HEADER TRANSPORT PROTEIN 09-AUG-23 8KDN TITLE STRUCTURE OF LAT1-CD98HC IN COMPLEX WITH L-PHE, FOCUSED ON TMD COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4F2 CELL-SURFACE ANTIGEN HEAVY CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GLYCOPROTEIN, 4F2HC,4F2 HEAVY CHAIN ANTIGEN,LYMPHOCYTE COMPND 5 ACTIVATION ANTIGEN 4F2 LARGE SUBUNIT,SOLUTE CARRIER FAMILY 3 MEMBER COMPND 6 2; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: LARGE NEUTRAL AMINO ACIDS TRANSPORTER SMALL SUBUNIT 1; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: 4F2 LIGHT CHAIN,4F2LC,CD98 LIGHT CHAIN,INTEGRAL MEMBRANE COMPND 12 PROTEIN E16,L-TYPE AMINO ACID TRANSPORTER 1,HLAT1,SOLUTE CARRIER COMPND 13 FAMILY 7 MEMBER 5,Y+ SYSTEM CATIONIC AMINO ACID TRANSPORTER; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SLC3A2, MDU1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: SLC7A5, CD98LC, LAT1, MPE16; SOURCE 14 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS TRANSPORTER, AMINO ACID, COMPLEX, CANCER, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Y.LEE REVDAT 2 26-FEB-25 8KDN 1 JRNL REVDAT 1 12-FEB-25 8KDN 0 JRNL AUTH Y.LEE,C.JIN,R.OHGAKI,M.XU,S.OGASAWARA,R.WARSHAMANAGE, JRNL AUTH 2 K.YAMASHITA,G.MURSHUDOV,O.NUREKI,T.MURATA,Y.KANAI JRNL TITL STRUCTURAL BASIS OF ANTICANCER DRUG RECOGNITION AND AMINO JRNL TITL 2 ACID TRANSPORT BY LAT1. JRNL REF NAT COMMUN V. 16 1635 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 39952931 JRNL DOI 10.1038/S41467-025-56903-W REMARK 2 REMARK 2 RESOLUTION. 4.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.120 REMARK 3 NUMBER OF PARTICLES : 174905 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8KDN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1300040173. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LAT1-CD98HC-FAB170 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 GLU A 2 REMARK 465 LEU A 3 REMARK 465 GLN A 4 REMARK 465 PRO A 5 REMARK 465 PRO A 6 REMARK 465 GLU A 7 REMARK 465 ALA A 8 REMARK 465 SER A 9 REMARK 465 ILE A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 VAL A 13 REMARK 465 SER A 14 REMARK 465 ILE A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLN A 18 REMARK 465 LEU A 19 REMARK 465 PRO A 20 REMARK 465 GLY A 21 REMARK 465 SER A 22 REMARK 465 HIS A 23 REMARK 465 SER A 24 REMARK 465 GLU A 25 REMARK 465 ALA A 26 REMARK 465 GLY A 27 REMARK 465 VAL A 28 REMARK 465 GLN A 29 REMARK 465 GLY A 30 REMARK 465 LEU A 31 REMARK 465 SER A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 ASP A 35 REMARK 465 ASP A 36 REMARK 465 SER A 37 REMARK 465 GLU A 38 REMARK 465 LEU A 39 REMARK 465 GLY A 40 REMARK 465 SER A 41 REMARK 465 HIS A 42 REMARK 465 CYS A 43 REMARK 465 VAL A 44 REMARK 465 ALA A 45 REMARK 465 GLN A 46 REMARK 465 THR A 47 REMARK 465 GLY A 48 REMARK 465 LEU A 49 REMARK 465 GLU A 50 REMARK 465 LEU A 51 REMARK 465 LEU A 52 REMARK 465 ALA A 53 REMARK 465 SER A 54 REMARK 465 GLY A 55 REMARK 465 ASP A 56 REMARK 465 PRO A 57 REMARK 465 LEU A 58 REMARK 465 PRO A 59 REMARK 465 SER A 60 REMARK 465 ALA A 61 REMARK 465 SER A 62 REMARK 465 GLN A 63 REMARK 465 ASN A 64 REMARK 465 ALA A 65 REMARK 465 GLU A 66 REMARK 465 MET A 67 REMARK 465 ILE A 68 REMARK 465 GLU A 69 REMARK 465 THR A 70 REMARK 465 GLY A 71 REMARK 465 SER A 72 REMARK 465 ASP A 73 REMARK 465 CYS A 74 REMARK 465 VAL A 75 REMARK 465 THR A 76 REMARK 465 GLN A 77 REMARK 465 ALA A 78 REMARK 465 GLY A 79 REMARK 465 LEU A 80 REMARK 465 GLN A 81 REMARK 465 LEU A 82 REMARK 465 LEU A 83 REMARK 465 ALA A 84 REMARK 465 SER A 85 REMARK 465 SER A 86 REMARK 465 ASP A 87 REMARK 465 PRO A 88 REMARK 465 PRO A 89 REMARK 465 ALA A 90 REMARK 465 LEU A 91 REMARK 465 ALA A 92 REMARK 465 SER A 93 REMARK 465 LYS A 94 REMARK 465 ASN A 95 REMARK 465 ALA A 96 REMARK 465 GLU A 97 REMARK 465 VAL A 98 REMARK 465 THR A 99 REMARK 465 GLY A 100 REMARK 465 THR A 101 REMARK 465 MET A 102 REMARK 465 SER A 103 REMARK 465 GLN A 104 REMARK 465 ASP A 105 REMARK 465 THR A 106 REMARK 465 GLU A 107 REMARK 465 VAL A 108 REMARK 465 ASP A 109 REMARK 465 MET A 110 REMARK 465 LYS A 111 REMARK 465 GLU A 112 REMARK 465 VAL A 113 REMARK 465 GLU A 114 REMARK 465 LEU A 115 REMARK 465 ASN A 116 REMARK 465 GLU A 117 REMARK 465 LEU A 118 REMARK 465 GLU A 119 REMARK 465 PRO A 120 REMARK 465 GLU A 121 REMARK 465 LYS A 122 REMARK 465 GLN A 123 REMARK 465 PRO A 124 REMARK 465 MET A 125 REMARK 465 ASN A 126 REMARK 465 ALA A 127 REMARK 465 ALA A 128 REMARK 465 SER A 129 REMARK 465 GLY A 130 REMARK 465 ALA A 131 REMARK 465 ALA A 132 REMARK 465 MET A 133 REMARK 465 SER A 134 REMARK 465 LEU A 135 REMARK 465 ALA A 136 REMARK 465 GLY A 137 REMARK 465 ALA A 138 REMARK 465 GLU A 139 REMARK 465 LYS A 140 REMARK 465 ASN A 141 REMARK 465 GLY A 142 REMARK 465 LEU A 143 REMARK 465 VAL A 144 REMARK 465 LYS A 145 REMARK 465 ILE A 146 REMARK 465 LYS A 147 REMARK 465 VAL A 148 REMARK 465 ALA A 149 REMARK 465 GLU A 150 REMARK 465 ASP A 151 REMARK 465 GLU A 152 REMARK 465 ALA A 153 REMARK 465 GLU A 154 REMARK 465 ALA A 155 REMARK 465 ALA A 156 REMARK 465 ALA A 157 REMARK 465 ALA A 158 REMARK 465 ALA A 159 REMARK 465 LYS A 160 REMARK 465 PHE A 161 REMARK 465 PRO A 214 REMARK 465 ALA A 215 REMARK 465 GLN A 216 REMARK 465 LYS A 217 REMARK 465 TRP A 218 REMARK 465 TRP A 219 REMARK 465 HIS A 220 REMARK 465 THR A 221 REMARK 465 GLY A 222 REMARK 465 ALA A 223 REMARK 465 LEU A 224 REMARK 465 TYR A 225 REMARK 465 ARG A 226 REMARK 465 ILE A 227 REMARK 465 GLY A 228 REMARK 465 ASP A 229 REMARK 465 LEU A 230 REMARK 465 GLN A 231 REMARK 465 ALA A 232 REMARK 465 PHE A 233 REMARK 465 GLN A 234 REMARK 465 GLY A 235 REMARK 465 HIS A 236 REMARK 465 GLY A 237 REMARK 465 ALA A 238 REMARK 465 GLY A 239 REMARK 465 ASN A 240 REMARK 465 LEU A 241 REMARK 465 ALA A 242 REMARK 465 GLY A 243 REMARK 465 LEU A 244 REMARK 465 LYS A 245 REMARK 465 GLY A 246 REMARK 465 ARG A 247 REMARK 465 LEU A 248 REMARK 465 ASP A 249 REMARK 465 TYR A 250 REMARK 465 LEU A 251 REMARK 465 SER A 252 REMARK 465 SER A 253 REMARK 465 LEU A 254 REMARK 465 LYS A 255 REMARK 465 VAL A 256 REMARK 465 LYS A 257 REMARK 465 GLY A 258 REMARK 465 LEU A 259 REMARK 465 VAL A 260 REMARK 465 LEU A 261 REMARK 465 GLY A 262 REMARK 465 PRO A 263 REMARK 465 ILE A 264 REMARK 465 HIS A 265 REMARK 465 LYS A 266 REMARK 465 ASN A 267 REMARK 465 GLN A 268 REMARK 465 LYS A 269 REMARK 465 ASP A 270 REMARK 465 ASP A 271 REMARK 465 VAL A 272 REMARK 465 ALA A 273 REMARK 465 GLN A 274 REMARK 465 THR A 275 REMARK 465 ASP A 276 REMARK 465 LEU A 277 REMARK 465 LEU A 278 REMARK 465 GLN A 279 REMARK 465 ILE A 280 REMARK 465 ASP A 281 REMARK 465 PRO A 282 REMARK 465 ASN A 283 REMARK 465 PHE A 284 REMARK 465 GLY A 285 REMARK 465 SER A 286 REMARK 465 LYS A 287 REMARK 465 GLU A 288 REMARK 465 ASP A 289 REMARK 465 PHE A 290 REMARK 465 ASP A 291 REMARK 465 SER A 292 REMARK 465 LEU A 293 REMARK 465 LEU A 294 REMARK 465 GLN A 295 REMARK 465 SER A 296 REMARK 465 ALA A 297 REMARK 465 LYS A 298 REMARK 465 LYS A 299 REMARK 465 LYS A 300 REMARK 465 SER A 301 REMARK 465 ILE A 302 REMARK 465 ARG A 303 REMARK 465 VAL A 304 REMARK 465 ILE A 305 REMARK 465 LEU A 306 REMARK 465 ASP A 307 REMARK 465 LEU A 308 REMARK 465 THR A 309 REMARK 465 PRO A 310 REMARK 465 ASN A 311 REMARK 465 TYR A 312 REMARK 465 ARG A 313 REMARK 465 GLY A 314 REMARK 465 GLU A 315 REMARK 465 ASN A 316 REMARK 465 SER A 317 REMARK 465 TRP A 318 REMARK 465 PHE A 319 REMARK 465 SER A 320 REMARK 465 THR A 321 REMARK 465 GLN A 322 REMARK 465 VAL A 323 REMARK 465 ASP A 324 REMARK 465 THR A 325 REMARK 465 VAL A 326 REMARK 465 ALA A 327 REMARK 465 THR A 328 REMARK 465 LYS A 329 REMARK 465 VAL A 330 REMARK 465 LYS A 331 REMARK 465 ASP A 332 REMARK 465 ALA A 333 REMARK 465 LEU A 334 REMARK 465 GLU A 335 REMARK 465 PHE A 336 REMARK 465 TRP A 337 REMARK 465 LEU A 338 REMARK 465 GLN A 339 REMARK 465 ALA A 340 REMARK 465 GLY A 341 REMARK 465 VAL A 342 REMARK 465 ASP A 343 REMARK 465 GLY A 344 REMARK 465 PHE A 345 REMARK 465 GLN A 346 REMARK 465 VAL A 347 REMARK 465 ARG A 348 REMARK 465 ASP A 349 REMARK 465 ILE A 350 REMARK 465 GLU A 351 REMARK 465 ASN A 352 REMARK 465 LEU A 353 REMARK 465 LYS A 354 REMARK 465 ASP A 355 REMARK 465 ALA A 356 REMARK 465 SER A 357 REMARK 465 SER A 358 REMARK 465 PHE A 359 REMARK 465 LEU A 360 REMARK 465 ALA A 361 REMARK 465 GLU A 362 REMARK 465 TRP A 363 REMARK 465 GLN A 364 REMARK 465 ASN A 365 REMARK 465 ILE A 366 REMARK 465 THR A 367 REMARK 465 LYS A 368 REMARK 465 GLY A 369 REMARK 465 PHE A 370 REMARK 465 SER A 371 REMARK 465 GLU A 372 REMARK 465 ASP A 373 REMARK 465 ARG A 374 REMARK 465 LEU A 375 REMARK 465 LEU A 376 REMARK 465 ILE A 377 REMARK 465 ALA A 378 REMARK 465 GLY A 379 REMARK 465 THR A 380 REMARK 465 ASN A 381 REMARK 465 SER A 382 REMARK 465 SER A 383 REMARK 465 ASP A 384 REMARK 465 LEU A 385 REMARK 465 GLN A 386 REMARK 465 GLN A 387 REMARK 465 ILE A 388 REMARK 465 LEU A 389 REMARK 465 SER A 390 REMARK 465 LEU A 391 REMARK 465 LEU A 392 REMARK 465 GLU A 393 REMARK 465 SER A 394 REMARK 465 ASN A 395 REMARK 465 LYS A 396 REMARK 465 ASP A 397 REMARK 465 LEU A 398 REMARK 465 LEU A 399 REMARK 465 LEU A 400 REMARK 465 THR A 401 REMARK 465 SER A 402 REMARK 465 SER A 403 REMARK 465 TYR A 404 REMARK 465 LEU A 405 REMARK 465 SER A 406 REMARK 465 ASP A 407 REMARK 465 SER A 408 REMARK 465 GLY A 409 REMARK 465 SER A 410 REMARK 465 THR A 411 REMARK 465 GLY A 412 REMARK 465 GLU A 413 REMARK 465 HIS A 414 REMARK 465 THR A 415 REMARK 465 LYS A 416 REMARK 465 SER A 417 REMARK 465 LEU A 418 REMARK 465 VAL A 419 REMARK 465 THR A 420 REMARK 465 GLN A 421 REMARK 465 TYR A 422 REMARK 465 LEU A 423 REMARK 465 ASN A 424 REMARK 465 ALA A 425 REMARK 465 THR A 426 REMARK 465 GLY A 427 REMARK 465 ASN A 428 REMARK 465 ARG A 429 REMARK 465 TRP A 430 REMARK 465 CYS A 431 REMARK 465 SER A 432 REMARK 465 TRP A 433 REMARK 465 SER A 434 REMARK 465 LEU A 435 REMARK 465 SER A 436 REMARK 465 GLN A 437 REMARK 465 ALA A 438 REMARK 465 ARG A 439 REMARK 465 LEU A 440 REMARK 465 LEU A 441 REMARK 465 THR A 442 REMARK 465 SER A 443 REMARK 465 PHE A 444 REMARK 465 LEU A 445 REMARK 465 PRO A 446 REMARK 465 ALA A 447 REMARK 465 GLN A 448 REMARK 465 LEU A 449 REMARK 465 LEU A 450 REMARK 465 ARG A 451 REMARK 465 LEU A 452 REMARK 465 TYR A 453 REMARK 465 GLN A 454 REMARK 465 LEU A 455 REMARK 465 MET A 456 REMARK 465 LEU A 457 REMARK 465 PHE A 458 REMARK 465 THR A 459 REMARK 465 LEU A 460 REMARK 465 PRO A 461 REMARK 465 GLY A 462 REMARK 465 THR A 463 REMARK 465 PRO A 464 REMARK 465 VAL A 465 REMARK 465 PHE A 466 REMARK 465 SER A 467 REMARK 465 TYR A 468 REMARK 465 GLY A 469 REMARK 465 ASP A 470 REMARK 465 GLU A 471 REMARK 465 ILE A 472 REMARK 465 GLY A 473 REMARK 465 LEU A 474 REMARK 465 ASP A 475 REMARK 465 ALA A 476 REMARK 465 ALA A 477 REMARK 465 ALA A 478 REMARK 465 LEU A 479 REMARK 465 PRO A 480 REMARK 465 GLY A 481 REMARK 465 GLN A 482 REMARK 465 PRO A 483 REMARK 465 MET A 484 REMARK 465 GLU A 485 REMARK 465 ALA A 486 REMARK 465 PRO A 487 REMARK 465 VAL A 488 REMARK 465 MET A 489 REMARK 465 LEU A 490 REMARK 465 TRP A 491 REMARK 465 ASP A 492 REMARK 465 GLU A 493 REMARK 465 SER A 494 REMARK 465 SER A 495 REMARK 465 PHE A 496 REMARK 465 PRO A 497 REMARK 465 ASP A 498 REMARK 465 ILE A 499 REMARK 465 PRO A 500 REMARK 465 GLY A 501 REMARK 465 ALA A 502 REMARK 465 VAL A 503 REMARK 465 SER A 504 REMARK 465 ALA A 505 REMARK 465 ASN A 506 REMARK 465 MET A 507 REMARK 465 THR A 508 REMARK 465 VAL A 509 REMARK 465 LYS A 510 REMARK 465 GLY A 511 REMARK 465 GLN A 512 REMARK 465 SER A 513 REMARK 465 GLU A 514 REMARK 465 ASP A 515 REMARK 465 PRO A 516 REMARK 465 GLY A 517 REMARK 465 SER A 518 REMARK 465 LEU A 519 REMARK 465 LEU A 520 REMARK 465 SER A 521 REMARK 465 LEU A 522 REMARK 465 PHE A 523 REMARK 465 ARG A 524 REMARK 465 ARG A 525 REMARK 465 LEU A 526 REMARK 465 SER A 527 REMARK 465 ASP A 528 REMARK 465 GLN A 529 REMARK 465 ARG A 530 REMARK 465 SER A 531 REMARK 465 LYS A 532 REMARK 465 GLU A 533 REMARK 465 ARG A 534 REMARK 465 SER A 535 REMARK 465 LEU A 536 REMARK 465 LEU A 537 REMARK 465 HIS A 538 REMARK 465 GLY A 539 REMARK 465 ASP A 540 REMARK 465 PHE A 541 REMARK 465 HIS A 542 REMARK 465 ALA A 543 REMARK 465 PHE A 544 REMARK 465 SER A 545 REMARK 465 ALA A 546 REMARK 465 GLY A 547 REMARK 465 PRO A 548 REMARK 465 GLY A 549 REMARK 465 LEU A 550 REMARK 465 PHE A 551 REMARK 465 SER A 552 REMARK 465 TYR A 553 REMARK 465 ILE A 554 REMARK 465 ARG A 555 REMARK 465 HIS A 556 REMARK 465 TRP A 557 REMARK 465 ASP A 558 REMARK 465 GLN A 559 REMARK 465 ASN A 560 REMARK 465 GLU A 561 REMARK 465 ARG A 562 REMARK 465 PHE A 563 REMARK 465 LEU A 564 REMARK 465 VAL A 565 REMARK 465 VAL A 566 REMARK 465 LEU A 567 REMARK 465 ASN A 568 REMARK 465 PHE A 569 REMARK 465 GLY A 570 REMARK 465 ASP A 571 REMARK 465 VAL A 572 REMARK 465 GLY A 573 REMARK 465 LEU A 574 REMARK 465 SER A 575 REMARK 465 ALA A 576 REMARK 465 GLY A 577 REMARK 465 LEU A 578 REMARK 465 GLN A 579 REMARK 465 ALA A 580 REMARK 465 SER A 581 REMARK 465 ASP A 582 REMARK 465 LEU A 583 REMARK 465 PRO A 584 REMARK 465 ALA A 585 REMARK 465 SER A 586 REMARK 465 ALA A 587 REMARK 465 SER A 588 REMARK 465 LEU A 589 REMARK 465 PRO A 590 REMARK 465 ALA A 591 REMARK 465 LYS A 592 REMARK 465 ALA A 593 REMARK 465 ASP A 594 REMARK 465 LEU A 595 REMARK 465 LEU A 596 REMARK 465 LEU A 597 REMARK 465 SER A 598 REMARK 465 THR A 599 REMARK 465 GLN A 600 REMARK 465 PRO A 601 REMARK 465 GLY A 602 REMARK 465 ARG A 603 REMARK 465 GLU A 604 REMARK 465 GLU A 605 REMARK 465 GLY A 606 REMARK 465 SER A 607 REMARK 465 PRO A 608 REMARK 465 LEU A 609 REMARK 465 GLU A 610 REMARK 465 LEU A 611 REMARK 465 GLU A 612 REMARK 465 ARG A 613 REMARK 465 LEU A 614 REMARK 465 LYS A 615 REMARK 465 LEU A 616 REMARK 465 GLU A 617 REMARK 465 PRO A 618 REMARK 465 HIS A 619 REMARK 465 GLU A 620 REMARK 465 GLY A 621 REMARK 465 LEU A 622 REMARK 465 LEU A 623 REMARK 465 LEU A 624 REMARK 465 ARG A 625 REMARK 465 PHE A 626 REMARK 465 PRO A 627 REMARK 465 TYR A 628 REMARK 465 ALA A 629 REMARK 465 ALA A 630 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 ALA B 4 REMARK 465 GLY B 5 REMARK 465 PRO B 6 REMARK 465 LYS B 7 REMARK 465 ARG B 8 REMARK 465 ARG B 9 REMARK 465 ALA B 10 REMARK 465 LEU B 11 REMARK 465 ALA B 12 REMARK 465 ALA B 13 REMARK 465 PRO B 14 REMARK 465 ALA B 15 REMARK 465 ALA B 16 REMARK 465 GLU B 17 REMARK 465 GLU B 18 REMARK 465 LYS B 19 REMARK 465 GLU B 20 REMARK 465 GLU B 21 REMARK 465 ALA B 22 REMARK 465 ARG B 23 REMARK 465 GLU B 24 REMARK 465 LYS B 25 REMARK 465 MET B 26 REMARK 465 LEU B 27 REMARK 465 ALA B 28 REMARK 465 ALA B 29 REMARK 465 LYS B 30 REMARK 465 SER B 31 REMARK 465 ALA B 32 REMARK 465 ASP B 33 REMARK 465 GLY B 34 REMARK 465 SER B 35 REMARK 465 ALA B 36 REMARK 465 PRO B 37 REMARK 465 ALA B 38 REMARK 465 GLY B 39 REMARK 465 GLU B 40 REMARK 465 GLY B 41 REMARK 465 GLU B 42 REMARK 465 GLY B 43 REMARK 465 ASP B 223 REMARK 465 VAL B 224 REMARK 465 SER B 225 REMARK 465 ASN B 226 REMARK 465 LEU B 227 REMARK 465 ASP B 228 REMARK 465 PRO B 229 REMARK 465 ASN B 230 REMARK 465 PHE B 231 REMARK 465 SER B 232 REMARK 465 ASP B 508 REMARK 465 TYR B 509 REMARK 465 LYS B 510 REMARK 465 ASP B 511 REMARK 465 ASP B 512 REMARK 465 ASP B 513 REMARK 465 ASP B 514 REMARK 465 LYS B 515 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 49 -9.98 -140.61 REMARK 500 THR B 163 24.39 -146.91 REMARK 500 SER B 189 123.88 -174.29 REMARK 500 ALA B 310 72.85 -156.94 REMARK 500 PHE B 389 56.54 -97.34 REMARK 500 GLU B 457 37.16 -145.75 REMARK 500 GLN B 501 70.78 61.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 141 0.08 SIDE CHAIN REMARK 500 ARG B 348 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-37140 RELATED DB: EMDB REMARK 900 STRUCTURE OF LAT1-CD98HC IN COMPLEX WITH L-PHE, FOCUSED ON TMD DBREF 8KDN A 2 630 UNP P08195 4F2_HUMAN 2 630 DBREF 8KDN B 1 507 UNP Q01650 LAT1_HUMAN 1 507 SEQADV 8KDN GLY A 0 UNP P08195 EXPRESSION TAG SEQADV 8KDN SER A 1 UNP P08195 EXPRESSION TAG SEQADV 8KDN ASP B 508 UNP Q01650 EXPRESSION TAG SEQADV 8KDN TYR B 509 UNP Q01650 EXPRESSION TAG SEQADV 8KDN LYS B 510 UNP Q01650 EXPRESSION TAG SEQADV 8KDN ASP B 511 UNP Q01650 EXPRESSION TAG SEQADV 8KDN ASP B 512 UNP Q01650 EXPRESSION TAG SEQADV 8KDN ASP B 513 UNP Q01650 EXPRESSION TAG SEQADV 8KDN ASP B 514 UNP Q01650 EXPRESSION TAG SEQADV 8KDN LYS B 515 UNP Q01650 EXPRESSION TAG SEQRES 1 A 631 GLY SER GLU LEU GLN PRO PRO GLU ALA SER ILE ALA VAL SEQRES 2 A 631 VAL SER ILE PRO ARG GLN LEU PRO GLY SER HIS SER GLU SEQRES 3 A 631 ALA GLY VAL GLN GLY LEU SER ALA GLY ASP ASP SER GLU SEQRES 4 A 631 LEU GLY SER HIS CYS VAL ALA GLN THR GLY LEU GLU LEU SEQRES 5 A 631 LEU ALA SER GLY ASP PRO LEU PRO SER ALA SER GLN ASN SEQRES 6 A 631 ALA GLU MET ILE GLU THR GLY SER ASP CYS VAL THR GLN SEQRES 7 A 631 ALA GLY LEU GLN LEU LEU ALA SER SER ASP PRO PRO ALA SEQRES 8 A 631 LEU ALA SER LYS ASN ALA GLU VAL THR GLY THR MET SER SEQRES 9 A 631 GLN ASP THR GLU VAL ASP MET LYS GLU VAL GLU LEU ASN SEQRES 10 A 631 GLU LEU GLU PRO GLU LYS GLN PRO MET ASN ALA ALA SER SEQRES 11 A 631 GLY ALA ALA MET SER LEU ALA GLY ALA GLU LYS ASN GLY SEQRES 12 A 631 LEU VAL LYS ILE LYS VAL ALA GLU ASP GLU ALA GLU ALA SEQRES 13 A 631 ALA ALA ALA ALA LYS PHE THR GLY LEU SER LYS GLU GLU SEQRES 14 A 631 LEU LEU LYS VAL ALA GLY SER PRO GLY TRP VAL ARG THR SEQRES 15 A 631 ARG TRP ALA LEU LEU LEU LEU PHE TRP LEU GLY TRP LEU SEQRES 16 A 631 GLY MET LEU ALA GLY ALA VAL VAL ILE ILE VAL ARG ALA SEQRES 17 A 631 PRO ARG CYS ARG GLU LEU PRO ALA GLN LYS TRP TRP HIS SEQRES 18 A 631 THR GLY ALA LEU TYR ARG ILE GLY ASP LEU GLN ALA PHE SEQRES 19 A 631 GLN GLY HIS GLY ALA GLY ASN LEU ALA GLY LEU LYS GLY SEQRES 20 A 631 ARG LEU ASP TYR LEU SER SER LEU LYS VAL LYS GLY LEU SEQRES 21 A 631 VAL LEU GLY PRO ILE HIS LYS ASN GLN LYS ASP ASP VAL SEQRES 22 A 631 ALA GLN THR ASP LEU LEU GLN ILE ASP PRO ASN PHE GLY SEQRES 23 A 631 SER LYS GLU ASP PHE ASP SER LEU LEU GLN SER ALA LYS SEQRES 24 A 631 LYS LYS SER ILE ARG VAL ILE LEU ASP LEU THR PRO ASN SEQRES 25 A 631 TYR ARG GLY GLU ASN SER TRP PHE SER THR GLN VAL ASP SEQRES 26 A 631 THR VAL ALA THR LYS VAL LYS ASP ALA LEU GLU PHE TRP SEQRES 27 A 631 LEU GLN ALA GLY VAL ASP GLY PHE GLN VAL ARG ASP ILE SEQRES 28 A 631 GLU ASN LEU LYS ASP ALA SER SER PHE LEU ALA GLU TRP SEQRES 29 A 631 GLN ASN ILE THR LYS GLY PHE SER GLU ASP ARG LEU LEU SEQRES 30 A 631 ILE ALA GLY THR ASN SER SER ASP LEU GLN GLN ILE LEU SEQRES 31 A 631 SER LEU LEU GLU SER ASN LYS ASP LEU LEU LEU THR SER SEQRES 32 A 631 SER TYR LEU SER ASP SER GLY SER THR GLY GLU HIS THR SEQRES 33 A 631 LYS SER LEU VAL THR GLN TYR LEU ASN ALA THR GLY ASN SEQRES 34 A 631 ARG TRP CYS SER TRP SER LEU SER GLN ALA ARG LEU LEU SEQRES 35 A 631 THR SER PHE LEU PRO ALA GLN LEU LEU ARG LEU TYR GLN SEQRES 36 A 631 LEU MET LEU PHE THR LEU PRO GLY THR PRO VAL PHE SER SEQRES 37 A 631 TYR GLY ASP GLU ILE GLY LEU ASP ALA ALA ALA LEU PRO SEQRES 38 A 631 GLY GLN PRO MET GLU ALA PRO VAL MET LEU TRP ASP GLU SEQRES 39 A 631 SER SER PHE PRO ASP ILE PRO GLY ALA VAL SER ALA ASN SEQRES 40 A 631 MET THR VAL LYS GLY GLN SER GLU ASP PRO GLY SER LEU SEQRES 41 A 631 LEU SER LEU PHE ARG ARG LEU SER ASP GLN ARG SER LYS SEQRES 42 A 631 GLU ARG SER LEU LEU HIS GLY ASP PHE HIS ALA PHE SER SEQRES 43 A 631 ALA GLY PRO GLY LEU PHE SER TYR ILE ARG HIS TRP ASP SEQRES 44 A 631 GLN ASN GLU ARG PHE LEU VAL VAL LEU ASN PHE GLY ASP SEQRES 45 A 631 VAL GLY LEU SER ALA GLY LEU GLN ALA SER ASP LEU PRO SEQRES 46 A 631 ALA SER ALA SER LEU PRO ALA LYS ALA ASP LEU LEU LEU SEQRES 47 A 631 SER THR GLN PRO GLY ARG GLU GLU GLY SER PRO LEU GLU SEQRES 48 A 631 LEU GLU ARG LEU LYS LEU GLU PRO HIS GLU GLY LEU LEU SEQRES 49 A 631 LEU ARG PHE PRO TYR ALA ALA SEQRES 1 B 515 MET ALA GLY ALA GLY PRO LYS ARG ARG ALA LEU ALA ALA SEQRES 2 B 515 PRO ALA ALA GLU GLU LYS GLU GLU ALA ARG GLU LYS MET SEQRES 3 B 515 LEU ALA ALA LYS SER ALA ASP GLY SER ALA PRO ALA GLY SEQRES 4 B 515 GLU GLY GLU GLY VAL THR LEU GLN ARG ASN ILE THR LEU SEQRES 5 B 515 LEU ASN GLY VAL ALA ILE ILE VAL GLY THR ILE ILE GLY SEQRES 6 B 515 SER GLY ILE PHE VAL THR PRO THR GLY VAL LEU LYS GLU SEQRES 7 B 515 ALA GLY SER PRO GLY LEU ALA LEU VAL VAL TRP ALA ALA SEQRES 8 B 515 CYS GLY VAL PHE SER ILE VAL GLY ALA LEU CYS TYR ALA SEQRES 9 B 515 GLU LEU GLY THR THR ILE SER LYS SER GLY GLY ASP TYR SEQRES 10 B 515 ALA TYR MET LEU GLU VAL TYR GLY SER LEU PRO ALA PHE SEQRES 11 B 515 LEU LYS LEU TRP ILE GLU LEU LEU ILE ILE ARG PRO SER SEQRES 12 B 515 SER GLN TYR ILE VAL ALA LEU VAL PHE ALA THR TYR LEU SEQRES 13 B 515 LEU LYS PRO LEU PHE PRO THR CYS PRO VAL PRO GLU GLU SEQRES 14 B 515 ALA ALA LYS LEU VAL ALA CYS LEU CYS VAL LEU LEU LEU SEQRES 15 B 515 THR ALA VAL ASN CYS TYR SER VAL LYS ALA ALA THR ARG SEQRES 16 B 515 VAL GLN ASP ALA PHE ALA ALA ALA LYS LEU LEU ALA LEU SEQRES 17 B 515 ALA LEU ILE ILE LEU LEU GLY PHE VAL GLN ILE GLY LYS SEQRES 18 B 515 GLY ASP VAL SER ASN LEU ASP PRO ASN PHE SER PHE GLU SEQRES 19 B 515 GLY THR LYS LEU ASP VAL GLY ASN ILE VAL LEU ALA LEU SEQRES 20 B 515 TYR SER GLY LEU PHE ALA TYR GLY GLY TRP ASN TYR LEU SEQRES 21 B 515 ASN PHE VAL THR GLU GLU MET ILE ASN PRO TYR ARG ASN SEQRES 22 B 515 LEU PRO LEU ALA ILE ILE ILE SER LEU PRO ILE VAL THR SEQRES 23 B 515 LEU VAL TYR VAL LEU THR ASN LEU ALA TYR PHE THR THR SEQRES 24 B 515 LEU SER THR GLU GLN MET LEU SER SER GLU ALA VAL ALA SEQRES 25 B 515 VAL ASP PHE GLY ASN TYR HIS LEU GLY VAL MET SER TRP SEQRES 26 B 515 ILE ILE PRO VAL PHE VAL GLY LEU SER CYS PHE GLY SER SEQRES 27 B 515 VAL ASN GLY SER LEU PHE THR SER SER ARG LEU PHE PHE SEQRES 28 B 515 VAL GLY SER ARG GLU GLY HIS LEU PRO SER ILE LEU SER SEQRES 29 B 515 MET ILE HIS PRO GLN LEU LEU THR PRO VAL PRO SER LEU SEQRES 30 B 515 VAL PHE THR CYS VAL MET THR LEU LEU TYR ALA PHE SER SEQRES 31 B 515 LYS ASP ILE PHE SER VAL ILE ASN PHE PHE SER PHE PHE SEQRES 32 B 515 ASN TRP LEU CYS VAL ALA LEU ALA ILE ILE GLY MET ILE SEQRES 33 B 515 TRP LEU ARG HIS ARG LYS PRO GLU LEU GLU ARG PRO ILE SEQRES 34 B 515 LYS VAL ASN LEU ALA LEU PRO VAL PHE PHE ILE LEU ALA SEQRES 35 B 515 CYS LEU PHE LEU ILE ALA VAL SER PHE TRP LYS THR PRO SEQRES 36 B 515 VAL GLU CYS GLY ILE GLY PHE THR ILE ILE LEU SER GLY SEQRES 37 B 515 LEU PRO VAL TYR PHE PHE GLY VAL TRP TRP LYS ASN LYS SEQRES 38 B 515 PRO LYS TRP LEU LEU GLN GLY ILE PHE SER THR THR VAL SEQRES 39 B 515 LEU CYS GLN LYS LEU MET GLN VAL VAL PRO GLN GLU THR SEQRES 40 B 515 ASP TYR LYS ASP ASP ASP ASP LYS HET PHE B 601 12 HETNAM PHE PHENYLALANINE FORMUL 3 PHE C9 H11 N O2 HELIX 1 AA1 SER A 165 ALA A 173 1 9 HELIX 2 AA2 SER A 175 ALA A 207 1 33 HELIX 3 AA3 THR B 51 GLY B 65 1 15 HELIX 4 AA4 SER B 66 THR B 71 1 6 HELIX 5 AA5 PRO B 72 GLY B 80 1 9 HELIX 6 AA6 SER B 81 ILE B 110 1 30 HELIX 7 AA7 GLY B 114 GLY B 125 1 12 HELIX 8 AA8 GLY B 125 ILE B 139 1 15 HELIX 9 AA9 ILE B 139 LEU B 157 1 19 HELIX 10 AB1 LYS B 158 PHE B 161 5 4 HELIX 11 AB2 PRO B 167 TYR B 188 1 22 HELIX 12 AB3 SER B 189 LYS B 221 1 33 HELIX 13 AB4 ASP B 239 GLY B 255 1 17 HELIX 14 AB5 GLY B 256 MET B 267 5 12 HELIX 15 AB6 ASN B 269 LEU B 300 1 32 HELIX 16 AB7 SER B 301 SER B 308 1 8 HELIX 17 AB8 ALA B 310 LEU B 320 1 11 HELIX 18 AB9 TRP B 325 GLU B 356 1 32 HELIX 19 AC1 PRO B 360 MET B 365 5 6 HELIX 20 AC2 PRO B 373 TYR B 387 1 15 HELIX 21 AC3 ALA B 388 SER B 390 5 3 HELIX 22 AC4 ILE B 393 LYS B 422 1 30 HELIX 23 AC5 LEU B 433 THR B 454 1 22 HELIX 24 AC6 GLU B 457 SER B 467 1 11 HELIX 25 AC7 SER B 467 VAL B 476 1 10 HELIX 26 AC8 PRO B 482 GLN B 501 1 20 SSBOND 1 CYS A 210 CYS B 164 1555 1555 2.11 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000