HEADER RNA BINDING PROTEIN 12-JUL-23 8K2E TITLE CRYSTAL STRUCTURE OF YTHDC1 AND Y3 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: YTH DOMAIN-CONTAINING PROTEIN 1; COMPND 3 CHAIN: B, A; COMPND 4 SYNONYM: SPLICING FACTOR YT521,YT521-B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: YTHDC1, KIAA1966, YT521; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INHIBITOR, COMPLEX, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR H.L.ZHANG,S.Y.YANG REVDAT 1 17-JUL-24 8K2E 0 JRNL AUTH Y.JIANG,G.ZHANG,J.YOU,H.ZHANG,R.YAO,H.XIE,L.ZHANG,Z.XIA, JRNL AUTH 2 M.DAI,Y.WU,L.LI,S.YANG JRNL TITL POCKETFLOW IS A DATA-AND-KNOWLEDGE-DRIVEN STRUCTURE-BASED JRNL TITL 2 MOLECULAR GENERATIVE MODEL JRNL REF NAT. MACH. INTELL. V. 6 326 2024 JRNL DOI 10.1038/S42256-024-00808-8 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 43198 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 2136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.7100 - 3.9400 1.00 2763 158 0.1586 0.1773 REMARK 3 2 3.9400 - 3.1300 1.00 2779 136 0.1681 0.2374 REMARK 3 3 3.1300 - 2.7400 1.00 2764 140 0.1982 0.2210 REMARK 3 4 2.7300 - 2.4900 1.00 2711 167 0.2017 0.2440 REMARK 3 5 2.4900 - 2.3100 1.00 2754 140 0.1888 0.2224 REMARK 3 6 2.3100 - 2.1700 1.00 2751 149 0.1811 0.2189 REMARK 3 7 2.1700 - 2.0600 1.00 2737 144 0.1929 0.2166 REMARK 3 8 2.0600 - 1.9700 1.00 2729 145 0.1943 0.2532 REMARK 3 9 1.9700 - 1.9000 1.00 2738 131 0.1981 0.2420 REMARK 3 10 1.9000 - 1.8300 1.00 2780 125 0.1898 0.2212 REMARK 3 11 1.8300 - 1.7700 1.00 2745 154 0.1948 0.2322 REMARK 3 12 1.7700 - 1.7200 1.00 2722 143 0.1962 0.2313 REMARK 3 13 1.7200 - 1.6800 1.00 2747 137 0.2045 0.2518 REMARK 3 14 1.6800 - 1.6400 1.00 2743 129 0.2103 0.2481 REMARK 3 15 1.6400 - 1.6000 0.96 2599 138 0.2109 0.2530 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.181 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.488 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.52 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2688 REMARK 3 ANGLE : 1.332 3643 REMARK 3 CHIRALITY : 0.083 397 REMARK 3 PLANARITY : 0.010 459 REMARK 3 DIHEDRAL : 6.345 353 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 11.9223 9.4386 8.1748 REMARK 3 T TENSOR REMARK 3 T11: 0.0462 T22: 0.0556 REMARK 3 T33: 0.0490 T12: 0.0008 REMARK 3 T13: -0.0041 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.1617 L22: 0.5866 REMARK 3 L33: 0.1364 L12: 0.2037 REMARK 3 L13: -0.1034 L23: -0.1918 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: 0.0512 S13: 0.0067 REMARK 3 S21: -0.0277 S22: 0.0427 S23: 0.0836 REMARK 3 S31: -0.0278 S32: -0.0016 S33: 0.0078 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 343 through 377 or REMARK 3 resid 379 through 384 or (resid 385 REMARK 3 through 386 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 387 through 417 or (resid 418 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 419 or (resid 420 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 421 through 422 or (resid 424 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 425 through 447 REMARK 3 or resid 449 through 466 or resid 468 REMARK 3 through 495 or (resid 496 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 497 through 507)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 343 through 377 or REMARK 3 resid 379 through 432 or resid 434 REMARK 3 through 447 or resid 449 through 456 or REMARK 3 (resid 457 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD )) or resid 458 through 466 or resid REMARK 3 468 through 474 or (resid 475 and (name N REMARK 3 or name CA or name C or name O or name CB REMARK 3 )) or resid 476 through 482 or (resid 483 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG )) or resid 484 REMARK 3 through 507)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300039206. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL19U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 7.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43363 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.44900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.70 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS AT PH 6.5, 0.2M AMMONIUM REMARK 280 SULFATE, 25% PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.75750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 422 REMARK 465 GLY A 433 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 385 CG CD CE NZ REMARK 470 LYS B 386 CG CD CE NZ REMARK 470 ARG B 395 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 418 CG CD OE1 OE2 REMARK 470 HIS B 420 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 424 OG REMARK 470 LYS B 437 CG CD CE NZ REMARK 470 LYS B 444 CE NZ REMARK 470 GLU B 496 CG CD OE1 OE2 REMARK 470 ARG A 395 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 437 CG CD CE NZ REMARK 470 LYS A 444 CE NZ REMARK 470 LYS A 457 CE NZ REMARK 470 ARG A 475 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 483 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER A 344 O HOH B 801 1655 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 344 34.43 -55.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 844 DISTANCE = 6.84 ANGSTROMS DBREF 8K2E B 345 507 UNP Q96MU7 YTDC1_HUMAN 345 507 DBREF 8K2E A 345 507 UNP Q96MU7 YTDC1_HUMAN 345 507 SEQADV 8K2E GLY B 343 UNP Q96MU7 EXPRESSION TAG SEQADV 8K2E SER B 344 UNP Q96MU7 EXPRESSION TAG SEQADV 8K2E GLY A 343 UNP Q96MU7 EXPRESSION TAG SEQADV 8K2E SER A 344 UNP Q96MU7 EXPRESSION TAG SEQRES 1 B 165 GLY SER THR SER LYS LEU LYS TYR VAL LEU GLN ASP ALA SEQRES 2 B 165 ARG PHE PHE LEU ILE LYS SER ASN ASN HIS GLU ASN VAL SEQRES 3 B 165 SER LEU ALA LYS ALA LYS GLY VAL TRP SER THR LEU PRO SEQRES 4 B 165 VAL ASN GLU LYS LYS LEU ASN LEU ALA PHE ARG SER ALA SEQRES 5 B 165 ARG SER VAL ILE LEU ILE PHE SER VAL ARG GLU SER GLY SEQRES 6 B 165 LYS PHE GLN GLY PHE ALA ARG LEU SER SER GLU SER HIS SEQRES 7 B 165 HIS GLY GLY SER PRO ILE HIS TRP VAL LEU PRO ALA GLY SEQRES 8 B 165 MET SER ALA LYS MET LEU GLY GLY VAL PHE LYS ILE ASP SEQRES 9 B 165 TRP ILE CYS ARG ARG GLU LEU PRO PHE THR LYS SER ALA SEQRES 10 B 165 HIS LEU THR ASN PRO TRP ASN GLU HIS LYS PRO VAL LYS SEQRES 11 B 165 ILE GLY ARG ASP GLY GLN GLU ILE GLU LEU GLU CYS GLY SEQRES 12 B 165 THR GLN LEU CYS LEU LEU PHE PRO PRO ASP GLU SER ILE SEQRES 13 B 165 ASP LEU TYR GLN VAL ILE HIS LYS MET SEQRES 1 A 165 GLY SER THR SER LYS LEU LYS TYR VAL LEU GLN ASP ALA SEQRES 2 A 165 ARG PHE PHE LEU ILE LYS SER ASN ASN HIS GLU ASN VAL SEQRES 3 A 165 SER LEU ALA LYS ALA LYS GLY VAL TRP SER THR LEU PRO SEQRES 4 A 165 VAL ASN GLU LYS LYS LEU ASN LEU ALA PHE ARG SER ALA SEQRES 5 A 165 ARG SER VAL ILE LEU ILE PHE SER VAL ARG GLU SER GLY SEQRES 6 A 165 LYS PHE GLN GLY PHE ALA ARG LEU SER SER GLU SER HIS SEQRES 7 A 165 HIS GLY GLY SER PRO ILE HIS TRP VAL LEU PRO ALA GLY SEQRES 8 A 165 MET SER ALA LYS MET LEU GLY GLY VAL PHE LYS ILE ASP SEQRES 9 A 165 TRP ILE CYS ARG ARG GLU LEU PRO PHE THR LYS SER ALA SEQRES 10 A 165 HIS LEU THR ASN PRO TRP ASN GLU HIS LYS PRO VAL LYS SEQRES 11 A 165 ILE GLY ARG ASP GLY GLN GLU ILE GLU LEU GLU CYS GLY SEQRES 12 A 165 THR GLN LEU CYS LEU LEU PHE PRO PRO ASP GLU SER ILE SEQRES 13 A 165 ASP LEU TYR GLN VAL ILE HIS LYS MET HET VIM B 601 25 HET SO4 B 602 5 HET VIM A 601 25 HET SO4 A 602 5 HETNAM VIM 2-CHLORANYL-6-(4-FLUORANYLPHENOXY)BENZOIC ACID HETNAM SO4 SULFATE ION FORMUL 3 VIM 2(C13 H8 CL F O3) FORMUL 4 SO4 2(O4 S 2-) FORMUL 7 HOH *275(H2 O) HELIX 1 AA1 THR B 345 GLN B 353 1 9 HELIX 2 AA2 ASN B 364 GLY B 375 1 12 HELIX 3 AA3 LEU B 380 ALA B 394 1 15 HELIX 4 AA4 SER B 435 LEU B 439 5 5 HELIX 5 AA5 THR B 456 ALA B 459 5 4 HELIX 6 AA6 ASN B 463 GLU B 467 5 5 HELIX 7 AA7 GLU B 481 PHE B 492 1 12 HELIX 8 AA8 LEU B 500 MET B 507 1 8 HELIX 9 AA9 THR A 345 GLN A 353 1 9 HELIX 10 AB1 ASN A 364 GLY A 375 1 12 HELIX 11 AB2 LEU A 380 ALA A 394 1 15 HELIX 12 AB3 SER A 435 LEU A 439 5 5 HELIX 13 AB4 THR A 456 ALA A 459 5 4 HELIX 14 AB5 ASN A 463 GLU A 467 5 5 HELIX 15 AB6 GLU A 481 PHE A 492 1 12 HELIX 16 AB7 ASP A 499 LYS A 506 1 8 SHEET 1 AA1 6 VAL B 376 SER B 378 0 SHEET 2 AA1 6 VAL B 442 CYS B 449 -1 O PHE B 443 N TRP B 377 SHEET 3 AA1 6 GLY B 411 LEU B 415 -1 N PHE B 412 O ILE B 448 SHEET 4 AA1 6 SER B 396 PHE B 401 -1 N LEU B 399 O ALA B 413 SHEET 5 AA1 6 ALA B 355 ILE B 360 1 N ARG B 356 O ILE B 398 SHEET 6 AA1 6 GLU B 479 ILE B 480 -1 O ILE B 480 N PHE B 357 SHEET 1 AA2 2 LYS B 408 PHE B 409 0 SHEET 2 AA2 2 LEU B 453 PRO B 454 -1 O LEU B 453 N PHE B 409 SHEET 1 AA3 6 VAL A 376 SER A 378 0 SHEET 2 AA3 6 VAL A 442 CYS A 449 -1 O PHE A 443 N TRP A 377 SHEET 3 AA3 6 GLY A 411 LEU A 415 -1 N ARG A 414 O ASP A 446 SHEET 4 AA3 6 VAL A 397 VAL A 403 -1 N LEU A 399 O ALA A 413 SHEET 5 AA3 6 ARG A 356 SER A 362 1 N ARG A 356 O ILE A 398 SHEET 6 AA3 6 GLU A 479 ILE A 480 -1 O ILE A 480 N PHE A 357 SHEET 1 AA4 2 LYS A 408 PHE A 409 0 SHEET 2 AA4 2 LEU A 453 PRO A 454 -1 O LEU A 453 N PHE A 409 CRYST1 39.644 103.515 41.815 90.00 102.43 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025224 0.000000 0.005558 0.00000 SCALE2 0.000000 0.009660 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024488 0.00000