HEADER PLANT PROTEIN 13-JUL-23 8PS7 TITLE CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA LYR4 KINASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSM-DOMAIN RECEPTOR-LIKE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MEDICAGO TRUNCATULA; SOURCE 3 ORGANISM_COMMON: BARREL MEDIC; SOURCE 4 ORGANISM_TAXID: 3880; SOURCE 5 GENE: 11433363, MTR_5G085790, MTRUNA17_CHR5G0439331; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2 KEYWDS KINASE, IMMUNITY, LYSM, PLANT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.SIMONSEN,K.GYSEL,M.LAURSEN,K.R.ANDERSEN REVDAT 1 06-NOV-24 8PS7 0 JRNL AUTH B.SIMONSEN,H.RUBSAM,M.V.KOLTE,M.M.LARSEN,C.KRONAUER,K.GYSEL, JRNL AUTH 2 M.LAURSEN,F.FENG,G.KAYA,G.E.D.OLDROYD,J.STOUGAARD,S.FORT, JRNL AUTH 3 S.RADUTOIU,K.R.ANDERSEN JRNL TITL THE MEDICAGO TRUNCATULA LYR4 INTRACELLULAR DOMAIN SERVES AS JRNL TITL 2 A SCAFFOLD IN IMMUNITY SIGNALING INDEPENDENT OF ITS JRNL TITL 3 PHOSPHORYLATION ACTIVITY JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL DOI 10.1101/2024.10.23.619817 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 56.7 REMARK 3 NUMBER OF REFLECTIONS : 18578 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.269 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1465 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.1200 - 4.5300 1.00 3111 246 0.2099 0.2622 REMARK 3 2 4.5300 - 3.5900 1.00 3030 244 0.1797 0.2211 REMARK 3 3 3.5900 - 3.1400 1.00 3012 250 0.2115 0.2774 REMARK 3 4 3.1400 - 2.8500 0.90 2672 264 0.2509 0.3058 REMARK 3 5 2.8500 - 2.6500 0.70 2101 183 0.2739 0.2721 REMARK 3 6 2.6500 - 2.4900 0.44 1318 102 0.2812 0.3228 REMARK 3 7 2.4900 - 2.3700 0.28 854 65 0.2882 0.3570 REMARK 3 8 2.3700 - 2.2600 0.19 568 56 0.3142 0.3218 REMARK 3 9 2.2600 - 2.1800 0.12 356 42 0.2941 0.3212 REMARK 3 10 2.1800 - 2.1000 0.03 91 13 0.3151 0.3576 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.557 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4552 REMARK 3 ANGLE : 0.479 6151 REMARK 3 CHIRALITY : 0.038 676 REMARK 3 PLANARITY : 0.002 785 REMARK 3 DIHEDRAL : 13.516 1670 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 340 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.6384 9.2838 -2.0069 REMARK 3 T TENSOR REMARK 3 T11: 0.3740 T22: 0.4636 REMARK 3 T33: 0.4212 T12: -0.0071 REMARK 3 T13: -0.0048 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 2.8066 L22: 4.7848 REMARK 3 L33: 2.4826 L12: 2.4763 REMARK 3 L13: -1.9758 L23: -0.0966 REMARK 3 S TENSOR REMARK 3 S11: -0.1415 S12: 0.4409 S13: 0.3165 REMARK 3 S21: -0.4185 S22: -0.1611 S23: -0.3957 REMARK 3 S31: 0.0967 S32: -0.0907 S33: 0.2678 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 376 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.9474 16.3188 3.0988 REMARK 3 T TENSOR REMARK 3 T11: 0.4998 T22: 0.7107 REMARK 3 T33: 0.3401 T12: -0.2810 REMARK 3 T13: 0.1021 T23: -0.0176 REMARK 3 L TENSOR REMARK 3 L11: 9.4665 L22: 6.0648 REMARK 3 L33: 4.5563 L12: 0.1268 REMARK 3 L13: -3.0836 L23: -4.6822 REMARK 3 S TENSOR REMARK 3 S11: 0.5339 S12: -1.6687 S13: 1.0699 REMARK 3 S21: 1.0767 S22: -0.6050 S23: -0.7704 REMARK 3 S31: -1.2156 S32: 1.1638 S33: -0.0621 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 392 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.0263 7.4500 -7.1383 REMARK 3 T TENSOR REMARK 3 T11: 0.2774 T22: 0.4238 REMARK 3 T33: 0.0943 T12: -0.0078 REMARK 3 T13: -0.0239 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 2.9430 L22: 2.2050 REMARK 3 L33: 2.8679 L12: -0.6987 REMARK 3 L13: -2.0518 L23: 0.7749 REMARK 3 S TENSOR REMARK 3 S11: 0.3861 S12: 0.0669 S13: 0.1927 REMARK 3 S21: -0.0479 S22: -0.5541 S23: 0.1993 REMARK 3 S31: -0.0392 S32: -0.6791 S33: 0.0993 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 447 THROUGH 492 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6871 6.1534 -13.6389 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.2001 REMARK 3 T33: 0.0678 T12: 0.0032 REMARK 3 T13: 0.0009 T23: 0.0217 REMARK 3 L TENSOR REMARK 3 L11: 1.5423 L22: 3.9684 REMARK 3 L33: 1.6262 L12: -0.0703 REMARK 3 L13: -0.1928 L23: 0.0119 REMARK 3 S TENSOR REMARK 3 S11: 0.0156 S12: 0.0574 S13: -0.0099 REMARK 3 S21: -0.1959 S22: 0.0468 S23: 0.1464 REMARK 3 S31: -0.3521 S32: 0.1026 S33: -0.0518 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 493 THROUGH 522 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.5200 -0.4570 3.4941 REMARK 3 T TENSOR REMARK 3 T11: 0.3892 T22: 0.2686 REMARK 3 T33: 0.2545 T12: -0.1279 REMARK 3 T13: 0.0139 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 2.9680 L22: 1.9025 REMARK 3 L33: 3.6383 L12: -2.3664 REMARK 3 L13: 1.8864 L23: -1.2584 REMARK 3 S TENSOR REMARK 3 S11: 0.5954 S12: -0.2151 S13: -0.3897 REMARK 3 S21: -0.3588 S22: -0.2564 S23: 0.2343 REMARK 3 S31: 0.2108 S32: -0.5081 S33: -0.3169 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 523 THROUGH 577 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0905 -5.3119 -4.8706 REMARK 3 T TENSOR REMARK 3 T11: 0.2084 T22: 0.2867 REMARK 3 T33: 0.0407 T12: 0.0344 REMARK 3 T13: 0.0457 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 0.8848 L22: 0.1099 REMARK 3 L33: 2.8216 L12: -0.1603 REMARK 3 L13: 0.5402 L23: -0.2421 REMARK 3 S TENSOR REMARK 3 S11: -0.0050 S12: -0.0053 S13: -0.2258 REMARK 3 S21: -0.0854 S22: 0.0014 S23: 0.0401 REMARK 3 S31: 0.3446 S32: 0.3698 S33: -0.0088 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 578 THROUGH 599 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2275 -15.8376 -19.9276 REMARK 3 T TENSOR REMARK 3 T11: 0.3744 T22: 0.2594 REMARK 3 T33: 0.1690 T12: 0.0860 REMARK 3 T13: 0.0123 T23: -0.0709 REMARK 3 L TENSOR REMARK 3 L11: 5.3434 L22: 1.1021 REMARK 3 L33: 4.2878 L12: -0.5629 REMARK 3 L13: -1.0708 L23: -0.6423 REMARK 3 S TENSOR REMARK 3 S11: -0.3108 S12: 0.6300 S13: -0.8789 REMARK 3 S21: -0.0820 S22: 0.1344 S23: 0.1462 REMARK 3 S31: 0.3486 S32: -0.1117 S33: 0.1318 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 600 THROUGH 636 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5281 0.8646 -17.5508 REMARK 3 T TENSOR REMARK 3 T11: 0.1073 T22: 0.4143 REMARK 3 T33: 0.0932 T12: 0.0148 REMARK 3 T13: 0.0677 T23: 0.0496 REMARK 3 L TENSOR REMARK 3 L11: 1.0023 L22: 3.6126 REMARK 3 L33: 4.0416 L12: -0.0062 REMARK 3 L13: -1.1856 L23: 1.0443 REMARK 3 S TENSOR REMARK 3 S11: 0.0517 S12: 0.2666 S13: 0.0540 REMARK 3 S21: -0.0102 S22: 0.0335 S23: -0.4571 REMARK 3 S31: -0.1656 S32: 0.5810 S33: -0.1159 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 340 THROUGH 446 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4666 25.8865 -31.4627 REMARK 3 T TENSOR REMARK 3 T11: 0.3245 T22: 0.4571 REMARK 3 T33: 0.2465 T12: 0.0002 REMARK 3 T13: -0.0364 T23: -0.0277 REMARK 3 L TENSOR REMARK 3 L11: 3.3891 L22: 2.1998 REMARK 3 L33: 1.9027 L12: 0.4653 REMARK 3 L13: 1.5233 L23: 0.8930 REMARK 3 S TENSOR REMARK 3 S11: 0.1427 S12: 0.0999 S13: -0.2548 REMARK 3 S21: -0.5028 S22: -0.2599 S23: 0.4782 REMARK 3 S31: 0.0643 S32: -0.4223 S33: 0.1243 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 447 THROUGH 534 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.9350 30.1500 -30.0186 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2823 REMARK 3 T33: 0.1173 T12: -0.0265 REMARK 3 T13: -0.0106 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.7227 L22: 1.6558 REMARK 3 L33: 0.7973 L12: -0.8208 REMARK 3 L13: -0.4946 L23: -0.0665 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: 0.0749 S13: -0.0914 REMARK 3 S21: -0.1248 S22: 0.0273 S23: 0.2268 REMARK 3 S31: 0.1520 S32: 0.1445 S33: -0.0194 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 535 THROUGH 636 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9119 41.2277 -20.2973 REMARK 3 T TENSOR REMARK 3 T11: 0.1428 T22: 0.2005 REMARK 3 T33: 0.0531 T12: 0.0005 REMARK 3 T13: -0.0094 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 1.7675 L22: 2.8676 REMARK 3 L33: 3.7137 L12: -0.0103 REMARK 3 L13: 0.3723 L23: 0.1972 REMARK 3 S TENSOR REMARK 3 S11: -0.1132 S12: 0.0096 S13: 0.2825 REMARK 3 S21: -0.1854 S22: 0.1118 S23: -0.1165 REMARK 3 S31: -0.3198 S32: 0.0780 S33: -0.0096 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8PS7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292131388. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979491 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18580 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.124 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.2 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 70.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, SODIUM CACODYLATE REMARK 280 TRIHYDRATE, PEG8000, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.12100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 432 REMARK 465 LYS A 433 REMARK 465 ASN A 434 REMARK 465 LYS A 435 REMARK 465 ASP A 436 REMARK 465 LYS A 437 REMARK 465 ASN A 438 REMARK 465 TYR A 439 REMARK 465 SER A 440 REMARK 465 ASN A 441 REMARK 465 SER A 442 REMARK 465 ASP A 559 REMARK 465 LYS A 560 REMARK 465 SER A 561 REMARK 465 ASN A 562 REMARK 465 GLY A 563 REMARK 465 LEU A 564 REMARK 465 GLY A 565 REMARK 465 GLU B 432 REMARK 465 LYS B 433 REMARK 465 ASN B 434 REMARK 465 LYS B 435 REMARK 465 ASP B 436 REMARK 465 LYS B 437 REMARK 465 ASN B 438 REMARK 465 TYR B 439 REMARK 465 SER B 440 REMARK 465 ASN B 441 REMARK 465 SER B 442 REMARK 465 ALA B 498 REMARK 465 ARG B 499 REMARK 465 VAL B 500 REMARK 465 MET B 501 REMARK 465 GLU B 502 REMARK 465 ASN B 503 REMARK 465 GLU B 504 REMARK 465 GLY B 505 REMARK 465 GLY B 506 REMARK 465 ASP B 507 REMARK 465 GLU B 508 REMARK 465 GLY B 509 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 341 -130.48 54.74 REMARK 500 SER A 357 54.46 -97.44 REMARK 500 GLU A 358 26.83 49.62 REMARK 500 LYS A 361 -179.55 -66.04 REMARK 500 ASN A 422 6.57 86.87 REMARK 500 ASN A 423 -135.57 65.85 REMARK 500 LYS A 475 -10.66 83.85 REMARK 500 SER A 493 -71.23 -132.70 REMARK 500 LEU A 497 -26.02 69.48 REMARK 500 ASP A 596 -10.20 70.27 REMARK 500 GLU B 358 -27.59 74.16 REMARK 500 ASN B 390 43.82 -76.92 REMARK 500 ASN B 423 -150.29 57.86 REMARK 500 LYS B 475 -10.79 79.60 REMARK 500 ARG B 595 -123.64 50.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 896 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 897 DISTANCE = 7.27 ANGSTROMS REMARK 525 HOH A 898 DISTANCE = 7.50 ANGSTROMS REMARK 525 HOH B 874 DISTANCE = 6.83 ANGSTROMS REMARK 525 HOH B 875 DISTANCE = 7.13 ANGSTROMS DBREF 8PS7 A 340 636 UNP G7K7K0 G7K7K0_MEDTR 340 636 DBREF 8PS7 B 340 636 UNP G7K7K0 G7K7K0_MEDTR 340 636 SEQRES 1 A 297 SER LEU THR VAL TYR LYS TYR GLU ASP LEU GLN ASN ALA SEQRES 2 A 297 THR ASN PHE PHE SER GLU GLU ASN LYS ILE LYS GLY SER SEQRES 3 A 297 VAL TYR ARG ALA SER PHE LYS GLY ASP ASP ALA ALA VAL SEQRES 4 A 297 LYS ILE LEU LYS GLY ASP VAL SER SER GLU ILE ASN ILE SEQRES 5 A 297 LEU LYS ARG ILE ASN HIS ALA ASN ILE ILE ARG LEU SER SEQRES 6 A 297 GLY PHE CYS VAL TYR LYS GLY ASN THR TYR LEU VAL TYR SEQRES 7 A 297 GLU PHE ALA GLU ASN ASN SER LEU ASP ASP TRP LEU HIS SEQRES 8 A 297 SER GLU LYS ASN LYS ASP LYS ASN TYR SER ASN SER MET SEQRES 9 A 297 CYS LEU SER TRP PHE GLN ARG VAL GLN ILE ALA HIS ASP SEQRES 10 A 297 VAL ALA ASP ALA LEU ASN TYR LEU HIS ASN TYR ALA ASN SEQRES 11 A 297 PRO PRO HIS VAL HIS LYS ASN LEU LYS SER GLY ASN ILE SEQRES 12 A 297 LEU LEU ASP GLY LYS PHE ARG GLY LYS VAL SER ASN PHE SEQRES 13 A 297 GLY LEU ALA ARG VAL MET GLU ASN GLU GLY GLY ASP GLU SEQRES 14 A 297 GLY PHE GLN LEU THR ARG HIS VAL ILE GLY THR GLN GLY SEQRES 15 A 297 TYR MET ALA PRO GLU TYR ILE GLU ASN GLY LEU ILE THR SEQRES 16 A 297 PRO LYS MET ASP VAL PHE ALA PHE GLY VAL VAL ILE LEU SEQRES 17 A 297 GLU LEU LEU SER GLY ARG GLU VAL VAL GLY SER ASP LYS SEQRES 18 A 297 SER ASN GLY LEU GLY ASP GLN LEU LEU ALA SER THR VAL SEQRES 19 A 297 ASN GLN VAL LEU GLU GLY ASP ASN VAL ARG GLU LYS LEU SEQRES 20 A 297 ARG GLY PHE MET ASP PRO ASN LEU ARG ASP GLU TYR PRO SEQRES 21 A 297 LEU ASP LEU ALA PHE SER MET ALA GLU ILE ALA LYS ARG SEQRES 22 A 297 CYS VAL ALA ARG ASP LEU ASN SER ARG PRO ASN VAL SER SEQRES 23 A 297 GLU VAL PHE MET ILE LEU SER LYS ILE GLN SER SEQRES 1 B 297 SER LEU THR VAL TYR LYS TYR GLU ASP LEU GLN ASN ALA SEQRES 2 B 297 THR ASN PHE PHE SER GLU GLU ASN LYS ILE LYS GLY SER SEQRES 3 B 297 VAL TYR ARG ALA SER PHE LYS GLY ASP ASP ALA ALA VAL SEQRES 4 B 297 LYS ILE LEU LYS GLY ASP VAL SER SER GLU ILE ASN ILE SEQRES 5 B 297 LEU LYS ARG ILE ASN HIS ALA ASN ILE ILE ARG LEU SER SEQRES 6 B 297 GLY PHE CYS VAL TYR LYS GLY ASN THR TYR LEU VAL TYR SEQRES 7 B 297 GLU PHE ALA GLU ASN ASN SER LEU ASP ASP TRP LEU HIS SEQRES 8 B 297 SER GLU LYS ASN LYS ASP LYS ASN TYR SER ASN SER MET SEQRES 9 B 297 CYS LEU SER TRP PHE GLN ARG VAL GLN ILE ALA HIS ASP SEQRES 10 B 297 VAL ALA ASP ALA LEU ASN TYR LEU HIS ASN TYR ALA ASN SEQRES 11 B 297 PRO PRO HIS VAL HIS LYS ASN LEU LYS SER GLY ASN ILE SEQRES 12 B 297 LEU LEU ASP GLY LYS PHE ARG GLY LYS VAL SER ASN PHE SEQRES 13 B 297 GLY LEU ALA ARG VAL MET GLU ASN GLU GLY GLY ASP GLU SEQRES 14 B 297 GLY PHE GLN LEU THR ARG HIS VAL ILE GLY THR GLN GLY SEQRES 15 B 297 TYR MET ALA PRO GLU TYR ILE GLU ASN GLY LEU ILE THR SEQRES 16 B 297 PRO LYS MET ASP VAL PHE ALA PHE GLY VAL VAL ILE LEU SEQRES 17 B 297 GLU LEU LEU SER GLY ARG GLU VAL VAL GLY SER ASP LYS SEQRES 18 B 297 SER ASN GLY LEU GLY ASP GLN LEU LEU ALA SER THR VAL SEQRES 19 B 297 ASN GLN VAL LEU GLU GLY ASP ASN VAL ARG GLU LYS LEU SEQRES 20 B 297 ARG GLY PHE MET ASP PRO ASN LEU ARG ASP GLU TYR PRO SEQRES 21 B 297 LEU ASP LEU ALA PHE SER MET ALA GLU ILE ALA LYS ARG SEQRES 22 B 297 CYS VAL ALA ARG ASP LEU ASN SER ARG PRO ASN VAL SER SEQRES 23 B 297 GLU VAL PHE MET ILE LEU SER LYS ILE GLN SER HET GOL A 701 6 HET SO4 A 702 5 HET GOL A 703 14 HET ANP A 704 44 HET GOL B 701 6 HET SO4 B 702 5 HET ANP B 703 44 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM ANP PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 3(C3 H8 O3) FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 ANP 2(C10 H17 N6 O12 P3) FORMUL 10 HOH *173(H2 O) HELIX 1 AA1 LYS A 345 THR A 353 1 9 HELIX 2 AA2 VAL A 385 LYS A 393 1 9 HELIX 3 AA3 SER A 424 HIS A 430 1 7 HELIX 4 AA4 SER A 446 TYR A 467 1 22 HELIX 5 AA5 GLN A 511 MET A 523 1 13 HELIX 6 AA6 ALA A 524 GLY A 531 1 8 HELIX 7 AA7 THR A 534 GLY A 552 1 19 HELIX 8 AA8 LEU A 568 GLU A 578 1 11 HELIX 9 AA9 ASN A 581 MET A 590 1 10 HELIX 10 AB1 ASP A 591 ARG A 595 5 5 HELIX 11 AB2 PRO A 599 VAL A 614 1 16 HELIX 12 AB3 ASP A 617 ARG A 621 5 5 HELIX 13 AB4 ASN A 623 ILE A 634 1 12 HELIX 14 AB5 LYS B 345 THR B 353 1 9 HELIX 15 AB6 ILE B 391 ILE B 395 5 5 HELIX 16 AB7 SER B 424 SER B 431 1 8 HELIX 17 AB8 SER B 446 TYR B 467 1 22 HELIX 18 AB9 LYS B 478 GLY B 480 5 3 HELIX 19 AC1 GLN B 511 MET B 523 1 13 HELIX 20 AC2 ALA B 524 GLY B 531 1 8 HELIX 21 AC3 THR B 534 GLY B 552 1 19 HELIX 22 AC4 LEU B 569 GLU B 578 1 10 HELIX 23 AC5 ASN B 581 MET B 590 1 10 HELIX 24 AC6 ASP B 591 ARG B 595 5 5 HELIX 25 AC7 PRO B 599 VAL B 614 1 16 HELIX 26 AC8 ASN B 623 SER B 636 1 14 SHEET 1 AA1 4 VAL A 366 ALA A 369 0 SHEET 2 AA1 4 ALA A 376 LYS A 382 -1 O VAL A 378 N TYR A 367 SHEET 3 AA1 4 ASN A 412 GLU A 418 -1 O THR A 413 N LEU A 381 SHEET 4 AA1 4 LEU A 403 TYR A 409 -1 N CYS A 407 O TYR A 414 SHEET 1 AA2 2 LEU A 483 LEU A 484 0 SHEET 2 AA2 2 GLY A 490 LYS A 491 -1 O LYS A 491 N LEU A 483 SHEET 1 AA3 5 THR B 342 VAL B 343 0 SHEET 2 AA3 5 LEU B 403 TYR B 409 1 O PHE B 406 N THR B 342 SHEET 3 AA3 5 ASN B 412 GLU B 418 -1 O TYR B 414 N CYS B 407 SHEET 4 AA3 5 ALA B 376 LYS B 382 -1 N LEU B 381 O THR B 413 SHEET 5 AA3 5 VAL B 366 ALA B 369 -1 N ALA B 369 O ALA B 376 SHEET 1 AA4 2 ILE B 482 LEU B 484 0 SHEET 2 AA4 2 GLY B 490 VAL B 492 -1 O LYS B 491 N LEU B 483 SHEET 1 AA5 2 VAL B 556 SER B 558 0 SHEET 2 AA5 2 ASP B 566 LEU B 568 -1 O GLN B 567 N GLY B 557 CISPEP 1 ASN A 469 PRO A 470 0 0.24 CISPEP 2 ASN B 469 PRO B 470 0 -1.64 CRYST1 51.684 78.242 70.365 90.00 90.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019348 0.000000 0.000135 0.00000 SCALE2 0.000000 0.012781 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014212 0.00000