HEADER CELL CYCLE 23-MAY-23 8P4Z TITLE CRYSTAL STRUCTURE OF THE HUMAN CDK7 KINASE DOMAIN IN COMPLEX WITH TITLE 2 LDC4297 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 7; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 39 KDA PROTEIN KINASE,P39 MO15,CDK-ACTIVATING KINASE 1,CELL COMPND 5 DIVISION PROTEIN KINASE 7,SERINE/THREONINE-PROTEIN KINASE 1,TFIIH COMPND 6 BASAL TRANSCRIPTION FACTOR COMPLEX KINASE SUBUNIT; COMPND 7 EC: 2.7.11.22,2.7.11.23; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDK7, CAK, CAK1, CDKN7, MO15, STK1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: EXPISF9 KEYWDS TRANSFERASE, CYCLIN-DEPENDENT KINASE, CELL DIVISION, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR M.LAURSEN,R.CAING-CARLSSON,R.HOUSSARI,A.JAVADI,Y.R.KIMBUNG,V.MURINA, AUTHOR 2 J.M.OROZCO-RODRIGUEZ,A.SVENSSON,M.WELIN,D.LOGAN,B.SVENSSON,B.WALSE REVDAT 2 07-FEB-24 8P4Z 1 REMARK REVDAT 1 14-JUN-23 8P4Z 0 JRNL AUTH M.LAURSEN,R.CAING-CARLSSON,R.HOUSSARI,A.JAVADI,Y.R.KIMBUNG, JRNL AUTH 2 V.MURINA,J.M.OROZCO-RODRIGUEZ,A.SVENSSON,M.WELIN,D.LOGAN, JRNL AUTH 3 B.SVENSSON,B.WALSE JRNL TITL CRYSTAL STRUCTURE OF THE HUMAN CDK7 KINASE DOMAIN IN COMPLEX JRNL TITL 2 WITH LDC4297 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.8 (22-FEB-2023) REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 30063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 1479 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 51 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.77 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.86 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 602 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3792 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 569 REMARK 3 BIN R VALUE (WORKING SET) : 0.3740 REMARK 3 BIN FREE R VALUE : 0.4726 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.48 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4393 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 138 REMARK 3 SOLVENT ATOMS : 27 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 105.8 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.410 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.381 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.265 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.385 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.269 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4659 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6297 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1625 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 777 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4659 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 581 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3197 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 0.83 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.23 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.78 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -19.1002 -0.2800 34.4299 REMARK 3 T TENSOR REMARK 3 T11: 0.0086 T22: -0.0434 REMARK 3 T33: -0.0347 T12: -0.0486 REMARK 3 T13: -0.1831 T23: 0.1325 REMARK 3 L TENSOR REMARK 3 L11: 1.7963 L22: 2.9834 REMARK 3 L33: 9.2319 L12: 0.4904 REMARK 3 L13: 0.3197 L23: -0.0916 REMARK 3 S TENSOR REMARK 3 S11: 0.1342 S12: 0.0718 S13: -0.1415 REMARK 3 S21: -0.0423 S22: -0.3354 S23: -0.6219 REMARK 3 S31: -0.4656 S32: 0.7057 S33: 0.2012 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -2.8082 11.3373 67.8368 REMARK 3 T TENSOR REMARK 3 T11: -0.0785 T22: -0.1341 REMARK 3 T33: -0.1417 T12: 0.0008 REMARK 3 T13: -0.0462 T23: 0.0438 REMARK 3 L TENSOR REMARK 3 L11: 4.0230 L22: 1.4749 REMARK 3 L33: 2.1033 L12: 0.2473 REMARK 3 L13: -1.0656 L23: -0.4347 REMARK 3 S TENSOR REMARK 3 S11: 0.3202 S12: 0.0402 S13: 0.0733 REMARK 3 S21: -0.2485 S22: -0.1755 S23: -0.0357 REMARK 3 S31: -0.0742 S32: -0.0007 S33: -0.1447 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P4Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292130667. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX IV REMARK 200 BEAMLINE : BIOMAX REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : SI (111), HDCM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 10-JAN-2022 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 (10-JUN-2022) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30114 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 40.00 REMARK 200 R MERGE (I) : 0.16700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 41.00 REMARK 200 R MERGE FOR SHELL (I) : 4.90900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 (20-AUG-2021) REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 CITRATE, 12% W/V PEG 3350, 0.2 M NDSB-201, PH 7.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 Y+3/4,X+1/4,-Z+1/4 REMARK 290 14555 -Y+3/4,-X+3/4,-Z+3/4 REMARK 290 15555 Y+1/4,-X+1/4,Z+3/4 REMARK 290 16555 -Y+1/4,X+3/4,Z+1/4 REMARK 290 17555 X+3/4,Z+1/4,-Y+1/4 REMARK 290 18555 -X+1/4,Z+3/4,Y+1/4 REMARK 290 19555 -X+3/4,-Z+3/4,-Y+3/4 REMARK 290 20555 X+1/4,-Z+1/4,Y+3/4 REMARK 290 21555 Z+3/4,Y+1/4,-X+1/4 REMARK 290 22555 Z+1/4,-Y+1/4,X+3/4 REMARK 290 23555 -Z+1/4,Y+3/4,X+1/4 REMARK 290 24555 -Z+3/4,-Y+3/4,-X+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 94.08500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 94.08500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 94.08500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 94.08500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 94.08500 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 94.08500 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 94.08500 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 94.08500 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 94.08500 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 94.08500 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 94.08500 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 94.08500 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 94.08500 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 141.12750 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 47.04250 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 141.12750 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 141.12750 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 141.12750 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 47.04250 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 141.12750 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 47.04250 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 141.12750 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 47.04250 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 141.12750 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 47.04250 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 47.04250 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 141.12750 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 47.04250 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 141.12750 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 141.12750 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 141.12750 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 47.04250 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 141.12750 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 141.12750 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 47.04250 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 47.04250 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 47.04250 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 141.12750 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 47.04250 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 141.12750 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 47.04250 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 141.12750 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 141.12750 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 141.12750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 8 REMARK 465 PRO A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 44 REMARK 465 LEU A 45 REMARK 465 GLY A 46 REMARK 465 HIS A 47 REMARK 465 ARG A 48 REMARK 465 SER A 49 REMARK 465 GLU A 50 REMARK 465 ALA A 51 REMARK 465 LYS A 52 REMARK 465 ASP A 53 REMARK 465 GLY A 54 REMARK 465 ILE A 55 REMARK 465 GLY A 82 REMARK 465 HIS A 83 REMARK 465 LYS A 84 REMARK 465 SER A 161 REMARK 465 PHE A 162 REMARK 465 GLY A 163 REMARK 465 SER A 164 REMARK 465 PRO A 165 REMARK 465 ASN A 166 REMARK 465 ARG A 167 REMARK 465 ALA A 168 REMARK 465 TYR A 169 REMARK 465 THR A 170 REMARK 465 HIS A 171 REMARK 465 GLN A 172 REMARK 465 VAL A 173 REMARK 465 ASN A 311 REMARK 465 GLY B 8 REMARK 465 HIS B 47 REMARK 465 ARG B 48 REMARK 465 SER B 49 REMARK 465 GLU B 50 REMARK 465 ALA B 51 REMARK 465 LYS B 52 REMARK 465 ASP B 53 REMARK 465 GLY B 54 REMARK 465 ILE B 55 REMARK 465 HIS B 83 REMARK 465 LYS B 84 REMARK 465 SER B 85 REMARK 465 PHE B 162 REMARK 465 GLY B 163 REMARK 465 SER B 164 REMARK 465 PRO B 165 REMARK 465 ASN B 166 REMARK 465 ARG B 167 REMARK 465 ALA B 168 REMARK 465 TYR B 169 REMARK 465 THR B 170 REMARK 465 HIS B 171 REMARK 465 GLN B 172 REMARK 465 VAL B 173 REMARK 465 ASN B 311 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 87 95.30 -64.23 REMARK 500 ARG A 136 -9.13 72.35 REMARK 500 ASP A 137 41.45 -145.47 REMARK 500 ASP A 155 59.87 75.31 REMARK 500 LEU A 158 128.71 30.90 REMARK 500 PHE A 261 72.05 -103.36 REMARK 500 LYS B 10 -5.37 -56.93 REMARK 500 ARG B 136 -8.10 71.31 REMARK 500 ARG B 136 -7.10 70.35 REMARK 500 ASP B 137 41.69 -145.98 REMARK 500 ASP B 155 52.29 74.49 REMARK 500 LEU B 158 50.56 26.49 REMARK 500 PHE B 261 71.47 -103.66 REMARK 500 REMARK 500 REMARK: NULL DBREF 8P4Z A 10 311 UNP P50613 CDK7_HUMAN 10 311 DBREF 8P4Z B 10 311 UNP P50613 CDK7_HUMAN 10 311 SEQADV 8P4Z GLY A 8 UNP P50613 EXPRESSION TAG SEQADV 8P4Z PRO A 9 UNP P50613 EXPRESSION TAG SEQADV 8P4Z GLY B 8 UNP P50613 EXPRESSION TAG SEQADV 8P4Z PRO B 9 UNP P50613 EXPRESSION TAG SEQRES 1 A 304 GLY PRO LYS ARG TYR GLU LYS LEU ASP PHE LEU GLY GLU SEQRES 2 A 304 GLY GLN PHE ALA THR VAL TYR LYS ALA ARG ASP LYS ASN SEQRES 3 A 304 THR ASN GLN ILE VAL ALA ILE LYS LYS ILE LYS LEU GLY SEQRES 4 A 304 HIS ARG SER GLU ALA LYS ASP GLY ILE ASN ARG THR ALA SEQRES 5 A 304 LEU ARG GLU ILE LYS LEU LEU GLN GLU LEU SER HIS PRO SEQRES 6 A 304 ASN ILE ILE GLY LEU LEU ASP ALA PHE GLY HIS LYS SER SEQRES 7 A 304 ASN ILE SER LEU VAL PHE ASP PHE MET GLU THR ASP LEU SEQRES 8 A 304 GLU VAL ILE ILE LYS ASP ASN SER LEU VAL LEU THR PRO SEQRES 9 A 304 SER HIS ILE LYS ALA TYR MET LEU MET THR LEU GLN GLY SEQRES 10 A 304 LEU GLU TYR LEU HIS GLN HIS TRP ILE LEU HIS ARG ASP SEQRES 11 A 304 LEU LYS PRO ASN ASN LEU LEU LEU ASP GLU ASN GLY VAL SEQRES 12 A 304 LEU LYS LEU ALA ASP PHE GLY LEU ALA LYS SER PHE GLY SEQRES 13 A 304 SER PRO ASN ARG ALA TYR THR HIS GLN VAL VAL THR ARG SEQRES 14 A 304 TRP TYR ARG ALA PRO GLU LEU LEU PHE GLY ALA ARG MET SEQRES 15 A 304 TYR GLY VAL GLY VAL ASP MET TRP ALA VAL GLY CYS ILE SEQRES 16 A 304 LEU ALA GLU LEU LEU LEU ARG VAL PRO PHE LEU PRO GLY SEQRES 17 A 304 ASP SER ASP LEU ASP GLN LEU THR ARG ILE PHE GLU THR SEQRES 18 A 304 LEU GLY THR PRO THR GLU GLU GLN TRP PRO ASP MET CYS SEQRES 19 A 304 SER LEU PRO ASP TYR VAL THR PHE LYS SER PHE PRO GLY SEQRES 20 A 304 ILE PRO LEU HIS HIS ILE PHE SER ALA ALA GLY ASP ASP SEQRES 21 A 304 LEU LEU ASP LEU ILE GLN GLY LEU PHE LEU PHE ASN PRO SEQRES 22 A 304 CYS ALA ARG ILE THR ALA THR GLN ALA LEU LYS MET LYS SEQRES 23 A 304 TYR PHE SER ASN ARG PRO GLY PRO THR PRO GLY CYS GLN SEQRES 24 A 304 LEU PRO ARG PRO ASN SEQRES 1 B 304 GLY PRO LYS ARG TYR GLU LYS LEU ASP PHE LEU GLY GLU SEQRES 2 B 304 GLY GLN PHE ALA THR VAL TYR LYS ALA ARG ASP LYS ASN SEQRES 3 B 304 THR ASN GLN ILE VAL ALA ILE LYS LYS ILE LYS LEU GLY SEQRES 4 B 304 HIS ARG SER GLU ALA LYS ASP GLY ILE ASN ARG THR ALA SEQRES 5 B 304 LEU ARG GLU ILE LYS LEU LEU GLN GLU LEU SER HIS PRO SEQRES 6 B 304 ASN ILE ILE GLY LEU LEU ASP ALA PHE GLY HIS LYS SER SEQRES 7 B 304 ASN ILE SER LEU VAL PHE ASP PHE MET GLU THR ASP LEU SEQRES 8 B 304 GLU VAL ILE ILE LYS ASP ASN SER LEU VAL LEU THR PRO SEQRES 9 B 304 SER HIS ILE LYS ALA TYR MET LEU MET THR LEU GLN GLY SEQRES 10 B 304 LEU GLU TYR LEU HIS GLN HIS TRP ILE LEU HIS ARG ASP SEQRES 11 B 304 LEU LYS PRO ASN ASN LEU LEU LEU ASP GLU ASN GLY VAL SEQRES 12 B 304 LEU LYS LEU ALA ASP PHE GLY LEU ALA LYS SER PHE GLY SEQRES 13 B 304 SER PRO ASN ARG ALA TYR THR HIS GLN VAL VAL THR ARG SEQRES 14 B 304 TRP TYR ARG ALA PRO GLU LEU LEU PHE GLY ALA ARG MET SEQRES 15 B 304 TYR GLY VAL GLY VAL ASP MET TRP ALA VAL GLY CYS ILE SEQRES 16 B 304 LEU ALA GLU LEU LEU LEU ARG VAL PRO PHE LEU PRO GLY SEQRES 17 B 304 ASP SER ASP LEU ASP GLN LEU THR ARG ILE PHE GLU THR SEQRES 18 B 304 LEU GLY THR PRO THR GLU GLU GLN TRP PRO ASP MET CYS SEQRES 19 B 304 SER LEU PRO ASP TYR VAL THR PHE LYS SER PHE PRO GLY SEQRES 20 B 304 ILE PRO LEU HIS HIS ILE PHE SER ALA ALA GLY ASP ASP SEQRES 21 B 304 LEU LEU ASP LEU ILE GLN GLY LEU PHE LEU PHE ASN PRO SEQRES 22 B 304 CYS ALA ARG ILE THR ALA THR GLN ALA LEU LYS MET LYS SEQRES 23 B 304 TYR PHE SER ASN ARG PRO GLY PRO THR PRO GLY CYS GLN SEQRES 24 B 304 LEU PRO ARG PRO ASN HET WZ8 A 401 32 HET GOL A 402 6 HET GOL A 403 6 HET PGE A 404 10 HET WZ8 B 401 32 HET GOL B 402 6 HET GOL B 403 6 HET GOL B 404 6 HET GOL B 405 6 HET GOL B 406 6 HET 1PE B 407 16 HET GOL B 408 6 HETNAM WZ8 2-[(3R)-PIPERIDIN-3-YL]OXY-8-PROPAN-2-YL-N-[(2-PYRAZOL- HETNAM 2 WZ8 1-YLPHENYL)METHYL]PYRAZOLO[1,5-A][1,3,5]TRIAZIN-4- HETNAM 3 WZ8 AMINE HETNAM GOL GLYCEROL HETNAM PGE TRIETHYLENE GLYCOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 1PE PEG400 FORMUL 3 WZ8 2(C23 H28 N8 O) FORMUL 4 GOL 8(C3 H8 O3) FORMUL 6 PGE C6 H14 O4 FORMUL 13 1PE C10 H22 O6 FORMUL 15 HOH *27(H2 O) HELIX 1 AA1 ARG A 57 LEU A 69 1 13 HELIX 2 AA2 LEU A 98 ASP A 104 1 7 HELIX 3 AA3 THR A 110 HIS A 131 1 22 HELIX 4 AA4 LYS A 139 ASN A 141 5 3 HELIX 5 AA5 VAL A 174 ARG A 179 5 6 HELIX 6 AA6 ALA A 180 PHE A 185 1 6 HELIX 7 AA7 VAL A 192 ARG A 209 1 18 HELIX 8 AA8 SER A 217 GLY A 230 1 14 HELIX 9 AA9 ASP A 239 LEU A 243 5 5 HELIX 10 AB1 PRO A 256 PHE A 261 1 6 HELIX 11 AB2 GLY A 265 PHE A 276 1 12 HELIX 12 AB3 THR A 285 LYS A 291 1 7 HELIX 13 AB4 MET A 292 ASN A 297 1 6 HELIX 14 AB5 PRO A 303 LEU A 307 5 5 HELIX 15 AB6 ARG B 57 LEU B 69 1 13 HELIX 16 AB7 LEU B 98 ASP B 104 1 7 HELIX 17 AB8 THR B 110 HIS B 131 1 22 HELIX 18 AB9 LYS B 139 ASN B 141 5 3 HELIX 19 AC1 VAL B 174 ARG B 179 5 6 HELIX 20 AC2 ALA B 180 PHE B 185 1 6 HELIX 21 AC3 VAL B 192 ARG B 209 1 18 HELIX 22 AC4 SER B 217 GLY B 230 1 14 HELIX 23 AC5 ASP B 239 LEU B 243 5 5 HELIX 24 AC6 PRO B 256 PHE B 261 1 6 HELIX 25 AC7 GLY B 265 PHE B 276 1 12 HELIX 26 AC8 THR B 285 LYS B 291 1 7 HELIX 27 AC9 MET B 292 ASN B 297 1 6 HELIX 28 AD1 PRO B 303 LEU B 307 5 5 SHEET 1 AA1 5 GLU A 13 GLU A 20 0 SHEET 2 AA1 5 THR A 25 ARG A 30 -1 O LYS A 28 N LEU A 15 SHEET 3 AA1 5 ILE A 37 LYS A 42 -1 O ILE A 40 N TYR A 27 SHEET 4 AA1 5 SER A 88 ASP A 92 -1 O LEU A 89 N LYS A 41 SHEET 5 AA1 5 LEU A 77 ALA A 80 -1 N ASP A 79 O VAL A 90 SHEET 1 AA2 3 THR A 96 ASP A 97 0 SHEET 2 AA2 3 LEU A 143 LEU A 145 -1 O LEU A 145 N THR A 96 SHEET 3 AA2 3 LEU A 151 LEU A 153 -1 O LYS A 152 N LEU A 144 SHEET 1 AA3 5 TYR B 12 GLY B 19 0 SHEET 2 AA3 5 ALA B 24 ASP B 31 -1 O VAL B 26 N GLY B 19 SHEET 3 AA3 5 GLN B 36 ILE B 43 -1 O GLN B 36 N ASP B 31 SHEET 4 AA3 5 ILE B 87 ASP B 92 -1 O ILE B 87 N ILE B 43 SHEET 5 AA3 5 LEU B 77 PHE B 81 -1 N LEU B 78 O VAL B 90 SHEET 1 AA4 3 THR B 96 ASP B 97 0 SHEET 2 AA4 3 LEU B 143 LEU B 145 -1 O LEU B 145 N THR B 96 SHEET 3 AA4 3 LEU B 151 LEU B 153 -1 O LYS B 152 N LEU B 144 CISPEP 1 ARG A 298 PRO A 299 0 -0.11 CISPEP 2 ARG B 298 PRO B 299 0 2.36 CRYST1 188.170 188.170 188.170 90.00 90.00 90.00 P 41 3 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005314 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005314 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005314 0.00000