HEADER LIPID BINDING PROTEIN 09-MAY-23 8OZZ TITLE PH DOMAIN OF AKT-LIKE KINASE IN TRYPANOSOMA CRUZI COMPND MOL_ID: 1; COMPND 2 MOLECULE: PH DOMAIN OF AKT-LIKE KINASE IN TRYPANOSOMA CRUZI; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI; SOURCE 3 ORGANISM_TAXID: 5693; SOURCE 4 GENE: TC00.1047053509047.110; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PH DOMAIN, AKT-LIKE/RAC/PKB, KINASE, TRYPANOSOMA CRUZI, LIPID BINDING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR K.A.STADLER,L.J.ORTIZ-JOYA,K.ZANGGER,N.GUBENSAEK REVDAT 1 08-MAY-24 8OZZ 0 JRNL AUTH K.A.STADLER,L.J.ORTIZ-JOYA,A.SINGH SAHRAWAT,C.BUHLHELLER, JRNL AUTH 2 K.GRUBER,T.PAVKOV-KELLER,T.B.O'HAGAN,A.GUARNE,S.PULIDO, JRNL AUTH 3 M.MARIN-VILLA,K.ZANGGER,N.GUBENSAK JRNL TITL STRUCTURAL INVESTIGATION OF TRYPANOSOMA CRUZI AKT-LIKE JRNL TITL 2 KINASE AS DRUG TARGET AGAINST CHAGAS DISEASE. JRNL REF SCI REP V. 14 10039 2024 JRNL REFN ESSN 2045-2322 JRNL PMID 38693166 JRNL DOI 10.1038/S41598-024-59654-8 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CS-ROSETTA, CS-ROSETTA REMARK 3 AUTHORS : SHEN, VERNON, BAKER AND BAX (CS-ROSETTA), SHEN, REMARK 3 VERNON, BAKER AND BAX (CS-ROSETTA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: FRAGMENT SELECTION AND FULL-ATOM REMARK 3 RELAXATION REMARK 4 REMARK 4 8OZZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292126731. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100,08 REMARK 210 PRESSURE : 1,01325 BAR REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-13C; U-15N] PH DOMAIN REMARK 210 OF AKT-LIKE KINASE IN REMARK 210 TRYPANOSOMA CRUZI, 50 MM KPI, REMARK 210 100 MM NACL, 90% H2O/10% D2O; REMARK 210 0.46 MM [U-13C; U-15N] PH DOMAIN REMARK 210 OF AKT-LIKE KINASE IN REMARK 210 TRYPANOSOMA CRUZI, 50 MM KPI, REMARK 210 100 MM NACL, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCA; 3D HNCO; 3D HN(CO)CA; REMARK 210 3D HN(CA)CO; 3D HN(COCA)CB; 3D REMARK 210 HNCACB; 3D H(CCO)NH; 3D HCCH- REMARK 210 TOCSY; 3D 1H-13C NOESY; 2D 1H- REMARK 210 13C HSQC; 3D 1H-15N NOESY; 2D 1H- REMARK 210 15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS 2.4.2., NMRPIPE, REMARK 210 TOPSPIN REMARK 210 METHOD USED : NA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 HIS A 109 REMARK 465 HIS A 110 REMARK 465 HIS A 111 REMARK 465 HIS A 112 REMARK 465 HIS A 113 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 2 ARG A 37 -168.29 -121.24 REMARK 500 3 ASP A 72 -135.86 48.92 REMARK 500 3 LYS A 76 -117.54 50.74 REMARK 500 4 TYR A 17 19.62 59.92 REMARK 500 4 ASP A 63 81.00 -155.79 REMARK 500 5 ARG A 28 73.01 -104.87 REMARK 500 5 ASP A 72 -118.50 53.14 REMARK 500 5 LYS A 76 -138.95 50.91 REMARK 500 6 VAL A 44 54.63 23.32 REMARK 500 7 ASP A 72 -132.62 49.26 REMARK 500 7 LYS A 76 -129.84 45.92 REMARK 500 8 PRO A 46 170.44 -53.28 REMARK 500 8 ASP A 63 93.73 -160.87 REMARK 500 9 SER A 45 76.41 -150.24 REMARK 500 9 ASP A 72 -137.77 53.12 REMARK 500 9 LYS A 76 -128.37 52.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 52088 RELATED DB: BMRB DBREF 8OZZ A 2 105 UNP Q4D6D3 Q4D6D3_TRYCC 2 105 SEQADV 8OZZ MET A 0 UNP Q4D6D3 INITIATING METHIONINE SEQADV 8OZZ GLY A 1 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ LEU A 106 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ GLU A 107 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 108 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 109 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 110 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 111 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 112 UNP Q4D6D3 EXPRESSION TAG SEQADV 8OZZ HIS A 113 UNP Q4D6D3 EXPRESSION TAG SEQRES 1 A 114 MET GLY SER VAL GLU TYR SER GLY TYR LEU GLN LYS THR SEQRES 2 A 114 GLY GLY LYS PHE TYR LYS LYS ASN GLN THR ARG TYR PHE SEQRES 3 A 114 GLU LEU ARG GLY PRO MET LEU CYS TYR TRP LYS ARG ARG SEQRES 4 A 114 PRO SER GLY PRO HIS VAL SER PRO THR GLY THR ILE ASP SEQRES 5 A 114 LEU THR ASN ALA ARG PHE VAL GLU ASN PRO LYS ASP PRO SEQRES 6 A 114 ARG SER TRP THR ILE GLU GLY ASP HIS LEU SER LYS THR SEQRES 7 A 114 PHE THR LEU THR ALA ASP THR GLU GLU GLN ARG GLU ALA SEQRES 8 A 114 TRP VAL ARG GLU MET SER LYS VAL LYS PRO GLU ASN ARG SEQRES 9 A 114 GLU GLN LEU GLU HIS HIS HIS HIS HIS HIS HELIX 1 AA1 THR A 84 VAL A 98 1 15 SHEET 1 AA1 4 TYR A 5 GLY A 13 0 SHEET 2 AA1 4 LYS A 19 ARG A 28 -1 O LEU A 27 N TYR A 5 SHEET 3 AA1 4 MET A 31 TRP A 35 -1 O CYS A 33 N GLU A 26 SHEET 4 AA1 4 GLY A 48 ASP A 51 -1 O ILE A 50 N LEU A 32 SHEET 1 AA2 3 ARG A 56 ASN A 60 0 SHEET 2 AA2 3 ASP A 63 GLU A 70 -1 O GLU A 70 N ARG A 56 SHEET 3 AA2 3 PHE A 78 THR A 81 -1 O PHE A 78 N ILE A 69 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 1773 HIS A 108 ENDMDL MODEL 2 TER 1773 HIS A 108 ENDMDL MODEL 3 TER 1773 HIS A 108 ENDMDL MODEL 4 TER 1773 HIS A 108 ENDMDL MODEL 5 TER 1773 HIS A 108 ENDMDL MODEL 6 TER 1773 HIS A 108 ENDMDL MODEL 7 TER 1773 HIS A 108 ENDMDL MODEL 8 TER 1773 HIS A 108 ENDMDL MODEL 9 TER 1773 HIS A 108 ENDMDL MODEL 10 TER 1773 HIS A 108 ENDMDL MASTER 136 0 0 1 7 0 0 6 900 1 0 9 END