HEADER HYDROLASE 22-JUN-23 8PIW TITLE CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME CO-CRYSTALLIZED WITH 10 MM TITLE 2 TBXO4-NMET2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME C; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 1,4-BETA-N-ACETYLMURAMIDASE C,ALLERGEN GAL D IV; COMPND 5 EC: 3.2.1.17 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031 KEYWDS HEWL, CRYSTALLOPHORE VARIANTS, NUCLEATING AGENT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.ALSALMAN,E.GIRARD REVDAT 2 17-JUL-24 8PIW 1 JRNL REVDAT 1 10-JUL-24 8PIW 0 JRNL AUTH A.ROUX,Z.ALSALMAN,T.JIANG,J.C.MULATIER,D.PITRAT,E.DUMONT, JRNL AUTH 2 F.RIOBE,N.GILLET,E.GIRARD,O.MAURY JRNL TITL INFLUENCE OF CHEMICAL MODIFICATIONS OF THE CRYSTALLOPHORE ON JRNL TITL 2 PROTEIN NUCLEATING PROPERTIES AND SUPRAMOLECULAR JRNL TITL 3 INTERACTIONS NETWORK. JRNL REF CHEMISTRY V. 30 00900 2024 JRNL REFN ISSN 0947-6539 JRNL PMID 38738452 JRNL DOI 10.1002/CHEM.202400900 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.ENGILBERGE,F.RIOBE,S.DI PIETRO,L.LASSALLE,N.COQUELLE, REMARK 1 AUTH 2 C.A.ARNAUD,D.PITRAT,J.C.MULATIER,D.MADERN,C.BREYTON,O.MAURY, REMARK 1 AUTH 3 E.GIRARD REMARK 1 TITL CRYSTALLOPHORE: A VERSATILE LANTHANIDE COMPLEX FOR PROTEIN REMARK 1 TITL 2 CRYSTALLOGRAPHY COMBINING NUCLEATING EFFECTS, PHASING REMARK 1 TITL 3 PROPERTIES, AND LUMINESCENCE. REMARK 1 REF CHEM SCI V. 8 5909 2017 REMARK 1 REFN ISSN 2041-6520 REMARK 1 PMID 29619195 REMARK 1 DOI 10.1039/C7SC00758B REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12624 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 632 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7600 - 2.9500 1.00 2541 134 0.1619 0.1788 REMARK 3 2 2.9500 - 2.3400 1.00 2403 126 0.1694 0.1940 REMARK 3 3 2.3400 - 2.0400 1.00 2376 126 0.1636 0.2009 REMARK 3 4 2.0400 - 1.8600 1.00 2350 124 0.1743 0.2163 REMARK 3 5 1.8600 - 1.7200 1.00 2322 122 0.3084 0.3505 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.223 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.165 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 1080 REMARK 3 ANGLE : 0.999 1464 REMARK 3 CHIRALITY : 0.056 150 REMARK 3 PLANARITY : 0.008 189 REMARK 3 DIHEDRAL : 12.114 384 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6214 -19.8738 -4.8900 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.2492 REMARK 3 T33: 0.2146 T12: 0.0218 REMARK 3 T13: 0.0260 T23: 0.0767 REMARK 3 L TENSOR REMARK 3 L11: 0.3738 L22: 0.3364 REMARK 3 L33: 0.3634 L12: -0.2037 REMARK 3 L13: -0.1554 L23: 0.1572 REMARK 3 S TENSOR REMARK 3 S11: 0.1262 S12: 0.2480 S13: 0.1461 REMARK 3 S21: 0.0037 S22: -0.1860 S23: -0.1829 REMARK 3 S31: -0.0397 S32: 0.1381 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.1858 -19.3516 5.1503 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.1939 REMARK 3 T33: 0.2282 T12: -0.0016 REMARK 3 T13: 0.0616 T23: 0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.0416 L22: 0.0028 REMARK 3 L33: 0.2847 L12: -0.0093 REMARK 3 L13: 0.1091 L23: -0.0203 REMARK 3 S TENSOR REMARK 3 S11: 0.0334 S12: 0.0621 S13: -0.0466 REMARK 3 S21: 0.0306 S22: -0.1226 S23: 0.2179 REMARK 3 S31: 0.4171 S32: 0.2925 S33: 0.0199 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7404 -15.1450 9.5030 REMARK 3 T TENSOR REMARK 3 T11: 0.2269 T22: 0.2183 REMARK 3 T33: 0.2047 T12: 0.0560 REMARK 3 T13: 0.0125 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.2317 L22: 0.1704 REMARK 3 L33: 0.1687 L12: 0.1578 REMARK 3 L13: 0.1795 L23: 0.1443 REMARK 3 S TENSOR REMARK 3 S11: -0.1705 S12: -0.1119 S13: 0.0449 REMARK 3 S21: 0.2389 S22: 0.0280 S23: 0.0351 REMARK 3 S31: 0.1811 S32: 0.0852 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5804 -12.9625 3.3593 REMARK 3 T TENSOR REMARK 3 T11: 0.2414 T22: 0.2335 REMARK 3 T33: 0.2934 T12: 0.0068 REMARK 3 T13: -0.0100 T23: 0.0524 REMARK 3 L TENSOR REMARK 3 L11: 0.0562 L22: 0.0798 REMARK 3 L33: 0.0562 L12: 0.0665 REMARK 3 L13: 0.0651 L23: 0.0759 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: 0.0274 S13: 0.3225 REMARK 3 S21: 0.0685 S22: -0.0220 S23: -0.2034 REMARK 3 S31: -0.1102 S32: 0.1427 S33: 0.0004 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0495 -29.0176 3.9112 REMARK 3 T TENSOR REMARK 3 T11: 0.1947 T22: 0.2347 REMARK 3 T33: 0.1716 T12: 0.0169 REMARK 3 T13: 0.0128 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.0250 L22: 0.1773 REMARK 3 L33: 0.1062 L12: -0.0029 REMARK 3 L13: 0.0428 L23: -0.0560 REMARK 3 S TENSOR REMARK 3 S11: -0.2503 S12: -0.2495 S13: 0.1075 REMARK 3 S21: 0.1023 S22: 0.0409 S23: 0.2228 REMARK 3 S31: -0.0716 S32: -0.5634 S33: -0.0020 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6708 -28.2371 -10.4082 REMARK 3 T TENSOR REMARK 3 T11: 0.2090 T22: 0.3980 REMARK 3 T33: 0.2220 T12: 0.0785 REMARK 3 T13: 0.0604 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.2624 L22: 0.0149 REMARK 3 L33: 1.5058 L12: -0.0437 REMARK 3 L13: -0.5817 L23: 0.0418 REMARK 3 S TENSOR REMARK 3 S11: 0.1531 S12: 0.2715 S13: -0.0915 REMARK 3 S21: -0.3144 S22: -0.0761 S23: -0.1050 REMARK 3 S31: 0.3705 S32: 0.3437 S33: 0.2833 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PIW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUN-23. REMARK 100 THE DEPOSITION ID IS D_1292130299. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.6480 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12670 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 38.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 24.20 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 0.2420 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 23.50 REMARK 200 R MERGE FOR SHELL (I) : 0.61700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.062 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 950 MM SODIUM CHLORIDE, 100MM SODIUM REMARK 280 ACETATE PH=4.6. DROPS WERE SET BY MIXING ONE VOLUME OF PROTEIN REMARK 280 SOLUTION AT 20MG/ML WITH ONE VOLUME OF 10MM TBXO4 AND WITH ONE REMARK 280 VOLUME OF THE WELL SOLUTION., PH 4.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 18.89650 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.76050 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.76050 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.34475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.76050 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.76050 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.44825 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.76050 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.76050 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.34475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.76050 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.76050 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 9.44825 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 18.89650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 343 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 345 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 408 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 428 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ARG A -16 REMARK 465 SER A -15 REMARK 465 LEU A -14 REMARK 465 LEU A -13 REMARK 465 ILE A -12 REMARK 465 LEU A -11 REMARK 465 VAL A -10 REMARK 465 LEU A -9 REMARK 465 CYS A -8 REMARK 465 PHE A -7 REMARK 465 LEU A -6 REMARK 465 PRO A -5 REMARK 465 LEU A -4 REMARK 465 ALA A -3 REMARK 465 ALA A -2 REMARK 465 LEU A -1 REMARK 465 GLY A 0 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 209 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 60 O REMARK 620 2 CYS A 64 O 89.0 REMARK 620 3 SER A 72 OG 87.0 168.7 REMARK 620 4 ARG A 73 O 91.8 89.2 101.4 REMARK 620 5 HOH A 373 O 103.5 88.5 82.2 164.5 REMARK 620 6 HOH A 384 O 172.2 98.1 86.6 85.1 80.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 201 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 101 OD1 REMARK 620 2 ASP A 101 OD2 54.4 REMARK 620 3 ZHT A 202 N1 134.9 82.1 REMARK 620 4 ZHT A 202 O3 63.4 74.7 97.2 REMARK 620 5 ZHT A 202 O1 68.6 122.7 154.7 85.9 REMARK 620 6 ZHT A 202 N5 120.4 139.3 83.8 69.6 73.7 REMARK 620 7 ZHT A 202 N2 166.1 130.7 55.4 128.9 103.5 65.6 REMARK 620 8 ZHT A 202 N4 68.9 91.0 129.2 129.4 61.4 126.7 97.4 REMARK 620 9 ZHT A 202 N3 109.1 80.6 69.6 153.5 116.1 128.7 63.2 59.6 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8OWC RELATED DB: PDB REMARK 900 8OWC CONTAINS THE SAME FAMILY OF CRYSTALLOPHORE MOLECULES REMARK 900 RELATED ID: 8P2Q RELATED DB: PDB REMARK 900 8P2Q CONTAINS THE SAME FAMILY OF CRYSTALLOPHORE MOLECULES DBREF 8PIW A -17 129 UNP P00698 LYSC_CHICK 1 147 SEQRES 1 A 147 MET ARG SER LEU LEU ILE LEU VAL LEU CYS PHE LEU PRO SEQRES 2 A 147 LEU ALA ALA LEU GLY LYS VAL PHE GLY ARG CYS GLU LEU SEQRES 3 A 147 ALA ALA ALA MET LYS ARG HIS GLY LEU ASP ASN TYR ARG SEQRES 4 A 147 GLY TYR SER LEU GLY ASN TRP VAL CYS ALA ALA LYS PHE SEQRES 5 A 147 GLU SER ASN PHE ASN THR GLN ALA THR ASN ARG ASN THR SEQRES 6 A 147 ASP GLY SER THR ASP TYR GLY ILE LEU GLN ILE ASN SER SEQRES 7 A 147 ARG TRP TRP CYS ASN ASP GLY ARG THR PRO GLY SER ARG SEQRES 8 A 147 ASN LEU CYS ASN ILE PRO CYS SER ALA LEU LEU SER SER SEQRES 9 A 147 ASP ILE THR ALA SER VAL ASN CYS ALA LYS LYS ILE VAL SEQRES 10 A 147 SER ASP GLY ASN GLY MET ASN ALA TRP VAL ALA TRP ARG SEQRES 11 A 147 ASN ARG CYS LYS GLY THR ASP VAL GLN ALA TRP ILE ARG SEQRES 12 A 147 GLY CYS ARG LEU HET TB A 201 1 HET ZHT A 202 69 HET CL A 203 1 HET CL A 204 1 HET CL A 205 1 HET CL A 206 1 HET CL A 207 1 HET CL A 208 1 HET NA A 209 1 HETNAM TB TERBIUM(III) ION HETNAM ZHT 6-[[4-[(6-CARBOXYPYRIDIN-2-YL)METHYL]-7-[3- HETNAM 2 ZHT (DIMETHYLAMINO)PROPYL]-1,4,7-TRIAZONAN-1- HETNAM 3 ZHT YL]METHYL]PYRIDINE-2-CARBOXYLIC ACID HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 TB TB 3+ FORMUL 3 ZHT C25 H36 N6 O4 FORMUL 4 CL 6(CL 1-) FORMUL 10 NA NA 1+ FORMUL 11 HOH *131(H2 O) HELIX 1 AA1 GLY A 4 HIS A 15 1 12 HELIX 2 AA2 ASN A 19 TYR A 23 5 5 HELIX 3 AA3 SER A 24 ASN A 37 1 14 HELIX 4 AA4 PRO A 79 SER A 85 5 7 HELIX 5 AA5 ILE A 88 SER A 100 1 13 HELIX 6 AA6 ASN A 103 ALA A 107 5 5 HELIX 7 AA7 TRP A 108 CYS A 115 1 8 HELIX 8 AA8 ASP A 119 ARG A 125 5 7 SHEET 1 AA1 3 THR A 43 ARG A 45 0 SHEET 2 AA1 3 THR A 51 TYR A 53 -1 O ASP A 52 N ASN A 44 SHEET 3 AA1 3 ILE A 58 ASN A 59 -1 O ILE A 58 N TYR A 53 SSBOND 1 CYS A 6 CYS A 127 1555 1555 2.03 SSBOND 2 CYS A 30 CYS A 115 1555 1555 2.04 SSBOND 3 CYS A 64 CYS A 80 1555 1555 2.05 SSBOND 4 CYS A 76 CYS A 94 1555 1555 2.04 LINK O SER A 60 NA NA A 209 1555 1555 2.34 LINK O CYS A 64 NA NA A 209 1555 1555 2.46 LINK OG SER A 72 NA NA A 209 1555 1555 2.54 LINK O ARG A 73 NA NA A 209 1555 1555 2.54 LINK OD1 ASP A 101 TB TB A 201 1555 1555 2.53 LINK OD2 ASP A 101 TB TB A 201 1555 1555 2.29 LINK TB TB A 201 N1 ZHT A 202 1555 1555 2.77 LINK TB TB A 201 O3 ZHT A 202 1555 1555 2.38 LINK TB TB A 201 O1 ZHT A 202 1555 1555 2.39 LINK TB TB A 201 N5 ZHT A 202 1555 1555 2.27 LINK TB TB A 201 N2 ZHT A 202 1555 1555 2.84 LINK TB TB A 201 N4 ZHT A 202 1555 1555 2.74 LINK TB TB A 201 N3 ZHT A 202 1555 1555 3.31 LINK NA NA A 209 O HOH A 373 1555 1555 2.40 LINK NA NA A 209 O HOH A 384 1555 1555 2.40 CRYST1 77.521 77.521 37.793 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012900 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012900 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026460 0.00000