HEADER TRANSCRIPTION 28-JUL-23 8K81 TITLE SOLUTION NMR STRUCTURE OF ZF3 (FRAGMENT 346-396) FROM HUMAN TITLE 2 INSULINOMA-ASSOCIATED PROTEIN 1(INSM1) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULINOMA-ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 GENE: INSM1, IA1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS TRANSCRIPTIONR, REPRESSOR, ZINC-FINGERS, DNA-BINDING, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR X.L.HE,Y.H.YANG REVDAT 1 31-JUL-24 8K81 0 JRNL AUTH H.L.HE,Y.H.YANG JRNL TITL SOLUTION NMR STRUCTURE OF ZF3 (FRAGMENT 346-396) FROM HUMAN JRNL TITL 2 INSULINOMA-ASSOCIATED PROTEIN 1(INSM1) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8K81 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300039271. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT PA REMARK 210 SAMPLE CONTENTS : 0.69 MM [U-100% 13C; U-100% 15N] REMARK 210 ZF3 PROTEIN, 0.69 MM [U-100% 13C; REMARK 210 U-100% 15N] ZF3 PROTEIN, 0.69 REMARK 210 MM [U-100% 13C; U-100% 15N] ZF3 REMARK 210 PROTEIN, 0.69 MM [U-100% 13C; U- REMARK 210 100% 15N] ZF3 PROTEIN, 0.69 MM REMARK 210 [U-100% 13C; U-100% 15N] ZF3 REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 3D 1H-13C NOESY ALIPHATIC; 3D 1H- REMARK 210 13C NOESY AROMATIC; 3D 1H-15N REMARK 210 NOESY; 3D HNCO; 3D CBCA(CO)NH; REMARK 210 3D HBHA(CO)NH; 3D HNCACB REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AUTOASSIGN, CYANA, SPARKY, REMARK 210 NMRPIPE, TALOS+ REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 2 40.11 -174.16 REMARK 500 1 SER A 8 112.64 77.10 REMARK 500 1 GLU A 18 -79.13 56.74 REMARK 500 1 HIS A 26 5.40 81.84 REMARK 500 1 ALA A 50 71.94 -104.61 REMARK 500 2 PRO A 7 94.35 -67.23 REMARK 500 3 SER A 13 118.58 -166.31 REMARK 500 4 SER A 8 76.91 60.06 REMARK 500 4 PRO A 9 30.62 -88.23 REMARK 500 4 SER A 17 -71.04 -168.05 REMARK 500 4 ALA A 50 75.59 62.11 REMARK 500 5 SER A 13 80.98 47.43 REMARK 500 5 ALA A 28 -3.90 -58.50 REMARK 500 5 LYS A 29 95.62 -62.41 REMARK 500 6 SER A 15 -53.76 -121.07 REMARK 500 6 GLU A 18 -72.40 -79.06 REMARK 500 7 SER A 8 108.92 66.70 REMARK 500 7 GLU A 18 -86.14 -77.10 REMARK 500 7 HIS A 26 15.19 -141.35 REMARK 500 8 SER A 8 76.70 59.36 REMARK 500 9 PRO A 7 96.40 -47.95 REMARK 500 9 VAL A 12 94.62 -69.04 REMARK 500 10 ALA A 47 43.82 -83.42 REMARK 500 11 PRO A 7 89.32 -54.83 REMARK 500 11 SER A 17 43.67 -86.92 REMARK 500 11 GLU A 18 -65.05 -92.75 REMARK 500 11 HIS A 25 86.27 -65.11 REMARK 500 11 HIS A 26 -16.49 162.83 REMARK 500 11 LEU A 48 83.67 58.86 REMARK 500 11 GLN A 49 113.85 -162.56 REMARK 500 11 ALA A 50 173.92 65.73 REMARK 500 12 SER A 2 109.61 66.45 REMARK 500 12 ASP A 19 -73.37 -139.75 REMARK 500 12 HIS A 26 -28.89 175.54 REMARK 500 12 ALA A 47 98.06 -69.50 REMARK 500 13 SER A 2 -53.44 70.03 REMARK 500 13 SER A 13 88.66 -66.61 REMARK 500 13 ASP A 19 93.10 -66.95 REMARK 500 14 ASP A 5 99.68 -62.48 REMARK 500 14 PRO A 7 98.44 -59.97 REMARK 500 14 VAL A 12 85.74 56.08 REMARK 500 14 HIS A 45 99.75 -67.73 REMARK 500 14 LEU A 48 -52.64 -144.68 REMARK 500 15 PRO A 7 103.35 -53.35 REMARK 500 15 PRO A 9 80.07 -67.57 REMARK 500 16 HIS A 26 -8.70 84.36 REMARK 500 16 ALA A 50 140.41 -170.94 REMARK 500 17 SER A 2 89.23 -156.90 REMARK 500 17 GLU A 14 -76.74 -98.38 REMARK 500 17 SER A 15 -148.17 -174.39 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 101 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 CYS A 27 SG 111.7 REMARK 620 3 HIS A 40 NE2 104.2 108.9 REMARK 620 4 HIS A 44 NE2 108.2 109.8 113.9 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 36586 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF ZF3 (AA 346-396) FROM HUMAN INSULINOMA- REMARK 900 ASSOCIATED PROTEIN 1(INSM1) DBREF 8K81 A 1 51 PDB 8K81 8K81 1 51 SEQRES 1 A 51 GLY SER ASP ARG ASP THR PRO SER PRO GLY GLY VAL SER SEQRES 2 A 51 GLU SER GLY SER GLU ASP GLY LEU TYR GLU CYS HIS HIS SEQRES 3 A 51 CYS ALA LYS LYS PHE ARG ARG GLN ALA TYR LEU ARG LYS SEQRES 4 A 51 HIS LEU LEU ALA HIS HIS GLN ALA LEU GLN ALA LYS HET ZN A 101 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ HELIX 1 AA1 ARG A 33 ALA A 43 1 11 SHEET 1 AA1 2 TYR A 22 GLU A 23 0 SHEET 2 AA1 2 LYS A 30 PHE A 31 -1 O PHE A 31 N TYR A 22 LINK SG CYS A 24 ZN ZN A 101 1555 1555 2.31 LINK SG CYS A 27 ZN ZN A 101 1555 1555 2.32 LINK NE2 HIS A 40 ZN ZN A 101 1555 1555 2.06 LINK NE2 HIS A 44 ZN ZN A 101 1555 1555 2.06 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1