HEADER MEMBRANE PROTEIN 27-MAR-23 8OK5 TITLE VARIANT SURFACE GLYCOPROTEIN VSG11 MONOMER WITH IODINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIANT SURFACE GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 3 ORGANISM_TAXID: 5702; SOURCE 4 GENE: TB427.BES126.15; SOURCE 5 EXPRESSION_SYSTEM: TRYPANOSOMA BRUCEI BRUCEI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5702 KEYWDS VARIANT SURFACE GLYCOPROTEIN SURAMIN TRYPANOSOMIASIS DRUG RESISTANCE KEYWDS 2 GLYCOSYLATION, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.P.ZEELEN,C.E.STEBBINS,F.ARESTA-BRANCO REVDAT 2 13-NOV-24 8OK5 1 REMARK REVDAT 1 13-SEP-23 8OK5 0 JRNL AUTH S.DAKOVIC,J.P.ZEELEN,A.GKEKA,M.CHANDRA,M.VAN STRAATEN, JRNL AUTH 2 K.FOTI,J.ZHONG,E.P.VLACHOU,F.ARESTA-BRANCO,J.P.VERDI, JRNL AUTH 3 F.N.PAPAVASILIOU,C.E.STEBBINS JRNL TITL A STRUCTURAL CLASSIFICATION OF THE VARIANT SURFACE JRNL TITL 2 GLYCOPROTEINS OF THE AFRICAN TRYPANOSOMEY. JRNL REF PLOS NEGL TROP DIS V. 17 11621 2023 JRNL REFN ESSN 1935-2735 JRNL PMID 37656766 JRNL DOI 10.1371/JOURNAL.PNTD.0011621 REMARK 2 REMARK 2 RESOLUTION. 1.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2-4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 93126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4657 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2600 - 3.9400 1.00 3179 168 0.2109 0.2339 REMARK 3 2 3.9400 - 3.1300 1.00 3026 159 0.1816 0.1980 REMARK 3 3 3.1300 - 2.7300 1.00 3015 159 0.2019 0.2193 REMARK 3 4 2.7300 - 2.4800 1.00 2991 157 0.2073 0.2389 REMARK 3 5 2.4800 - 2.3000 1.00 2980 157 0.1960 0.2337 REMARK 3 6 2.3000 - 2.1700 1.00 2968 156 0.1850 0.2009 REMARK 3 7 2.1700 - 2.0600 1.00 2972 157 0.1834 0.2039 REMARK 3 8 2.0600 - 1.9700 1.00 2942 155 0.1843 0.2256 REMARK 3 9 1.9700 - 1.8900 1.00 2934 154 0.1936 0.2420 REMARK 3 10 1.8900 - 1.8300 1.00 2968 156 0.2029 0.2344 REMARK 3 11 1.8300 - 1.7700 1.00 2949 155 0.2016 0.2087 REMARK 3 12 1.7700 - 1.7200 1.00 2925 154 0.2055 0.2303 REMARK 3 13 1.7200 - 1.6800 1.00 2924 154 0.2054 0.2160 REMARK 3 14 1.6800 - 1.6300 1.00 2946 155 0.2097 0.2426 REMARK 3 15 1.6300 - 1.6000 1.00 2971 157 0.2003 0.2409 REMARK 3 16 1.6000 - 1.5600 1.00 2924 154 0.2161 0.2083 REMARK 3 17 1.5600 - 1.5300 1.00 2932 154 0.2133 0.2337 REMARK 3 18 1.5300 - 1.5000 1.00 2920 154 0.2148 0.2488 REMARK 3 19 1.5000 - 1.4800 1.00 2898 152 0.2320 0.2717 REMARK 3 20 1.4800 - 1.4500 1.00 2920 154 0.2346 0.2877 REMARK 3 21 1.4500 - 1.4300 1.00 2961 156 0.2408 0.2717 REMARK 3 22 1.4300 - 1.4100 1.00 2937 154 0.2578 0.2889 REMARK 3 23 1.4100 - 1.3900 1.00 2903 153 0.2588 0.2994 REMARK 3 24 1.3900 - 1.3700 1.00 2932 154 0.2608 0.2499 REMARK 3 25 1.3700 - 1.3500 1.00 2896 153 0.2724 0.2916 REMARK 3 26 1.3500 - 1.3300 1.00 2917 153 0.2731 0.3081 REMARK 3 27 1.3300 - 1.3100 1.00 2935 155 0.2868 0.2876 REMARK 3 28 1.3100 - 1.3000 1.00 2919 153 0.2928 0.2928 REMARK 3 29 1.3000 - 1.2800 1.00 2905 153 0.2897 0.2786 REMARK 3 30 1.2800 - 1.2700 0.99 2880 152 0.3005 0.3047 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.157 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.448 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2916 REMARK 3 ANGLE : 1.234 3978 REMARK 3 CHIRALITY : 0.077 487 REMARK 3 PLANARITY : 0.011 513 REMARK 3 DIHEDRAL : 14.268 1084 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8OK5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292128346. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93126 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.270 REMARK 200 RESOLUTION RANGE LOW (A) : 41.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.270 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: HEXAGONAL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M NAKTARTRATE 100 MM TRIS/HCL, PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 23180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 42620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 37.71300 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 65.32083 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -37.71300 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 65.32083 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 I IOD A 502 LIES ON A SPECIAL POSITION. REMARK 375 I IOD A 518 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 725 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 917 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 988 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 995 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1007 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1027 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1050 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 VAL A 5 REMARK 465 LEU A 6 REMARK 465 ALA A 7 REMARK 465 ALA A 8 REMARK 465 LEU A 9 REMARK 465 LEU A 10 REMARK 465 SER A 11 REMARK 465 VAL A 12 REMARK 465 SER A 13 REMARK 465 ILE A 14 REMARK 465 MET A 15 REMARK 465 LEU A 16 REMARK 465 VAL A 17 REMARK 465 GLN A 18 REMARK 465 LEU A 19 REMARK 465 ARG A 20 REMARK 465 ALA A 21 REMARK 465 GLU A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 390 REMARK 465 SER A 391 REMARK 465 VAL A 392 REMARK 465 GLY A 393 REMARK 465 THR A 394 REMARK 465 ARG A 395 REMARK 465 HIS A 396 REMARK 465 LEU A 397 REMARK 465 GLU A 398 REMARK 465 THR A 399 REMARK 465 THR A 400 REMARK 465 LYS A 401 REMARK 465 GLN A 402 REMARK 465 ARG A 403 REMARK 465 VAL A 404 REMARK 465 SER A 405 REMARK 465 ASN A 406 REMARK 465 GLU A 407 REMARK 465 GLN A 408 REMARK 465 GLY A 409 REMARK 465 LYS A 410 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 ARG A 142 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 159 CG CD OE1 NE2 REMARK 470 ASP A 160 CG OD1 OD2 REMARK 470 GLU A 174 CG CD OE1 OE2 REMARK 470 LYS A 282 CG CD CE NZ REMARK 470 LYS A 342 CG CD CE NZ REMARK 470 LYS A 359 CG CD CE NZ REMARK 470 ARG A 362 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 365 CG CD OE1 OE2 REMARK 470 LYS A 366 CG CD CE NZ REMARK 470 LYS A 369 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 53 -156.17 58.56 REMARK 500 ASP A 192 -176.51 -68.49 REMARK 500 THR A 207 -66.53 83.93 REMARK 500 ASP A 242 -95.58 -144.38 REMARK 500 ALA A 249 -104.20 -98.85 REMARK 500 THR A 316 -65.76 73.06 REMARK 500 CYS A 318 55.33 -92.83 REMARK 500 SER A 324 -76.57 -109.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1046 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH A1047 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A1050 DISTANCE = 6.46 ANGSTROMS DBREF 8OK5 A 1 410 UNP B3GVS7 B3GVS7_TRYBB 1 410 SEQRES 1 A 410 MET THR SER SER VAL LEU ALA ALA LEU LEU SER VAL SER SEQRES 2 A 410 ILE MET LEU VAL GLN LEU ARG ALA GLU ALA ASN ILE GLY SEQRES 3 A 410 THR GLY ASP ASN VAL LEU HIS ARG ALA ALA LEU CYS GLY SEQRES 4 A 410 ILE ILE GLU LEU ALA GLY LYS ARG ALA LYS LEU GLU THR SEQRES 5 A 410 ALA LEU PRO ASN PHE GLN ASN GLU LEU ASN SER ILE LEU SEQRES 6 A 410 GLU LEU ASN MET THR ALA ALA GLU PRO THR TRP LEU ASP SEQRES 7 A 410 GLN PHE ARG ASP LYS ASP ASP ARG SER LYS PRO ARG ASP SEQRES 8 A 410 LEU THR LYS GLN PRO LEU PRO LYS ASP THR ASN TRP ALA SEQRES 9 A 410 ASP HIS TRP THR ALA TRP ALA LYS ALA ALA LEU PRO LEU SEQRES 10 A 410 LEU ASN ASP GLU THR HIS GLN ALA LYS LEU LYS GLU TYR SEQRES 11 A 410 LYS LEU ALA GLY LEU GLN PRO GLU LYS LEU GLU ARG ALA SEQRES 12 A 410 ARG ASN THR ILE ARG ARG LEU THR ALA GLU ALA VAL ALA SEQRES 13 A 410 LYS ALA GLN ASP PRO THR VAL ALA GLU SER THR ALA ASP SEQRES 14 A 410 LEU THR THR GLU GLU ASP LEU GLN LYS GLN ILE ASN GLN SEQRES 15 A 410 ALA VAL TYR SER LYS ASP THR GLU PRO ASP ASP ASP PHE SEQRES 16 A 410 ASN GLY TYR THR ALA PHE GLU GLY LYS ALA SER THR ASN SEQRES 17 A 410 ARG GLN THR ILE CYS GLY SER ALA VAL ALA GLY SER LYS SEQRES 18 A 410 ALA THR ASN ALA MET ASP ALA LEU PHE CYS VAL CYS ALA SEQRES 19 A 410 ASP ASP ARG THR ASN GLY ALA ASP ALA GLY LYS ALA CYS SEQRES 20 A 410 VAL ALA GLY THR ALA PRO GLY THR GLY TRP ASN PRO GLY SEQRES 21 A 410 VAL THR ALA THR PRO THR GLY THR MET LEU GLN LYS VAL SEQRES 22 A 410 ARG LYS LEU CYS ASN THR HIS GLY LYS THR THR LEU SER SEQRES 23 A 410 ALA ALA ALA ILE GLU GLY ARG LEU THR ALA VAL GLY ASN SEQRES 24 A 410 LEU LEU THR ARG GLY SER ALA THR SER ILE LEU GLY SER SEQRES 25 A 410 PHE LEU ALA THR ASP CYS SER GLY ASP GLN GLY SER GLY SEQRES 26 A 410 MET CYS VAL ALA TYR THR GLU VAL THR ASP ALA LYS GLY SEQRES 27 A 410 THR PRO THR LYS ASP ILE PRO TRP MET GLN LYS LEU ASP SEQRES 28 A 410 SER VAL ARG ILE LYS LEU GLN LYS HIS GLU ARG ALA VAL SEQRES 29 A 410 GLU LYS LEU GLY LYS PRO GLN HIS ASP LEU LYS THR ILE SEQRES 30 A 410 LEU THR LEU ALA LYS ASP PRO ALA TYR LEU GLN LEU ALA SEQRES 31 A 410 SER VAL GLY THR ARG HIS LEU GLU THR THR LYS GLN ARG SEQRES 32 A 410 VAL SER ASN GLU GLN GLY LYS HET NAG B 1 26 HET NAG B 2 26 HET BMA B 3 19 HET MAN B 4 20 HET MAN B 5 21 HET MAN B 6 21 HET GLC A 501 21 HET IOD A 502 1 HET IOD A 503 1 HET IOD A 504 1 HET IOD A 505 1 HET IOD A 506 1 HET IOD A 507 1 HET IOD A 508 1 HET IOD A 509 1 HET IOD A 510 1 HET IOD A 511 1 HET IOD A 512 1 HET IOD A 513 1 HET IOD A 514 1 HET IOD A 515 1 HET IOD A 516 1 HET IOD A 517 1 HET IOD A 518 1 HET IOD A 519 1 HET IOD A 520 1 HET IOD A 521 1 HET IOD A 522 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM IOD IODIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 MAN 3(C6 H12 O6) FORMUL 3 GLC C6 H12 O6 FORMUL 4 IOD 21(I 1-) FORMUL 25 HOH *452(H2 O) HELIX 1 AA1 ASN A 30 GLU A 42 1 13 HELIX 2 AA2 PHE A 57 ALA A 72 1 16 HELIX 3 AA3 GLU A 73 ASP A 78 1 6 HELIX 4 AA4 GLN A 79 ARG A 81 5 3 HELIX 5 AA5 ASN A 102 ASP A 105 5 4 HELIX 6 AA6 HIS A 106 LEU A 115 1 10 HELIX 7 AA7 PRO A 116 LEU A 118 5 3 HELIX 8 AA8 ASN A 119 TYR A 130 1 12 HELIX 9 AA9 GLN A 136 GLN A 159 1 24 HELIX 10 AB1 ASP A 160 ASP A 169 1 10 HELIX 11 AB2 THR A 172 SER A 186 1 15 HELIX 12 AB3 THR A 199 LYS A 204 5 6 HELIX 13 AB4 ASN A 208 GLY A 214 1 7 HELIX 14 AB5 ASN A 224 ALA A 234 1 11 HELIX 15 AB6 ASP A 242 ALA A 246 5 5 HELIX 16 AB7 THR A 266 LYS A 275 1 10 HELIX 17 AB8 SER A 286 ASN A 299 1 14 HELIX 18 AB9 THR A 339 ILE A 344 1 6 HELIX 19 AC1 ILE A 344 LYS A 382 1 39 HELIX 20 AC2 ASP A 383 LEU A 389 1 7 SHEET 1 AA1 2 ALA A 48 LYS A 49 0 SHEET 2 AA1 2 THR A 283 THR A 284 1 O THR A 283 N LYS A 49 SHEET 1 AA2 3 THR A 302 ARG A 303 0 SHEET 2 AA2 3 SER A 308 PHE A 313 -1 O ILE A 309 N THR A 302 SHEET 3 AA2 3 GLY A 325 TYR A 330 -1 O VAL A 328 N LEU A 310 SSBOND 1 CYS A 38 CYS A 277 1555 1555 2.05 SSBOND 2 CYS A 213 CYS A 231 1555 1555 2.04 SSBOND 3 CYS A 233 CYS A 247 1555 1555 2.04 SSBOND 4 CYS A 318 CYS A 327 1555 1555 2.08 LINK ND2 ASN A 68 C1 NAG B 1 1555 1555 1.45 LINK OG SER A 324 C1 GLC A 501 1555 1555 1.39 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.43 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.42 LINK O3 BMA B 3 C1 MAN B 4 1555 1555 1.43 LINK O6 BMA B 3 C1 MAN B 6 1555 1555 1.43 LINK O2 MAN B 4 C1 MAN B 5 1555 1555 1.42 CRYST1 75.426 75.426 106.441 90.00 90.00 120.00 P 3 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013258 0.007655 0.000000 0.00000 SCALE2 0.000000 0.015309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009395 0.00000 CONECT 207 3890 CONECT 689 5515 CONECT 3016 3246 CONECT 3246 3016 CONECT 3272 3446 CONECT 3446 3272 CONECT 3890 207 CONECT 4452 4550 CONECT 4516 5648 CONECT 4550 4452 CONECT 5515 689 5516 5526 CONECT 5516 5515 5517 5523 5529 CONECT 5517 5516 5518 5524 5530 CONECT 5518 5517 5519 5525 5531 CONECT 5519 5518 5520 5526 5532 CONECT 5520 5519 5527 5533 5534 CONECT 5521 5522 5523 5528 CONECT 5522 5521 5535 5536 5537 CONECT 5523 5516 5521 5538 CONECT 5524 5517 5539 CONECT 5525 5518 5541 CONECT 5526 5515 5519 CONECT 5527 5520 5540 CONECT 5528 5521 CONECT 5529 5516 CONECT 5530 5517 CONECT 5531 5518 CONECT 5532 5519 CONECT 5533 5520 CONECT 5534 5520 CONECT 5535 5522 CONECT 5536 5522 CONECT 5537 5522 CONECT 5538 5523 CONECT 5539 5524 CONECT 5540 5527 CONECT 5541 5525 5542 5552 CONECT 5542 5541 5543 5549 5555 CONECT 5543 5542 5544 5550 5556 CONECT 5544 5543 5545 5551 5557 CONECT 5545 5544 5546 5552 5558 CONECT 5546 5545 5553 5559 5560 CONECT 5547 5548 5549 5554 CONECT 5548 5547 5561 5562 5563 CONECT 5549 5542 5547 5564 CONECT 5550 5543 5565 CONECT 5551 5544 5567 CONECT 5552 5541 5545 CONECT 5553 5546 5566 CONECT 5554 5547 CONECT 5555 5542 CONECT 5556 5543 CONECT 5557 5544 CONECT 5558 5545 CONECT 5559 5546 CONECT 5560 5546 CONECT 5561 5548 CONECT 5562 5548 CONECT 5563 5548 CONECT 5564 5549 CONECT 5565 5550 CONECT 5566 5553 CONECT 5567 5551 5568 5576 CONECT 5568 5567 5569 5573 5578 CONECT 5569 5568 5570 5574 5579 CONECT 5570 5569 5571 5575 5580 CONECT 5571 5570 5572 5576 5581 CONECT 5572 5571 5577 5582 5583 CONECT 5573 5568 5584 CONECT 5574 5569 5586 CONECT 5575 5570 5585 CONECT 5576 5567 5571 CONECT 5577 5572 5627 CONECT 5578 5568 CONECT 5579 5569 CONECT 5580 5570 CONECT 5581 5571 CONECT 5582 5572 CONECT 5583 5572 CONECT 5584 5573 CONECT 5585 5575 CONECT 5586 5574 5587 5595 CONECT 5587 5586 5588 5592 5597 CONECT 5588 5587 5589 5593 5598 CONECT 5589 5588 5590 5594 5599 CONECT 5590 5589 5591 5595 5600 CONECT 5591 5590 5596 5601 5602 CONECT 5592 5587 5606 CONECT 5593 5588 5603 CONECT 5594 5589 5604 CONECT 5595 5586 5590 CONECT 5596 5591 5605 CONECT 5597 5587 CONECT 5598 5588 CONECT 5599 5589 CONECT 5600 5590 CONECT 5601 5591 CONECT 5602 5591 CONECT 5603 5593 CONECT 5604 5594 CONECT 5605 5596 CONECT 5606 5592 5607 5615 CONECT 5607 5606 5608 5612 5617 CONECT 5608 5607 5609 5613 5618 CONECT 5609 5608 5610 5614 5619 CONECT 5610 5609 5611 5615 5620 CONECT 5611 5610 5616 5621 5622 CONECT 5612 5607 5623 CONECT 5613 5608 5624 CONECT 5614 5609 5625 CONECT 5615 5606 5610 CONECT 5616 5611 5626 CONECT 5617 5607 CONECT 5618 5608 CONECT 5619 5609 CONECT 5620 5610 CONECT 5621 5611 CONECT 5622 5611 CONECT 5623 5612 CONECT 5624 5613 CONECT 5625 5614 CONECT 5626 5616 CONECT 5627 5577 5628 5636 CONECT 5628 5627 5629 5633 5638 CONECT 5629 5628 5630 5634 5639 CONECT 5630 5629 5631 5635 5640 CONECT 5631 5630 5632 5636 5641 CONECT 5632 5631 5637 5642 5643 CONECT 5633 5628 5644 CONECT 5634 5629 5645 CONECT 5635 5630 5646 CONECT 5636 5627 5631 CONECT 5637 5632 5647 CONECT 5638 5628 CONECT 5639 5629 CONECT 5640 5630 CONECT 5641 5631 CONECT 5642 5632 CONECT 5643 5632 CONECT 5644 5633 CONECT 5645 5634 CONECT 5646 5635 CONECT 5647 5637 CONECT 5648 4516 5649 5657 CONECT 5649 5648 5650 5654 5659 CONECT 5650 5649 5651 5655 5660 CONECT 5651 5650 5652 5656 5661 CONECT 5652 5651 5653 5657 5662 CONECT 5653 5652 5658 5663 5664 CONECT 5654 5649 5665 CONECT 5655 5650 5666 CONECT 5656 5651 5667 CONECT 5657 5648 5652 CONECT 5658 5653 5668 CONECT 5659 5649 CONECT 5660 5650 CONECT 5661 5651 CONECT 5662 5652 CONECT 5663 5653 CONECT 5664 5653 CONECT 5665 5654 CONECT 5666 5655 CONECT 5667 5656 CONECT 5668 5658 MASTER 361 0 28 20 5 0 0 6 3269 1 164 32 END