HEADER CHAPERONE 13-JUL-23 8K2S TITLE THE STRUCTURE OF HTPG M DOMAIN IN COMPLEX WITH UNSTRUCTURED D131D TITLE 2 BINDING SITE A COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOLECULAR CHAPERONE HTPG (FRAGMENT); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEAT SHOCK PROTEIN 90(HTPG) M DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DISORDERED PROTEIN (D131D); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: HTPG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 10 ORGANISM_TAXID: 1280; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS E.COLI HSP90, CHAPERONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.QU,C.HUANG REVDAT 2 03-JUL-24 8K2S 1 JRNL REVDAT 1 26-JUN-24 8K2S 0 JRNL AUTH X.QU,S.ZHAO,C.WAN,L.ZHU,T.JI,P.ROSSI,J.WANG,C.G.KALODIMOS, JRNL AUTH 2 C.WANG,W.XU,C.HUANG JRNL TITL STRUCTURAL BASIS FOR THE DYNAMIC CHAPERONING OF DISORDERED JRNL TITL 2 CLIENTS BY HSP90. JRNL REF NAT.STRUCT.MOL.BIOL. 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38890550 JRNL DOI 10.1038/S41594-024-01337-Z REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K2S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1300038125. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : 1 PA REMARK 210 SAMPLE CONTENTS : 500 UM [U-15N] HEAT SHOCK REMARK 210 PROTEIN 90(HTPG) M DOMAIN, 500 REMARK 210 UM [U-13C; U-15N; U-2H] HEAT REMARK 210 SHOCK PROTEIN 90(HTPG) M DOMAIN, REMARK 210 500 UM [U-100% 13C; U-100% 15N; REMARK 210 U-80% 2H] HEAT SHOCK PROTEIN REMARK 210 90(HTPG) M DOMAIN, 500 UM [U-100% REMARK 210 13C; U-100% 15N] DISORDERED REMARK 210 PROTEIN (D131D), 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D 1H- REMARK 210 13C NOESY; 3D HN(CO)CA; 3D 1H- REMARK 210 15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 850 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CYANA, NMRVIEW, NMRPIPE REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 203 REMARK 465 LYS A 204 REMARK 465 HIS A 205 REMARK 465 HIS A 206 REMARK 465 HIS A 207 REMARK 465 HIS A 208 REMARK 465 HIS A 209 REMARK 465 HIS A 210 REMARK 465 PRO A 211 REMARK 465 MET A 212 REMARK 465 SER A 213 REMARK 465 ASP A 214 REMARK 465 TYR A 215 REMARK 465 ASP A 216 REMARK 465 ILE A 217 REMARK 465 PRO A 218 REMARK 465 THR A 219 REMARK 465 THR A 220 REMARK 465 GLU A 221 REMARK 465 ASN A 222 REMARK 465 LEU A 223 REMARK 465 TYR A 224 REMARK 465 PHE A 225 REMARK 465 GLN A 226 REMARK 465 GLY A 227 REMARK 465 HIS A 228 REMARK 465 MET A 229 REMARK 465 LEU B 585 REMARK 465 GLU B 586 REMARK 465 GLY B 587 REMARK 465 SER B 588 REMARK 465 GLY B 589 REMARK 465 SER B 590 REMARK 465 GLY B 591 REMARK 465 SER B 592 REMARK 465 GLY B 593 REMARK 465 SER B 594 REMARK 465 GLY B 595 REMARK 465 SER B 596 REMARK 465 GLY B 597 REMARK 465 GLN B 598 REMARK 465 GLY B 599 REMARK 465 HIS B 600 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 232 101.56 -48.60 REMARK 500 1 ARG A 303 -8.04 74.42 REMARK 500 1 ASP A 367 108.73 -167.47 REMARK 500 1 GLU A 388 -73.21 -77.32 REMARK 500 1 ALA B 602 -151.17 -99.50 REMARK 500 1 ASP B 613 -70.02 -163.01 REMARK 500 1 LEU B 617 -84.42 55.31 REMARK 500 1 LYS B 620 108.98 68.74 REMARK 500 1 PRO B 623 84.58 -65.54 REMARK 500 1 PHE B 626 -78.69 -115.00 REMARK 500 1 ARG B 627 124.99 177.22 REMARK 500 1 LEU B 628 120.45 155.66 REMARK 500 1 THR B 633 -73.62 101.43 REMARK 500 1 LYS B 640 -94.58 -143.42 REMARK 500 1 LYS B 641 -69.28 64.44 REMARK 500 1 GLU B 644 -176.07 65.22 REMARK 500 1 GLU B 649 -83.60 56.10 REMARK 500 1 ALA B 652 127.54 65.34 REMARK 500 1 THR B 654 -81.17 47.63 REMARK 500 1 MET B 657 -84.36 -121.27 REMARK 500 1 VAL B 658 -10.14 -143.59 REMARK 500 1 ASN B 660 74.63 -101.49 REMARK 500 2 LYS A 294 -38.76 -151.70 REMARK 500 2 ASP A 367 106.86 -165.55 REMARK 500 2 GLU A 488 21.91 -79.86 REMARK 500 2 ALA B 609 -101.14 51.28 REMARK 500 2 ASP B 613 -72.07 -165.58 REMARK 500 2 VAL B 615 -49.94 75.96 REMARK 500 2 MET B 618 111.45 -34.18 REMARK 500 2 TYR B 619 58.68 -153.00 REMARK 500 2 LYS B 620 -169.64 -124.71 REMARK 500 2 PRO B 623 79.25 -67.62 REMARK 500 2 LEU B 628 108.85 -165.06 REMARK 500 2 LEU B 630 108.47 -38.32 REMARK 500 2 GLU B 635 -147.92 60.38 REMARK 500 2 THR B 636 -80.65 -57.84 REMARK 500 2 GLU B 644 -92.10 -157.52 REMARK 500 2 LYS B 645 -19.02 68.63 REMARK 500 2 ALA B 650 64.51 61.39 REMARK 500 2 SER B 651 92.55 -68.55 REMARK 500 2 ALA B 652 -53.65 -149.98 REMARK 500 2 PHE B 653 -88.31 -155.09 REMARK 500 2 THR B 654 165.10 62.76 REMARK 500 2 MET B 657 -65.39 68.99 REMARK 500 2 ASN B 660 87.85 -150.73 REMARK 500 3 LYS A 294 -29.02 -155.12 REMARK 500 3 ASP A 309 73.35 65.66 REMARK 500 3 GLU A 491 -71.33 -100.74 REMARK 500 3 THR B 603 -47.90 -177.76 REMARK 500 3 THR B 605 -89.46 56.57 REMARK 500 REMARK 500 THIS ENTRY HAS 532 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36581 RELATED DB: BMRB REMARK 900 THE STRUCTURE OF HTPG M DOMAIN IN COMPLEX WITH UNSTRUCTURED D131D REMARK 900 BINDING SITE A DBREF1 8K2S A 230 494 UNP A0A7A6VTW3_ECOLX DBREF2 8K2S A A0A7A6VTW3 230 494 DBREF 8K2S B 585 661 PDB 8K2S 8K2S 585 661 SEQADV 8K2S MET A 203 UNP A0A7A6VTW INITIATING METHIONINE SEQADV 8K2S LYS A 204 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 205 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 206 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 207 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 208 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 209 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 210 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S PRO A 211 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S MET A 212 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S SER A 213 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S ASP A 214 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S TYR A 215 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S ASP A 216 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S ILE A 217 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S PRO A 218 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S THR A 219 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S THR A 220 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S GLU A 221 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S ASN A 222 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S LEU A 223 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S TYR A 224 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S PHE A 225 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S GLN A 226 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S GLY A 227 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S HIS A 228 UNP A0A7A6VTW EXPRESSION TAG SEQADV 8K2S MET A 229 UNP A0A7A6VTW EXPRESSION TAG SEQRES 1 A 292 MET LYS HIS HIS HIS HIS HIS HIS PRO MET SER ASP TYR SEQRES 2 A 292 ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY HIS SEQRES 3 A 292 MET ALA GLN ALA LEU TRP THR ARG ASN LYS SER GLU ILE SEQRES 4 A 292 THR ASP GLU GLU TYR LYS GLU PHE TYR LYS HIS ILE ALA SEQRES 5 A 292 HIS ASP PHE ASN ASP PRO LEU THR TRP SER HIS ASN ARG SEQRES 6 A 292 VAL GLU GLY LYS GLN GLU TYR THR SER LEU LEU TYR ILE SEQRES 7 A 292 PRO SER GLN ALA PRO TRP ASP MET TRP ASN ARG ASP HIS SEQRES 8 A 292 LYS HIS GLY LEU LYS LEU TYR VAL GLN ARG VAL PHE ILE SEQRES 9 A 292 MET ASP ASP ALA GLU GLN PHE MET PRO ASN TYR LEU ARG SEQRES 10 A 292 PHE VAL ARG GLY LEU ILE ASP SER SER ASP LEU PRO LEU SEQRES 11 A 292 ASN VAL SER ARG GLU ILE LEU GLN ASP SER THR VAL THR SEQRES 12 A 292 ARG ASN LEU ARG ASN ALA LEU THR LYS ARG VAL LEU GLN SEQRES 13 A 292 MET LEU GLU LYS LEU ALA LYS ASP ASP ALA GLU LYS TYR SEQRES 14 A 292 GLN THR PHE TRP GLN GLN PHE GLY LEU VAL LEU LYS GLU SEQRES 15 A 292 GLY PRO ALA GLU ASP PHE ALA ASN GLN GLU ALA ILE ALA SEQRES 16 A 292 LYS LEU LEU ARG PHE ALA SER THR HIS THR ASP SER SER SEQRES 17 A 292 ALA GLN THR VAL SER LEU GLU ASP TYR VAL SER ARG MET SEQRES 18 A 292 LYS GLU GLY GLN GLU LYS ILE TYR TYR ILE THR ALA ASP SEQRES 19 A 292 SER TYR ALA ALA ALA LYS SER SER PRO HIS LEU GLU LEU SEQRES 20 A 292 LEU ARG LYS LYS GLY ILE GLU VAL LEU LEU LEU SER ASP SEQRES 21 A 292 ARG ILE ASP GLU TRP MET MET ASN TYR LEU THR GLU PHE SEQRES 22 A 292 ASP GLY LYS PRO PHE GLN SER VAL SER LYS VAL ASP GLU SEQRES 23 A 292 SER LEU GLU LYS LEU ALA SEQRES 1 B 77 LEU GLU GLY SER GLY SER GLY SER GLY SER GLY SER GLY SEQRES 2 B 77 GLN GLY HIS MET ALA THR SER THR LEU ILE LYS ALA ILE SEQRES 3 B 77 ASP GLY ASP THR VAL LYS LEU MET TYR LYS GLY GLN PRO SEQRES 4 B 77 MET THR PHE ARG LEU LEU LEU VAL ASP THR PRO GLU THR SEQRES 5 B 77 LYS HIS PRO LYS LYS GLY VAL GLU LYS TYR GLY PRO GLU SEQRES 6 B 77 ALA SER ALA PHE THR LYS LYS MET VAL GLU ASN ALA HELIX 1 AA1 THR A 242 HIS A 255 1 14 HELIX 2 AA2 PRO A 285 TRP A 289 5 5 HELIX 3 AA3 GLU A 311 MET A 314 5 4 HELIX 4 AA4 PRO A 315 ARG A 319 5 5 HELIX 5 AA5 SER A 335 SER A 342 1 8 HELIX 6 AA6 SER A 342 ASP A 367 1 26 HELIX 7 AA7 ASP A 367 GLY A 379 1 13 HELIX 8 AA8 LEU A 380 LEU A 382 5 3 HELIX 9 AA9 LYS A 383 ASP A 389 1 7 HELIX 10 AB1 ASN A 392 LYS A 398 1 7 HELIX 11 AB2 LEU A 416 ARG A 422 1 7 HELIX 12 AB3 SER A 437 SER A 443 1 7 HELIX 13 AB4 HIS A 446 GLY A 454 1 9 HELIX 14 AB5 ILE A 464 MET A 469 1 6 HELIX 15 AB6 GLU A 488 LEU A 493 1 6 SHEET 1 AA1 5 PRO A 260 VAL A 268 0 SHEET 2 AA1 5 TYR A 274 PRO A 281 -1 O ILE A 280 N LEU A 261 SHEET 3 AA1 5 ARG A 322 SER A 327 -1 O LEU A 324 N LEU A 277 SHEET 4 AA1 5 GLY A 296 VAL A 301 1 N TYR A 300 O ILE A 325 SHEET 5 AA1 5 VAL A 304 ALA A 310 -1 O ILE A 306 N LEU A 299 SHEET 1 AA2 6 VAL A 414 SER A 415 0 SHEET 2 AA2 6 ARG A 401 SER A 404 -1 N PHE A 402 O VAL A 414 SHEET 3 AA2 6 LEU A 458 LEU A 460 -1 O LEU A 459 N ALA A 403 SHEET 4 AA2 6 ILE A 430 THR A 434 1 N ILE A 433 O LEU A 460 SHEET 5 AA2 6 LYS A 478 SER A 482 1 O GLN A 481 N ILE A 430 SHEET 6 AA2 6 GLU A 474 PHE A 475 -1 N PHE A 475 O LYS A 478 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1