HEADER IMMUNE SYSTEM 26-MAY-23 8P6H TITLE BOVINE NAIVE ULTRALONG ANTIBODY ABBLV5B8* COLLECTED AT 100K COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY BLV5B8* LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTIBODY BLV5B8* HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_TAXID: 9913; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 7 EXPRESSION_SYSTEM_ATCC_NUMBER: 293; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: POPINBOVL; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 11 ORGANISM_TAXID: 9913; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: EXPI293; SOURCE 15 EXPRESSION_SYSTEM_ATCC_NUMBER: 293; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: POPINBOVH KEYWDS ULTRALONG, IMMUNOGLOBULIN, NAIVE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.D.CLARKE,A.DOUANGAMATH,H.MIKOLAJEK,D.I.STUART,R.J.OWENS REVDAT 2 16-OCT-24 8P6H 1 REMARK REVDAT 1 10-JUL-24 8P6H 0 JRNL AUTH J.D.CLARKE,A.DOUANGAMATH,H.MIKOLAJEK,J.NYAGWANGE,W.MWANGI, JRNL AUTH 2 M.D.P.PLACIDO,R.J.OWENS,D.I.STUART,J.HAMMOND JRNL TITL THE IMPACT OF CHAIN-EXCHANGE ON BOVINE ULTRALONG JRNL TITL 2 IMMUNOGLOBULINS. JRNL REF ACTA CRYSTALLOGRAPHICA 2023 JRNL REF 2 SECTION F REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0405 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 78110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 3984 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.46 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.50 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5807 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3840 REMARK 3 BIN FREE R VALUE SET COUNT : 263 REMARK 3 BIN FREE R VALUE : 0.3990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3165 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.01000 REMARK 3 B22 (A**2) : 1.40000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.076 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.108 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.942 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3239 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2939 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4421 ; 1.528 ; 1.646 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6828 ; 0.532 ; 1.560 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 431 ; 7.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 12 ; 7.250 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 501 ;13.690 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 527 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3729 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 675 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1733 ; 3.289 ; 3.119 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1733 ; 3.283 ; 3.119 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2158 ; 4.779 ; 5.550 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2159 ; 4.778 ; 5.551 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1506 ; 3.547 ; 3.355 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1507 ; 3.546 ; 3.357 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2263 ; 5.371 ; 6.010 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3450 ; 7.933 ;31.250 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3451 ; 7.933 ;31.260 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8P6H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-MAY-23. REMARK 100 THE DEPOSITION ID IS D_1292130762. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : 130X80 MICRORED APERTURE, REMARK 200 HORIZONTALLY AND VERTICALLY REMARK 200 FOCUSSING MIRRORS, 4XSLITS, REMARK 200 VARIABLE FOCUS BEAM REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 0.6.374-GCCD9EB9A-DIALS-2.1 REMARK 200 DATA SCALING SOFTWARE : POINTLESS 1.11.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82095 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 80.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 1.82500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 5.8.0405 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% W/V PEG 20000, 20% V/V PEG MME REMARK 280 550, 0.02M SODIUM L-GLUTAMATE, 0.02M DL-ALANINE, 0.02M GLYCINE, REMARK 280 0.02M DL-LYSINE HCL, 0.02M DL-SERINE, 0.1 M MOPS/HEPES-NA, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 80.58000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.52250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 80.58000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.52250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET L -27 REMARK 465 GLY L -26 REMARK 465 ILE L -25 REMARK 465 LEU L -24 REMARK 465 PRO L -23 REMARK 465 SER L -22 REMARK 465 PRO L -21 REMARK 465 GLY L -20 REMARK 465 MET L -19 REMARK 465 PRO L -18 REMARK 465 ALA L -17 REMARK 465 LEU L -16 REMARK 465 LEU L -15 REMARK 465 SER L -14 REMARK 465 LEU L -13 REMARK 465 VAL L -12 REMARK 465 SER L -11 REMARK 465 LEU L -10 REMARK 465 LEU L -9 REMARK 465 SER L -8 REMARK 465 VAL L -7 REMARK 465 LEU L -6 REMARK 465 LEU L -5 REMARK 465 MET L -4 REMARK 465 GLY L -3 REMARK 465 CYS L -2 REMARK 465 VAL L -1 REMARK 465 ALA L 0 REMARK 465 SER L 216 REMARK 465 MET H -27 REMARK 465 GLY H -26 REMARK 465 ILE H -25 REMARK 465 LEU H -24 REMARK 465 PRO H -23 REMARK 465 SER H -22 REMARK 465 PRO H -21 REMARK 465 GLY H -20 REMARK 465 MET H -19 REMARK 465 PRO H -18 REMARK 465 ALA H -17 REMARK 465 LEU H -16 REMARK 465 LEU H -15 REMARK 465 SER H -14 REMARK 465 LEU H -13 REMARK 465 VAL H -12 REMARK 465 SER H -11 REMARK 465 LEU H -10 REMARK 465 LEU H -9 REMARK 465 SER H -8 REMARK 465 VAL H -7 REMARK 465 LEU H -6 REMARK 465 LEU H -5 REMARK 465 MET H -4 REMARK 465 GLY H -3 REMARK 465 CYS H -2 REMARK 465 VAL H -1 REMARK 465 ALA H 0 REMARK 465 GLN H 1 REMARK 465 ARG H 103 REMARK 465 LYS H 104 REMARK 465 THR H 105 REMARK 465 CYS H 106 REMARK 465 SER H 107 REMARK 465 ASP H 108 REMARK 465 GLY H 109 REMARK 465 TYR H 110 REMARK 465 ILE H 111 REMARK 465 ALA H 112 REMARK 465 VAL H 113 REMARK 465 ASP H 114 REMARK 465 SER H 115 REMARK 465 CYS H 116 REMARK 465 GLY H 117 REMARK 465 ARG H 118 REMARK 465 GLY H 119 REMARK 465 GLN H 120 REMARK 465 SER H 121 REMARK 465 ASP H 122 REMARK 465 GLY H 123 REMARK 465 CYS H 124 REMARK 465 VAL H 125 REMARK 465 ASN H 126 REMARK 465 ASP H 127 REMARK 465 CYS H 128 REMARK 465 ASN H 129 REMARK 465 SER H 130 REMARK 465 CYS H 131 REMARK 465 TYR H 132 REMARK 465 TYR H 133 REMARK 465 GLY H 134 REMARK 465 TRP H 135 REMARK 465 ARG H 136 REMARK 465 ASN H 137 REMARK 465 CYS H 138 REMARK 465 ARG H 139 REMARK 465 ARG H 140 REMARK 465 GLN H 141 REMARK 465 PRO H 142 REMARK 465 ALA H 143 REMARK 465 ASP H 181 REMARK 465 LYS H 182 REMARK 465 SER H 183 REMARK 465 SER H 238 REMARK 465 THR H 239 REMARK 465 GLY H 267 REMARK 465 LYS H 268 REMARK 465 HIS H 269 REMARK 465 HIS H 270 REMARK 465 HIS H 271 REMARK 465 HIS H 272 REMARK 465 HIS H 273 REMARK 465 HIS H 274 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG H 5 CG CD NE CZ NH1 NH2 REMARK 470 PHE H 27 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 381 O HOH H 396 1.77 REMARK 500 O HOH H 391 O HOH H 401 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 28 -89.34 -127.94 REMARK 500 ASP L 52 -45.89 69.93 REMARK 500 GLN H 3 -32.98 -139.93 REMARK 500 LEU H 4 135.83 66.66 REMARK 500 SER H 15 -16.95 86.47 REMARK 500 THR H 23 -149.80 -140.89 REMARK 500 PHE H 27 173.84 174.37 REMARK 500 SER H 195 60.24 66.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG L 46 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 422 DISTANCE = 8.00 ANGSTROMS DBREF 8P6H L -27 216 PDB 8P6H 8P6H -27 216 DBREF 8P6H H -27 274 PDB 8P6H 8P6H -27 274 SEQRES 1 L 244 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 L 244 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 L 244 VAL ALA GLN GLY VAL LEU THR GLN PRO SER SER VAL SER SEQRES 4 L 244 GLY SER LEU GLY GLN ARG VAL SER ILE THR CYS SER GLY SEQRES 5 L 244 SER SER SER ASN VAL GLY ARG GLY TYR VAL SER TRP TYR SEQRES 6 L 244 GLN MET THR PRO GLY SER ALA PRO ARG THR LEU ILE TYR SEQRES 7 L 244 GLY ASP THR ASN ARG ALA SER GLY VAL PRO ASP ARG PHE SEQRES 8 L 244 SER ALA SER ARG SER GLY ASN THR ALA THR LEU THR ILE SEQRES 9 L 244 SER SER LEU GLN ALA GLU ASP GLU ALA ASP TYR PHE CYS SEQRES 10 L 244 ALA SER ALA GLU GLY SER SER SER ASN ALA VAL PHE GLY SEQRES 11 L 244 SER GLY THR THR LEU THR VAL LEU GLY GLN PRO LYS SER SEQRES 12 L 244 PRO PRO SER VAL THR LEU PHE PRO PRO SER THR GLU GLU SEQRES 13 L 244 LEU ASN GLY ASN LYS ALA THR LEU VAL CYS LEU ILE SER SEQRES 14 L 244 ASP PHE TYR PRO GLY SER VAL THR VAL VAL TRP LYS ALA SEQRES 15 L 244 ASP GLY SER THR ILE THR ARG ASN VAL GLU THR THR ARG SEQRES 16 L 244 ALA SER LYS GLN SER ASN SER LYS TYR ALA ALA SER SER SEQRES 17 L 244 TYR LEU SER LEU THR SER SER ASP TRP LYS SER LYS GLY SEQRES 18 L 244 SER TYR SER CYS GLU VAL THR HIS GLU GLY SER THR VAL SEQRES 19 L 244 THR LYS THR VAL LYS PRO SER GLU CYS SER SEQRES 1 H 302 MET GLY ILE LEU PRO SER PRO GLY MET PRO ALA LEU LEU SEQRES 2 H 302 SER LEU VAL SER LEU LEU SER VAL LEU LEU MET GLY CYS SEQRES 3 H 302 VAL ALA GLN VAL GLN LEU ARG GLU SER GLY PRO SER LEU SEQRES 4 H 302 VAL GLN PRO SER GLN THR LEU SER LEU THR CYS THR ALA SEQRES 5 H 302 SER GLY PHE SER LEU SER ASP LYS ALA VAL GLY TRP VAL SEQRES 6 H 302 ARG GLN ALA PRO GLY LYS ALA LEU GLU TRP LEU GLY SER SEQRES 7 H 302 ILE ASP THR GLY GLY SER THR GLY TYR ASN PRO GLY LEU SEQRES 8 H 302 LYS SER ARG LEU SER ILE THR LYS ASP ASN SER LYS SER SEQRES 9 H 302 GLN VAL SER LEU SER VAL SER SER VAL THR THR GLU ASP SEQRES 10 H 302 SER ALA THR TYR TYR CYS THR THR VAL HIS GLN GLU THR SEQRES 11 H 302 ARG LYS THR CYS SER ASP GLY TYR ILE ALA VAL ASP SER SEQRES 12 H 302 CYS GLY ARG GLY GLN SER ASP GLY CYS VAL ASN ASP CYS SEQRES 13 H 302 ASN SER CYS TYR TYR GLY TRP ARG ASN CYS ARG ARG GLN SEQRES 14 H 302 PRO ALA ILE HIS SER TYR GLU PHE HIS VAL ASP ALA TRP SEQRES 15 H 302 GLY ARG GLY LEU LEU VAL THR VAL SER SER ALA SER THR SEQRES 16 H 302 THR ALA PRO LYS VAL TYR PRO LEU SER SER CYS CYS GLY SEQRES 17 H 302 ASP LYS SER SER SER THR VAL THR LEU GLY CYS LEU VAL SEQRES 18 H 302 SER SER TYR MET PRO GLU PRO VAL THR VAL THR TRP ASN SEQRES 19 H 302 SER GLY ALA LEU LYS SER GLY VAL HIS THR PHE PRO ALA SEQRES 20 H 302 VAL LEU GLN SER SER GLY LEU TYR SER LEU SER SER MET SEQRES 21 H 302 VAL THR VAL PRO GLY SER THR SER GLY THR GLN THR PHE SEQRES 22 H 302 THR CYS ASN VAL ALA HIS PRO ALA SER SER THR LYS VAL SEQRES 23 H 302 ASP LYS ALA VAL ASP PRO ARG CYS GLY LYS HIS HIS HIS SEQRES 24 H 302 HIS HIS HIS FORMUL 3 HOH *290(H2 O) HELIX 1 AA1 ASN L 28 GLY L 32 5 5 HELIX 2 AA2 GLN L 80 GLU L 84 5 5 HELIX 3 AA3 SER L 125 GLY L 131 1 7 HELIX 4 AA4 SER L 186 LYS L 192 1 7 HELIX 5 AA5 LEU H 63 SER H 65 5 3 HELIX 6 AA6 THR H 86 SER H 90 5 5 HELIX 7 AA7 SER H 207 ALA H 209 5 3 HELIX 8 AA8 PRO H 252 SER H 255 5 4 SHEET 1 AA1 6 SER L 9 SER L 13 0 SHEET 2 AA1 6 THR L 105 LEU L 110 1 O LEU L 110 N GLY L 12 SHEET 3 AA1 6 ALA L 85 ALA L 92 -1 N ALA L 85 O LEU L 107 SHEET 4 AA1 6 SER L 35 MET L 39 -1 N MET L 39 O ASP L 86 SHEET 5 AA1 6 ARG L 46 TYR L 50 -1 O LEU L 48 N TRP L 36 SHEET 6 AA1 6 ASN L 54 ARG L 55 -1 O ASN L 54 N TYR L 50 SHEET 1 AA2 4 SER L 9 SER L 13 0 SHEET 2 AA2 4 THR L 105 LEU L 110 1 O LEU L 110 N GLY L 12 SHEET 3 AA2 4 ALA L 85 ALA L 92 -1 N ALA L 85 O LEU L 107 SHEET 4 AA2 4 ALA L 99 PHE L 101 -1 O VAL L 100 N SER L 91 SHEET 1 AA3 3 VAL L 18 SER L 23 0 SHEET 2 AA3 3 THR L 71 ILE L 76 -1 O ILE L 76 N VAL L 18 SHEET 3 AA3 3 PHE L 63 SER L 68 -1 N SER L 64 O THR L 75 SHEET 1 AA4 4 SER L 118 PHE L 122 0 SHEET 2 AA4 4 LYS L 133 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 AA4 4 TYR L 176 THR L 185 -1 O LEU L 184 N ALA L 134 SHEET 4 AA4 4 VAL L 163 THR L 165 -1 N GLU L 164 O TYR L 181 SHEET 1 AA5 4 SER L 118 PHE L 122 0 SHEET 2 AA5 4 LYS L 133 PHE L 143 -1 O LEU L 139 N THR L 120 SHEET 3 AA5 4 TYR L 176 THR L 185 -1 O LEU L 184 N ALA L 134 SHEET 4 AA5 4 SER L 169 LYS L 170 -1 N SER L 169 O ALA L 177 SHEET 1 AA6 4 SER L 157 ILE L 159 0 SHEET 2 AA6 4 THR L 149 ALA L 154 -1 N ALA L 154 O SER L 157 SHEET 3 AA6 4 TYR L 195 HIS L 201 -1 O GLU L 198 N VAL L 151 SHEET 4 AA6 4 SER L 204 VAL L 210 -1 O VAL L 206 N VAL L 199 SHEET 1 AA7 4 ARG H 5 SER H 7 0 SHEET 2 AA7 4 LEU H 18 THR H 23 -1 O THR H 21 N SER H 7 SHEET 3 AA7 4 GLN H 77 VAL H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 AA7 4 LEU H 67 ASP H 72 -1 N THR H 70 O SER H 79 SHEET 1 AA8 6 LEU H 11 VAL H 12 0 SHEET 2 AA8 6 LEU H 158 VAL H 162 1 O THR H 161 N VAL H 12 SHEET 3 AA8 6 ALA H 91 GLU H 101 -1 N ALA H 91 O VAL H 160 SHEET 4 AA8 6 ALA H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA8 6 GLU H 46 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA8 6 THR H 57 TYR H 59 -1 O GLY H 58 N SER H 50 SHEET 1 AA9 4 LEU H 11 VAL H 12 0 SHEET 2 AA9 4 LEU H 158 VAL H 162 1 O THR H 161 N VAL H 12 SHEET 3 AA9 4 ALA H 91 GLU H 101 -1 N ALA H 91 O VAL H 160 SHEET 4 AA9 4 GLU H 148 TRP H 154 -1 O GLU H 148 N GLU H 101 SHEET 1 AB1 4 LYS H 171 SER H 176 0 SHEET 2 AB1 4 VAL H 187 TYR H 196 -1 O SER H 194 N LYS H 171 SHEET 3 AB1 4 TYR H 227 VAL H 235 -1 O LEU H 229 N VAL H 193 SHEET 4 AB1 4 VAL H 214 THR H 216 -1 N HIS H 215 O MET H 232 SHEET 1 AB2 4 LYS H 171 SER H 176 0 SHEET 2 AB2 4 VAL H 187 TYR H 196 -1 O SER H 194 N LYS H 171 SHEET 3 AB2 4 TYR H 227 VAL H 235 -1 O LEU H 229 N VAL H 193 SHEET 4 AB2 4 VAL H 220 LEU H 221 -1 N VAL H 220 O SER H 228 SHEET 1 AB3 3 THR H 202 TRP H 205 0 SHEET 2 AB3 3 THR H 246 HIS H 251 -1 O ASN H 248 N THR H 204 SHEET 3 AB3 3 THR H 256 ALA H 261 -1 O VAL H 258 N VAL H 249 SSBOND 1 CYS L 22 CYS L 89 1555 1555 2.12 SSBOND 2 CYS L 138 CYS L 197 1555 1555 2.00 SSBOND 3 CYS L 215 CYS H 179 1555 1555 1.99 SSBOND 4 CYS H 22 CYS H 95 1555 1555 2.02 SSBOND 5 CYS H 178 CYS H 266 1555 1555 2.04 SSBOND 6 CYS H 191 CYS H 247 1555 1555 2.02 CISPEP 1 TYR L 144 PRO L 145 0 3.09 CISPEP 2 MET H 197 PRO H 198 0 -10.69 CISPEP 3 GLU H 199 PRO H 200 0 -10.40 CRYST1 161.160 49.045 60.381 90.00 90.87 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006205 0.000000 0.000095 0.00000 SCALE2 0.000000 0.020389 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016563 0.00000