HEADER LIGASE 14-MAR-23 8OF7 TITLE CYC15 DIELS ALDERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHS FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. NL15-2K; SOURCE 3 ORGANISM_TAXID: 376149; SOURCE 4 GENE: SNL152K_10620; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PET29B(+) KEYWDS DIELS ALDERASE, CYCLASE, DIMER, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR C.R.BACK,R.W.L.BARRINGER,K.ZORN,M.MANZO-RUIZ,P.R.RACE REVDAT 3 19-JUN-24 8OF7 1 REMARK REVDAT 2 26-JUL-23 8OF7 1 JRNL REVDAT 1 21-JUN-23 8OF7 0 JRNL AUTH K.ZORN,C.R.BACK,R.BARRINGER,V.CHADIMOVA,M.MANZO-RUIZ, JRNL AUTH 2 S.Z.MBATHA,J.C.MOBAREC,S.E.WILLIAMS,M.W.VAN DER KAMP, JRNL AUTH 3 P.R.RACE,C.L.WILLIS,M.A.HAYES JRNL TITL INTERROGATION OF AN ENZYME LIBRARY REVEALS THE CATALYTIC JRNL TITL 2 PLASTICITY OF NATURALLY EVOLVED [4+2] CYCLASES. JRNL REF CHEMBIOCHEM V. 24 00382 2023 JRNL REFN ESSN 1439-7633 JRNL PMID 37305956 JRNL DOI 10.1002/CBIC.202300382 REMARK 2 REMARK 2 RESOLUTION. 1.66 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.66 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 44470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2349 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.66 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.70 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.5060 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.5070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2016 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 82 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.22000 REMARK 3 B22 (A**2) : 3.22000 REMARK 3 B33 (A**2) : -6.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.081 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.316 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2134 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2057 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2845 ; 1.615 ; 1.655 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4724 ; 0.536 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 253 ; 7.119 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 14 ; 7.714 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 362 ;17.084 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 316 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2392 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 464 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1045 ; 3.895 ; 4.014 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1044 ; 3.887 ; 4.010 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1287 ; 5.242 ; 7.118 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1288 ; 5.240 ; 7.119 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1089 ; 5.772 ; 4.844 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1089 ; 5.756 ; 4.844 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1559 ; 8.136 ; 8.485 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2228 ;10.583 ;42.280 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2226 ;10.589 ;42.260 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 3905 REMARK 3 ORIGIN FOR THE GROUP (A): -27.7933 -15.1197 -10.2128 REMARK 3 T TENSOR REMARK 3 T11: 0.0335 T22: 0.0132 REMARK 3 T33: 0.1870 T12: -0.0068 REMARK 3 T13: -0.0206 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 2.2101 L22: 0.8593 REMARK 3 L33: 2.9799 L12: -0.1839 REMARK 3 L13: 0.4818 L23: -0.1577 REMARK 3 S TENSOR REMARK 3 S11: -0.0820 S12: 0.0199 S13: 0.1545 REMARK 3 S21: -0.0179 S22: 0.0345 S23: -0.0427 REMARK 3 S31: -0.2630 S32: -0.0505 S33: 0.0475 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 9 B 2301 REMARK 3 ORIGIN FOR THE GROUP (A): -32.4043 -32.5645 -21.3642 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.1305 REMARK 3 T33: 0.2767 T12: -0.0958 REMARK 3 T13: -0.0342 T23: -0.0440 REMARK 3 L TENSOR REMARK 3 L11: 1.8379 L22: 2.8132 REMARK 3 L33: 2.6848 L12: -0.3951 REMARK 3 L13: 0.5178 L23: -0.0275 REMARK 3 S TENSOR REMARK 3 S11: -0.0216 S12: 0.3275 S13: -0.3678 REMARK 3 S21: -0.2049 S22: -0.0222 S23: 0.2611 REMARK 3 S31: 0.4769 S32: -0.3038 S33: 0.0438 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8OF7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292128807. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-APR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46918 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.660 REMARK 200 RESOLUTION RANGE LOW (A) : 46.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 77.20 REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM GLUTAMATE MONOHYDRATE, 100 MM REMARK 280 DL-ALANINE, 100 MM GLYCINE, 100 MM DL-LYSINE MONOHYDROCHLORIDE, REMARK 280 100 MM DL-SERINE, 100 MM IMIDAZOLE, 100 MM MES MONOHYDRATE (ACID) REMARK 280 , 20 % (V/V) ETHYLENE GLYCOL, 10 % (W/V) PEG 8000, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.07000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.57000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.57000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.03500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.57000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.57000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 135.10500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.57000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.57000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.03500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.57000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.57000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 135.10500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 90.07000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 THR A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 HIS A 152 REMARK 465 HIS A 153 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASP B 3 REMARK 465 THR B 4 REMARK 465 THR B 5 REMARK 465 THR B 6 REMARK 465 ALA B 7 REMARK 465 ASN B 8 REMARK 465 SER B 27 REMARK 465 GLY B 28 REMARK 465 SER B 29 REMARK 465 ILE B 30 REMARK 465 GLU B 31 REMARK 465 GLY B 32 REMARK 465 PHE B 33 REMARK 465 GLY B 34 REMARK 465 PRO B 35 REMARK 465 ALA B 65 REMARK 465 ASP B 66 REMARK 465 PRO B 67 REMARK 465 GLU B 68 REMARK 465 SER B 69 REMARK 465 GLY B 70 REMARK 465 HIS B 71 REMARK 465 GLU B 130 REMARK 465 ASP B 131 REMARK 465 LEU B 146 REMARK 465 GLU B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 69 -36.76 -155.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG B 81 0.13 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 8OF7 A 1 145 UNP A0A401MXE6_9ACTN DBREF2 8OF7 A A0A401MXE6 1 145 DBREF1 8OF7 B 1 145 UNP A0A401MXE6_9ACTN DBREF2 8OF7 B A0A401MXE6 1 145 SEQADV 8OF7 LEU A 146 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 GLU A 147 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 148 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 149 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 150 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 151 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 152 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS A 153 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 LEU B 146 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 GLU B 147 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 148 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 149 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 150 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 151 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 152 UNP A0A401MXE EXPRESSION TAG SEQADV 8OF7 HIS B 153 UNP A0A401MXE EXPRESSION TAG SEQRES 1 A 153 MET GLY ASP THR THR THR ALA ASN ASP VAL VAL THR VAL SEQRES 2 A 153 GLU LEU VAL GLU LYS VAL THR LYS LYS ASP LEU ASN GLU SEQRES 3 A 153 SER GLY SER ILE GLU GLY PHE GLY PRO GLY MET MET ALA SEQRES 4 A 153 THR TYR TRP CYS ASP VAL PHE ASP THR GLU GLY LYS HIS SEQRES 5 A 153 ILE GLY THR THR VAL GLY CYS MET ASP ILE LEU TYR ALA SEQRES 6 A 153 ASP PRO GLU SER GLY HIS LEU VAL GLU HIS VAL ALA GLU SEQRES 7 A 153 GLN ILE ARG LEU PRO ASP GLY THR ILE MET ALA TRP GLY SEQRES 8 A 153 THR MET ASN ARG SER ASP VAL LEU ALA GLN LYS TRP ILE SEQRES 9 A 153 THR TYR ARG CYS GLN GLY THR SER GLY ARG TYR ALA GLY SEQRES 10 A 153 LEU VAL GLY THR ARG THR TRP ARG ILE GLN SER LEU GLU SEQRES 11 A 153 ASP GLU SER TYR PRO ILE VAL ALA LYS MET GLU LEU ARG SEQRES 12 A 153 GLY ALA LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 153 MET GLY ASP THR THR THR ALA ASN ASP VAL VAL THR VAL SEQRES 2 B 153 GLU LEU VAL GLU LYS VAL THR LYS LYS ASP LEU ASN GLU SEQRES 3 B 153 SER GLY SER ILE GLU GLY PHE GLY PRO GLY MET MET ALA SEQRES 4 B 153 THR TYR TRP CYS ASP VAL PHE ASP THR GLU GLY LYS HIS SEQRES 5 B 153 ILE GLY THR THR VAL GLY CYS MET ASP ILE LEU TYR ALA SEQRES 6 B 153 ASP PRO GLU SER GLY HIS LEU VAL GLU HIS VAL ALA GLU SEQRES 7 B 153 GLN ILE ARG LEU PRO ASP GLY THR ILE MET ALA TRP GLY SEQRES 8 B 153 THR MET ASN ARG SER ASP VAL LEU ALA GLN LYS TRP ILE SEQRES 9 B 153 THR TYR ARG CYS GLN GLY THR SER GLY ARG TYR ALA GLY SEQRES 10 B 153 LEU VAL GLY THR ARG THR TRP ARG ILE GLN SER LEU GLU SEQRES 11 B 153 ASP GLU SER TYR PRO ILE VAL ALA LYS MET GLU LEU ARG SEQRES 12 B 153 GLY ALA LEU GLU HIS HIS HIS HIS HIS HIS HET IMD A 201 5 HET PEG A 202 7 HET EDO A 203 4 HET GLY A 204 5 HET IMD A 205 5 HET PEG A 206 7 HET GLY A 207 5 HET EDO A 208 4 HET GLY A 209 5 HET SER A 210 7 HET EDO A 211 4 HET EDO A 212 4 HET EDO A 213 4 HET GOL A 214 6 HET EDO B 201 4 HET GLY B 202 5 HET EDO B 203 4 HET EDO B 204 4 HET EDO B 205 4 HET EDO B 206 4 HET GLY B 207 5 HETNAM IMD IMIDAZOLE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETNAM GLY GLYCINE HETNAM SER SERINE HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 IMD 2(C3 H5 N2 1+) FORMUL 4 PEG 2(C4 H10 O3) FORMUL 5 EDO 10(C2 H6 O2) FORMUL 6 GLY 5(C2 H5 N O2) FORMUL 12 SER C3 H7 N O3 FORMUL 16 GOL C3 H8 O3 FORMUL 24 HOH *82(H2 O) HELIX 1 AA1 ARG A 95 ALA A 100 1 6 HELIX 2 AA2 ARG B 95 ALA B 100 1 6 SHEET 1 AA1 9 VAL A 11 LEU A 24 0 SHEET 2 AA1 9 MET A 38 PHE A 46 -1 O PHE A 46 N VAL A 16 SHEET 3 AA1 9 HIS A 52 ALA A 65 -1 O ILE A 53 N VAL A 45 SHEET 4 AA1 9 LEU A 72 LEU A 82 -1 O VAL A 73 N LEU A 63 SHEET 5 AA1 9 GLY A 85 ASN A 94 -1 O ILE A 87 N ILE A 80 SHEET 6 AA1 9 ILE A 104 GLY A 113 -1 O GLN A 109 N MET A 88 SHEET 7 AA1 9 LEU A 118 ILE A 126 -1 O TRP A 124 N ILE A 104 SHEET 8 AA1 9 ILE A 136 GLY A 144 -1 O ARG A 143 N VAL A 119 SHEET 9 AA1 9 VAL A 11 LEU A 24 -1 N VAL A 11 O LEU A 142 SHEET 1 AA2 9 VAL B 11 LEU B 24 0 SHEET 2 AA2 9 MET B 38 PHE B 46 -1 O PHE B 46 N VAL B 16 SHEET 3 AA2 9 HIS B 52 ILE B 62 -1 O ILE B 53 N VAL B 45 SHEET 4 AA2 9 VAL B 73 LEU B 82 -1 O ARG B 81 N THR B 55 SHEET 5 AA2 9 GLY B 85 ASN B 94 -1 O MET B 93 N GLU B 74 SHEET 6 AA2 9 ILE B 104 GLY B 113 -1 O THR B 111 N THR B 86 SHEET 7 AA2 9 LEU B 118 ILE B 126 -1 O ARG B 122 N TYR B 106 SHEET 8 AA2 9 ILE B 136 GLY B 144 -1 O LYS B 139 N THR B 123 SHEET 9 AA2 9 VAL B 11 LEU B 24 -1 N VAL B 11 O LEU B 142 CRYST1 65.140 65.140 180.140 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015352 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015352 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005551 0.00000