HEADER MOTOR PROTEIN 12-JUN-23 8PDK TITLE X-RAY STRUCTURE OF THE THERMUS THERMOPHILUS PILF-GSPIIB DOMAIN IN THE TITLE 2 C-DI-GMP BOUND STATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: C-DI-GMP BINDING DOMAIN OF THE ATPASE ENZYME PILF; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS HB27; SOURCE 3 ORGANISM_TAXID: 262724; SOURCE 4 GENE: PILF, TT_C1622; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PILT CLASS, GSPII, LIGAND BINDING, C-DI-GMP, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.NEISSNER,J.WOEHNERT REVDAT 1 26-JUN-24 8PDK 0 JRNL AUTH K.NEISSNER,J.WOEHNERT JRNL TITL X-RAY STRUCTURE OF THE PILF-GSPIIB DOMAIN IN THE C-DI-GMP JRNL TITL 2 BOUND STATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 25928 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1480 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3300 - 4.4500 0.97 4458 133 0.1468 0.1638 REMARK 3 2 4.4400 - 3.5300 0.98 4494 140 0.1457 0.1824 REMARK 3 3 3.5300 - 3.0800 0.99 4511 136 0.1760 0.1946 REMARK 3 4 3.0800 - 2.8000 0.98 4504 139 0.2043 0.2363 REMARK 3 5 2.8000 - 2.6000 0.98 4457 136 0.2037 0.2693 REMARK 3 6 2.6000 - 2.4500 0.97 4430 134 0.2101 0.2753 REMARK 3 7 2.4500 - 2.3300 0.99 4521 135 0.1932 0.2442 REMARK 3 8 2.3300 - 2.2200 1.00 4540 135 0.2071 0.2437 REMARK 3 9 2.2200 - 2.1400 0.99 4534 130 0.2268 0.2940 REMARK 3 10 2.1400 - 2.0600 0.99 4587 130 0.2589 0.3102 REMARK 3 11 2.0600 - 2.0000 0.99 4565 132 0.2878 0.3199 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.242 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.477 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.88 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2341 REMARK 3 ANGLE : 1.088 3191 REMARK 3 CHIRALITY : 0.056 352 REMARK 3 PLANARITY : 0.006 401 REMARK 3 DIHEDRAL : 22.620 308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -22.2051 22.9772 6.8706 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.2668 REMARK 3 T33: 0.2217 T12: 0.0140 REMARK 3 T13: 0.0321 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.5322 L22: 0.5658 REMARK 3 L33: 0.4253 L12: -0.4912 REMARK 3 L13: -0.3731 L23: 0.1596 REMARK 3 S TENSOR REMARK 3 S11: 0.0283 S12: 0.0484 S13: 0.0236 REMARK 3 S21: 0.0333 S22: 0.0159 S23: 0.0167 REMARK 3 S31: -0.0348 S32: -0.0034 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PDK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292130693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25934 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 41.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.03878 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66460 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 M LITHIUMSULFATE 0.1 M REMARK 280 SODIUMACETATE PH 5.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.06900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.21675 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.30733 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 54.06900 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 31.21675 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.30733 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 54.06900 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 31.21675 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.30733 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.43350 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 58.61467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 62.43350 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 58.61467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 62.43350 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 58.61467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 424 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 460 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 157 REMARK 465 SER A 158 REMARK 465 SER A 159 REMARK 465 GLY A 160 REMARK 465 GLU A 161 REMARK 465 GLY A 162 REMARK 465 LYS A 302 REMARK 465 GLY B 157 REMARK 465 SER B 158 REMARK 465 SER B 159 REMARK 465 GLY B 160 REMARK 465 GLU B 161 REMARK 465 GLY B 162 REMARK 465 GLN B 163 REMARK 465 LYS B 164 REMARK 465 LYS B 302 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 163 CG CD OE1 NE2 REMARK 470 LYS A 164 CG CD CE NZ REMARK 470 ARG A 180 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 181 CG CD OE1 OE2 REMARK 470 GLU A 184 CG CD OE1 OE2 REMARK 470 GLU A 185 CG CD OE1 OE2 REMARK 470 LYS A 192 CG CD CE NZ REMARK 470 ARG A 199 CD NE CZ NH1 NH2 REMARK 470 GLN A 256 CG CD OE1 NE2 REMARK 470 ARG A 282 NE CZ NH1 NH2 REMARK 470 GLN A 289 OE1 NE2 REMARK 470 GLU B 181 CG CD OE1 OE2 REMARK 470 GLU B 191 CD OE1 OE2 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 ARG B 282 NE CZ NH1 NH2 REMARK 470 GLN B 301 CG CD OE1 NE2 REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 494 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH B 495 DISTANCE = 9.40 ANGSTROMS DBREF 8PDK A 159 302 UNP Q72H73 Q72H73_THET2 159 302 DBREF 8PDK B 159 302 UNP Q72H73 Q72H73_THET2 159 302 SEQADV 8PDK GLY A 157 UNP Q72H73 EXPRESSION TAG SEQADV 8PDK SER A 158 UNP Q72H73 EXPRESSION TAG SEQADV 8PDK GLY B 157 UNP Q72H73 EXPRESSION TAG SEQADV 8PDK SER B 158 UNP Q72H73 EXPRESSION TAG SEQRES 1 A 146 GLY SER SER GLY GLU GLY GLN LYS ASP LEU LYS LEU GLY SEQRES 2 A 146 GLU LEU LEU LEU GLN LYS GLY TRP ILE SER ARG GLU ALA SEQRES 3 A 146 LEU GLU GLU ALA LEU VAL GLU GLN GLU LYS THR GLY ASP SEQRES 4 A 146 LEU LEU GLY ARG ILE LEU VAL ARG LYS GLY LEU PRO GLU SEQRES 5 A 146 GLU ALA LEU TYR ARG ALA LEU ALA GLU GLN LYS GLY LEU SEQRES 6 A 146 GLU PHE LEU GLU SER THR GLU GLY ILE VAL PRO ASP PRO SEQRES 7 A 146 SER ALA ALA LEU LEU LEU LEU ARG SER ASP ALA LEU ARG SEQRES 8 A 146 TYR GLY ALA VAL PRO ILE GLY PHE GLN ASN GLY GLU VAL SEQRES 9 A 146 GLU VAL VAL LEU SER ASP PRO ARG HIS LYS GLU ALA VAL SEQRES 10 A 146 ALA GLN LEU LEU ASN ARG PRO ALA ARG PHE TYR LEU ALA SEQRES 11 A 146 LEU PRO GLN ALA TRP GLU GLU LEU PHE ARG ARG ALA TYR SEQRES 12 A 146 PRO GLN LYS SEQRES 1 B 146 GLY SER SER GLY GLU GLY GLN LYS ASP LEU LYS LEU GLY SEQRES 2 B 146 GLU LEU LEU LEU GLN LYS GLY TRP ILE SER ARG GLU ALA SEQRES 3 B 146 LEU GLU GLU ALA LEU VAL GLU GLN GLU LYS THR GLY ASP SEQRES 4 B 146 LEU LEU GLY ARG ILE LEU VAL ARG LYS GLY LEU PRO GLU SEQRES 5 B 146 GLU ALA LEU TYR ARG ALA LEU ALA GLU GLN LYS GLY LEU SEQRES 6 B 146 GLU PHE LEU GLU SER THR GLU GLY ILE VAL PRO ASP PRO SEQRES 7 B 146 SER ALA ALA LEU LEU LEU LEU ARG SER ASP ALA LEU ARG SEQRES 8 B 146 TYR GLY ALA VAL PRO ILE GLY PHE GLN ASN GLY GLU VAL SEQRES 9 B 146 GLU VAL VAL LEU SER ASP PRO ARG HIS LYS GLU ALA VAL SEQRES 10 B 146 ALA GLN LEU LEU ASN ARG PRO ALA ARG PHE TYR LEU ALA SEQRES 11 B 146 LEU PRO GLN ALA TRP GLU GLU LEU PHE ARG ARG ALA TYR SEQRES 12 B 146 PRO GLN LYS HET C2E A 350 46 HET SO4 A 351 5 HET SO4 A 352 5 HET SO4 A 353 5 HET ACT A 354 4 HET ACT A 355 4 HET ACT A 356 4 HET ACT A 357 4 HET ACT A 358 4 HET ACT A 359 4 HET ACT A 360 4 HET ACT A 361 4 HET C2E B 350 46 HET SO4 B 351 5 HET SO4 B 352 5 HET SO4 B 353 5 HET SO4 B 354 5 HET ACT B 355 4 HET ACT B 356 4 HET ACT B 357 4 HET ACT B 358 4 HET ACT B 359 4 HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 C2E 2(C20 H24 N10 O14 P2) FORMUL 4 SO4 7(O4 S 2-) FORMUL 7 ACT 13(C2 H3 O2 1-) FORMUL 25 HOH *178(H2 O) HELIX 1 AA1 LYS A 167 LYS A 175 1 9 HELIX 2 AA2 SER A 179 GLY A 194 1 16 HELIX 3 AA3 LEU A 196 LYS A 204 1 9 HELIX 4 AA4 PRO A 207 LYS A 219 1 13 HELIX 5 AA5 ASP A 233 LEU A 238 1 6 HELIX 6 AA6 LEU A 241 GLY A 249 1 9 HELIX 7 AA7 ASP A 266 ARG A 268 5 3 HELIX 8 AA8 HIS A 269 ASN A 278 1 10 HELIX 9 AA9 LEU A 287 TYR A 299 1 13 HELIX 10 AB1 LYS B 167 GLY B 176 1 10 HELIX 11 AB2 SER B 179 GLY B 194 1 16 HELIX 12 AB3 LEU B 196 LYS B 204 1 9 HELIX 13 AB4 PRO B 207 LYS B 219 1 13 HELIX 14 AB5 ASP B 233 LEU B 238 1 6 HELIX 15 AB6 LEU B 241 GLY B 249 1 9 HELIX 16 AB7 ASP B 266 ARG B 268 5 3 HELIX 17 AB8 HIS B 269 ASN B 278 1 10 HELIX 18 AB9 LEU B 287 TYR B 299 1 13 SHEET 1 AA1 4 GLU A 222 LEU A 224 0 SHEET 2 AA1 4 ALA A 281 ALA A 286 1 O LEU A 285 N LEU A 224 SHEET 3 AA1 4 GLU A 259 LEU A 264 1 N LEU A 264 O TYR A 284 SHEET 4 AA1 4 ALA A 250 GLN A 256 -1 N GLY A 254 O GLU A 261 SHEET 1 AA2 4 GLU B 222 PHE B 223 0 SHEET 2 AA2 4 ALA B 281 LEU B 285 1 O LEU B 285 N GLU B 222 SHEET 3 AA2 4 GLU B 259 LEU B 264 1 N LEU B 264 O TYR B 284 SHEET 4 AA2 4 ALA B 250 GLN B 256 -1 N GLY B 254 O GLU B 261 LINK CH3 ACT A 354 OXT ACT A 357 1555 2555 1.38 CRYST1 108.138 108.138 87.922 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009247 0.005339 0.000000 0.00000 SCALE2 0.000000 0.010678 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011374 0.00000