2 B 56 G C A C U C C U G G U U U SEQRES 3 B 56 U C A G G A C G G G G U U SEQRES 4 B 56 C A A U U C C C U G C G G SEQRES 5 B 56 U G U C HET IR A 101 1 HET IR A 102 1 HET IR A 103 1 HET IR A 104 1 HET NA A 105 1 HET NA A 106 1 HET NA A 107 1 HET NA A 108 1 HET NA A 109 1 HET IR B 101 1 HET IR B 102 1 HET IR B 103 1 HET NA B 104 1 HET NA B 105 1 HET NA B 106 1 HET NA B 107 1 HET NA B 108 1 HET NA B 109 1 HET NA B 110 1 HET NA B 111 1 HETNAM IR IRIDIUM ION HETNAM NA SODIUM ION FORMUL 3 IR 7(IR 4+) FORMUL 7 NA 13(NA 1+) FORMUL 23 HOH *14(H2 O) LINK OP1 G A 8 NA NA A 105 1555 1555 2.33 LINK OP2 C A 33 NA NA A 106 1555 1555 3.06 LINK O4 U A 39 NA NA A 107 1555 1555 2.51 LINK O2 U A 43 NA NA A 105 1555 1555 2.71 LINK OP1 G B 8 NA NA B 111 1555 1555 2.42 LINK O6 G B 35 NA NA B 108 1555 1555 3.18 LINK O6 G B 36 NA NA B 108 1555 1555 2.60 LINK O4 U B 38 NA NA B 109 1555 1555 2.62 LINK O4 U B 39 NA NA B 109 1555 1555 2.66 LINK O2 U B 43 NA NA B 111 1555 1555 2.95 LINK IR IR B 102 O HOH B 207 1555 1555 2.30 LINK NA NA B 109 O HOH B 202 1555 1555 3.05 CRYST1 159.360 29.250 98.080 90.00 118.56 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006275 0.000000 0.003416 0.00000 SCALE2 0.000000 0.034188 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011608 0.00000 MTRIX1 1 -0.999188 0.039931 0.005422 65.47704 1 MTRIX2 1 -0.039817 -0.999012 0.019726 57.90834 1 MTRIX3 1 0.006204 0.019494 0.999791 0.50193 1