HEADER PROTEIN BINDING 11-JUL-23 8PQP TITLE NUCLEOSIDE 2'DEOXYRIBOSYLTRANSFERASE FROM CHROOCOCCIDIOPSIS THERMALIS TITLE 2 PCC 7203 D62N MUTANT BOUND TO IMMH-FORODESINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROOCOCCIDIOPSIS THERMALIS PCC 7203; SOURCE 3 ORGANISM_TAXID: 251229; SOURCE 4 STRAIN: PCC 7203; SOURCE 5 ATCC: 27900; SOURCE 6 GENE: CHRO_1188; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 37762 KEYWDS COMPLEX, TRANSFERASE, IMMH-FORODESINE, MUTANT, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.TANG,C.J.HARDING,M.C.CZEKSTER REVDAT 3 23-OCT-24 8PQP 1 REMARK REVDAT 2 20-MAR-24 8PQP 1 JRNL REVDAT 1 21-FEB-24 8PQP 0 JRNL AUTH P.TANG,C.J.HARDING,A.L.DICKSON,R.G.DA SILVA,D.J.HARRISON, JRNL AUTH 2 C.M.CZEKSTER JRNL TITL SNAPSHOTS OF THE REACTION COORDINATE OF A THERMOPHILIC JRNL TITL 2 2'-DEOXYRIBONUCLEOSIDE/RIBONUCLEOSIDE TRANSFERASE. JRNL REF ACS CATALYSIS V. 14 3090 2024 JRNL REFN ESSN 2155-5435 JRNL PMID 38449528 JRNL DOI 10.1021/ACSCATAL.3C06260 REMARK 2 REMARK 2 RESOLUTION. 1.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2-4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 34134 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1665 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 3.9121 - 3.1053 1.00 2804 151 0.1869 0.2093 REMARK 3 2 3.1053 - 2.7128 1.00 2760 150 0.2179 0.2483 REMARK 3 3 2.7128 - 2.4648 1.00 2767 133 0.2282 0.2810 REMARK 3 4 2.4648 - 2.2881 1.00 2757 149 0.2278 0.2653 REMARK 3 5 2.2881 - 2.1532 1.00 2729 152 0.2140 0.2508 REMARK 3 6 2.1532 - 2.0454 1.00 2741 127 0.2193 0.2615 REMARK 3 7 2.0454 - 1.9563 1.00 2750 123 0.2202 0.2788 REMARK 3 8 1.9563 - 1.8810 1.00 2755 122 0.2360 0.2584 REMARK 3 9 1.8810 - 1.8161 1.00 2732 143 0.3204 0.3403 REMARK 3 10 1.8161 - 1.7593 0.97 2622 135 0.3846 0.4181 REMARK 3 11 1.7593 - 1.7090 0.79 2142 141 0.4250 0.4342 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2570 REMARK 3 ANGLE : 0.838 3497 REMARK 3 CHIRALITY : 0.055 372 REMARK 3 PLANARITY : 0.006 454 REMARK 3 DIHEDRAL : 6.247 1527 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6031 -22.8830 -3.6816 REMARK 3 T TENSOR REMARK 3 T11: 0.4566 T22: 0.3888 REMARK 3 T33: 0.5494 T12: 0.0268 REMARK 3 T13: 0.1107 T23: 0.0744 REMARK 3 L TENSOR REMARK 3 L11: 2.1689 L22: 2.3881 REMARK 3 L33: 2.3145 L12: 0.5251 REMARK 3 L13: 0.6855 L23: 0.3212 REMARK 3 S TENSOR REMARK 3 S11: -0.0432 S12: 0.0362 S13: -0.0476 REMARK 3 S21: -0.1142 S22: -0.1143 S23: -0.0639 REMARK 3 S31: 0.3422 S32: 0.1527 S33: 0.1428 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3509 -48.2633 8.0511 REMARK 3 T TENSOR REMARK 3 T11: 0.7891 T22: 0.5645 REMARK 3 T33: 0.5623 T12: -0.2194 REMARK 3 T13: -0.1070 T23: 0.1722 REMARK 3 L TENSOR REMARK 3 L11: 2.6492 L22: 1.8470 REMARK 3 L33: 0.6415 L12: 0.2649 REMARK 3 L13: 0.0747 L23: 0.0284 REMARK 3 S TENSOR REMARK 3 S11: 0.5125 S12: -0.6550 S13: -0.8330 REMARK 3 S21: 0.0532 S22: -0.2966 S23: -0.5086 REMARK 3 S31: 0.6092 S32: -0.1530 S33: -0.2078 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 44 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8854 -46.0420 -7.8511 REMARK 3 T TENSOR REMARK 3 T11: 1.2962 T22: 1.1835 REMARK 3 T33: 0.9532 T12: 0.0487 REMARK 3 T13: -0.2125 T23: -0.2716 REMARK 3 L TENSOR REMARK 3 L11: 3.6126 L22: 3.9931 REMARK 3 L33: 0.8940 L12: -1.7622 REMARK 3 L13: 0.3472 L23: 1.2582 REMARK 3 S TENSOR REMARK 3 S11: 0.0778 S12: 1.2744 S13: -0.9158 REMARK 3 S21: 0.9046 S22: -0.2234 S23: -1.2483 REMARK 3 S31: 0.8865 S32: 0.2486 S33: -0.2344 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4960 -52.1944 -7.2762 REMARK 3 T TENSOR REMARK 3 T11: 1.1522 T22: 0.4160 REMARK 3 T33: 0.6533 T12: -0.0673 REMARK 3 T13: -0.1509 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 2.7843 L22: 5.6209 REMARK 3 L33: 8.1716 L12: -0.1259 REMARK 3 L13: -0.0618 L23: -2.6664 REMARK 3 S TENSOR REMARK 3 S11: 0.3445 S12: 0.0514 S13: -0.5922 REMARK 3 S21: -1.3052 S22: -0.1169 S23: -0.3575 REMARK 3 S31: 0.6625 S32: 0.1683 S33: -0.1930 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2167 -41.8722 13.1860 REMARK 3 T TENSOR REMARK 3 T11: 0.6997 T22: 0.7796 REMARK 3 T33: 0.3671 T12: -0.3367 REMARK 3 T13: -0.0660 T23: 0.1355 REMARK 3 L TENSOR REMARK 3 L11: 3.8895 L22: 2.6208 REMARK 3 L33: 2.2734 L12: 0.4618 REMARK 3 L13: 0.7292 L23: -0.5145 REMARK 3 S TENSOR REMARK 3 S11: 0.3323 S12: -1.0603 S13: -0.3185 REMARK 3 S21: 0.0285 S22: -0.1766 S23: 0.1215 REMARK 3 S31: 0.1311 S32: -0.3269 S33: -0.1899 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6506 -26.6462 10.7557 REMARK 3 T TENSOR REMARK 3 T11: 0.4830 T22: 0.4019 REMARK 3 T33: 0.4438 T12: -0.0288 REMARK 3 T13: 0.0093 T23: 0.0623 REMARK 3 L TENSOR REMARK 3 L11: 3.6168 L22: 5.0447 REMARK 3 L33: 3.6321 L12: 0.5579 REMARK 3 L13: 1.3222 L23: -0.4788 REMARK 3 S TENSOR REMARK 3 S11: 0.2174 S12: -0.3741 S13: -0.0665 REMARK 3 S21: 0.4272 S22: -0.3187 S23: -0.4344 REMARK 3 S31: 0.5166 S32: -0.0277 S33: 0.1142 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9237 -18.0845 18.1435 REMARK 3 T TENSOR REMARK 3 T11: 0.5909 T22: 0.7858 REMARK 3 T33: 0.6328 T12: 0.0515 REMARK 3 T13: -0.0474 T23: 0.0464 REMARK 3 L TENSOR REMARK 3 L11: 3.2470 L22: 3.7154 REMARK 3 L33: 8.3327 L12: -2.0581 REMARK 3 L13: -4.8872 L23: 1.5020 REMARK 3 S TENSOR REMARK 3 S11: -0.9482 S12: -1.7760 S13: -0.2671 REMARK 3 S21: 0.8024 S22: 0.4245 S23: 0.1036 REMARK 3 S31: 0.8949 S32: 0.2179 S33: 0.3832 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3334 -11.0236 14.4918 REMARK 3 T TENSOR REMARK 3 T11: 0.4895 T22: 0.5174 REMARK 3 T33: 0.5583 T12: -0.0318 REMARK 3 T13: -0.0692 T23: -0.0627 REMARK 3 L TENSOR REMARK 3 L11: 2.8144 L22: 5.9087 REMARK 3 L33: 4.4440 L12: 2.3281 REMARK 3 L13: -3.4581 L23: -2.1390 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: -0.7472 S13: 0.2997 REMARK 3 S21: 0.2520 S22: -0.1808 S23: -0.3938 REMARK 3 S31: -0.1623 S32: 0.1696 S33: 0.0242 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PQP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292129642. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AUTOPROC 1.0.5 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34700 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.709 REMARK 200 RESOLUTION RANGE LOW (A) : 49.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 16.70 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 1.09400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% V/V PEG SMEAR BROAD; 0.1 M SODIUM REMARK 280 PHOSPHATE PH 6.2; 0.2 M SODIUM CHLORIDE, PH 6.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.08267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.04133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 21.04133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 42.08267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 351 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 229 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 LYS B 2 CG CD CE NZ REMARK 470 ASP B 48 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 149 O HOH A 301 1.94 REMARK 500 O HOH A 348 O HOH B 220 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C ALA B 52 NH1 ARG B 114 4555 1.60 REMARK 500 CA ALA B 52 NH1 ARG B 114 4555 1.92 REMARK 500 O HOH A 342 O HOH A 342 6554 2.09 REMARK 500 O ALA B 52 NH1 ARG B 114 4555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN B 46 79.04 -106.96 REMARK 500 CYS B 109 86.98 -150.42 REMARK 500 REMARK 500 REMARK: NULL DBREF 8PQP A 1 155 UNP K9TVX3 K9TVX3_CHRTP 1 155 DBREF 8PQP B 1 155 UNP K9TVX3 K9TVX3_CHRTP 1 155 SEQADV 8PQP ASN A 62 UNP K9TVX3 ASP 62 ENGINEERED MUTATION SEQADV 8PQP ASN B 62 UNP K9TVX3 ASP 62 ENGINEERED MUTATION SEQRES 1 A 155 MET LYS ARG LYS ILE ILE TYR LEU ALA SER PRO TYR GLY SEQRES 2 A 155 PHE SER GLN GLN GLN LYS THR LEU LEU LEU PRO PRO ILE SEQRES 3 A 155 VAL ARG ALA LEU GLU ALA LEU GLY ILE GLU VAL TRP GLU SEQRES 4 A 155 PRO PHE ALA ARG ASN ASN GLN ILE ASP PHE SER GLN ALA SEQRES 5 A 155 ASP TRP ALA TYR ARG VAL ALA GLN ALA ASN LEU GLN ASP SEQRES 6 A 155 VAL LYS ASN CYS ASP GLY ILE PHE ALA VAL VAL ASN GLY SEQRES 7 A 155 THR PRO PRO ASP GLU GLY VAL MET VAL GLU LEU GLY MET SEQRES 8 A 155 ALA ILE ALA LEU ASN LYS ALA ILE PHE LEU PHE ARG ASP SEQRES 9 A 155 ASP PHE ARG ARG CYS SER ASP ASN GLU ARG TYR PRO LEU SEQRES 10 A 155 ASN LEU MET LEU PHE ALA GLY LEU PRO GLU ILE GLY TRP SEQRES 11 A 155 GLU ASN TYR TYR TYR THR SER VAL ASP GLU ILE GLN SER SEQRES 12 A 155 HIS ASP LYS ALA LEU TYR LYS TRP LEU THR GLY MET SEQRES 1 B 155 MET LYS ARG LYS ILE ILE TYR LEU ALA SER PRO TYR GLY SEQRES 2 B 155 PHE SER GLN GLN GLN LYS THR LEU LEU LEU PRO PRO ILE SEQRES 3 B 155 VAL ARG ALA LEU GLU ALA LEU GLY ILE GLU VAL TRP GLU SEQRES 4 B 155 PRO PHE ALA ARG ASN ASN GLN ILE ASP PHE SER GLN ALA SEQRES 5 B 155 ASP TRP ALA TYR ARG VAL ALA GLN ALA ASN LEU GLN ASP SEQRES 6 B 155 VAL LYS ASN CYS ASP GLY ILE PHE ALA VAL VAL ASN GLY SEQRES 7 B 155 THR PRO PRO ASP GLU GLY VAL MET VAL GLU LEU GLY MET SEQRES 8 B 155 ALA ILE ALA LEU ASN LYS ALA ILE PHE LEU PHE ARG ASP SEQRES 9 B 155 ASP PHE ARG ARG CYS SER ASP ASN GLU ARG TYR PRO LEU SEQRES 10 B 155 ASN LEU MET LEU PHE ALA GLY LEU PRO GLU ILE GLY TRP SEQRES 11 B 155 GLU ASN TYR TYR TYR THR SER VAL ASP GLU ILE GLN SER SEQRES 12 B 155 HIS ASP LYS ALA LEU TYR LYS TRP LEU THR GLY MET HET IMH A 201 19 HETNAM IMH 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D- HETNAM 2 IMH RIBITOL HETSYN IMH FORODESINE; IMMUCILLIN H FORMUL 3 IMH C11 H14 N4 O4 FORMUL 4 HOH *93(H2 O) HELIX 1 AA1 PRO A 11 PHE A 14 5 4 HELIX 2 AA2 SER A 15 LEU A 22 1 8 HELIX 3 AA3 LEU A 22 LEU A 33 1 12 HELIX 4 AA4 GLU A 39 ASN A 44 1 6 HELIX 5 AA5 ASN A 45 ILE A 47 5 3 HELIX 6 AA6 ASP A 53 CYS A 69 1 17 HELIX 7 AA7 ASP A 82 LEU A 95 1 14 HELIX 8 AA8 ASN A 118 ALA A 123 5 6 HELIX 9 AA9 GLY A 129 ASN A 132 5 4 HELIX 10 AB1 SER A 137 SER A 143 5 7 HELIX 11 AB2 LYS A 146 GLY A 154 1 9 HELIX 12 AB3 PRO B 11 PHE B 14 5 4 HELIX 13 AB4 SER B 15 LEU B 22 1 8 HELIX 14 AB5 LEU B 22 LEU B 33 1 12 HELIX 15 AB6 GLU B 39 ASN B 44 1 6 HELIX 16 AB7 TRP B 54 CYS B 69 1 16 HELIX 17 AB8 ASP B 82 LEU B 95 1 14 HELIX 18 AB9 ASN B 118 ALA B 123 5 6 HELIX 19 AC1 GLY B 129 ASN B 132 5 4 HELIX 20 AC2 SER B 137 SER B 143 5 7 HELIX 21 AC3 LYS B 146 GLY B 154 1 9 SHEET 1 AA1 5 GLU A 36 TRP A 38 0 SHEET 2 AA1 5 ILE A 5 ALA A 9 1 N ILE A 6 O TRP A 38 SHEET 3 AA1 5 GLY A 71 VAL A 75 1 O VAL A 75 N ALA A 9 SHEET 4 AA1 5 ALA A 98 PHE A 102 1 O PHE A 102 N ALA A 74 SHEET 5 AA1 5 TYR A 134 TYR A 135 1 O TYR A 135 N LEU A 101 SHEET 1 AA2 5 GLU B 36 TRP B 38 0 SHEET 2 AA2 5 ILE B 5 ALA B 9 1 N ILE B 6 O TRP B 38 SHEET 3 AA2 5 GLY B 71 VAL B 75 1 O VAL B 75 N ALA B 9 SHEET 4 AA2 5 ALA B 98 PHE B 102 1 O PHE B 100 N ALA B 74 SHEET 5 AA2 5 TYR B 134 TYR B 135 1 O TYR B 135 N LEU B 101 SSBOND 1 CYS A 109 CYS B 109 1555 4555 2.06 CISPEP 1 THR A 79 PRO A 80 0 -0.01 CISPEP 2 THR B 79 PRO B 80 0 3.53 CRYST1 93.573 93.573 63.124 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010687 0.006170 0.000000 0.00000 SCALE2 0.000000 0.012340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015842 0.00000