HEADER VIRUS 30-JUN-23 8PNF TITLE HRV B14 VIRION PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 SYNONYM: P1D,VIRION PROTEIN 1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: 2; COMPND 9 SYNONYM: P1B,VIRION PROTEIN 2; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: CAPSID PROTEIN VP3; COMPND 13 CHAIN: 3; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: CAPSID PROTEIN VP4; COMPND 17 CHAIN: 4; COMPND 18 SYNONYM: P1A,VIRION PROTEIN 4; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: RNA (5'-R(P*AP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'); COMPND 22 CHAIN: A; COMPND 23 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 3 ORGANISM_TAXID: 12131; SOURCE 4 EXPRESSION_SYSTEM: RHINOVIRUS B14; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 12131; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 8 ORGANISM_TAXID: 12131; SOURCE 9 EXPRESSION_SYSTEM: RHINOVIRUS B14; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 12131; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 13 ORGANISM_TAXID: 12131; SOURCE 14 EXPRESSION_SYSTEM: RHINOVIRUS B14; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 12131; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 18 ORGANISM_TAXID: 12131; SOURCE 19 EXPRESSION_SYSTEM: RHINOVIRUS B14; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 12131; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: RHINOVIRUS B14; SOURCE 23 ORGANISM_TAXID: 12131; SOURCE 24 EXPRESSION_SYSTEM: RHINOVIRUS B14; SOURCE 25 EXPRESSION_SYSTEM_TAXID: 12131 KEYWDS CRYO-EM, HRV B14, DSRNA VIRUS, CAPSID, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR D.GIL-CANTERO,C.P.MATA,M.G.MATEU,J.R.CASTON REVDAT 1 20-NOV-24 8PNF 0 JRNL AUTH D.GIL-CANTERO,C.P.MATA,L.VALIENTE,A.RODRIGUEZ-HUETE, JRNL AUTH 2 A.VALBUENA,R.TWAROCK,P.G.STOCKLEY,M.G.MATEU,J.R.CASTON JRNL TITL CRYO-EM OF HUMAN RHINOVIRUS REVEALS CAPSID-RNA DUPLEX JRNL TITL 2 INTERACTIONS THAT PROVIDE INSIGHTS INTO VIRUS ASSEMBLY AND JRNL TITL 3 GENOME UNCOATING JRNL REF COMMUN BIOL 2024 JRNL REFN ESSN 2399-3642 JRNL DOI 10.1038/S42003-024-07213-2 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1NCQ REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.900 REMARK 3 NUMBER OF PARTICLES : 313305 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8PNF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292131150. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : RHINOVIRUS B14 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS TALOS REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3200.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : OTHER REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : OTHER REMARK 245 NOMINAL MAGNIFICATION : 73000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 300-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 300-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 4, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.809023 0.309002 0.32958 REMARK 350 BIOMT2 2 0.809012 -0.309017 0.500009 0.52178 REMARK 350 BIOMT3 2 -0.309031 0.499991 0.809017 -0.19930 REMARK 350 BIOMT1 3 -0.500012 -0.809009 0.309019 0.32960 REMARK 350 BIOMT2 3 -0.809009 0.309022 -0.500010 -0.53716 REMARK 350 BIOMT3 3 0.309019 -0.500010 -0.809010 -1.93957 REMARK 350 BIOMT1 4 -0.809017 0.309030 0.499992 0.54354 REMARK 350 BIOMT2 4 -0.309004 0.500000 -0.809022 -0.86794 REMARK 350 BIOMT3 4 -0.500008 -0.809012 -0.309017 -1.40435 REMARK 350 BIOMT1 5 0.000015 1.000000 -0.000002 0.01126 REMARK 350 BIOMT2 5 0.000013 -0.000002 -1.000000 -1.07713 REMARK 350 BIOMT3 5 -1.000000 0.000015 -0.000013 -1.06589 REMARK 350 BIOMT1 6 0.809029 0.309004 -0.499988 -0.53165 REMARK 350 BIOMT2 6 -0.309010 -0.500000 -0.809020 -0.87563 REMARK 350 BIOMT3 6 -0.499984 0.809022 -0.309029 -1.39192 REMARK 350 BIOMT1 7 0.499996 -0.809025 -0.309003 -0.33489 REMARK 350 BIOMT2 7 -0.809013 -0.309013 -0.500009 -0.54191 REMARK 350 BIOMT3 7 0.309034 0.499989 -0.809017 -1.93189 REMARK 350 BIOMT1 8 0.309039 0.500001 -0.809008 -0.85888 REMARK 350 BIOMT2 8 0.500001 -0.809019 -0.309009 -0.34616 REMARK 350 BIOMT3 8 -0.809008 -0.309009 -0.500020 -1.60367 REMARK 350 BIOMT1 9 0.309035 -0.500006 -0.809006 -0.86656 REMARK 350 BIOMT2 9 -0.500006 -0.809015 0.309013 0.31834 REMARK 350 BIOMT3 9 -0.809006 0.309013 -0.500020 -1.59892 REMARK 350 BIOMT1 10 -0.499997 -0.809021 -0.309012 -0.33135 REMARK 350 BIOMT2 10 -0.809021 0.309021 0.499991 0.53228 REMARK 350 BIOMT3 10 -0.309012 0.499991 -0.809024 -1.92969 REMARK 350 BIOMT1 11 -1.000000 0.000006 0.000000 0.00713 REMARK 350 BIOMT2 11 0.000006 1.000000 0.000001 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000001 -1.000000 -2.13887 REMARK 350 BIOMT1 12 0.499993 -0.809024 0.309011 0.32603 REMARK 350 BIOMT2 12 0.809022 0.309017 -0.499991 -0.54291 REMARK 350 BIOMT3 12 0.309015 0.499989 0.809024 -0.20150 REMARK 350 BIOMT1 13 -0.499988 0.809026 -0.309014 -0.31890 REMARK 350 BIOMT2 13 0.809025 0.309013 -0.499989 -0.54291 REMARK 350 BIOMT3 13 -0.309014 -0.499988 -0.809025 -1.93738 REMARK 350 BIOMT1 14 -0.500000 -0.809010 -0.309035 -0.33137 REMARK 350 BIOMT2 14 0.809023 -0.309016 -0.499990 -0.54766 REMARK 350 BIOMT3 14 0.309000 -0.500012 0.809016 -0.20919 REMARK 350 BIOMT1 15 -1.000000 0.000000 -0.000024 0.00710 REMARK 350 BIOMT2 15 0.000000 -1.000000 -0.000001 -0.01538 REMARK 350 BIOMT3 15 -0.000024 -0.000001 1.000000 0.00000 REMARK 350 BIOMT1 16 -0.500000 0.809011 -0.309031 -0.31892 REMARK 350 BIOMT2 16 -0.809023 -0.309018 0.499990 0.52753 REMARK 350 BIOMT3 16 0.309002 0.500009 0.809018 -0.20150 REMARK 350 BIOMT1 17 0.309017 0.499998 -0.809018 -0.85889 REMARK 350 BIOMT2 17 -0.500003 0.809016 0.309013 0.33079 REMARK 350 BIOMT3 17 0.809015 0.309021 0.500000 -0.53522 REMARK 350 BIOMT1 18 0.309017 -0.499995 -0.809020 -0.86658 REMARK 350 BIOMT2 18 0.500005 0.809017 -0.309009 -0.33371 REMARK 350 BIOMT3 18 0.809014 -0.309025 0.500000 -0.53997 REMARK 350 BIOMT1 19 0.000009 -0.000012 -1.000000 -1.06587 REMARK 350 BIOMT2 19 -1.000000 0.000002 -0.000009 -0.00414 REMARK 350 BIOMT3 19 0.000002 1.000000 -0.000012 -1.06176 REMARK 350 BIOMT1 20 -0.309019 -0.500001 -0.809016 -0.86437 REMARK 350 BIOMT2 20 -0.499994 0.809019 -0.309021 -0.33016 REMARK 350 BIOMT3 20 0.809020 0.309010 -0.500000 -1.60466 REMARK 350 BIOMT1 21 -0.809017 -0.309003 -0.500009 -0.53066 REMARK 350 BIOMT2 21 0.309030 0.500001 -0.809011 -0.87013 REMARK 350 BIOMT3 21 0.499992 -0.809022 -0.309018 -1.40791 REMARK 350 BIOMT1 22 -0.809003 0.309028 -0.500015 -0.52591 REMARK 350 BIOMT2 22 0.309028 -0.500001 -0.809013 -0.87783 REMARK 350 BIOMT3 22 -0.500016 -0.809012 0.309004 -0.74341 REMARK 350 BIOMT1 23 -0.309037 -0.500006 0.809006 0.86601 REMARK 350 BIOMT2 23 0.500002 -0.809017 -0.309014 -0.34617 REMARK 350 BIOMT3 23 0.809008 0.309008 0.500020 -0.53520 REMARK 350 BIOMT1 24 -0.308997 0.499995 -0.809028 -0.85669 REMARK 350 BIOMT2 24 -0.499997 -0.809017 -0.309022 -0.34260 REMARK 350 BIOMT3 24 -0.809027 0.309024 0.499980 -0.52948 REMARK 350 BIOMT1 25 0.809005 0.309023 0.500016 0.53779 REMARK 350 BIOMT2 25 -0.309031 -0.500000 0.809012 0.85475 REMARK 350 BIOMT3 25 0.500012 -0.809015 -0.309005 -1.40790 REMARK 350 BIOMT1 26 0.809015 -0.309008 0.500008 0.53303 REMARK 350 BIOMT2 26 -0.309027 0.500002 0.809012 0.86244 REMARK 350 BIOMT3 26 -0.499997 -0.809019 0.309017 -0.74340 REMARK 350 BIOMT1 27 0.309017 -0.500003 0.809015 0.86381 REMARK 350 BIOMT2 27 0.499998 0.809016 0.309021 0.32723 REMARK 350 BIOMT3 27 -0.809018 0.309013 0.500000 -0.52946 REMARK 350 BIOMT1 28 -0.000009 -0.000013 1.000000 1.07300 REMARK 350 BIOMT2 28 1.000000 -0.000003 0.000009 -0.01124 REMARK 350 BIOMT3 28 0.000003 1.000000 0.000013 -1.06173 REMARK 350 BIOMT1 29 0.308999 0.499993 0.809028 0.87151 REMARK 350 BIOMT2 29 0.499993 -0.809020 0.309021 0.31478 REMARK 350 BIOMT3 29 0.809028 0.309021 -0.499979 -1.60464 REMARK 350 BIOMT1 30 -0.309015 0.499999 0.809019 0.87370 REMARK 350 BIOMT2 30 0.500007 0.809014 -0.309012 -0.33372 REMARK 350 BIOMT3 30 -0.809013 0.309026 -0.500000 -1.59890 REMARK 350 BIOMT1 31 0.500005 0.809009 0.309032 0.33850 REMARK 350 BIOMT2 31 0.809021 -0.309022 -0.499991 -0.54766 REMARK 350 BIOMT3 31 -0.308999 0.500011 -0.809017 -1.92968 REMARK 350 BIOMT1 32 1.000000 -0.000006 0.000024 0.00003 REMARK 350 BIOMT2 32 -0.000006 -1.000000 0.000000 -0.01538 REMARK 350 BIOMT3 32 0.000024 0.000000 -1.000000 -2.13887 REMARK 350 BIOMT1 33 0.499996 -0.809013 0.309034 0.32606 REMARK 350 BIOMT2 33 -0.809025 -0.309013 0.499989 0.52753 REMARK 350 BIOMT3 33 -0.309003 -0.500009 -0.809017 -1.93738 REMARK 350 BIOMT1 34 -0.309037 0.500002 0.809008 0.87369 REMARK 350 BIOMT2 34 -0.500005 -0.809017 0.309008 0.31834 REMARK 350 BIOMT3 34 0.809006 -0.309014 0.500020 -0.53995 REMARK 350 BIOMT1 35 -0.309019 -0.499994 0.809020 0.86602 REMARK 350 BIOMT2 35 -0.500001 0.809019 0.309009 0.33078 REMARK 350 BIOMT3 35 -0.809016 -0.309021 -0.500000 -1.60365 REMARK 350 BIOMT1 36 -0.500000 0.809023 0.309000 0.34202 REMARK 350 BIOMT2 36 -0.809010 -0.309017 -0.500011 -0.54191 REMARK 350 BIOMT3 36 -0.309034 -0.499990 0.809016 -0.20698 REMARK 350 BIOMT1 37 0.500007 0.809011 -0.309022 -0.32248 REMARK 350 BIOMT2 37 -0.809012 0.309017 -0.500009 -0.53716 REMARK 350 BIOMT3 37 -0.309020 0.500010 0.809010 -0.19931 REMARK 350 BIOMT1 38 0.809015 -0.309028 -0.499996 -0.53641 REMARK 350 BIOMT2 38 -0.309008 0.500002 -0.809019 -0.86794 REMARK 350 BIOMT3 38 0.500008 0.809012 0.309017 -0.73452 REMARK 350 BIOMT1 39 -0.000015 -1.000000 -0.000003 -0.00413 REMARK 350 BIOMT2 39 0.000012 0.000003 -1.000000 -1.07713 REMARK 350 BIOMT3 39 1.000000 -0.000015 0.000012 -1.07299 REMARK 350 BIOMT1 40 -0.809031 -0.309006 0.499984 0.53877 REMARK 350 BIOMT2 40 -0.309007 -0.499998 -0.809022 -0.87564 REMARK 350 BIOMT3 40 0.499984 -0.809022 0.309029 -0.74696 REMARK 350 BIOMT1 41 0.809005 -0.309031 0.500011 0.53304 REMARK 350 BIOMT2 41 0.309023 -0.500000 -0.809015 -0.87782 REMARK 350 BIOMT3 41 0.500016 0.809012 -0.309005 -1.39546 REMARK 350 BIOMT1 42 0.308995 -0.499999 0.809026 0.86382 REMARK 350 BIOMT2 42 -0.499999 -0.809014 -0.309025 -0.34261 REMARK 350 BIOMT3 42 0.809026 -0.309025 -0.499981 -1.60939 REMARK 350 BIOMT1 43 -0.000015 0.000012 1.000000 1.07300 REMARK 350 BIOMT2 43 -1.000000 0.000003 -0.000015 -0.00414 REMARK 350 BIOMT3 43 -0.000003 -1.000000 0.000012 -1.07711 REMARK 350 BIOMT1 44 0.309017 0.500005 0.809014 0.87149 REMARK 350 BIOMT2 44 -0.499995 0.809017 -0.309026 -0.33017 REMARK 350 BIOMT3 44 -0.809020 -0.309008 0.500000 -0.53421 REMARK 350 BIOMT1 45 0.499992 0.809022 0.309015 0.33848 REMARK 350 BIOMT2 45 -0.809024 0.309017 0.499989 0.53228 REMARK 350 BIOMT3 45 0.309011 -0.499991 0.809025 -0.20918 REMARK 350 BIOMT1 46 0.809019 0.309006 0.500004 0.53778 REMARK 350 BIOMT2 46 0.309027 0.499998 -0.809014 -0.87014 REMARK 350 BIOMT3 46 -0.499991 0.809022 0.309017 -0.73096 REMARK 350 BIOMT1 47 -0.309014 0.500007 -0.809014 -0.85668 REMARK 350 BIOMT2 47 0.499999 0.809014 0.309026 0.32723 REMARK 350 BIOMT3 47 0.809019 -0.309012 -0.500000 -1.60941 REMARK 350 BIOMT1 48 0.000015 0.000013 -1.000000 -1.06587 REMARK 350 BIOMT2 48 1.000000 -0.000002 0.000015 -0.01124 REMARK 350 BIOMT3 48 -0.000002 -1.000000 -0.000013 -1.07714 REMARK 350 BIOMT1 49 -0.308997 -0.499997 -0.809026 -0.86438 REMARK 350 BIOMT2 49 0.499995 -0.809017 0.309025 0.31479 REMARK 350 BIOMT3 49 -0.809028 -0.309021 0.499980 -0.53423 REMARK 350 BIOMT1 50 -0.809006 -0.309026 -0.500012 -0.53066 REMARK 350 BIOMT2 50 -0.309026 -0.500000 0.809014 0.85476 REMARK 350 BIOMT3 50 -0.500012 0.809014 0.309006 -0.73097 REMARK 350 BIOMT1 51 -0.809017 0.309011 -0.500004 -0.52589 REMARK 350 BIOMT2 51 -0.309024 0.499999 0.809015 0.86244 REMARK 350 BIOMT3 51 0.499996 0.809020 -0.309016 -1.39547 REMARK 350 BIOMT1 52 0.000009 -1.000000 0.000002 -0.00413 REMARK 350 BIOMT2 52 -0.000012 0.000002 1.000000 1.06174 REMARK 350 BIOMT3 52 -1.000000 -0.000009 -0.000012 -1.06588 REMARK 350 BIOMT1 53 -0.809017 -0.309024 0.499996 0.53878 REMARK 350 BIOMT2 53 0.309010 0.499999 0.809020 0.86024 REMARK 350 BIOMT3 53 -0.500004 0.809015 -0.309016 -1.39190 REMARK 350 BIOMT1 54 -0.500003 0.809013 0.309023 0.34205 REMARK 350 BIOMT2 54 0.809013 0.309012 0.500010 0.52653 REMARK 350 BIOMT3 54 0.309023 0.500010 -0.809009 -1.93188 REMARK 350 BIOMT1 55 0.500004 0.809021 -0.308999 -0.32246 REMARK 350 BIOMT2 55 0.809008 -0.309021 0.500011 0.52178 REMARK 350 BIOMT3 55 0.309033 -0.499990 -0.809017 -1.93957 REMARK 350 BIOMT1 56 -0.809027 0.309008 0.499989 0.54353 REMARK 350 BIOMT2 56 0.309008 -0.500003 0.809019 0.85256 REMARK 350 BIOMT3 56 0.499989 0.809019 0.309030 -0.73451 REMARK 350 BIOMT1 57 0.809029 -0.309010 -0.499984 -0.53640 REMARK 350 BIOMT2 57 0.309004 -0.500000 0.809022 0.85256 REMARK 350 BIOMT3 57 -0.499988 -0.809020 -0.309029 -1.40436 REMARK 350 BIOMT1 58 -0.000009 1.000000 0.000003 0.01125 REMARK 350 BIOMT2 58 -0.000013 -0.000003 1.000000 1.06174 REMARK 350 BIOMT3 58 1.000000 0.000009 0.000013 -1.07299 REMARK 350 BIOMT1 59 0.809019 0.309026 -0.499991 -0.53165 REMARK 350 BIOMT2 59 0.309006 0.499998 0.809022 0.86025 REMARK 350 BIOMT3 59 0.500004 -0.809015 0.309017 -0.74697 REMARK 350 BIOMT1 60 0.500007 -0.809011 -0.309020 -0.33492 REMARK 350 BIOMT2 60 0.809011 0.309017 0.500010 0.52653 REMARK 350 BIOMT3 60 -0.309022 -0.500009 0.809009 -0.20699 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CE LYS 4 58 O2' A A 1 1.65 REMARK 500 NZ LYS 4 58 O2' A A 1 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U A 2 O5' - P - OP1 ANGL. DEV. = -6.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR 1 17 75.89 59.84 REMARK 500 HIS 1 59 39.42 -97.55 REMARK 500 PRO 1 189 -177.85 -69.14 REMARK 500 ASN 1 219 55.67 -99.14 REMARK 500 ILE 1 254 80.01 55.55 REMARK 500 LEU 2 86 51.27 -96.56 REMARK 500 ARG 2 255 -155.83 -151.43 REMARK 500 SER 2 256 41.14 -101.96 REMARK 500 LYS 2 257 81.05 59.76 REMARK 500 THR 3 58 51.70 -90.69 REMARK 500 LEU 3 219 115.20 -160.26 REMARK 500 LEU 3 221 75.53 60.59 REMARK 500 THR 4 28 48.87 -91.13 REMARK 500 PRO 4 56 46.60 -89.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-17781 RELATED DB: EMDB REMARK 900 HRV B14 VIRIONS CAPSID PROTEINS AND RNA DBREF 8PNF 1 7 289 UNP P03303 POLG_HRV14 574 856 DBREF 8PNF 2 7 262 UNP P03303 POLG_HRV14 76 331 DBREF 8PNF 3 1 236 UNP P03303 POLG_HRV14 332 567 DBREF 8PNF 4 23 69 UNP P03303 POLG_HRV14 23 69 DBREF 8PNF A 1 14 PDB 8PNF 8PNF 1 14 SEQADV 8PNF LEU 2 170 UNP P03303 ILE 239 CONFLICT SEQADV 8PNF TYR 4 29 UNP P03303 VAL 29 CONFLICT SEQRES 1 1 283 GLU GLU VAL ILE VAL GLU LYS THR LYS GLN THR VAL ALA SEQRES 2 1 283 SER ILE SER SER GLY PRO LYS HIS THR GLN LYS VAL PRO SEQRES 3 1 283 ILE LEU THR ALA ASN GLU THR GLY ALA THR MET PRO VAL SEQRES 4 1 283 LEU PRO SER ASP SER ILE GLU THR ARG THR THR TYR MET SEQRES 5 1 283 HIS PHE ASN GLY SER GLU THR ASP VAL GLU CYS PHE LEU SEQRES 6 1 283 GLY ARG ALA ALA CYS VAL HIS VAL THR GLU ILE GLN ASN SEQRES 7 1 283 LYS ASP ALA THR GLY ILE ASP ASN HIS ARG GLU ALA LYS SEQRES 8 1 283 LEU PHE ASN ASP TRP LYS ILE ASN LEU SER SER LEU VAL SEQRES 9 1 283 GLN LEU ARG LYS LYS LEU GLU LEU PHE THR TYR VAL ARG SEQRES 10 1 283 PHE ASP SER GLU TYR THR ILE LEU ALA THR ALA SER GLN SEQRES 11 1 283 PRO ASP SER ALA ASN TYR SER SER ASN LEU VAL VAL GLN SEQRES 12 1 283 ALA MET TYR VAL PRO PRO GLY ALA PRO ASN PRO LYS GLU SEQRES 13 1 283 TRP ASP ASP TYR THR TRP GLN SER ALA SER ASN PRO SER SEQRES 14 1 283 VAL PHE PHE LYS VAL GLY ASP THR SER ARG PHE SER VAL SEQRES 15 1 283 PRO TYR VAL GLY LEU ALA SER ALA TYR ASN CYS PHE TYR SEQRES 16 1 283 ASP GLY TYR SER HIS ASP ASP ALA GLU THR GLN TYR GLY SEQRES 17 1 283 ILE THR VAL LEU ASN HIS MET GLY SER MET ALA PHE ARG SEQRES 18 1 283 ILE VAL ASN GLU HIS ASP GLU HIS LYS THR LEU VAL LYS SEQRES 19 1 283 ILE ARG VAL TYR HIS ARG ALA LYS HIS VAL GLU ALA TRP SEQRES 20 1 283 ILE PRO ARG ALA PRO ARG ALA LEU PRO TYR THR SER ILE SEQRES 21 1 283 GLY ARG THR ASN TYR PRO LYS ASN THR GLU PRO VAL ILE SEQRES 22 1 283 LYS LYS ARG LYS GLY ASP ILE LYS SER TYR SEQRES 1 2 256 CYS GLY TYR SER ASP ARG VAL GLN GLN ILE THR LEU GLY SEQRES 2 2 256 ASN SER THR ILE THR THR GLN GLU ALA ALA ASN ALA VAL SEQRES 3 2 256 VAL CYS TYR ALA GLU TRP PRO GLU TYR LEU PRO ASP VAL SEQRES 4 2 256 ASP ALA SER ASP VAL ASN LYS THR SER LYS PRO ASP THR SEQRES 5 2 256 SER VAL CYS ARG PHE TYR THR LEU ASP SER LYS THR TRP SEQRES 6 2 256 THR THR GLY SER LYS GLY TRP CYS TRP LYS LEU PRO ASP SEQRES 7 2 256 ALA LEU LYS ASP MET GLY VAL PHE GLY GLN ASN MET PHE SEQRES 8 2 256 PHE HIS SER LEU GLY ARG SER GLY TYR THR VAL HIS VAL SEQRES 9 2 256 GLN CYS ASN ALA THR LYS PHE HIS SER GLY CYS LEU LEU SEQRES 10 2 256 VAL VAL VAL ILE PRO GLU HIS GLN LEU ALA SER HIS GLU SEQRES 11 2 256 GLY GLY ASN VAL SER VAL LYS TYR THR PHE THR HIS PRO SEQRES 12 2 256 GLY GLU ARG GLY ILE ASP LEU SER SER ALA ASN GLU VAL SEQRES 13 2 256 GLY GLY PRO VAL LYS ASP VAL LEU TYR ASN MET ASN GLY SEQRES 14 2 256 THR LEU LEU GLY ASN LEU LEU ILE PHE PRO HIS GLN PHE SEQRES 15 2 256 ILE ASN LEU ARG THR ASN ASN THR ALA THR ILE VAL ILE SEQRES 16 2 256 PRO TYR ILE ASN SER VAL PRO ILE ASP SER MET THR ARG SEQRES 17 2 256 HIS ASN ASN VAL SER LEU MET VAL ILE PRO ILE ALA PRO SEQRES 18 2 256 LEU THR VAL PRO THR GLY ALA THR PRO SER LEU PRO ILE SEQRES 19 2 256 THR VAL THR ILE ALA PRO MET CYS THR GLU PHE SER GLY SEQRES 20 2 256 ILE ARG SER LYS SER ILE VAL PRO GLN SEQRES 1 3 236 GLY LEU PRO THR THR THR LEU PRO GLY SER GLY GLN PHE SEQRES 2 3 236 LEU THR THR ASP ASP ARG GLN SER PRO SER ALA LEU PRO SEQRES 3 3 236 ASN TYR GLU PRO THR PRO ARG ILE HIS ILE PRO GLY LYS SEQRES 4 3 236 VAL HIS ASN LEU LEU GLU ILE ILE GLN VAL ASP THR LEU SEQRES 5 3 236 ILE PRO MET ASN ASN THR HIS THR LYS ASP GLU VAL ASN SEQRES 6 3 236 SER TYR LEU ILE PRO LEU ASN ALA ASN ARG GLN ASN GLU SEQRES 7 3 236 GLN VAL PHE GLY THR ASN LEU PHE ILE GLY ASP GLY VAL SEQRES 8 3 236 PHE LYS THR THR LEU LEU GLY GLU ILE VAL GLN TYR TYR SEQRES 9 3 236 THR HIS TRP SER GLY SER LEU ARG PHE SER LEU MET TYR SEQRES 10 3 236 THR GLY PRO ALA LEU SER SER ALA LYS LEU ILE LEU ALA SEQRES 11 3 236 TYR THR PRO PRO GLY ALA ARG GLY PRO GLN ASP ARG ARG SEQRES 12 3 236 GLU ALA MET LEU GLY THR HIS VAL VAL TRP ASP ILE GLY SEQRES 13 3 236 LEU GLN SER THR ILE VAL MET THR ILE PRO TRP THR SER SEQRES 14 3 236 GLY VAL GLN PHE ARG TYR THR ASP PRO ASP THR TYR THR SEQRES 15 3 236 SER ALA GLY PHE LEU SER CYS TRP TYR GLN THR SER LEU SEQRES 16 3 236 ILE LEU PRO PRO GLU THR THR GLY GLN VAL TYR LEU LEU SEQRES 17 3 236 SER PHE ILE SER ALA CYS PRO ASP PHE LYS LEU ARG LEU SEQRES 18 3 236 MET LYS ASP THR GLN THR ILE SER GLN THR VAL ALA LEU SEQRES 19 3 236 THR GLU SEQRES 1 4 47 SER ASN GLN THR PHE THR TYR ILE ASN TYR TYR LYS ASP SEQRES 2 4 47 ALA ALA SER THR SER SER ALA GLY GLN SER LEU SER MET SEQRES 3 4 47 ASP PRO SER LYS PHE THR GLU PRO VAL LYS ASP LEU MET SEQRES 4 4 47 LEU LYS GLY ALA PRO ALA LEU ASN SEQRES 1 A 14 A U U U U U U U U U U U U SEQRES 2 A 14 U HELIX 1 AA1 ALA 1 36 GLY 1 40 5 5 HELIX 2 AA2 LEU 1 46 SER 1 50 5 5 HELIX 3 AA3 ASP 1 66 LEU 1 71 1 6 HELIX 4 AA4 LEU 1 109 GLU 1 117 1 9 HELIX 5 AA5 ASP 1 165 SER 1 170 5 6 HELIX 6 AA6 TYR 2 35 GLU 2 37 5 3 HELIX 7 AA7 PRO 2 56 CYS 2 61 1 6 HELIX 8 AA8 MET 2 89 PHE 2 98 1 10 HELIX 9 AA9 LYS 2 143 HIS 2 148 1 6 HELIX 10 AB1 PRO 2 149 GLY 2 153 5 5 HELIX 11 AB2 LEU 2 177 PHE 2 184 5 8 HELIX 12 AB3 VAL 3 64 SER 3 66 5 3 HELIX 13 AB4 ASP 3 89 LYS 3 93 5 5 HELIX 14 AB5 THR 3 95 VAL 3 101 1 7 HELIX 15 AB6 ASP 3 141 LEU 3 147 1 7 HELIX 16 AB7 PRO 4 50 GLU 4 55 1 6 SHEET 1 AA1 2 VAL 1 18 SER 1 20 0 SHEET 2 AA1 2 THR 1 56 TYR 1 57 -1 O THR 1 56 N ALA 1 19 SHEET 1 AA2 5 LEU 1 34 THR 1 35 0 SHEET 2 AA2 5 THR 3 160 ILE 3 165 -1 O THR 3 160 N THR 1 35 SHEET 3 AA2 5 LEU 3 111 TYR 3 117 -1 N PHE 3 113 O MET 3 163 SHEET 4 AA2 5 VAL 3 205 ALA 3 213 -1 O SER 3 212 N ARG 3 112 SHEET 5 AA2 5 THR 3 51 LEU 3 52 -1 N THR 3 51 O ILE 3 211 SHEET 1 AA3 5 LEU 1 34 THR 1 35 0 SHEET 2 AA3 5 THR 3 160 ILE 3 165 -1 O THR 3 160 N THR 1 35 SHEET 3 AA3 5 LEU 3 111 TYR 3 117 -1 N PHE 3 113 O MET 3 163 SHEET 4 AA3 5 VAL 3 205 ALA 3 213 -1 O SER 3 212 N ARG 3 112 SHEET 5 AA3 5 LEU 3 68 LEU 3 71 -1 N ILE 3 69 O LEU 3 207 SHEET 1 AA4 4 ALA 1 75 ASN 1 84 0 SHEET 2 AA4 4 THR 1 237 PRO 1 255 -1 O VAL 1 239 N ILE 1 82 SHEET 3 AA4 4 PHE 1 119 SER 1 135 -1 N THR 1 129 O TYR 1 244 SHEET 4 AA4 4 TYR 1 197 ASN 1 198 -1 O TYR 1 197 N VAL 1 122 SHEET 1 AA5 4 THR 1 183 VAL 1 188 0 SHEET 2 AA5 4 PHE 1 119 SER 1 135 -1 N SER 1 126 O VAL 1 188 SHEET 3 AA5 4 THR 1 237 PRO 1 255 -1 O TYR 1 244 N THR 1 129 SHEET 4 AA5 4 LYS 3 39 VAL 3 40 -1 O VAL 3 40 N ALA 1 252 SHEET 1 AA6 4 PHE 1 99 LYS 1 103 0 SHEET 2 AA6 4 SER 1 223 ILE 1 228 -1 O PHE 1 226 N ASN 1 100 SHEET 3 AA6 4 VAL 1 147 VAL 1 153 -1 N VAL 1 153 O SER 1 223 SHEET 4 AA6 4 SER 1 175 LYS 1 179 -1 O PHE 1 178 N VAL 1 148 SHEET 1 AA7 2 GLN 2 14 LEU 2 18 0 SHEET 2 AA7 2 SER 2 21 THR 2 25 -1 O ILE 2 23 N ILE 2 16 SHEET 1 AA8 5 ALA 2 31 VAL 2 33 0 SHEET 2 AA8 5 THR 2 196 ILE 2 201 1 O VAL 2 200 N VAL 2 32 SHEET 3 AA8 5 HIS 2 99 GLN 2 111 -1 N TYR 2 106 O ILE 2 201 SHEET 4 AA8 5 LEU 2 238 ILE 2 254 -1 O THR 2 241 N GLN 2 111 SHEET 5 AA8 5 TYR 2 64 THR 2 65 -1 N TYR 2 64 O ILE 2 244 SHEET 1 AA9 5 ALA 2 31 VAL 2 33 0 SHEET 2 AA9 5 THR 2 196 ILE 2 201 1 O VAL 2 200 N VAL 2 32 SHEET 3 AA9 5 HIS 2 99 GLN 2 111 -1 N TYR 2 106 O ILE 2 201 SHEET 4 AA9 5 LEU 2 238 ILE 2 254 -1 O THR 2 241 N GLN 2 111 SHEET 5 AA9 5 LYS 2 69 TRP 2 71 -1 N TRP 2 71 O LEU 2 238 SHEET 1 AB1 5 ILE 2 154 ASP 2 155 0 SHEET 2 AB1 5 TRP 2 78 LEU 2 82 -1 N CYS 2 79 O ILE 2 154 SHEET 3 AB1 5 VAL 2 218 THR 2 229 -1 O LEU 2 220 N TRP 2 80 SHEET 4 AB1 5 SER 2 119 PRO 2 128 -1 N LEU 2 123 O ILE 2 223 SHEET 5 AB1 5 HIS 2 186 ASN 2 190 -1 O GLN 2 187 N VAL 2 124 SHEET 1 AB2 4 GLN 3 79 ASN 3 84 0 SHEET 2 AB2 4 PHE 3 186 ILE 3 196 -1 O CYS 3 189 N VAL 3 80 SHEET 3 AB2 4 SER 3 124 THR 3 132 -1 N SER 3 124 O ILE 3 196 SHEET 4 AB2 4 THR 3 149 ASP 3 154 -1 O TRP 3 153 N LEU 3 127 SHEET 1 AB3 3 ARG 3 174 TYR 3 175 0 SHEET 2 AB3 3 TYR 3 104 SER 3 108 -1 N TRP 3 107 O ARG 3 174 SHEET 3 AB3 3 LYS 3 218 MET 3 222 -1 O LYS 3 218 N SER 3 108 CISPEP 1 LEU 2 82 PRO 2 83 0 3.76 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000