HEADER MEMBRANE PROTEIN 17-APR-23 8OS0 TITLE SOLUTION NMR STRUCTURE OF NOTCH3 WT TMD COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOTCH 3 EXTRACELLULAR TRUNCATION; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606 KEYWDS NOTCH3 WT, GAMMA SECRETASE, TRANSMEMBRANE, MEMBRANE PROTEIN EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR N.GUSCHTSCHIN-SCHMIDT,C.MUHLE-GOLL REVDAT 2 23-AUG-23 8OS0 1 JRNL REVDAT 1 16-AUG-23 8OS0 0 JRNL AUTH M.ORTNER,N.GUSCHTSCHIN-SCHMIDT,W.STELZER,C.MUHLE-GOLL, JRNL AUTH 2 D.LANGOSCH JRNL TITL PERMISSIVE CONFORMATIONS OF A TRANSMEMBRANE HELIX ALLOW JRNL TITL 2 INTRAMEMBRANE PROTEOLYSIS BY GAMMA-SECRETASE. JRNL REF J.MOL.BIOL. V. 435 68218 2023 JRNL REFN ESSN 1089-8638 JRNL PMID 37536392 JRNL DOI 10.1016/J.JMB.2023.168218 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2.1 REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8OS0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-APR-23. REMARK 100 THE DEPOSITION ID IS D_1292129891. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 BAR REMARK 210 SAMPLE CONTENTS : 500 UM NOTCH3 WT TMD, REMARK 210 TRIFLUOROETHANOL/WATER 80/20 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY; REMARK 210 2D 1H-13C HSQC; 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA 2.3.2, CCPNMR ANALYSIS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 400 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 7 LYS A1640 -84.14 61.84 REMARK 500 8 LYS A1640 -159.33 -114.70 REMARK 500 11 LYS A1640 49.37 -98.56 REMARK 500 13 LYS A1640 -56.08 -144.94 REMARK 500 16 LYS A1640 -168.81 -127.36 REMARK 500 18 LYS A1640 16.31 -168.74 REMARK 500 19 PRO A1642 151.14 -49.51 REMARK 500 19 LEU A1644 -50.82 -167.24 REMARK 500 20 LYS A1640 31.53 -87.67 REMARK 500 22 LYS A1640 -34.71 -133.41 REMARK 500 27 LYS A1640 -0.79 -157.57 REMARK 500 31 LYS A1640 76.73 -165.46 REMARK 500 32 LYS A1640 -88.29 55.70 REMARK 500 34 LEU A1644 -58.02 -161.80 REMARK 500 35 LYS A1640 36.09 -94.46 REMARK 500 37 LYS A1640 -45.85 -133.31 REMARK 500 38 LYS A1640 -37.68 -150.79 REMARK 500 38 PRO A1645 -18.99 -49.84 REMARK 500 39 LYS A1640 157.67 63.67 REMARK 500 40 LYS A1640 109.49 61.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34808 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF NOTCH3 WT TMD DBREF 8OS0 A 1642 1665 UNP Q9UM47 NOTC3_HUMAN 1642 1665 SEQADV 8OS0 LYS A 1639 UNP Q9UM47 EXPRESSION TAG SEQADV 8OS0 LYS A 1640 UNP Q9UM47 EXPRESSION TAG SEQADV 8OS0 LYS A 1641 UNP Q9UM47 EXPRESSION TAG SEQADV 8OS0 LYS A 1666 UNP Q9UM47 EXPRESSION TAG SEQADV 8OS0 LYS A 1667 UNP Q9UM47 EXPRESSION TAG SEQADV 8OS0 LYS A 1668 UNP Q9UM47 EXPRESSION TAG SEQRES 1 A 30 LYS LYS LYS PRO LEU LEU PRO LEU LEU VAL ALA GLY ALA SEQRES 2 A 30 VAL LEU LEU LEU VAL ILE LEU VAL LEU GLY VAL MET VAL SEQRES 3 A 30 ALA LYS LYS LYS HELIX 1 AA1 LEU A 1643 ILE A 1657 1 15 HELIX 2 AA2 ILE A 1657 LYS A 1668 1 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1