HEADER IMMUNE SYSTEM 02-JUN-23 8P8S TITLE RECOMBINANT YM2 CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE-LIKE PROTEIN 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHITINASE-3-LIKE PROTEIN 4,SECRETED PROTEIN YM2; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE CDNA SEQUENCE ENCODING MURINE YM2 (UNIPROT Q91Z98, COMPND 7 RESIDUES 22 - 402) WAS CLONED IN THE PTWIST-CMV-BETAGLOBIN MAMMALIAN COMPND 8 EXPRESSION VECTOR, IN FRAME WITH THE MOUSE IGH SIGNAL PEPTIDE COMPND 9 (MGWSCIIFFLVATATGVHS), AND AN N-TERMINAL HEXAHISTINE-TAG FOLLOWED BY COMPND 10 A TOBACCO ETCH VIRUS (TEV)-PROTEASE CLEAVAGE SITE. YM2 WAS PURIFIED COMPND 11 VIA IMAC AND SEC. BEFORE CRYSTALLIZATION THE HIS-TAG WAS REMOVED BY COMPND 12 INCUBATION WITH TEV PROTEASE. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: CHIL4, CHI3L4, YM2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 FREESTYLE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PTWIST CMV BETAGLOBIN; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTWIST_SS_HIS_TEV_YM2 KEYWDS YM2, CHIL4, IN VIVO CRYSTALLIZATION, CHITINASE-LIKE PROTEIN, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR K.H.G.VERSCHUEREN,K.VERSTRAETE,I.HEYNDRICKX,U.SMOLE,A.AEGERTER, AUTHOR 2 S.N.SAVVIDES,B.N.LAMBRECHT REVDAT 2 24-JAN-24 8P8S 1 JRNL REVDAT 1 17-JAN-24 8P8S 0 JRNL AUTH I.HEYNDRICKX,K.DESWARTE,K.VERSTRAETE,K.H.G.VERSCHUEREN, JRNL AUTH 2 U.SMOLE,H.AEGERTER,A.DANSERCOER,H.HAMMAD,S.N.SAVVIDES, JRNL AUTH 3 B.N.LAMBRECHT JRNL TITL YM1 PROTEIN CRYSTALS PROMOTE TYPE 2 IMMUNITY. JRNL REF ELIFE V. 12 2024 JRNL REFN ESSN 2050-084X JRNL PMID 38194250 JRNL DOI 10.7554/ELIFE.90676 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH I.HEYNDRICKX,K.DESWARTE,K.VERSTRAETE,K.VERSCHUEREN,U.SMOLE, REMARK 1 AUTH 2 H.AEGERTER,A.DANSERCOER,H.HAMMAD,S.SAVVIDES,B.LAMBRECHT REMARK 1 TITL YM1 PROTEIN CRYSTALS PROMOTE TYPE 2 IMMUNITY REMARK 1 REF ELIFE 2023 REMARK 1 REFN ESSN 2050-084X REMARK 1 DOI 10.7554/ELIFE.90676.2 REMARK 2 REMARK 2 RESOLUTION. 1.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.45 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 119181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 5924 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.17 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.18 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.60 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2384 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1890 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2260 REMARK 3 BIN R VALUE (WORKING SET) : 0.1893 REMARK 3 BIN FREE R VALUE : 0.1839 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.20 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 124 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2974 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 24 REMARK 3 SOLVENT ATOMS : 582 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.86700 REMARK 3 B22 (A**2) : 0.20420 REMARK 3 B33 (A**2) : 0.66290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.06060 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.120 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.037 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.037 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.037 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.034 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6170 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11117 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1332 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 987 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6170 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 1 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 401 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 7550 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.07 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 5.22 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.25 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|1 - A|166 } REMARK 3 ORIGIN FOR THE GROUP (A): 34.1649 18.4784 11.4558 REMARK 3 T TENSOR REMARK 3 T11: 0.0044 T22: -0.0077 REMARK 3 T33: -0.0003 T12: -0.0014 REMARK 3 T13: -0.0012 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.0327 L22: 0.1039 REMARK 3 L33: 0.0035 L12: -0.0438 REMARK 3 L13: 0.0254 L23: -0.0193 REMARK 3 S TENSOR REMARK 3 S11: -0.0046 S12: -0.0064 S13: 0.0001 REMARK 3 S21: -0.0072 S22: 0.0042 S23: 0.0173 REMARK 3 S31: -0.0099 S32: 0.0029 S33: 0.0004 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|167 - A|213 } REMARK 3 ORIGIN FOR THE GROUP (A): 51.4862 10.4925 19.4579 REMARK 3 T TENSOR REMARK 3 T11: 0.0049 T22: -0.0035 REMARK 3 T33: -0.0021 T12: -0.0003 REMARK 3 T13: -0.0044 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.0051 L22: 0.1822 REMARK 3 L33: 0.0074 L12: -0.0582 REMARK 3 L13: 0.0515 L23: 0.0086 REMARK 3 S TENSOR REMARK 3 S11: -0.0116 S12: -0.0066 S13: -0.0135 REMARK 3 S21: 0.0043 S22: 0.0115 S23: -0.0034 REMARK 3 S31: -0.0144 S32: 0.0045 S33: 0.0001 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { A|214 - A|356 } REMARK 3 ORIGIN FOR THE GROUP (A): 46.7211 -2.8821 15.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: -0.0071 REMARK 3 T33: -0.0039 T12: -0.0001 REMARK 3 T13: -0.0018 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.0505 L22: 0.0567 REMARK 3 L33: 0.0305 L12: -0.0459 REMARK 3 L13: -0.0010 L23: -0.0657 REMARK 3 S TENSOR REMARK 3 S11: -0.0115 S12: 0.0012 S13: -0.0010 REMARK 3 S21: 0.0062 S22: 0.0053 S23: 0.0048 REMARK 3 S31: 0.0161 S32: 0.0028 S33: 0.0062 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { A|357 - A|374 } REMARK 3 ORIGIN FOR THE GROUP (A): 29.1830 -0.5690 25.0016 REMARK 3 T TENSOR REMARK 3 T11: 0.0053 T22: 0.0045 REMARK 3 T33: -0.0120 T12: -0.0018 REMARK 3 T13: 0.0166 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.2931 L22: 0.0000 REMARK 3 L33: 0.1501 L12: -0.1788 REMARK 3 L13: -0.0348 L23: -0.1467 REMARK 3 S TENSOR REMARK 3 S11: 0.0741 S12: -0.0307 S13: -0.0143 REMARK 3 S21: 0.0102 S22: 0.0499 S23: -0.0259 REMARK 3 S31: -0.0033 S32: -0.0149 S33: -0.1240 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8P8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292130881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : 0.9763 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS VERSION MAR 15, 2019 REMARK 200 BUILT=20190315 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 119183 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.170 REMARK 200 RESOLUTION RANGE LOW (A) : 59.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 6.760 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 6.0 AND 200 MM REMARK 280 CACL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.95000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -42 REMARK 465 GLY A -41 REMARK 465 TRP A -40 REMARK 465 SER A -39 REMARK 465 CYS A -38 REMARK 465 ILE A -37 REMARK 465 ILE A -36 REMARK 465 PHE A -35 REMARK 465 PHE A -34 REMARK 465 LEU A -33 REMARK 465 VAL A -32 REMARK 465 ALA A -31 REMARK 465 THR A -30 REMARK 465 ALA A -29 REMARK 465 THR A -28 REMARK 465 GLY A -27 REMARK 465 VAL A -26 REMARK 465 HIS A -25 REMARK 465 SER A -24 REMARK 465 ALA A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 PRO A -16 REMARK 465 GLY A -15 REMARK 465 GLY A -14 REMARK 465 PRO A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 GLU A -10 REMARK 465 ASN A -9 REMARK 465 LEU A -8 REMARK 465 TYR A -7 REMARK 465 PHE A -6 REMARK 465 GLN A -5 REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 THR A -1 REMARK 465 ALA A 375 REMARK 465 SER A 376 REMARK 465 TYR A 377 REMARK 465 ARG A 378 REMARK 465 GLY A 379 REMARK 465 GLU A 380 REMARK 465 LEU A 381 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 16 -116.14 34.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1078 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH A1079 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1080 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A1081 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH A1082 DISTANCE = 8.11 ANGSTROMS DBREF 8P8S A 1 381 UNP Q91Z98 CHIL4_MOUSE 22 402 SEQADV 8P8S MET A -42 UNP Q91Z98 INITIATING METHIONINE SEQADV 8P8S GLY A -41 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S TRP A -40 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S SER A -39 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S CYS A -38 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ILE A -37 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ILE A -36 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S PHE A -35 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S PHE A -34 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S LEU A -33 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S VAL A -32 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ALA A -31 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S THR A -30 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ALA A -29 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S THR A -28 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -27 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S VAL A -26 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -25 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S SER A -24 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ALA A -23 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -22 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -21 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -20 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -19 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -18 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S HIS A -17 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S PRO A -16 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -15 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -14 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S PRO A -13 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -12 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S SER A -11 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLU A -10 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S ASN A -9 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S LEU A -8 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S TYR A -7 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S PHE A -6 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLN A -5 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -4 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A -3 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S SER A -2 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S THR A -1 UNP Q91Z98 EXPRESSION TAG SEQADV 8P8S GLY A 0 UNP Q91Z98 EXPRESSION TAG SEQRES 1 A 424 MET GLY TRP SER CYS ILE ILE PHE PHE LEU VAL ALA THR SEQRES 2 A 424 ALA THR GLY VAL HIS SER ALA HIS HIS HIS HIS HIS HIS SEQRES 3 A 424 PRO GLY GLY PRO GLY SER GLU ASN LEU TYR PHE GLN GLY SEQRES 4 A 424 GLY SER THR GLY TYR GLN LEU MET CYS TYR TYR THR SER SEQRES 5 A 424 TRP ALA LYS ASP ARG PRO THR GLU GLY SER PHE LYS PRO SEQRES 6 A 424 GLY ASN ILE ASP PRO CYS LEU CYS THR HIS LEU ILE TYR SEQRES 7 A 424 ALA PHE ALA GLY MET LYS ASN ASN GLU ILE THR TYR LEU SEQRES 8 A 424 SER GLU GLN ASP LEU ARG ASP TYR GLU ALA LEU ASN GLY SEQRES 9 A 424 LEU LYS ASP ARG ASN THR GLU LEU LYS THR LEU LEU ALA SEQRES 10 A 424 ILE GLY GLY TRP LYS PHE GLY PRO ALA PRO PHE SER SER SEQRES 11 A 424 MET VAL SER THR PRO GLN ASN ARG GLN THR PHE ILE LYS SEQRES 12 A 424 SER VAL ILE ARG PHE LEU ARG GLN TYR ASN PHE ASP GLY SEQRES 13 A 424 LEU ASN LEU ASP TRP GLN TYR PRO GLY SER ARG GLY SER SEQRES 14 A 424 PRO PRO LYS ASP LYS HIS LEU PHE SER VAL LEU VAL GLN SEQRES 15 A 424 GLU MET ARG LYS ALA PHE GLU GLU GLU SER THR LEU ASN SEQRES 16 A 424 HIS ILE PRO ARG LEU LEU LEU THR SER THR GLY ALA GLY SEQRES 17 A 424 PHE ILE ASP VAL ILE LYS SER GLY TYR LYS ILE PRO GLU SEQRES 18 A 424 LEU SER GLN SER LEU ASP TYR ILE GLN VAL MET THR TYR SEQRES 19 A 424 ASP LEU HIS ASP PRO LYS ASN GLY TYR THR GLY GLU ASN SEQRES 20 A 424 SER PRO LEU TYR LYS SER PRO TYR ASP ILE GLY LYS SER SEQRES 21 A 424 ALA ASP LEU ASN VAL ASP SER ILE ILE THR TYR TRP LYS SEQRES 22 A 424 ASP HIS GLY ALA ALA SER GLU LYS LEU ILE VAL GLY PHE SEQRES 23 A 424 PRO ALA TYR GLY HIS THR PHE ILE LEU SER ASP PRO SER SEQRES 24 A 424 LYS ASN GLY ILE GLY ASP PRO THR VAL SER ALA GLY PRO SEQRES 25 A 424 PRO GLY LYS TYR THR ASN GLU GLN GLY LEU LEU ALA TYR SEQRES 26 A 424 PHE GLU ILE CYS THR PHE LEU ASN GLU GLY ALA THR GLU SEQRES 27 A 424 ILE PHE ASP ALA THR GLN GLU VAL PRO TYR ALA TYR LEU SEQRES 28 A 424 GLY ASN GLU TRP VAL GLY TYR ASP ASN VAL ARG SER PHE SEQRES 29 A 424 LYS LEU LYS ALA GLN TRP LEU LYS ASP ASN ASN LEU GLY SEQRES 30 A 424 GLY ALA VAL VAL TRP PRO LEU ASP MET ASP ASP PHE SER SEQRES 31 A 424 GLY SER PHE CYS HIS GLN GLY ARG PHE PRO LEU THR THR SEQRES 32 A 424 THR LEU LYS ARG ASP LEU ASN VAL HIS SER ALA SER CYS SEQRES 33 A 424 LYS ALA SER TYR ARG GLY GLU LEU HET EDO A 401 10 HET EDO A 402 10 HET EDO A 403 10 HET EDO A 404 10 HET EDO A 405 10 HET EDO A 406 10 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 6(C2 H6 O2) FORMUL 8 HOH *582(H2 O) HELIX 1 AA1 TRP A 10 ARG A 14 5 5 HELIX 2 AA2 PRO A 15 SER A 19 5 5 HELIX 3 AA3 LYS A 21 ILE A 25 5 5 HELIX 4 AA4 SER A 49 LEU A 62 1 14 HELIX 5 AA5 LYS A 63 ARG A 65 5 3 HELIX 6 AA6 PRO A 82 SER A 90 1 9 HELIX 7 AA7 THR A 91 TYR A 109 1 19 HELIX 8 AA8 PRO A 128 HIS A 153 1 26 HELIX 9 AA9 PHE A 166 TYR A 174 1 9 HELIX 10 AB1 LYS A 175 LEU A 183 1 9 HELIX 11 AB2 ASP A 195 GLY A 199 5 5 HELIX 12 AB3 ILE A 214 LEU A 220 5 7 HELIX 13 AB4 ASN A 221 HIS A 232 1 12 HELIX 14 AB5 ALA A 235 GLU A 237 5 3 HELIX 15 AB6 TYR A 282 GLU A 291 1 10 HELIX 16 AB7 ASN A 317 ASN A 331 1 15 HELIX 17 AB8 PRO A 340 ASP A 344 5 5 HELIX 18 AB9 PHE A 356 LEU A 366 1 11 HELIX 19 AC1 SER A 370 LYS A 374 5 5 SHEET 1 AA110 GLU A 44 THR A 46 0 SHEET 2 AA110 HIS A 32 LYS A 41 -1 N GLY A 39 O THR A 46 SHEET 3 AA110 LYS A 70 GLY A 76 1 O ALA A 74 N ALA A 38 SHEET 4 AA110 GLY A 113 ASP A 117 1 O ASN A 115 N LEU A 73 SHEET 5 AA110 LEU A 158 GLY A 163 1 O THR A 160 N LEU A 116 SHEET 6 AA110 TYR A 185 VAL A 188 1 O GLN A 187 N SER A 161 SHEET 7 AA110 LEU A 239 PRO A 244 1 O ILE A 240 N ILE A 186 SHEET 8 AA110 GLY A 335 TRP A 339 1 O VAL A 337 N PHE A 243 SHEET 9 AA110 GLN A 2 THR A 8 1 N MET A 4 O ALA A 336 SHEET 10 AA110 HIS A 32 LYS A 41 1 O ILE A 34 N TYR A 7 SHEET 1 AA2 3 THR A 264 ALA A 267 0 SHEET 2 AA2 3 TYR A 246 LEU A 252 -1 N ILE A 251 O VAL A 265 SHEET 3 AA2 3 LEU A 279 ALA A 281 -1 O LEU A 280 N GLY A 247 SHEET 1 AA3 5 THR A 264 ALA A 267 0 SHEET 2 AA3 5 TYR A 246 LEU A 252 -1 N ILE A 251 O VAL A 265 SHEET 3 AA3 5 GLU A 311 GLY A 314 -1 O TRP A 312 N PHE A 250 SHEET 4 AA3 5 VAL A 303 LEU A 308 -1 N ALA A 306 O VAL A 313 SHEET 5 AA3 5 THR A 294 ASP A 298 -1 N ILE A 296 O TYR A 305 SSBOND 1 CYS A 5 CYS A 30 1555 1555 2.05 SSBOND 2 CYS A 28 CYS A 373 1555 1555 2.03 SSBOND 3 CYS A 286 CYS A 351 1555 1555 2.03 CISPEP 1 ALA A 36 PHE A 37 0 0.68 CISPEP 2 GLN A 119 TYR A 120 0 2.33 CISPEP 3 TRP A 339 PRO A 340 0 -23.31 CRYST1 51.090 59.900 59.880 90.00 94.14 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019573 0.000000 0.001417 0.00000 SCALE2 0.000000 0.016694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016744 0.00000