HEADER CHAPERONE 13-JUL-23 8K2R TITLE THE STRUCTURE OF HTPG M DOMAIN IN COMPLEX WITH UNSTRUCTURED D131D TITLE 2 BINDING SITE B COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOLECULAR CHAPERONE HTPG (FRAGMENT); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEAT SHOCK PROTEIN 90 (HSP90) M DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DISORDERED PROTEIN(D131D); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: HTPG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 10 ORGANISM_TAXID: 1280; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS E.COLI HSP90, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.QU,C.HUANG REVDAT 2 03-JUL-24 8K2R 1 JRNL REVDAT 1 26-JUN-24 8K2R 0 JRNL AUTH X.QU,S.ZHAO,C.WAN,L.ZHU,T.JI,P.ROSSI,J.WANG,C.G.KALODIMOS, JRNL AUTH 2 C.WANG,W.XU,C.HUANG JRNL TITL STRUCTURAL BASIS FOR THE DYNAMIC CHAPERONING OF DISORDERED JRNL TITL 2 CLIENTS BY HSP90. JRNL REF NAT.STRUCT.MOL.BIOL. 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38890550 JRNL DOI 10.1038/S41594-024-01337-Z REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300038150. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 PA REMARK 210 SAMPLE CONTENTS : 500 UM [U-100% 15N] HEAT SHOCK REMARK 210 PROTEIN 90 (HSP90) M DOMAIN, 500 REMARK 210 UM [U-10% 13C; U-99% 15N] HEAT REMARK 210 SHOCK PROTEIN 90 (HSP90) M REMARK 210 DOMAIN, 500 UM [U-13C; U-15N; U- REMARK 210 2H] HEAT SHOCK PROTEIN 90 (HSP90) REMARK 210 M DOMAIN, 500 UM [U-100% 13C; U- REMARK 210 100% 15N] DISORDERED PROTEIN REMARK 210 (D131D), 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 3D 1H-13C NOESY; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D 1H-15N REMARK 210 NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRVIEW, NMRPIPE REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A 227 REMARK 465 HIS A 228 REMARK 465 MET A 229 REMARK 465 LEU B 597 REMARK 465 GLU B 598 REMARK 465 HIS B 599 REMARK 465 MET B 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 306 -65.23 -108.90 REMARK 500 1 THR A 413 -60.09 -102.95 REMARK 500 1 GLU B 604 -31.99 76.69 REMARK 500 1 VAL B 605 -64.42 79.65 REMARK 500 1 GLU B 606 -53.93 -153.02 REMARK 500 1 PHE B 607 -63.03 -124.20 REMARK 500 1 ASP B 608 -50.00 74.83 REMARK 500 1 LYS B 609 104.06 -59.35 REMARK 500 1 GLN B 611 -74.75 -106.75 REMARK 500 1 ASP B 614 -82.33 58.83 REMARK 500 1 LYS B 615 99.64 58.22 REMARK 500 1 ARG B 618 104.88 -168.45 REMARK 500 1 ILE B 623 -96.74 -126.91 REMARK 500 1 TYR B 624 152.98 179.34 REMARK 500 1 MET B 629 -55.97 -142.63 REMARK 500 1 ASN B 631 88.02 68.37 REMARK 500 1 VAL B 635 20.72 -142.95 REMARK 500 1 GLN B 637 97.43 54.61 REMARK 500 1 TYR B 646 106.05 69.49 REMARK 500 1 ASN B 650 104.94 65.87 REMARK 500 1 HIS B 652 -29.25 173.59 REMARK 500 1 GLN B 654 -11.32 75.43 REMARK 500 1 ARG B 657 -68.49 70.58 REMARK 500 1 LYS B 658 -56.51 -144.65 REMARK 500 1 ALA B 663 93.57 -66.39 REMARK 500 1 LYS B 664 -43.53 179.74 REMARK 500 1 LYS B 665 -152.35 -80.92 REMARK 500 1 LEU B 668 72.28 62.04 REMARK 500 1 ILE B 670 90.13 68.84 REMARK 500 2 ASP A 256 -166.44 -125.64 REMARK 500 2 LYS A 294 -39.49 -154.18 REMARK 500 2 ILE A 306 -65.21 -109.69 REMARK 500 2 ASP A 367 108.31 -166.53 REMARK 500 2 ASP A 487 -153.66 -126.27 REMARK 500 2 GLU B 604 -77.32 -125.62 REMARK 500 2 VAL B 605 -169.11 -105.22 REMARK 500 2 THR B 613 87.44 -69.76 REMARK 500 2 TYR B 616 -89.10 49.80 REMARK 500 2 ARG B 618 -177.71 66.09 REMARK 500 2 LEU B 620 152.10 72.25 REMARK 500 2 ALA B 621 -157.44 72.60 REMARK 500 2 TYR B 622 -175.85 68.06 REMARK 500 2 ILE B 623 -32.31 76.90 REMARK 500 2 TYR B 624 162.65 80.58 REMARK 500 2 VAL B 630 83.11 77.91 REMARK 500 2 ALA B 633 37.29 -150.60 REMARK 500 2 LYS B 641 -78.69 -68.28 REMARK 500 2 VAL B 642 -31.80 65.34 REMARK 500 2 ALA B 643 75.10 -69.97 REMARK 500 2 TYR B 644 51.57 160.34 REMARK 500 REMARK 500 THIS ENTRY HAS 593 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36580 RELATED DB: BMRB REMARK 900 THE STRUCTURE OF HTPG M DOMAIN IN COMPLEX WITH UNSTRUCTURED D131D REMARK 900 BINDING SITE B DBREF1 8K2R A 230 494 UNP A0A7A6VTW3_ECOLX DBREF2 8K2R A A0A7A6VTW3 230 494 DBREF 8K2R B 601 671 UNP P00644 NUC_STAAU 152 222 SEQADV 8K2R GLY A 227 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2R HIS A 228 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2R MET A 229 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2R LEU B 597 UNP P00644 EXPRESSION TAG SEQADV 8K2R GLU B 598 UNP P00644 EXPRESSION TAG SEQADV 8K2R HIS B 599 UNP P00644 EXPRESSION TAG SEQADV 8K2R MET B 600 UNP P00644 EXPRESSION TAG SEQRES 1 A 268 GLY HIS MET ALA GLN ALA LEU TRP THR ARG ASN LYS SER SEQRES 2 A 268 GLU ILE THR ASP GLU GLU TYR LYS GLU PHE TYR LYS HIS SEQRES 3 A 268 ILE ALA HIS ASP PHE ASN ASP PRO LEU THR TRP SER HIS SEQRES 4 A 268 ASN ARG VAL GLU GLY LYS GLN GLU TYR THR SER LEU LEU SEQRES 5 A 268 TYR ILE PRO SER GLN ALA PRO TRP ASP MET TRP ASN ARG SEQRES 6 A 268 ASP HIS LYS HIS GLY LEU LYS LEU TYR VAL GLN ARG VAL SEQRES 7 A 268 PHE ILE MET ASP ASP ALA GLU GLN PHE MET PRO ASN TYR SEQRES 8 A 268 LEU ARG PHE VAL ARG GLY LEU ILE ASP SER SER ASP LEU SEQRES 9 A 268 PRO LEU ASN VAL SER ARG GLU ILE LEU GLN ASP SER THR SEQRES 10 A 268 VAL THR ARG ASN LEU ARG ASN ALA LEU THR LYS ARG VAL SEQRES 11 A 268 LEU GLN MET LEU GLU LYS LEU ALA LYS ASP ASP ALA GLU SEQRES 12 A 268 LYS TYR GLN THR PHE TRP GLN GLN PHE GLY LEU VAL LEU SEQRES 13 A 268 LYS GLU GLY PRO ALA GLU ASP PHE ALA ASN GLN GLU ALA SEQRES 14 A 268 ILE ALA LYS LEU LEU ARG PHE ALA SER THR HIS THR ASP SEQRES 15 A 268 SER SER ALA GLN THR VAL SER LEU GLU ASP TYR VAL SER SEQRES 16 A 268 ARG MET LYS GLU GLY GLN GLU LYS ILE TYR TYR ILE THR SEQRES 17 A 268 ALA ASP SER TYR ALA ALA ALA LYS SER SER PRO HIS LEU SEQRES 18 A 268 GLU LEU LEU ARG LYS LYS GLY ILE GLU VAL LEU LEU LEU SEQRES 19 A 268 SER ASP ARG ILE ASP GLU TRP MET MET ASN TYR LEU THR SEQRES 20 A 268 GLU PHE ASP GLY LYS PRO PHE GLN SER VAL SER LYS VAL SEQRES 21 A 268 ASP GLU SER LEU GLU LYS LEU ALA SEQRES 1 B 75 LEU GLU HIS MET LYS LYS ILE GLU VAL GLU PHE ASP LYS SEQRES 2 B 75 GLY GLN ARG THR ASP LYS TYR GLY ARG GLY LEU ALA TYR SEQRES 3 B 75 ILE TYR ALA ASP GLY LYS MET VAL ASN GLU ALA LEU VAL SEQRES 4 B 75 ARG GLN GLY LEU ALA LYS VAL ALA TYR VAL TYR LYS PRO SEQRES 5 B 75 ASN ASN THR HIS GLU GLN HIS LEU ARG LYS SER GLU ALA SEQRES 6 B 75 GLN ALA LYS LYS GLU LYS LEU ASN ILE TRP HELIX 1 AA1 THR A 242 ALA A 254 1 13 HELIX 2 AA2 PRO A 285 TRP A 289 5 5 HELIX 3 AA3 GLU A 311 MET A 314 5 4 HELIX 4 AA4 SER A 335 SER A 342 1 8 HELIX 5 AA5 SER A 342 ASP A 367 1 26 HELIX 6 AA6 ASP A 367 LYS A 383 1 17 HELIX 7 AA7 GLU A 384 ASP A 389 1 6 HELIX 8 AA8 ASN A 392 LEU A 400 1 9 HELIX 9 AA9 LEU A 416 MET A 423 1 8 HELIX 10 AB1 SER A 437 SER A 443 1 7 HELIX 11 AB2 SER A 444 LYS A 452 1 9 HELIX 12 AB3 ILE A 464 ASN A 470 1 7 HELIX 13 AB4 ASP A 487 ALA A 494 1 8 SHEET 1 AA1 5 PRO A 260 VAL A 268 0 SHEET 2 AA1 5 TYR A 274 PRO A 281 -1 O SER A 276 N ASN A 266 SHEET 3 AA1 5 ARG A 322 SER A 327 -1 O ASP A 326 N THR A 275 SHEET 4 AA1 5 LEU A 297 VAL A 301 1 N TYR A 300 O ILE A 325 SHEET 5 AA1 5 VAL A 304 ALA A 310 -1 O ALA A 310 N LEU A 297 SHEET 1 AA2 6 VAL A 414 SER A 415 0 SHEET 2 AA2 6 ARG A 401 SER A 404 -1 N PHE A 402 O VAL A 414 SHEET 3 AA2 6 LEU A 458 LEU A 460 -1 O LEU A 459 N ALA A 403 SHEET 4 AA2 6 ILE A 430 THR A 434 1 N TYR A 431 O LEU A 458 SHEET 5 AA2 6 LYS A 478 SER A 482 1 O GLN A 481 N TYR A 432 SHEET 6 AA2 6 GLU A 474 PHE A 475 -1 N PHE A 475 O LYS A 478 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1