HEADER HYDROLASE 10-MAY-23 8P0I TITLE CRYSTAL STRUCTURE OF THE OPEN CONFORMATION OF INSULIN-REGULATED TITLE 2 AMINOPEPTIDASE IN COMPLEX WITH A SMALL-MW INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEUCYL-CYSTINYL AMINOPEPTIDASE, PREGNANCY SERUM FORM; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LNPEP, OTASE; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS INSULIN REGULATED AMINOPEPTIDASE, IRAP, HSPLAP, ANTIGEN PRESENTATION, KEYWDS 2 INHIBITOR, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.MPAKALI,P.GIASTAS,E.STRATIKOS REVDAT 1 04-SEP-24 8P0I 0 JRNL AUTH A.MPAKALI,G.GEORGAKI,A.BUSON,A.D.FINDLAY,J.S.FOOT, JRNL AUTH 2 F.X.MAUVAIS,P.VAN ENDERT,P.GIASTAS,D.W.HAMPRECHT,E.STRATIKOS JRNL TITL STABILIZATION OF THE OPEN CONFORMATION OMICRON F JRNL TITL 2 INSULIN-REGULATED AMINOPEPTIDASE BY A NOVEL JRNL TITL 3 SUBSTRATE-SELECTIVE SMALL-MOLECULE INHIBITOR. JRNL REF PROTEIN SCI. V. 33 E5151 2024 JRNL REFN ESSN 1469-896X JRNL PMID 39167040 JRNL DOI 10.1002/PRO.5151 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 29554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1689 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.6250 - 3.5000 1.00 2970 166 0.3689 0.3947 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 117.9 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 117.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 14271 REMARK 3 ANGLE : 1.092 19458 REMARK 3 CHIRALITY : 0.064 2336 REMARK 3 PLANARITY : 0.007 2384 REMARK 3 DIHEDRAL : 15.672 4954 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P0I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292130391. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-AUG-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976260 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29554 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 64.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.07566 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.82330 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.090 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SPG BUFFER (SUCCINIC ACID, REMARK 280 PHOSPHATE, GLYCINE), PH 9.0 AND 25% (W/V) POLYETHYLENE GLYCOL REMARK 280 (PEG), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 127.56050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 155 REMARK 465 THR A 156 REMARK 465 ASN A 157 REMARK 465 GLY A 158 REMARK 465 LYS A 159 REMARK 465 MET A 639 REMARK 465 LYS A 640 REMARK 465 PRO A 641 REMARK 465 GLU A 642 REMARK 465 ILE A 643 REMARK 465 GLN A 644 REMARK 465 PRO A 645 REMARK 465 SER A 646 REMARK 465 ASP A 647 REMARK 465 ALA B 155 REMARK 465 THR B 156 REMARK 465 ASN B 157 REMARK 465 GLY B 158 REMARK 465 LYS B 159 REMARK 465 LEU B 160 REMARK 465 MET B 222 REMARK 465 SER B 223 REMARK 465 ALA B 224 REMARK 465 VAL B 225 REMARK 465 SER B 226 REMARK 465 GLN B 228 REMARK 465 MET B 639 REMARK 465 LYS B 640 REMARK 465 PRO B 641 REMARK 465 GLU B 642 REMARK 465 ILE B 643 REMARK 465 GLN B 644 REMARK 465 PRO B 645 REMARK 465 SER B 646 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 160 CG CD1 CD2 REMARK 470 ARG A 176 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 ILE A 196 CG1 CG2 CD1 REMARK 470 GLN A 228 CG CD OE1 NE2 REMARK 470 GLU A 229 CG CD OE1 OE2 REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 GLU A 249 CG CD OE1 OE2 REMARK 470 LEU A 259 CG CD1 CD2 REMARK 470 ILE A 261 CG1 CG2 CD1 REMARK 470 GLU A 262 CG CD OE1 OE2 REMARK 470 ASN A 284 CG OD1 ND2 REMARK 470 LEU A 297 CG CD1 CD2 REMARK 470 LYS A 312 CG CD CE NZ REMARK 470 GLU A 323 CG CD OE1 OE2 REMARK 470 LYS A 333 CG CD CE NZ REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 LEU A 339 CG CD1 CD2 REMARK 470 GLU A 347 CG CD OE1 OE2 REMARK 470 LYS A 367 CG CD CE NZ REMARK 470 ASP A 372 CG OD1 OD2 REMARK 470 LYS A 386 CG CD CE NZ REMARK 470 PHE A 404 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 411 CG CD OE1 NE2 REMARK 470 LYS A 415 CG CD CE NZ REMARK 470 PHE A 425 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 439 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 441 CG CD OE1 OE2 REMARK 470 LYS A 478 CG CD CE NZ REMARK 470 GLN A 535 CG CD OE1 NE2 REMARK 470 GLU A 538 CG CD OE1 OE2 REMARK 470 ASP A 545 CG OD1 OD2 REMARK 470 LEU A 547 CG CD1 CD2 REMARK 470 LYS A 551 CG CD CE NZ REMARK 470 THR A 597 OG1 CG2 REMARK 470 GLN A 599 CG CD OE1 NE2 REMARK 470 LEU A 601 CG CD1 CD2 REMARK 470 ASP A 602 CG OD1 OD2 REMARK 470 LYS A 604 CG CD CE NZ REMARK 470 ARG A 605 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 608 CG CD CE NZ REMARK 470 LYS A 623 CG CD CE NZ REMARK 470 LYS A 624 CG CD CE NZ REMARK 470 LYS A 626 CG CD CE NZ REMARK 470 GLN A 631 CG CD OE1 NE2 REMARK 470 PHE A 636 CG CD1 CD2 CE1 CE2 CZ REMARK 470 THR A 648 OG1 CG2 REMARK 470 ASN A 664 CG OD1 ND2 REMARK 470 LYS A 667 CG CD CE NZ REMARK 470 LYS A 676 CG CD CE NZ REMARK 470 GLU A 686 CG CD OE1 OE2 REMARK 470 LYS A 691 CG CD CE NZ REMARK 470 ASP A 707 CG OD1 OD2 REMARK 470 LYS A 717 CG CD CE NZ REMARK 470 LEU A 741 CG CD1 CD2 REMARK 470 LYS A 747 CG CD CE NZ REMARK 470 GLU A 811 CG CD OE1 OE2 REMARK 470 GLU A 825 CG CD OE1 OE2 REMARK 470 LYS A 869 CG CD CE NZ REMARK 470 LYS A 911 CG CD CE NZ REMARK 470 LYS A 951 CG CD CE NZ REMARK 470 LYS A 977 CG CD CE NZ REMARK 470 GLU A 992 CG CD OE1 OE2 REMARK 470 GLU A1002 CG CD OE1 OE2 REMARK 470 GLU A1005 CG CD OE1 OE2 REMARK 470 LYS A1016 CG CD CE NZ REMARK 470 LYS A1019 CG CD CE NZ REMARK 470 ARG B 176 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 178 CG CD OE1 OE2 REMARK 470 ARG B 191 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 199 CG CD OE1 NE2 REMARK 470 HIS B 214 CG ND1 CD2 CE1 NE2 REMARK 470 ARG B 218 CG CD NE CZ NH1 NH2 REMARK 470 SER B 227 OG REMARK 470 GLU B 229 CG CD OE1 OE2 REMARK 470 LYS B 230 CG CD CE NZ REMARK 470 GLN B 231 CG CD OE1 NE2 REMARK 470 ILE B 245 CG1 CG2 CD1 REMARK 470 GLU B 249 CG CD OE1 OE2 REMARK 470 GLU B 282 CG CD OE1 OE2 REMARK 470 ASN B 284 CG OD1 ND2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 LYS B 286 CG CD CE NZ REMARK 470 LYS B 312 CG CD CE NZ REMARK 470 LYS B 318 CG CD CE NZ REMARK 470 ARG B 321 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 323 CG CD OE1 OE2 REMARK 470 GLN B 324 CG CD OE1 NE2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 GLU B 350 CG CD OE1 OE2 REMARK 470 LYS B 353 CG CD CE NZ REMARK 470 GLU B 365 CG CD OE1 OE2 REMARK 470 MET B 366 CG SD CE REMARK 470 LYS B 367 CG CD CE NZ REMARK 470 ASP B 372 CG OD1 OD2 REMARK 470 GLU B 385 CG CD OE1 OE2 REMARK 470 ILE B 387 CG1 CG2 CD1 REMARK 470 LYS B 399 CG CD CE NZ REMARK 470 ASN B 406 CG OD1 ND2 REMARK 470 LYS B 517 CG CD CE NZ REMARK 470 LYS B 521 CG CD CE NZ REMARK 470 ASN B 598 CG OD1 ND2 REMARK 470 GLN B 599 CG CD OE1 NE2 REMARK 470 LYS B 604 CG CD CE NZ REMARK 470 LYS B 608 CG CD CE NZ REMARK 470 GLN B 622 CG CD OE1 NE2 REMARK 470 LYS B 624 CG CD CE NZ REMARK 470 LYS B 626 CG CD CE NZ REMARK 470 ASN B 638 CG OD1 ND2 REMARK 470 ASP B 647 CG OD1 OD2 REMARK 470 THR B 648 OG1 CG2 REMARK 470 ASN B 664 CG OD1 ND2 REMARK 470 TYR B 665 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 667 CG CD CE NZ REMARK 470 LYS B 676 CG CD CE NZ REMARK 470 LYS B 677 CG CD CE NZ REMARK 470 GLU B 685 CG CD OE1 OE2 REMARK 470 LYS B 717 CG CD CE NZ REMARK 470 LYS B 726 CG CD CE NZ REMARK 470 LYS B 747 CG CD CE NZ REMARK 470 LYS B 781 CG CD CE NZ REMARK 470 ARG B 790 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 794 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 797 CG CD CE NZ REMARK 470 GLN B 804 CG CD OE1 NE2 REMARK 470 GLN B 805 CG CD OE1 NE2 REMARK 470 GLU B 811 CG CD OE1 OE2 REMARK 470 GLU B 825 CG CD OE1 OE2 REMARK 470 ASP B 871 CG OD1 OD2 REMARK 470 GLU B 901 CG CD OE1 OE2 REMARK 470 LYS B 911 CG CD CE NZ REMARK 470 ARG B 920 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 947 CG CD OE1 OE2 REMARK 470 LYS B 951 CG CD CE NZ REMARK 470 GLN B 964 CG CD OE1 NE2 REMARK 470 LYS B 977 CG CD CE NZ REMARK 470 GLU B1005 CG CD OE1 OE2 REMARK 470 GLU B1015 CG CD OE1 OE2 REMARK 470 LYS B1016 CG CD CE NZ REMARK 470 LYS B1019 CG CD CE NZ REMARK 470 TRP B1023 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B1023 CZ3 CH2 REMARK 470 LEU B1025 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 256 O5 NAG A 1109 2.16 REMARK 500 C4 NAG F 1 C1 NAG F 2 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 483 CB - CG - CD2 ANGL. DEV. = -12.6 DEGREES REMARK 500 LEU A 651 CD1 - CG - CD2 ANGL. DEV. = -23.5 DEGREES REMARK 500 VAL B 173 CG1 - CB - CG2 ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 171 -75.33 -88.19 REMARK 500 LEU A 185 -62.03 67.40 REMARK 500 SER A 211 113.99 -169.72 REMARK 500 ALA A 224 -1.81 71.07 REMARK 500 ALA A 238 -30.87 72.82 REMARK 500 ALA A 291 -167.26 -170.87 REMARK 500 LEU A 297 71.13 60.55 REMARK 500 ALA A 302 -120.26 63.18 REMARK 500 CYS A 305 -175.48 -176.82 REMARK 500 LYS A 334 -77.72 -120.90 REMARK 500 GLN A 371 67.64 -163.67 REMARK 500 LYS A 386 -111.50 -104.69 REMARK 500 VAL A 390 60.13 -103.25 REMARK 500 ALA A 421 76.96 -156.50 REMARK 500 MET A 430 -169.88 -116.42 REMARK 500 GLU A 431 26.73 -147.00 REMARK 500 GLU A 441 -15.25 93.69 REMARK 500 THR A 449 -58.57 74.64 REMARK 500 TRP A 470 -86.16 -80.46 REMARK 500 LEU A 474 -80.89 -67.01 REMARK 500 PHE A 502 55.55 -90.18 REMARK 500 SER A 523 42.73 -76.91 REMARK 500 TYR A 562 -81.27 -74.36 REMARK 500 LEU A 601 168.11 -45.31 REMARK 500 LEU A 651 174.42 71.07 REMARK 500 PRO A 655 75.00 -65.64 REMARK 500 ILE A 718 -80.24 -92.18 REMARK 500 THR A 852 58.10 -118.56 REMARK 500 SER A 883 -70.41 -109.95 REMARK 500 ASP A 917 -72.76 -64.25 REMARK 500 PHE A 919 -163.47 -118.17 REMARK 500 SER A 975 36.99 -159.76 REMARK 500 SER A 991 148.68 -174.89 REMARK 500 THR B 170 -20.18 93.37 REMARK 500 LEU B 175 -57.15 -147.74 REMARK 500 LEU B 185 -39.27 76.41 REMARK 500 HIS B 214 154.86 73.60 REMARK 500 ARG B 218 -74.54 -137.71 REMARK 500 ALA B 238 -41.55 74.32 REMARK 500 TYR B 271 57.44 -90.58 REMARK 500 ALA B 291 -158.27 -170.18 REMARK 500 PHE B 303 80.48 24.55 REMARK 500 PRO B 304 105.09 -54.62 REMARK 500 ASN B 330 -70.98 -63.40 REMARK 500 SER B 336 74.54 -111.24 REMARK 500 ASP B 340 45.08 -79.21 REMARK 500 GLN B 371 144.09 -171.57 REMARK 500 LEU B 414 162.19 171.52 REMARK 500 TYR B 445 90.30 -161.69 REMARK 500 LEU B 474 -99.32 61.55 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1108 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 464 NE2 REMARK 620 2 HIS A 468 NE2 82.1 REMARK 620 3 GLU A 487 OE1 85.7 77.9 REMARK 620 4 WC3 A1107 N26 104.7 168.3 111.7 REMARK 620 5 WC3 A1107 N28 153.3 116.8 80.7 60.4 REMARK 620 6 WC3 A1107 N34 166.3 87.3 83.6 87.2 31.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1108 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 464 NE2 REMARK 620 2 HIS B 468 NE2 92.6 REMARK 620 3 GLU B 487 OE2 94.0 89.1 REMARK 620 4 WC3 B1107 N26 122.6 144.1 94.7 REMARK 620 N 1 2 3 DBREF 8P0I A 155 1025 UNP Q9UIQ6 LCAP_HUMAN 155 1025 DBREF 8P0I B 155 1025 UNP Q9UIQ6 LCAP_HUMAN 155 1025 SEQRES 1 A 871 ALA THR ASN GLY LYS LEU PHE PRO TRP ALA GLN ILE ARG SEQRES 2 A 871 LEU PRO THR ALA VAL VAL PRO LEU ARG TYR GLU LEU SER SEQRES 3 A 871 LEU HIS PRO ASN LEU THR SER MET THR PHE ARG GLY SER SEQRES 4 A 871 VAL THR ILE SER VAL GLN ALA LEU GLN VAL THR TRP ASN SEQRES 5 A 871 ILE ILE LEU HIS SER THR GLY HIS ASN ILE SER ARG VAL SEQRES 6 A 871 THR PHE MET SER ALA VAL SER SER GLN GLU LYS GLN ALA SEQRES 7 A 871 GLU ILE LEU GLU TYR ALA TYR HIS GLY GLN ILE ALA ILE SEQRES 8 A 871 VAL ALA PRO GLU ALA LEU LEU ALA GLY HIS ASN TYR THR SEQRES 9 A 871 LEU LYS ILE GLU TYR SER ALA ASN ILE SER SER SER TYR SEQRES 10 A 871 TYR GLY PHE TYR GLY PHE SER TYR THR ASP GLU SER ASN SEQRES 11 A 871 GLU LYS LYS TYR PHE ALA ALA THR GLN PHE GLU PRO LEU SEQRES 12 A 871 ALA ALA ARG SER ALA PHE PRO CYS PHE ASP GLU PRO ALA SEQRES 13 A 871 PHE LYS ALA THR PHE ILE ILE LYS ILE ILE ARG ASP GLU SEQRES 14 A 871 GLN TYR THR ALA LEU SER ASN MET PRO LYS LYS SER SER SEQRES 15 A 871 VAL VAL LEU ASP ASP GLY LEU VAL GLN ASP GLU PHE SER SEQRES 16 A 871 GLU SER VAL LYS MET SER THR TYR LEU VAL ALA PHE ILE SEQRES 17 A 871 VAL GLY GLU MET LYS ASN LEU SER GLN ASP VAL ASN GLY SEQRES 18 A 871 THR LEU VAL SER ILE TYR ALA VAL PRO GLU LYS ILE GLY SEQRES 19 A 871 GLN VAL HIS TYR ALA LEU GLU THR THR VAL LYS LEU LEU SEQRES 20 A 871 GLU PHE PHE GLN ASN TYR PHE GLU ILE GLN TYR PRO LEU SEQRES 21 A 871 LYS LYS LEU ASP LEU VAL ALA ILE PRO ASP PHE GLU ALA SEQRES 22 A 871 GLY ALA MET GLU ASN TRP GLY LEU LEU THR PHE ARG GLU SEQRES 23 A 871 GLU THR LEU LEU TYR ASP SER ASN THR SER SER MET ALA SEQRES 24 A 871 ASP ARG LYS LEU VAL THR LYS ILE ILE ALA HIS GLU LEU SEQRES 25 A 871 ALA HIS GLN TRP PHE GLY ASN LEU VAL THR MET LYS TRP SEQRES 26 A 871 TRP ASN ASP LEU TRP LEU ASN GLU GLY PHE ALA THR PHE SEQRES 27 A 871 MET GLU TYR PHE SER LEU GLU LYS ILE PHE LYS GLU LEU SEQRES 28 A 871 SER SER TYR GLU ASP PHE LEU ASP ALA ARG PHE LYS THR SEQRES 29 A 871 MET LYS LYS ASP SER LEU ASN SER SER HIS PRO ILE SER SEQRES 30 A 871 SER SER VAL GLN SER SER GLU GLN ILE GLU GLU MET PHE SEQRES 31 A 871 ASP SER LEU SER TYR PHE LYS GLY SER SER LEU LEU LEU SEQRES 32 A 871 MET LEU LYS THR TYR LEU SER GLU ASP VAL PHE GLN HIS SEQRES 33 A 871 ALA VAL VAL LEU TYR LEU HIS ASN HIS SER TYR ALA SER SEQRES 34 A 871 ILE GLN SER ASP ASP LEU TRP ASP SER PHE ASN GLU VAL SEQRES 35 A 871 THR ASN GLN THR LEU ASP VAL LYS ARG MET MET LYS THR SEQRES 36 A 871 TRP THR LEU GLN LYS GLY PHE PRO LEU VAL THR VAL GLN SEQRES 37 A 871 LYS LYS GLY LYS GLU LEU PHE ILE GLN GLN GLU ARG PHE SEQRES 38 A 871 PHE LEU ASN MET LYS PRO GLU ILE GLN PRO SER ASP THR SEQRES 39 A 871 SER TYR LEU TRP HIS ILE PRO LEU SER TYR VAL THR GLU SEQRES 40 A 871 GLY ARG ASN TYR SER LYS TYR GLN SER VAL SER LEU LEU SEQRES 41 A 871 ASP LYS LYS SER GLY VAL ILE ASN LEU THR GLU GLU VAL SEQRES 42 A 871 LEU TRP VAL LYS VAL ASN ILE ASN MET ASN GLY TYR TYR SEQRES 43 A 871 ILE VAL HIS TYR ALA ASP ASP ASP TRP GLU ALA LEU ILE SEQRES 44 A 871 HIS GLN LEU LYS ILE ASN PRO TYR VAL LEU SER ASP LYS SEQRES 45 A 871 ASP ARG ALA ASN LEU ILE ASN ASN ILE PHE GLU LEU ALA SEQRES 46 A 871 GLY LEU GLY LYS VAL PRO LEU LYS ARG ALA PHE ASP LEU SEQRES 47 A 871 ILE ASN TYR LEU GLY ASN GLU ASN HIS THR ALA PRO ILE SEQRES 48 A 871 THR GLU ALA LEU PHE GLN THR ASP LEU ILE TYR ASN LEU SEQRES 49 A 871 LEU GLU LYS LEU GLY TYR MET ASP LEU ALA SER ARG LEU SEQRES 50 A 871 VAL THR ARG VAL PHE LYS LEU LEU GLN ASN GLN ILE GLN SEQRES 51 A 871 GLN GLN THR TRP THR ASP GLU GLY THR PRO SER MET ARG SEQRES 52 A 871 GLU LEU ARG SER ALA LEU LEU GLU PHE ALA CYS THR HIS SEQRES 53 A 871 ASN LEU GLY ASN CYS SER THR THR ALA MET LYS LEU PHE SEQRES 54 A 871 ASP ASP TRP MET ALA SER ASN GLY THR GLN SER LEU PRO SEQRES 55 A 871 THR ASP VAL MET THR THR VAL PHE LYS VAL GLY ALA LYS SEQRES 56 A 871 THR ASP LYS GLY TRP SER PHE LEU LEU GLY LYS TYR ILE SEQRES 57 A 871 SER ILE GLY SER GLU ALA GLU LYS ASN LYS ILE LEU GLU SEQRES 58 A 871 ALA LEU ALA SER SER GLU ASP VAL ARG LYS LEU TYR TRP SEQRES 59 A 871 LEU MET LYS SER SER LEU ASN GLY ASP ASN PHE ARG THR SEQRES 60 A 871 GLN LYS LEU SER PHE ILE ILE ARG THR VAL GLY ARG HIS SEQRES 61 A 871 PHE PRO GLY HIS LEU LEU ALA TRP ASP PHE VAL LYS GLU SEQRES 62 A 871 ASN TRP ASN LYS LEU VAL GLN LYS PHE PRO LEU GLY SER SEQRES 63 A 871 TYR THR ILE GLN ASN ILE VAL ALA GLY SER THR TYR LEU SEQRES 64 A 871 PHE SER THR LYS THR HIS LEU SER GLU VAL GLN ALA PHE SEQRES 65 A 871 PHE GLU ASN GLN SER GLU ALA THR PHE ARG LEU ARG CYS SEQRES 66 A 871 VAL GLN GLU ALA LEU GLU VAL ILE GLN LEU ASN ILE GLN SEQRES 67 A 871 TRP MET GLU LYS ASN LEU LYS SER LEU THR TRP TRP LEU SEQRES 1 B 871 ALA THR ASN GLY LYS LEU PHE PRO TRP ALA GLN ILE ARG SEQRES 2 B 871 LEU PRO THR ALA VAL VAL PRO LEU ARG TYR GLU LEU SER SEQRES 3 B 871 LEU HIS PRO ASN LEU THR SER MET THR PHE ARG GLY SER SEQRES 4 B 871 VAL THR ILE SER VAL GLN ALA LEU GLN VAL THR TRP ASN SEQRES 5 B 871 ILE ILE LEU HIS SER THR GLY HIS ASN ILE SER ARG VAL SEQRES 6 B 871 THR PHE MET SER ALA VAL SER SER GLN GLU LYS GLN ALA SEQRES 7 B 871 GLU ILE LEU GLU TYR ALA TYR HIS GLY GLN ILE ALA ILE SEQRES 8 B 871 VAL ALA PRO GLU ALA LEU LEU ALA GLY HIS ASN TYR THR SEQRES 9 B 871 LEU LYS ILE GLU TYR SER ALA ASN ILE SER SER SER TYR SEQRES 10 B 871 TYR GLY PHE TYR GLY PHE SER TYR THR ASP GLU SER ASN SEQRES 11 B 871 GLU LYS LYS TYR PHE ALA ALA THR GLN PHE GLU PRO LEU SEQRES 12 B 871 ALA ALA ARG SER ALA PHE PRO CYS PHE ASP GLU PRO ALA SEQRES 13 B 871 PHE LYS ALA THR PHE ILE ILE LYS ILE ILE ARG ASP GLU SEQRES 14 B 871 GLN TYR THR ALA LEU SER ASN MET PRO LYS LYS SER SER SEQRES 15 B 871 VAL VAL LEU ASP ASP GLY LEU VAL GLN ASP GLU PHE SER SEQRES 16 B 871 GLU SER VAL LYS MET SER THR TYR LEU VAL ALA PHE ILE SEQRES 17 B 871 VAL GLY GLU MET LYS ASN LEU SER GLN ASP VAL ASN GLY SEQRES 18 B 871 THR LEU VAL SER ILE TYR ALA VAL PRO GLU LYS ILE GLY SEQRES 19 B 871 GLN VAL HIS TYR ALA LEU GLU THR THR VAL LYS LEU LEU SEQRES 20 B 871 GLU PHE PHE GLN ASN TYR PHE GLU ILE GLN TYR PRO LEU SEQRES 21 B 871 LYS LYS LEU ASP LEU VAL ALA ILE PRO ASP PHE GLU ALA SEQRES 22 B 871 GLY ALA MET GLU ASN TRP GLY LEU LEU THR PHE ARG GLU SEQRES 23 B 871 GLU THR LEU LEU TYR ASP SER ASN THR SER SER MET ALA SEQRES 24 B 871 ASP ARG LYS LEU VAL THR LYS ILE ILE ALA HIS GLU LEU SEQRES 25 B 871 ALA HIS GLN TRP PHE GLY ASN LEU VAL THR MET LYS TRP SEQRES 26 B 871 TRP ASN ASP LEU TRP LEU ASN GLU GLY PHE ALA THR PHE SEQRES 27 B 871 MET GLU TYR PHE SER LEU GLU LYS ILE PHE LYS GLU LEU SEQRES 28 B 871 SER SER TYR GLU ASP PHE LEU ASP ALA ARG PHE LYS THR SEQRES 29 B 871 MET LYS LYS ASP SER LEU ASN SER SER HIS PRO ILE SER SEQRES 30 B 871 SER SER VAL GLN SER SER GLU GLN ILE GLU GLU MET PHE SEQRES 31 B 871 ASP SER LEU SER TYR PHE LYS GLY SER SER LEU LEU LEU SEQRES 32 B 871 MET LEU LYS THR TYR LEU SER GLU ASP VAL PHE GLN HIS SEQRES 33 B 871 ALA VAL VAL LEU TYR LEU HIS ASN HIS SER TYR ALA SER SEQRES 34 B 871 ILE GLN SER ASP ASP LEU TRP ASP SER PHE ASN GLU VAL SEQRES 35 B 871 THR ASN GLN THR LEU ASP VAL LYS ARG MET MET LYS THR SEQRES 36 B 871 TRP THR LEU GLN LYS GLY PHE PRO LEU VAL THR VAL GLN SEQRES 37 B 871 LYS LYS GLY LYS GLU LEU PHE ILE GLN GLN GLU ARG PHE SEQRES 38 B 871 PHE LEU ASN MET LYS PRO GLU ILE GLN PRO SER ASP THR SEQRES 39 B 871 SER TYR LEU TRP HIS ILE PRO LEU SER TYR VAL THR GLU SEQRES 40 B 871 GLY ARG ASN TYR SER LYS TYR GLN SER VAL SER LEU LEU SEQRES 41 B 871 ASP LYS LYS SER GLY VAL ILE ASN LEU THR GLU GLU VAL SEQRES 42 B 871 LEU TRP VAL LYS VAL ASN ILE ASN MET ASN GLY TYR TYR SEQRES 43 B 871 ILE VAL HIS TYR ALA ASP ASP ASP TRP GLU ALA LEU ILE SEQRES 44 B 871 HIS GLN LEU LYS ILE ASN PRO TYR VAL LEU SER ASP LYS SEQRES 45 B 871 ASP ARG ALA ASN LEU ILE ASN ASN ILE PHE GLU LEU ALA SEQRES 46 B 871 GLY LEU GLY LYS VAL PRO LEU LYS ARG ALA PHE ASP LEU SEQRES 47 B 871 ILE ASN TYR LEU GLY ASN GLU ASN HIS THR ALA PRO ILE SEQRES 48 B 871 THR GLU ALA LEU PHE GLN THR ASP LEU ILE TYR ASN LEU SEQRES 49 B 871 LEU GLU LYS LEU GLY TYR MET ASP LEU ALA SER ARG LEU SEQRES 50 B 871 VAL THR ARG VAL PHE LYS LEU LEU GLN ASN GLN ILE GLN SEQRES 51 B 871 GLN GLN THR TRP THR ASP GLU GLY THR PRO SER MET ARG SEQRES 52 B 871 GLU LEU ARG SER ALA LEU LEU GLU PHE ALA CYS THR HIS SEQRES 53 B 871 ASN LEU GLY ASN CYS SER THR THR ALA MET LYS LEU PHE SEQRES 54 B 871 ASP ASP TRP MET ALA SER ASN GLY THR GLN SER LEU PRO SEQRES 55 B 871 THR ASP VAL MET THR THR VAL PHE LYS VAL GLY ALA LYS SEQRES 56 B 871 THR ASP LYS GLY TRP SER PHE LEU LEU GLY LYS TYR ILE SEQRES 57 B 871 SER ILE GLY SER GLU ALA GLU LYS ASN LYS ILE LEU GLU SEQRES 58 B 871 ALA LEU ALA SER SER GLU ASP VAL ARG LYS LEU TYR TRP SEQRES 59 B 871 LEU MET LYS SER SER LEU ASN GLY ASP ASN PHE ARG THR SEQRES 60 B 871 GLN LYS LEU SER PHE ILE ILE ARG THR VAL GLY ARG HIS SEQRES 61 B 871 PHE PRO GLY HIS LEU LEU ALA TRP ASP PHE VAL LYS GLU SEQRES 62 B 871 ASN TRP ASN LYS LEU VAL GLN LYS PHE PRO LEU GLY SER SEQRES 63 B 871 TYR THR ILE GLN ASN ILE VAL ALA GLY SER THR TYR LEU SEQRES 64 B 871 PHE SER THR LYS THR HIS LEU SER GLU VAL GLN ALA PHE SEQRES 65 B 871 PHE GLU ASN GLN SER GLU ALA THR PHE ARG LEU ARG CYS SEQRES 66 B 871 VAL GLN GLU ALA LEU GLU VAL ILE GLN LEU ASN ILE GLN SEQRES 67 B 871 TRP MET GLU LYS ASN LEU LYS SER LEU THR TRP TRP LEU HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET NAG L 1 14 HET NAG L 2 14 HET NAG A1101 14 HET NAG A1102 14 HET NAG A1103 14 HET NAG A1104 14 HET NAG A1105 14 HET NAG A1106 14 HET WC3 A1107 63 HET ZN A1108 1 HET NAG A1109 14 HET NAG B1101 14 HET NAG B1102 14 HET NAG B1103 14 HET NAG B1104 14 HET NAG B1105 14 HET NAG B1106 14 HET WC3 B1107 63 HET ZN B1108 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM WC3 2-[2-(3,5-DIMETHYLPYRAZOL-1-YL)-6-(4-METHOXYPHENYL) HETNAM 2 WC3 PYRIMIDIN-4-YL]OXY-N-METHYL-N-[(2-METHYLPYRIDIN-3-YL) HETNAM 3 WC3 METHYL]ETHANAMIDE HETNAM ZN ZINC ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 33(C8 H15 N O6) FORMUL 3 BMA 6(C6 H12 O6) FORMUL 4 MAN 2(C6 H12 O6) FORMUL 19 WC3 2(C26 H28 N6 O3) FORMUL 20 ZN 2(ZN 2+) HELIX 1 AA1 ASP A 340 GLY A 342 5 3 HELIX 2 AA2 SER A 355 VAL A 359 5 5 HELIX 3 AA3 HIS A 391 GLU A 409 1 19 HELIX 4 AA4 SER A 451 GLN A 469 1 19 HELIX 5 AA5 TRP A 479 ASN A 481 5 3 HELIX 6 AA6 ASP A 482 ILE A 501 1 20 HELIX 7 AA7 PHE A 502 SER A 506 5 5 HELIX 8 AA8 SER A 507 SER A 523 1 17 HELIX 9 AA9 SER A 536 MET A 543 1 8 HELIX 10 AB1 ASP A 545 LEU A 563 1 19 HELIX 11 AB2 SER A 564 SER A 580 1 17 HELIX 12 AB3 GLN A 585 THR A 597 1 13 HELIX 13 AB4 LYS A 604 LEU A 612 1 9 HELIX 14 AB5 ILE A 694 ASN A 697 5 4 HELIX 15 AB6 ALA A 705 ASN A 719 1 15 HELIX 16 AB7 PRO A 720 LEU A 723 5 4 HELIX 17 AB8 SER A 724 GLY A 740 1 17 HELIX 18 AB9 LEU A 746 ASN A 754 1 9 HELIX 19 AC1 TYR A 755 GLU A 759 5 5 HELIX 20 AC2 HIS A 761 GLY A 783 1 23 HELIX 21 AC3 TYR A 784 GLN A 806 1 23 HELIX 22 AC4 THR A 813 HIS A 830 1 18 HELIX 23 AC5 ASN A 834 SER A 849 1 16 HELIX 24 AC6 PRO A 856 ASP A 858 5 3 HELIX 25 AC7 VAL A 859 LYS A 869 1 11 HELIX 26 AC8 THR A 870 ILE A 882 1 13 HELIX 27 AC9 SER A 886 ALA A 898 1 13 HELIX 28 AD1 ASP A 902 GLY A 916 1 15 HELIX 29 AD2 ARG A 920 GLN A 922 5 3 HELIX 30 AD3 LYS A 923 HIS A 934 1 12 HELIX 31 AD4 GLY A 937 ASN A 948 1 12 HELIX 32 AD5 ASN A 948 LYS A 955 1 8 HELIX 33 AD6 SER A 960 SER A 970 1 11 HELIX 34 AD7 THR A 976 SER A 991 1 16 HELIX 35 AD8 SER A 991 ARG A 996 1 6 HELIX 36 AD9 LEU A 997 TRP A 1023 1 27 HELIX 37 AE1 ALA B 298 ALA B 302 5 5 HELIX 38 AE2 SER B 355 VAL B 359 5 5 HELIX 39 AE3 ILE B 387 GLN B 389 5 3 HELIX 40 AE4 VAL B 390 GLU B 409 1 20 HELIX 41 AE5 SER B 451 PHE B 471 1 21 HELIX 42 AE6 TRP B 479 ASP B 482 5 4 HELIX 43 AE7 LEU B 483 PHE B 502 1 20 HELIX 44 AE8 LYS B 503 LEU B 505 5 3 HELIX 45 AE9 SER B 506 LEU B 524 1 19 HELIX 46 AF1 GLU B 538 MET B 543 1 6 HELIX 47 AF2 ASP B 545 LEU B 563 1 19 HELIX 48 AF3 SER B 564 SER B 580 1 17 HELIX 49 AF4 GLN B 585 GLU B 595 1 11 HELIX 50 AF5 VAL B 603 ARG B 605 5 3 HELIX 51 AF6 MET B 606 GLN B 613 1 8 HELIX 52 AF7 ILE B 694 ASN B 697 5 4 HELIX 53 AF8 ALA B 705 ILE B 718 1 14 HELIX 54 AF9 ASN B 719 LEU B 723 5 5 HELIX 55 AG1 SER B 724 LEU B 741 1 18 HELIX 56 AG2 LEU B 746 ASN B 754 1 9 HELIX 57 AG3 TYR B 755 ASN B 758 5 4 HELIX 58 AG4 HIS B 761 GLY B 783 1 23 HELIX 59 AG5 TYR B 784 GLN B 806 1 23 HELIX 60 AG6 THR B 813 HIS B 830 1 18 HELIX 61 AG7 ASN B 834 SER B 849 1 16 HELIX 62 AG8 VAL B 859 THR B 870 1 12 HELIX 63 AG9 THR B 870 ILE B 884 1 15 HELIX 64 AH1 SER B 886 ALA B 898 1 13 HELIX 65 AH2 ASP B 902 GLY B 916 1 15 HELIX 66 AH3 LYS B 923 HIS B 934 1 12 HELIX 67 AH4 GLY B 937 ASN B 948 1 12 HELIX 68 AH5 ASN B 948 PHE B 956 1 9 HELIX 69 AH6 SER B 960 THR B 971 1 12 HELIX 70 AH7 THR B 976 SER B 991 1 16 HELIX 71 AH8 SER B 991 LEU B 997 1 7 HELIX 72 AH9 LEU B 997 THR B 1022 1 26 SHEET 1 AA1 6 GLU A 229 GLN A 231 0 SHEET 2 AA1 6 ASN A 215 MET A 222 -1 N PHE A 221 O LYS A 230 SHEET 3 AA1 6 TYR A 257 ASN A 266 -1 O SER A 264 N ASN A 215 SHEET 4 AA1 6 THR A 189 VAL A 198 -1 N ILE A 196 O LEU A 259 SHEET 5 AA1 6 PRO A 174 PRO A 183 -1 N GLU A 178 O THR A 195 SHEET 6 AA1 6 THR A 314 ILE A 319 1 O LYS A 318 N LEU A 179 SHEET 1 AA2 3 ASN A 206 HIS A 210 0 SHEET 2 AA2 3 GLN A 242 VAL A 246 -1 O ILE A 243 N LEU A 209 SHEET 3 AA2 3 ILE A 234 GLU A 236 -1 N LEU A 235 O ALA A 244 SHEET 1 AA3 4 GLY A 273 THR A 280 0 SHEET 2 AA3 4 LYS A 286 GLN A 293 -1 O LYS A 287 N TYR A 279 SHEET 3 AA3 4 PHE A 361 GLY A 364 -1 O VAL A 363 N ALA A 290 SHEET 4 AA3 4 THR A 326 SER A 329 -1 N LEU A 328 O ILE A 362 SHEET 1 AA4 2 LYS A 333 VAL A 338 0 SHEET 2 AA4 2 VAL A 344 PHE A 348 -1 O GLU A 347 N SER A 335 SHEET 1 AA5 3 LEU A 377 SER A 379 0 SHEET 2 AA5 3 LYS A 416 LEU A 419 1 O LEU A 419 N SER A 379 SHEET 3 AA5 3 LEU A 435 LEU A 436 1 O LEU A 436 N ASP A 418 SHEET 1 AA6 2 VAL A 475 MET A 477 0 SHEET 2 AA6 2 ALA A 582 ILE A 584 1 O ALA A 582 N THR A 476 SHEET 1 AA7 3 LYS A 623 LYS A 624 0 SHEET 2 AA7 3 GLU A 627 ARG A 634 -1 O GLU A 627 N LYS A 624 SHEET 3 AA7 3 GLY A 679 ASN A 682 -1 O ILE A 681 N LEU A 628 SHEET 1 AA8 4 LYS A 623 LYS A 624 0 SHEET 2 AA8 4 GLU A 627 ARG A 634 -1 O GLU A 627 N LYS A 624 SHEET 3 AA8 4 PRO A 617 VAL A 621 -1 N LEU A 618 O GLU A 633 SHEET 4 AA8 4 ILE A 701 TYR A 704 1 O ILE A 701 N VAL A 619 SHEET 1 AA9 3 TYR A 668 VAL A 671 0 SHEET 2 AA9 3 SER A 657 THR A 660 -1 N THR A 660 O TYR A 668 SHEET 3 AA9 3 VAL A 690 VAL A 692 -1 O LYS A 691 N VAL A 659 SHEET 1 AB1 6 TYR B 257 ASN B 266 0 SHEET 2 AB1 6 THR B 189 ALA B 200 -1 N GLY B 192 O TYR B 263 SHEET 3 AB1 6 VAL B 172 PRO B 183 -1 N GLU B 178 O THR B 195 SHEET 4 AB1 6 THR B 314 ASP B 322 1 O ILE B 316 N TYR B 177 SHEET 5 AB1 6 LEU B 343 GLU B 347 -1 O ASP B 346 N ILE B 319 SHEET 6 AB1 6 SER B 336 VAL B 338 -1 N VAL B 337 O GLN B 345 SHEET 1 AB2 3 THR B 204 HIS B 210 0 SHEET 2 AB2 3 GLN B 242 LEU B 251 -1 O ILE B 243 N LEU B 209 SHEET 3 AB2 3 GLU B 233 ILE B 234 -1 N GLU B 233 O VAL B 246 SHEET 1 AB3 2 TYR B 275 SER B 278 0 SHEET 2 AB3 2 TYR B 288 ALA B 291 -1 O PHE B 289 N PHE B 277 SHEET 1 AB4 2 THR B 326 SER B 329 0 SHEET 2 AB4 2 PHE B 361 GLY B 364 -1 O ILE B 362 N LEU B 328 SHEET 1 AB5 4 SER B 370 ASP B 372 0 SHEET 2 AB5 4 LEU B 377 SER B 379 -1 O VAL B 378 N GLN B 371 SHEET 3 AB5 4 LYS B 416 ILE B 422 1 O LEU B 419 N SER B 379 SHEET 4 AB5 4 LEU B 435 ARG B 439 1 O LEU B 436 N VAL B 420 SHEET 1 AB6 2 THR B 476 MET B 477 0 SHEET 2 AB6 2 SER B 583 ILE B 584 1 O ILE B 584 N THR B 476 SHEET 1 AB7 4 SER B 678 ASN B 682 0 SHEET 2 AB7 4 GLU B 627 ARG B 634 -1 N ILE B 630 O GLY B 679 SHEET 3 AB7 4 PRO B 617 LYS B 624 -1 N LEU B 618 O GLU B 633 SHEET 4 AB7 4 ILE B 701 TYR B 704 1 O HIS B 703 N VAL B 619 SHEET 1 AB8 2 ILE B 654 LEU B 656 0 SHEET 2 AB8 2 SER B 672 LEU B 674 -1 O SER B 672 N LEU B 656 SHEET 1 AB9 3 TYR B 668 GLN B 669 0 SHEET 2 AB9 3 TYR B 658 GLU B 661 -1 N THR B 660 O TYR B 668 SHEET 3 AB9 3 TRP B 689 VAL B 692 -1 O LYS B 691 N VAL B 659 SSBOND 1 CYS A 828 CYS A 835 1555 1555 2.05 SSBOND 2 CYS B 828 CYS B 835 1555 1555 2.04 LINK ND2 ASN A 184 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 215 C1 NAG A1101 1555 1555 1.45 LINK ND2 ASN A 256 C1 NAG A1109 1555 1555 1.43 LINK ND2 ASN A 266 C1 NAG H 1 1555 1555 1.46 LINK ND2 ASN A 368 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 374 C1 NAG A1104 1555 1555 1.45 LINK ND2 ASN A 448 C1 NAG A1106 1555 1555 1.46 LINK ND2 ASN A 525 C1 NAG A1105 1555 1555 1.44 LINK ND2 ASN A 578 C1 NAG E 1 1555 1555 1.43 LINK ND2 ASN A 682 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 760 C1 NAG G 1 1555 1555 1.46 LINK ND2 ASN A 834 C1 NAG A1102 1555 1555 1.42 LINK ND2 ASN A 850 C1 NAG A1103 1555 1555 1.44 LINK ND2 ASN B 184 C1 NAG B1101 1555 1555 1.45 LINK ND2 ASN B 215 C1 NAG B1102 1555 1555 1.46 LINK ND2 ASN B 256 C1 NAG L 1 1555 1555 1.46 LINK ND2 ASN B 266 C1 NAG B1104 1555 1555 1.44 LINK ND2 ASN B 374 C1 NAG B1105 1555 1555 1.46 LINK ND2 ASN B 525 C1 NAG B1106 1555 1555 1.43 LINK ND2 ASN B 578 C1 NAG I 1 1555 1555 1.46 LINK ND2 ASN B 760 C1 NAG J 1 1555 1555 1.45 LINK ND2 ASN B 834 C1 NAG K 1 1555 1555 1.43 LINK ND2 ASN B 850 C1 NAG B1103 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.46 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.46 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.45 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.42 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.47 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.46 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.46 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.45 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.46 LINK NE2 HIS A 464 ZN ZN A1108 1555 1555 2.25 LINK NE2 HIS A 468 ZN ZN A1108 1555 1555 2.25 LINK OE1 GLU A 487 ZN ZN A1108 1555 1555 2.09 LINK N26 WC3 A1107 ZN ZN A1108 1555 1555 2.37 LINK N28 WC3 A1107 ZN ZN A1108 1555 1555 2.60 LINK N34 WC3 A1107 ZN ZN A1108 1555 1555 2.45 LINK NE2 HIS B 464 ZN ZN B1108 1555 1555 2.19 LINK NE2 HIS B 468 ZN ZN B1108 1555 1555 2.17 LINK OE2 GLU B 487 ZN ZN B1108 1555 1555 2.19 LINK N26 WC3 B1107 ZN ZN B1108 1555 1555 2.30 CRYST1 68.229 255.121 73.274 90.00 110.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014657 0.000000 0.005335 0.00000 SCALE2 0.000000 0.003920 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014523 0.00000