HEADER MEMBRANE PROTEIN 12-APR-23 8OQY TITLE STRUCTURE OF APO FORM OF HUMAN GAMMA-SECRETASE PSEN1 APH-1B ISOFORM TITLE 2 RECONSTITUTED INTO LIPID NANODISC COMPND MOL_ID: 1; COMPND 2 MOLECULE: NICASTRIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PRESENILIN-1 CTF12; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: PS1-CTF12; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: GAMMA-SECRETASE SUBUNIT APH-1B; COMPND 12 CHAIN: C; COMPND 13 SYNONYM: APH-1B,APH-1BETA,PRESENILIN-STABILIZATION FACTOR-LIKE; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: GAMMA-SECRETASE SUBUNIT PEN-2; COMPND 17 CHAIN: D; COMPND 18 SYNONYM: PRESENILIN ENHANCER PROTEIN 2; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NCSTN, KIAA0253, UNQ1874/PRO4317; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BTI-TN5B1-4; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: PSEN1, AD3, PS1, PSNL1; SOURCE 14 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: BTI-TN5B1-4; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: APH1B, PSFL, UNQ688/PRO1328; SOURCE 22 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 24 EXPRESSION_SYSTEM_CELL_LINE: BTI-TN5B1-4; SOURCE 25 MOL_ID: 4; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_COMMON: HUMAN; SOURCE 28 ORGANISM_TAXID: 9606; SOURCE 29 GENE: PSENEN, PEN2, MDS033; SOURCE 30 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 31 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 32 EXPRESSION_SYSTEM_CELL_LINE: BTI-TN5B1-4 KEYWDS INTRAMEMBRANE PROTEOLYSIS, PROTEASE, DI-ASPARTYL PROTEASE, KEYWDS 2 ALZHEIMER'S DISEASE, COMPLEX, MEMBRANE PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR I.ODORCIC,L.CHAVEZ GUTIERREZ,R.G.EFREMOV REVDAT 2 19-JUN-24 8OQY 1 JRNL REVDAT 1 24-APR-24 8OQY 0 JRNL AUTH I.ODORCIC,M.B.HAMED,S.LISMONT,L.CHAVEZ-GUTIERREZ,R.G.EFREMOV JRNL TITL APO AND A BETA 46-BOUND GAMMA-SECRETASE STRUCTURES PROVIDE JRNL TITL 2 INSIGHTS INTO AMYLOID-BETA PROCESSING BY THE APH-1B ISOFORM. JRNL REF NAT COMMUN V. 15 4479 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38802343 JRNL DOI 10.1038/S41467-024-48776-2 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOLO, SERIALEM, CTFFIND, COOT, REMARK 3 PHENIX, RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 5FN5 REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 111197 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8OQY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-23. REMARK 100 THE DEPOSITION ID IS D_1292128795. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : GAMMA SECRETASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.04 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 10733 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : JEOL CRYO ARM 300 REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.55 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 60000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 ALA A 4 REMARK 465 GLY A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 GLY A 9 REMARK 465 ALA A 10 REMARK 465 ASP A 11 REMARK 465 PRO A 12 REMARK 465 GLY A 13 REMARK 465 SER A 14 REMARK 465 ARG A 15 REMARK 465 GLY A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 ARG A 19 REMARK 465 LEU A 20 REMARK 465 LEU A 21 REMARK 465 SER A 22 REMARK 465 PHE A 23 REMARK 465 CYS A 24 REMARK 465 VAL A 25 REMARK 465 LEU A 26 REMARK 465 LEU A 27 REMARK 465 ALA A 28 REMARK 465 GLY A 29 REMARK 465 LEU A 30 REMARK 465 CYS A 31 REMARK 465 ARG A 32 REMARK 465 GLY A 33 REMARK 465 ALA A 700 REMARK 465 PRO A 701 REMARK 465 ARG A 702 REMARK 465 GLU A 703 REMARK 465 PRO A 704 REMARK 465 GLY A 705 REMARK 465 ALA A 706 REMARK 465 VAL A 707 REMARK 465 SER A 708 REMARK 465 TYR A 709 REMARK 465 GLY A 710 REMARK 465 THR A 711 REMARK 465 LEU A 712 REMARK 465 GLU A 713 REMARK 465 VAL A 714 REMARK 465 LEU A 715 REMARK 465 PHE A 716 REMARK 465 GLN A 717 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 GLU B 3 REMARK 465 LEU B 4 REMARK 465 PRO B 5 REMARK 465 ALA B 6 REMARK 465 PRO B 7 REMARK 465 LEU B 8 REMARK 465 SER B 9 REMARK 465 TYR B 10 REMARK 465 PHE B 11 REMARK 465 GLN B 12 REMARK 465 ASN B 13 REMARK 465 ALA B 14 REMARK 465 GLN B 15 REMARK 465 MET B 16 REMARK 465 SER B 17 REMARK 465 GLU B 18 REMARK 465 ASP B 19 REMARK 465 ASN B 20 REMARK 465 HIS B 21 REMARK 465 LEU B 22 REMARK 465 SER B 23 REMARK 465 ASN B 24 REMARK 465 THR B 25 REMARK 465 VAL B 26 REMARK 465 ARG B 27 REMARK 465 SER B 28 REMARK 465 GLN B 29 REMARK 465 ASN B 30 REMARK 465 ASP B 31 REMARK 465 ASN B 32 REMARK 465 ARG B 33 REMARK 465 GLU B 34 REMARK 465 ARG B 35 REMARK 465 GLN B 36 REMARK 465 GLU B 37 REMARK 465 HIS B 38 REMARK 465 ASN B 39 REMARK 465 ASP B 40 REMARK 465 ARG B 41 REMARK 465 ARG B 42 REMARK 465 SER B 43 REMARK 465 LEU B 44 REMARK 465 GLY B 45 REMARK 465 HIS B 46 REMARK 465 PRO B 47 REMARK 465 GLU B 48 REMARK 465 PRO B 49 REMARK 465 LEU B 50 REMARK 465 SER B 51 REMARK 465 ASN B 52 REMARK 465 GLY B 53 REMARK 465 ARG B 54 REMARK 465 PRO B 55 REMARK 465 GLN B 56 REMARK 465 GLY B 57 REMARK 465 ASN B 58 REMARK 465 SER B 59 REMARK 465 ARG B 60 REMARK 465 GLN B 61 REMARK 465 VAL B 62 REMARK 465 VAL B 63 REMARK 465 GLU B 64 REMARK 465 GLN B 65 REMARK 465 ASP B 66 REMARK 465 GLU B 67 REMARK 465 GLU B 68 REMARK 465 GLU B 69 REMARK 465 ASP B 70 REMARK 465 GLU B 71 REMARK 465 GLU B 72 REMARK 465 ARG B 108 REMARK 465 LYS B 109 REMARK 465 ASP B 110 REMARK 465 GLY B 111 REMARK 465 GLN B 112 REMARK 465 LEU B 113 REMARK 465 ILE B 114 REMARK 465 TYR B 115 REMARK 465 THR B 116 REMARK 465 PRO B 117 REMARK 465 PHE B 118 REMARK 465 THR B 119 REMARK 465 GLU B 120 REMARK 465 ASP B 121 REMARK 465 THR B 122 REMARK 465 GLU B 123 REMARK 465 THR B 124 REMARK 465 VAL B 125 REMARK 465 GLY B 126 REMARK 465 GLN B 127 REMARK 465 ARG B 128 REMARK 465 ALA B 129 REMARK 465 LEU B 130 REMARK 465 HIS B 131 REMARK 465 SER B 132 REMARK 465 ILE B 133 REMARK 465 LEU B 134 REMARK 465 ASN B 135 REMARK 465 ALA B 136 REMARK 465 ALA B 137 REMARK 465 ILE B 138 REMARK 465 MET B 139 REMARK 465 ILE B 140 REMARK 465 SER B 141 REMARK 465 VAL B 142 REMARK 465 ILE B 143 REMARK 465 VAL B 144 REMARK 465 VAL B 145 REMARK 465 MET B 146 REMARK 465 THR B 147 REMARK 465 ILE B 148 REMARK 465 LEU B 149 REMARK 465 LEU B 150 REMARK 465 VAL B 151 REMARK 465 VAL B 152 REMARK 465 LEU B 153 REMARK 465 TYR B 154 REMARK 465 LYS B 155 REMARK 465 TYR B 156 REMARK 465 ARG B 157 REMARK 465 CYS B 158 REMARK 465 TYR B 159 REMARK 465 ASP B 257 REMARK 465 LEU B 258 REMARK 465 VAL B 259 REMARK 465 ALA B 260 REMARK 465 VAL B 261 REMARK 465 LEU B 262 REMARK 465 CYS B 263 REMARK 465 PRO B 264 REMARK 465 LYS B 265 REMARK 465 GLY B 266 REMARK 465 PRO B 267 REMARK 465 LEU B 268 REMARK 465 ARG B 269 REMARK 465 MET B 270 REMARK 465 LEU B 271 REMARK 465 VAL B 272 REMARK 465 GLU B 273 REMARK 465 THR B 274 REMARK 465 ALA B 275 REMARK 465 GLN B 276 REMARK 465 GLU B 277 REMARK 465 ARG B 278 REMARK 465 ASN B 279 REMARK 465 SER B 290 REMARK 465 THR B 291 REMARK 465 MET B 292 REMARK 465 VAL B 293 REMARK 465 TRP B 294 REMARK 465 LEU B 295 REMARK 465 VAL B 296 REMARK 465 ASN B 297 REMARK 465 MET B 298 REMARK 465 ALA B 299 REMARK 465 GLU B 300 REMARK 465 GLY B 301 REMARK 465 ASP B 302 REMARK 465 PRO B 303 REMARK 465 GLU B 304 REMARK 465 ALA B 305 REMARK 465 GLN B 306 REMARK 465 ARG B 307 REMARK 465 ARG B 308 REMARK 465 VAL B 309 REMARK 465 SER B 310 REMARK 465 LYS B 311 REMARK 465 ASN B 312 REMARK 465 SER B 313 REMARK 465 LYS B 314 REMARK 465 TYR B 315 REMARK 465 ASN B 316 REMARK 465 ALA B 317 REMARK 465 GLU B 318 REMARK 465 SER B 319 REMARK 465 THR B 320 REMARK 465 GLU B 321 REMARK 465 ARG B 322 REMARK 465 GLU B 323 REMARK 465 SER B 324 REMARK 465 GLN B 325 REMARK 465 ASP B 326 REMARK 465 THR B 327 REMARK 465 VAL B 328 REMARK 465 ALA B 329 REMARK 465 GLU B 330 REMARK 465 ASN B 331 REMARK 465 ASP B 332 REMARK 465 ASP B 333 REMARK 465 GLY B 334 REMARK 465 GLY B 335 REMARK 465 PHE B 336 REMARK 465 SER B 337 REMARK 465 GLU B 338 REMARK 465 GLU B 339 REMARK 465 TRP B 340 REMARK 465 GLU B 341 REMARK 465 ALA B 342 REMARK 465 GLN B 343 REMARK 465 ARG B 344 REMARK 465 ASP B 345 REMARK 465 SER B 346 REMARK 465 HIS B 347 REMARK 465 LEU B 348 REMARK 465 GLY B 349 REMARK 465 PRO B 350 REMARK 465 HIS B 351 REMARK 465 ARG B 352 REMARK 465 SER B 353 REMARK 465 THR B 354 REMARK 465 PRO B 355 REMARK 465 GLU B 356 REMARK 465 SER B 357 REMARK 465 ARG B 358 REMARK 465 ALA B 359 REMARK 465 ALA B 360 REMARK 465 VAL B 361 REMARK 465 GLN B 362 REMARK 465 GLU B 363 REMARK 465 LEU B 364 REMARK 465 SER B 365 REMARK 465 SER B 366 REMARK 465 SER B 367 REMARK 465 ILE B 368 REMARK 465 LEU B 369 REMARK 465 ALA B 370 REMARK 465 GLY B 371 REMARK 465 GLU B 372 REMARK 465 ASP B 373 REMARK 465 PRO B 374 REMARK 465 GLU B 375 REMARK 465 GLU B 376 REMARK 465 ARG B 377 REMARK 465 GLY B 378 REMARK 465 VAL B 379 REMARK 465 LYS B 380 REMARK 465 LEU B 381 REMARK 465 GLY B 382 REMARK 465 MET C 1 REMARK 465 ASN C 105 REMARK 465 PRO C 106 REMARK 465 GLY C 107 REMARK 465 GLU C 108 REMARK 465 THR C 109 REMARK 465 ALA C 110 REMARK 465 LYS C 239 REMARK 465 LEU C 240 REMARK 465 CYS C 241 REMARK 465 LEU C 242 REMARK 465 LEU C 243 REMARK 465 CYS C 244 REMARK 465 GLN C 245 REMARK 465 ASP C 246 REMARK 465 LYS C 247 REMARK 465 ASN C 248 REMARK 465 PHE C 249 REMARK 465 LEU C 250 REMARK 465 LEU C 251 REMARK 465 TYR C 252 REMARK 465 ASN C 253 REMARK 465 GLN C 254 REMARK 465 ARG C 255 REMARK 465 SER C 256 REMARK 465 ARG C 257 REMARK 465 MET D 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 79 CG CD OE1 OE2 REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 GLU A 388 CG CD OE1 OE2 REMARK 470 GLU A 667 CG CD OE1 OE2 REMARK 470 LEU B 73 CG CD1 CD2 REMARK 470 THR B 74 OG1 CG2 REMARK 470 LEU B 75 CG CD1 CD2 REMARK 470 LYS B 76 CG CD CE NZ REMARK 470 LYS B 80 CG CD CE NZ REMARK 470 MET B 84 CG SD CE REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 ILE B 162 CG1 CG2 CD1 REMARK 470 LYS B 216 CG CD CE NZ REMARK 470 LEU B 219 CG CD1 CD2 REMARK 470 LYS B 239 CG CD CE NZ REMARK 470 LEU B 241 CG CD1 CD2 REMARK 470 THR B 245 OG1 CG2 REMARK 470 LEU B 248 CG CD1 CD2 REMARK 470 ILE B 249 CG1 CG2 CD1 REMARK 470 LEU B 250 CG CD1 CD2 REMARK 470 VAL B 252 CG1 CG2 REMARK 470 ILE B 253 CG1 CG2 CD1 REMARK 470 SER B 254 OG REMARK 470 VAL B 255 CG1 CG2 REMARK 470 TYR B 256 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 280 CG CD OE1 OE2 REMARK 470 LEU B 282 CG CD1 CD2 REMARK 470 LEU B 286 CG CD1 CD2 REMARK 470 ILE B 287 CG1 CG2 CD1 REMARK 470 ASP B 385 CG OD1 OD2 REMARK 470 PHE B 388 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 428 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 429 CG CD CE NZ REMARK 470 LYS B 430 CG CD CE NZ REMARK 470 LEU B 432 CG CD1 CD2 REMARK 470 THR B 440 OG1 CG2 REMARK 470 ASP C 61 CG OD1 OD2 REMARK 470 ASN C 62 CG OD1 ND2 REMARK 470 LYS C 63 CG CD CE NZ REMARK 470 ASP C 64 CG OD1 OD2 REMARK 470 GLN C 68 CG CD OE1 NE2 REMARK 470 GLU C 99 CG CD OE1 OE2 REMARK 470 LYS C 102 CG CD CE NZ REMARK 470 ILE C 104 CG1 CG2 CD1 REMARK 470 ASP C 179 CG OD1 OD2 REMARK 470 LYS C 183 CG CD CE NZ REMARK 470 LYS C 184 CG CD CE NZ REMARK 470 LYS C 185 CG CD CE NZ REMARK 470 SER C 234 OG REMARK 470 CYS C 235 SG REMARK 470 ARG C 236 CG CD NE CZ NH1 NH2 REMARK 470 SER C 237 OG REMARK 470 LEU C 238 CG CD1 CD2 REMARK 470 ASN D 2 CG OD1 ND2 REMARK 470 VAL D 6 CG1 CG2 REMARK 470 GLU D 9 CG CD OE1 OE2 REMARK 470 GLU D 10 CG CD OE1 OE2 REMARK 470 LYS D 11 CG CD CE NZ REMARK 470 LEU D 12 CG CD1 CD2 REMARK 470 TYR D 18 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 40 CG CD OE1 OE2 REMARK 470 LEU D 43 CG CD1 CD2 REMARK 470 VAL D 44 CG1 CG2 REMARK 470 TYR D 47 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER D 51 OG REMARK 470 ILE D 53 CG1 CG2 CD1 REMARK 470 VAL D 57 CG1 CG2 REMARK 470 VAL D 62 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 77 -19.93 -147.87 REMARK 500 PRO A 130 118.38 -39.68 REMARK 500 ASP A 198 -76.54 -82.08 REMARK 500 HIS A 199 52.11 -97.90 REMARK 500 ASN A 200 9.33 -156.14 REMARK 500 ASN A 204 -121.99 57.49 REMARK 500 ILE A 225 -115.92 62.36 REMARK 500 ASN A 243 77.61 60.28 REMARK 500 ASN A 290 -131.76 47.56 REMARK 500 VAL A 291 46.62 35.30 REMARK 500 ALA A 292 78.82 -110.83 REMARK 500 PHE A 335 59.34 -93.84 REMARK 500 LEU A 370 40.02 -102.48 REMARK 500 PRO A 416 174.12 -58.08 REMARK 500 GLN A 420 127.37 -39.27 REMARK 500 ALA A 502 34.31 -90.72 REMARK 500 ASN A 506 -65.72 71.13 REMARK 500 PHE A 507 78.84 -106.32 REMARK 500 ILE A 527 -62.70 -109.04 REMARK 500 SER A 611 -129.87 46.52 REMARK 500 LEU A 617 79.44 -118.56 REMARK 500 GLN A 639 76.33 -100.37 REMARK 500 SER B 104 -4.65 74.10 REMARK 500 ASN B 190 62.59 60.56 REMARK 500 TRP B 215 -16.15 74.49 REMARK 500 LYS B 216 -153.19 -170.06 REMARK 500 PHE B 283 61.23 38.89 REMARK 500 LEU B 432 61.08 70.49 REMARK 500 LEU B 435 85.26 -151.24 REMARK 500 PRO B 436 -66.72 -97.57 REMARK 500 LYS C 102 -144.55 64.20 REMARK 500 LEU D 26 71.31 -117.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PC1 A 808 REMARK 610 PC1 B 501 REMARK 610 PC1 C 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-17112 RELATED DB: EMDB REMARK 900 STRUCTURE OF APO FORM OF HUMAN GAMMA-SECRETASE PSEN1 APH-1B ISOFORM REMARK 900 RECONSTITUTED INTO LIPID NANODISC DBREF 8OQY A 1 709 UNP Q92542 NICA_HUMAN 1 709 DBREF 8OQY B 1 467 UNP P49768 PSN1_HUMAN 1 467 DBREF 8OQY C 1 257 UNP Q8WW43 APH1B_HUMAN 1 257 DBREF 8OQY D 1 101 UNP Q9NZ42 PEN2_HUMAN 1 101 SEQADV 8OQY GLY A 710 UNP Q92542 EXPRESSION TAG SEQADV 8OQY THR A 711 UNP Q92542 EXPRESSION TAG SEQADV 8OQY LEU A 712 UNP Q92542 EXPRESSION TAG SEQADV 8OQY GLU A 713 UNP Q92542 EXPRESSION TAG SEQADV 8OQY VAL A 714 UNP Q92542 EXPRESSION TAG SEQADV 8OQY LEU A 715 UNP Q92542 EXPRESSION TAG SEQADV 8OQY PHE A 716 UNP Q92542 EXPRESSION TAG SEQADV 8OQY GLN A 717 UNP Q92542 EXPRESSION TAG SEQRES 1 A 717 MET ALA THR ALA GLY GLY GLY SER GLY ALA ASP PRO GLY SEQRES 2 A 717 SER ARG GLY LEU LEU ARG LEU LEU SER PHE CYS VAL LEU SEQRES 3 A 717 LEU ALA GLY LEU CYS ARG GLY ASN SER VAL GLU ARG LYS SEQRES 4 A 717 ILE TYR ILE PRO LEU ASN LYS THR ALA PRO CYS VAL ARG SEQRES 5 A 717 LEU LEU ASN ALA THR HIS GLN ILE GLY CYS GLN SER SER SEQRES 6 A 717 ILE SER GLY ASP THR GLY VAL ILE HIS VAL VAL GLU LYS SEQRES 7 A 717 GLU GLU ASP LEU GLN TRP VAL LEU THR ASP GLY PRO ASN SEQRES 8 A 717 PRO PRO TYR MET VAL LEU LEU GLU SER LYS HIS PHE THR SEQRES 9 A 717 ARG ASP LEU MET GLU LYS LEU LYS GLY ARG THR SER ARG SEQRES 10 A 717 ILE ALA GLY LEU ALA VAL SER LEU THR LYS PRO SER PRO SEQRES 11 A 717 ALA SER GLY PHE SER PRO SER VAL GLN CYS PRO ASN ASP SEQRES 12 A 717 GLY PHE GLY VAL TYR SER ASN SER TYR GLY PRO GLU PHE SEQRES 13 A 717 ALA HIS CYS ARG GLU ILE GLN TRP ASN SER LEU GLY ASN SEQRES 14 A 717 GLY LEU ALA TYR GLU ASP PHE SER PHE PRO ILE PHE LEU SEQRES 15 A 717 LEU GLU ASP GLU ASN GLU THR LYS VAL ILE LYS GLN CYS SEQRES 16 A 717 TYR GLN ASP HIS ASN LEU SER GLN ASN GLY SER ALA PRO SEQRES 17 A 717 THR PHE PRO LEU CYS ALA MET GLN LEU PHE SER HIS MET SEQRES 18 A 717 HIS ALA VAL ILE SER THR ALA THR CYS MET ARG ARG SER SEQRES 19 A 717 SER ILE GLN SER THR PHE SER ILE ASN PRO GLU ILE VAL SEQRES 20 A 717 CYS ASP PRO LEU SER ASP TYR ASN VAL TRP SER MET LEU SEQRES 21 A 717 LYS PRO ILE ASN THR THR GLY THR LEU LYS PRO ASP ASP SEQRES 22 A 717 ARG VAL VAL VAL ALA ALA THR ARG LEU ASP SER ARG SER SEQRES 23 A 717 PHE PHE TRP ASN VAL ALA PRO GLY ALA GLU SER ALA VAL SEQRES 24 A 717 ALA SER PHE VAL THR GLN LEU ALA ALA ALA GLU ALA LEU SEQRES 25 A 717 GLN LYS ALA PRO ASP VAL THR THR LEU PRO ARG ASN VAL SEQRES 26 A 717 MET PHE VAL PHE PHE GLN GLY GLU THR PHE ASP TYR ILE SEQRES 27 A 717 GLY SER SER ARG MET VAL TYR ASP MET GLU LYS GLY LYS SEQRES 28 A 717 PHE PRO VAL GLN LEU GLU ASN VAL ASP SER PHE VAL GLU SEQRES 29 A 717 LEU GLY GLN VAL ALA LEU ARG THR SER LEU GLU LEU TRP SEQRES 30 A 717 MET HIS THR ASP PRO VAL SER GLN LYS ASN GLU SER VAL SEQRES 31 A 717 ARG ASN GLN VAL GLU ASP LEU LEU ALA THR LEU GLU LYS SEQRES 32 A 717 SER GLY ALA GLY VAL PRO ALA VAL ILE LEU ARG ARG PRO SEQRES 33 A 717 ASN GLN SER GLN PRO LEU PRO PRO SER SER LEU GLN ARG SEQRES 34 A 717 PHE LEU ARG ALA ARG ASN ILE SER GLY VAL VAL LEU ALA SEQRES 35 A 717 ASP HIS SER GLY ALA PHE HIS ASN LYS TYR TYR GLN SER SEQRES 36 A 717 ILE TYR ASP THR ALA GLU ASN ILE ASN VAL SER TYR PRO SEQRES 37 A 717 GLU TRP LEU SER PRO GLU GLU ASP LEU ASN PHE VAL THR SEQRES 38 A 717 ASP THR ALA LYS ALA LEU ALA ASP VAL ALA THR VAL LEU SEQRES 39 A 717 GLY ARG ALA LEU TYR GLU LEU ALA GLY GLY THR ASN PHE SEQRES 40 A 717 SER ASP THR VAL GLN ALA ASP PRO GLN THR VAL THR ARG SEQRES 41 A 717 LEU LEU TYR GLY PHE LEU ILE LYS ALA ASN ASN SER TRP SEQRES 42 A 717 PHE GLN SER ILE LEU ARG GLN ASP LEU ARG SER TYR LEU SEQRES 43 A 717 GLY ASP GLY PRO LEU GLN HIS TYR ILE ALA VAL SER SER SEQRES 44 A 717 PRO THR ASN THR THR TYR VAL VAL GLN TYR ALA LEU ALA SEQRES 45 A 717 ASN LEU THR GLY THR VAL VAL ASN LEU THR ARG GLU GLN SEQRES 46 A 717 CYS GLN ASP PRO SER LYS VAL PRO SER GLU ASN LYS ASP SEQRES 47 A 717 LEU TYR GLU TYR SER TRP VAL GLN GLY PRO LEU HIS SER SEQRES 48 A 717 ASN GLU THR ASP ARG LEU PRO ARG CYS VAL ARG SER THR SEQRES 49 A 717 ALA ARG LEU ALA ARG ALA LEU SER PRO ALA PHE GLU LEU SEQRES 50 A 717 SER GLN TRP SER SER THR GLU TYR SER THR TRP THR GLU SEQRES 51 A 717 SER ARG TRP LYS ASP ILE ARG ALA ARG ILE PHE LEU ILE SEQRES 52 A 717 ALA SER LYS GLU LEU GLU LEU ILE THR LEU THR VAL GLY SEQRES 53 A 717 PHE GLY ILE LEU ILE PHE SER LEU ILE VAL THR TYR CYS SEQRES 54 A 717 ILE ASN ALA LYS ALA ASP VAL LEU PHE ILE ALA PRO ARG SEQRES 55 A 717 GLU PRO GLY ALA VAL SER TYR GLY THR LEU GLU VAL LEU SEQRES 56 A 717 PHE GLN SEQRES 1 B 467 MET THR GLU LEU PRO ALA PRO LEU SER TYR PHE GLN ASN SEQRES 2 B 467 ALA GLN MET SER GLU ASP ASN HIS LEU SER ASN THR VAL SEQRES 3 B 467 ARG SER GLN ASN ASP ASN ARG GLU ARG GLN GLU HIS ASN SEQRES 4 B 467 ASP ARG ARG SER LEU GLY HIS PRO GLU PRO LEU SER ASN SEQRES 5 B 467 GLY ARG PRO GLN GLY ASN SER ARG GLN VAL VAL GLU GLN SEQRES 6 B 467 ASP GLU GLU GLU ASP GLU GLU LEU THR LEU LYS TYR GLY SEQRES 7 B 467 ALA LYS HIS VAL ILE MET LEU PHE VAL PRO VAL THR LEU SEQRES 8 B 467 CYS MET VAL VAL VAL VAL ALA THR ILE LYS SER VAL SER SEQRES 9 B 467 PHE TYR THR ARG LYS ASP GLY GLN LEU ILE TYR THR PRO SEQRES 10 B 467 PHE THR GLU ASP THR GLU THR VAL GLY GLN ARG ALA LEU SEQRES 11 B 467 HIS SER ILE LEU ASN ALA ALA ILE MET ILE SER VAL ILE SEQRES 12 B 467 VAL VAL MET THR ILE LEU LEU VAL VAL LEU TYR LYS TYR SEQRES 13 B 467 ARG CYS TYR LYS VAL ILE HIS ALA TRP LEU ILE ILE SER SEQRES 14 B 467 SER LEU LEU LEU LEU PHE PHE PHE SER PHE ILE TYR LEU SEQRES 15 B 467 GLY GLU VAL PHE LYS THR TYR ASN VAL ALA VAL ASP TYR SEQRES 16 B 467 ILE THR VAL ALA LEU LEU ILE TRP ASN PHE GLY VAL VAL SEQRES 17 B 467 GLY MET ILE SER ILE HIS TRP LYS GLY PRO LEU ARG LEU SEQRES 18 B 467 GLN GLN ALA TYR LEU ILE MET ILE SER ALA LEU MET ALA SEQRES 19 B 467 LEU VAL PHE ILE LYS TYR LEU PRO GLU TRP THR ALA TRP SEQRES 20 B 467 LEU ILE LEU ALA VAL ILE SER VAL TYR ASP LEU VAL ALA SEQRES 21 B 467 VAL LEU CYS PRO LYS GLY PRO LEU ARG MET LEU VAL GLU SEQRES 22 B 467 THR ALA GLN GLU ARG ASN GLU THR LEU PHE PRO ALA LEU SEQRES 23 B 467 ILE TYR SER SER THR MET VAL TRP LEU VAL ASN MET ALA SEQRES 24 B 467 GLU GLY ASP PRO GLU ALA GLN ARG ARG VAL SER LYS ASN SEQRES 25 B 467 SER LYS TYR ASN ALA GLU SER THR GLU ARG GLU SER GLN SEQRES 26 B 467 ASP THR VAL ALA GLU ASN ASP ASP GLY GLY PHE SER GLU SEQRES 27 B 467 GLU TRP GLU ALA GLN ARG ASP SER HIS LEU GLY PRO HIS SEQRES 28 B 467 ARG SER THR PRO GLU SER ARG ALA ALA VAL GLN GLU LEU SEQRES 29 B 467 SER SER SER ILE LEU ALA GLY GLU ASP PRO GLU GLU ARG SEQRES 30 B 467 GLY VAL LYS LEU GLY LEU GLY ASP PHE ILE PHE TYR SER SEQRES 31 B 467 VAL LEU VAL GLY LYS ALA SER ALA THR ALA SER GLY ASP SEQRES 32 B 467 TRP ASN THR THR ILE ALA CYS PHE VAL ALA ILE LEU ILE SEQRES 33 B 467 GLY LEU CYS LEU THR LEU LEU LEU LEU ALA ILE PHE LYS SEQRES 34 B 467 LYS ALA LEU PRO ALA LEU PRO ILE SER ILE THR PHE GLY SEQRES 35 B 467 LEU VAL PHE TYR PHE ALA THR ASP TYR LEU VAL GLN PRO SEQRES 36 B 467 PHE MET ASP GLN LEU ALA PHE HIS GLN PHE TYR ILE SEQRES 1 C 257 MET THR ALA ALA VAL PHE PHE GLY CYS ALA PHE ILE ALA SEQRES 2 C 257 PHE GLY PRO ALA LEU ALA LEU TYR VAL PHE THR ILE ALA SEQRES 3 C 257 THR GLU PRO LEU ARG ILE ILE PHE LEU ILE ALA GLY ALA SEQRES 4 C 257 PHE PHE TRP LEU VAL SER LEU LEU ILE SER SER LEU VAL SEQRES 5 C 257 TRP PHE MET ALA ARG VAL ILE ILE ASP ASN LYS ASP GLY SEQRES 6 C 257 PRO THR GLN LYS TYR LEU LEU ILE PHE GLY ALA PHE VAL SEQRES 7 C 257 SER VAL TYR ILE GLN GLU MET PHE ARG PHE ALA TYR TYR SEQRES 8 C 257 LYS LEU LEU LYS LYS ALA SER GLU GLY LEU LYS SER ILE SEQRES 9 C 257 ASN PRO GLY GLU THR ALA PRO SER MET ARG LEU LEU ALA SEQRES 10 C 257 TYR VAL SER GLY LEU GLY PHE GLY ILE MET SER GLY VAL SEQRES 11 C 257 PHE SER PHE VAL ASN THR LEU SER ASP SER LEU GLY PRO SEQRES 12 C 257 GLY THR VAL GLY ILE HIS GLY ASP SER PRO GLN PHE PHE SEQRES 13 C 257 LEU TYR SER ALA PHE MET THR LEU VAL ILE ILE LEU LEU SEQRES 14 C 257 HIS VAL PHE TRP GLY ILE VAL PHE PHE ASP GLY CYS GLU SEQRES 15 C 257 LYS LYS LYS TRP GLY ILE LEU LEU ILE VAL LEU LEU THR SEQRES 16 C 257 HIS LEU LEU VAL SER ALA GLN THR PHE ILE SER SER TYR SEQRES 17 C 257 TYR GLY ILE ASN LEU ALA SER ALA PHE ILE ILE LEU VAL SEQRES 18 C 257 LEU MET GLY THR TRP ALA PHE LEU ALA ALA GLY GLY SER SEQRES 19 C 257 CYS ARG SER LEU LYS LEU CYS LEU LEU CYS GLN ASP LYS SEQRES 20 C 257 ASN PHE LEU LEU TYR ASN GLN ARG SER ARG SEQRES 1 D 101 MET ASN LEU GLU ARG VAL SER ASN GLU GLU LYS LEU ASN SEQRES 2 D 101 LEU CYS ARG LYS TYR TYR LEU GLY GLY PHE ALA PHE LEU SEQRES 3 D 101 PRO PHE LEU TRP LEU VAL ASN ILE PHE TRP PHE PHE ARG SEQRES 4 D 101 GLU ALA PHE LEU VAL PRO ALA TYR THR GLU GLN SER GLN SEQRES 5 D 101 ILE LYS GLY TYR VAL TRP ARG SER ALA VAL GLY PHE LEU SEQRES 6 D 101 PHE TRP VAL ILE VAL LEU THR SER TRP ILE THR ILE PHE SEQRES 7 D 101 GLN ILE TYR ARG PRO ARG TRP GLY ALA LEU GLY ASP TYR SEQRES 8 D 101 LEU SER PHE THR ILE PRO LEU GLY THR PRO HET NAG E 1 14 HET NAG E 2 14 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET NAG F 4 14 HET NAG G 1 14 HET NAG G 2 14 HET NAG H 1 14 HET NAG H 2 14 HET NAG A 801 14 HET NAG A 802 14 HET NAG A 803 14 HET NAG A 804 14 HET NAG A 805 14 HET NAG A 806 14 HET NAG A 807 14 HET PC1 A 808 31 HET PC1 B 501 46 HET PC1 C 301 31 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM PC1 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN PC1 3-SN-PHOSPHATIDYLCHOLINE FORMUL 5 NAG 16(C8 H15 N O6) FORMUL 6 BMA C6 H12 O6 FORMUL 16 PC1 3(C44 H88 N O8 P) HELIX 1 AA1 ASN A 34 ILE A 40 5 7 HELIX 2 AA2 LYS A 78 THR A 87 1 10 HELIX 3 AA3 THR A 104 ARG A 114 1 11 HELIX 4 AA4 GLY A 153 ALA A 157 5 5 HELIX 5 AA5 GLY A 170 TYR A 173 5 4 HELIX 6 AA6 ASP A 185 ASN A 200 1 16 HELIX 7 AA7 SER A 226 PHE A 240 1 15 HELIX 8 AA8 ALA A 298 LYS A 314 1 17 HELIX 9 AA9 ASP A 317 LEU A 321 5 5 HELIX 10 AB1 TYR A 337 LYS A 349 1 13 HELIX 11 AB2 GLN A 355 GLU A 357 5 3 HELIX 12 AB3 VAL A 383 LYS A 386 5 4 HELIX 13 AB4 ASN A 387 GLY A 407 1 21 HELIX 14 AB5 SER A 426 ARG A 432 1 7 HELIX 15 AB6 THR A 459 ASN A 464 5 6 HELIX 16 AB7 SER A 472 ASN A 478 1 7 HELIX 17 AB8 THR A 481 ALA A 502 1 22 HELIX 18 AB9 ASP A 514 ILE A 527 1 14 HELIX 19 AC1 ASN A 531 SER A 536 1 6 HELIX 20 AC2 ARG A 539 LEU A 546 5 8 HELIX 21 AC3 THR A 561 GLY A 576 1 16 HELIX 22 AC4 THR A 582 ASP A 588 1 7 HELIX 23 AC5 PRO A 589 VAL A 592 5 4 HELIX 24 AC6 SER A 632 LEU A 637 1 6 HELIX 25 AC7 SER A 665 LYS A 693 1 29 HELIX 26 AC8 LYS A 693 PHE A 698 1 6 HELIX 27 AC9 THR B 74 SER B 104 1 31 HELIX 28 AD1 VAL B 161 ASN B 190 1 30 HELIX 29 AD2 TYR B 195 HIS B 214 1 20 HELIX 30 AD3 PRO B 218 LEU B 241 1 24 HELIX 31 AD4 PRO B 242 TRP B 244 5 3 HELIX 32 AD5 THR B 245 TYR B 256 1 12 HELIX 33 AD6 GLY B 384 ALA B 398 1 15 HELIX 34 AD7 TRP B 404 PHE B 428 1 25 HELIX 35 AD8 PRO B 436 HIS B 463 1 28 HELIX 36 AD9 ALA C 3 ILE C 25 1 23 HELIX 37 AE1 GLU C 28 ASP C 61 1 34 HELIX 38 AE2 ASP C 64 GLY C 100 1 37 HELIX 39 AE3 SER C 112 SER C 138 1 27 HELIX 40 AE4 ASP C 139 LEU C 141 5 3 HELIX 41 AE5 GLN C 154 LYS C 183 1 30 HELIX 42 AE6 LYS C 185 SER C 206 1 22 HELIX 43 AE7 TYR C 208 ALA C 231 1 24 HELIX 44 AE8 SER D 7 GLY D 22 1 16 HELIX 45 AE9 LEU D 26 PHE D 42 1 17 HELIX 46 AF1 GLU D 49 ARG D 82 1 34 HELIX 47 AF2 PRO D 83 TRP D 85 5 3 HELIX 48 AF3 GLY D 86 LEU D 92 1 7 SHEET 1 AA1 8 ILE A 42 PRO A 43 0 SHEET 2 AA1 8 ALA A 658 ILE A 663 -1 O ILE A 660 N ILE A 42 SHEET 3 AA1 8 LEU A 212 LEU A 217 -1 N ALA A 214 O PHE A 661 SHEET 4 AA1 8 ASP A 69 ILE A 73 -1 N ASP A 69 O LEU A 217 SHEET 5 AA1 8 TYR A 94 GLU A 99 1 O MET A 95 N VAL A 72 SHEET 6 AA1 8 GLY A 120 SER A 124 1 O ALA A 122 N VAL A 96 SHEET 7 AA1 8 ILE A 180 LEU A 183 1 O PHE A 181 N VAL A 123 SHEET 8 AA1 8 THR A 47 PRO A 49 -1 N ALA A 48 O LEU A 182 SHEET 1 AA2 5 ASP A 175 PHE A 176 0 SHEET 2 AA2 5 GLN A 59 CYS A 62 1 N GLY A 61 O PHE A 176 SHEET 3 AA2 5 LEU A 53 LEU A 54 -1 N LEU A 53 O ILE A 60 SHEET 4 AA2 5 THR A 649 SER A 651 -1 O THR A 649 N LEU A 54 SHEET 5 AA2 5 CYS A 248 PRO A 250 -1 N ASP A 249 O GLU A 650 SHEET 1 AA3 8 ILE A 412 ARG A 414 0 SHEET 2 AA3 8 GLU A 375 HIS A 379 1 N LEU A 376 O ILE A 412 SHEET 3 AA3 8 GLY A 438 ALA A 442 -1 O ALA A 442 N TRP A 377 SHEET 4 AA3 8 VAL A 359 LEU A 365 1 N GLU A 364 O LEU A 441 SHEET 5 AA3 8 VAL A 275 ARG A 281 1 N VAL A 275 O ASP A 360 SHEET 6 AA3 8 ASN A 324 PHE A 330 1 O PHE A 330 N THR A 280 SHEET 7 AA3 8 ASP A 253 MET A 259 -1 N VAL A 256 O PHE A 329 SHEET 8 AA3 8 ARG A 626 ALA A 630 -1 O ALA A 628 N ASN A 255 SHEET 1 AA4 3 THR A 577 VAL A 579 0 SHEET 2 AA4 3 ARG A 619 SER A 623 -1 O ARG A 622 N THR A 577 SHEET 3 AA4 3 GLU A 601 VAL A 605 -1 N GLU A 601 O SER A 623 SHEET 1 AA5 2 VAL B 193 ASP B 194 0 SHEET 2 AA5 2 SER D 93 PHE D 94 -1 O PHE D 94 N VAL B 193 SSBOND 1 CYS A 50 CYS A 62 1555 1555 2.03 SSBOND 2 CYS A 140 CYS A 159 1555 1555 2.03 SSBOND 3 CYS A 195 CYS A 213 1555 1555 2.04 SSBOND 4 CYS A 230 CYS A 248 1555 1555 2.03 SSBOND 5 CYS A 586 CYS A 620 1555 1555 2.03 LINK ND2 ASN A 45 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN A 55 C1 NAG F 1 1555 1555 1.43 LINK ND2 ASN A 187 C1 NAG A 803 1555 1555 1.45 LINK ND2 ASN A 264 C1 NAG A 804 1555 1555 1.44 LINK ND2 ASN A 387 C1 NAG A 801 1555 1555 1.44 LINK ND2 ASN A 435 C1 NAG A 807 1555 1555 1.44 LINK ND2 ASN A 464 C1 NAG A 805 1555 1555 1.44 LINK ND2 ASN A 530 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 562 C1 NAG A 802 1555 1555 1.44 LINK ND2 ASN A 573 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN A 580 C1 NAG A 806 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.46 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.43 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O4 BMA F 3 C1 NAG F 4 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 CISPEP 1 SER A 559 PRO A 560 0 -8.14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000