HEADER HYDROLASE 04-APR-23 8ONV TITLE KRAS-G13D IN COMPLEX WITH BI-2493 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KRAS, GTPASE, INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.BOETTCHER,L.HERDEIS REVDAT 3 19-JUN-24 8ONV 1 REMARK REVDAT 2 19-JUL-23 8ONV 1 JRNL REVDAT 1 07-JUN-23 8ONV 0 JRNL AUTH D.KIM,L.HERDEIS,D.RUDOLPH,Y.ZHAO,J.BOTTCHER,A.VIDES, JRNL AUTH 2 C.I.AYALA-SANTOS,Y.POURFARJAM,A.CUEVAS-NAVARRO,J.Y.XUE, JRNL AUTH 3 A.MANTOULIDIS,J.BROKER,T.WUNBERG,O.SCHAAF,J.POPOW, JRNL AUTH 4 B.WOLKERSTORFER,K.G.KROPATSCH,R.QU,E.DE STANCHINA,B.SANG, JRNL AUTH 5 C.LI,D.B.MCCONNELL,N.KRAUT,P.LITO JRNL TITL PAN-KRAS INHIBITOR DISABLES ONCOGENIC SIGNALLING AND TUMOUR JRNL TITL 2 GROWTH. JRNL REF NATURE V. 619 160 2023 JRNL REFN ESSN 1476-4687 JRNL PMID 37258666 JRNL DOI 10.1038/S41586-023-06123-3 REMARK 2 REMARK 2 RESOLUTION. 1.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 80.6 REMARK 3 NUMBER OF REFLECTIONS : 83245 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.135 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 4237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.8800 - 3.1400 1.00 3509 195 0.1474 0.1849 REMARK 3 2 3.1400 - 2.4900 1.00 3370 199 0.1389 0.1744 REMARK 3 3 2.4900 - 2.1800 1.00 3336 179 0.1240 0.1255 REMARK 3 4 2.1800 - 1.9800 1.00 3308 171 0.1249 0.1420 REMARK 3 5 1.9800 - 1.8400 1.00 3310 170 0.1237 0.1376 REMARK 3 6 1.8400 - 1.7300 1.00 3273 195 0.1285 0.1491 REMARK 3 7 1.7300 - 1.6400 1.00 3282 160 0.1243 0.1338 REMARK 3 8 1.6400 - 1.5700 1.00 3261 191 0.1186 0.1315 REMARK 3 9 1.5700 - 1.5100 1.00 3277 166 0.1074 0.1344 REMARK 3 10 1.5100 - 1.4600 1.00 3265 184 0.1103 0.1342 REMARK 3 11 1.4600 - 1.4100 1.00 3267 163 0.1131 0.1361 REMARK 3 12 1.4100 - 1.3700 1.00 3278 174 0.1184 0.1393 REMARK 3 13 1.3700 - 1.3400 1.00 3241 166 0.1263 0.1551 REMARK 3 14 1.3400 - 1.3000 1.00 3226 182 0.1195 0.1407 REMARK 3 15 1.3000 - 1.2700 0.99 3231 189 0.1230 0.1384 REMARK 3 16 1.2700 - 1.2500 1.00 3201 188 0.1246 0.1399 REMARK 3 17 1.2500 - 1.2200 0.99 3225 186 0.1302 0.1556 REMARK 3 18 1.2200 - 1.2000 0.99 3225 141 0.1308 0.1507 REMARK 3 19 1.2000 - 1.1800 0.99 3240 159 0.1360 0.1712 REMARK 3 20 1.1800 - 1.1600 0.98 3183 162 0.1440 0.1476 REMARK 3 21 1.1600 - 1.1400 0.95 3054 163 0.1612 0.1864 REMARK 3 22 1.1400 - 1.1200 0.88 2885 147 0.1796 0.1740 REMARK 3 23 1.1200 - 1.1000 0.78 2528 130 0.1922 0.2419 REMARK 3 24 1.1000 - 1.0900 0.60 1976 106 0.2005 0.1665 REMARK 3 25 1.0900 - 1.0700 0.44 1401 78 0.2353 0.2508 REMARK 3 26 1.0700 - 1.0600 0.24 773 34 0.2225 0.2384 REMARK 3 27 1.0600 - 1.0500 0.13 416 28 0.2457 0.2776 REMARK 3 28 1.0500 - 1.0300 0.08 268 22 0.2470 0.2000 REMARK 3 29 1.0300 - 1.0200 0.05 154 6 0.3279 0.2484 REMARK 3 30 1.0200 - 1.0100 0.01 45 3 0.3470 0.4598 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.057 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.04 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 1503 REMARK 3 ANGLE : 1.114 2048 REMARK 3 CHIRALITY : 0.085 223 REMARK 3 PLANARITY : 0.011 277 REMARK 3 DIHEDRAL : 5.792 261 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8ONV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-APR-23. REMARK 100 THE DEPOSITION ID IS D_1292129676. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83260 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.010 REMARK 200 RESOLUTION RANGE LOW (A) : 56.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2MM MGCL2, 15-27% PEG 2000, 100MM REMARK 280 SODIUM ACETATE PH=4.4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.89950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.42250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.89950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 20.42250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 169 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 101 N CA C O CB CG CD REMARK 480 LYS A 101 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HZ3 LYS A 101 O HOH A 430 3555 1.57 REMARK 500 O HOH A 388 O HOH A 482 3556 2.10 REMARK 500 NZ LYS A 101 O HOH A 430 3555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 13 3.83 80.97 REMARK 500 ASP A 33 116.79 -38.34 REMARK 500 ASP A 33 121.19 -38.34 REMARK 500 LYS A 117 33.62 70.92 REMARK 500 SER A 122 37.47 -89.41 REMARK 500 ARG A 149 -2.28 81.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 577 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 578 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 579 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 580 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 581 DISTANCE = 8.35 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 GDP A 201 O2B 92.7 REMARK 620 3 HOH A 330 O 91.0 87.2 REMARK 620 4 HOH A 343 O 84.3 95.2 174.8 REMARK 620 5 HOH A 377 O 173.2 89.4 95.6 89.0 REMARK 620 6 HOH A 390 O 89.9 172.9 86.1 91.6 88.8 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8AZR RELATED DB: PDB REMARK 900 RELATED ID: 8AZV RELATED DB: PDB REMARK 900 RELATED ID: 8AZX RELATED DB: PDB REMARK 900 RELATED ID: 8AZY RELATED DB: PDB REMARK 900 RELATED ID: 8AZZ RELATED DB: PDB REMARK 900 RELATED ID: 8B00 RELATED DB: PDB DBREF 8ONV A 1 164 UNP P01116 RASK_HUMAN 1 164 SEQADV 8ONV GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 8ONV ASP A 13 UNP P01116 GLY 13 ENGINEERED MUTATION SEQADV 8ONV SER A 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 8ONV GLY A 151 UNP P01116 ARG 151 ENGINEERED MUTATION SEQADV 8ONV ASP A 153 UNP P01116 GLU 153 ENGINEERED MUTATION SEQADV 8ONV LYS A 165 UNP P01116 EXPRESSION TAG SEQADV 8ONV HIS A 166 UNP P01116 EXPRESSION TAG SEQADV 8ONV LYS A 167 UNP P01116 EXPRESSION TAG SEQADV 8ONV GLU A 168 UNP P01116 EXPRESSION TAG SEQADV 8ONV LYS A 169 UNP P01116 EXPRESSION TAG SEQRES 1 A 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 170 ASP VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 A 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 170 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 A 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 A 170 LYS HET GDP A 201 40 HET MG A 202 1 HET EDO A 203 10 HET EDO A 204 10 HET VU6 A 205 61 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETNAM VU6 (7~{S})-2'-AZANYL-3-[2-[(2~{S})-2-METHYLPIPERAZIN-1- HETNAM 2 VU6 YL]PYRIMIDIN-4-YL]SPIRO[5,6-DIHYDRO-4~{H}-1,2- HETNAM 3 VU6 BENZOXAZOLE-7,4'-6,7-DIHYDRO-5~{H}-1-BENZOTHIOPHENE]- HETNAM 4 VU6 3'-CARBONITRILE HETSYN EDO ETHYLENE GLYCOL FORMUL 2 GDP C10 H15 N5 O11 P2 FORMUL 3 MG MG 2+ FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 VU6 C24 H27 N7 O S FORMUL 7 HOH *281(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 SER A 65 THR A 74 1 10 HELIX 3 AA3 ASN A 86 ASP A 92 1 7 HELIX 4 AA4 ASP A 92 ASP A 105 1 14 HELIX 5 AA5 ASP A 126 GLY A 138 1 13 HELIX 6 AA6 GLY A 151 GLU A 168 1 18 SHEET 1 AA1 6 ASP A 38 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 ASP A 57 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 GLU A 3 VAL A 9 1 N LEU A 6 O LEU A 56 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 LINK OG SER A 17 MG MG A 202 1555 1555 2.08 LINK O2B GDP A 201 MG MG A 202 1555 1555 2.05 LINK MG MG A 202 O HOH A 330 1555 1555 2.08 LINK MG MG A 202 O HOH A 343 1555 1555 2.04 LINK MG MG A 202 O HOH A 377 1555 1555 2.09 LINK MG MG A 202 O HOH A 390 1555 1555 2.10 CRYST1 85.799 40.845 55.960 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011655 0.000000 0.000000 0.00000 SCALE2 0.000000 0.024483 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017870 0.00000