HEADER TRANSFERASE 17-JUL-23 8PVJ TITLE STRUCTURE OF LUMAZINE SYNTHASE DETERMINED BY CRYOEM AT 100 KEV COMPND MOL_ID: 1; COMPND 2 MOLECULE: 6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DMRL SYNTHASE,LS,LUMAZINE SYNTHASE; COMPND 5 EC: 2.5.1.78; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 63363; SOURCE 4 GENE: RIBH, AQ_132; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LUMAZINE SYNTHASE, TRANSFERASE EXPDTA ELECTRON MICROSCOPY AUTHOR G.MCMULLAN,K.NAYDENOVA,D.MIHAYLOV,M.J.PEET,H.WILSON,K.YAMASHITA, AUTHOR 2 J.L.DICKERSON,S.CHEN,G.CANNONE,Y.LEE,K.A.HUTCHINGS,O.GITTINS, AUTHOR 3 M.SOBHY,T.WELLS,M.M.EL-GOMATI,J.DALBY,M.MEFFERT,C.SCHULZE-BRIESE, AUTHOR 4 R.HENDERSON,C.J.RUSSO REVDAT 2 06-DEC-23 8PVJ 1 JRNL REVDAT 1 29-NOV-23 8PVJ 0 JRNL AUTH G.MCMULLAN,K.NAYDENOVA,D.MIHAYLOV,K.YAMASHITA,M.J.PEET, JRNL AUTH 2 H.WILSON,J.L.DICKERSON,S.CHEN,G.CANNONE,Y.LEE,K.A.HUTCHINGS, JRNL AUTH 3 O.GITTINS,M.A.SOBHY,T.WELLS,M.M.EL-GOMATI,J.DALBY,M.MEFFERT, JRNL AUTH 4 C.SCHULZE-BRIESE,R.HENDERSON,C.J.RUSSO JRNL TITL STRUCTURE DETERMINATION BY CRYOEM AT 100 KEV. JRNL REF PROC.NATL.ACAD.SCI.USA V. 120 05120 2023 JRNL REFN ESSN 1091-6490 JRNL PMID 38011573 JRNL DOI 10.1073/PNAS.2312905120 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERVALCAT REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1HQK REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.000 REMARK 3 NUMBER OF PARTICLES : 8565 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8PVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JUL-23. REMARK 100 THE DEPOSITION ID IS D_1292131856. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LUMAZINE SYNTHASE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : JEOL 1400/HR + YPS FEG REMARK 245 DETECTOR TYPE : DECTRIS SINGLA (1K X 1K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 8000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 100 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 60-MERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 60-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.500000 0.809017 50.63332 REMARK 350 BIOMT2 2 0.500000 0.809017 0.309017 -81.92655 REMARK 350 BIOMT3 2 -0.809017 0.309017 0.500000 132.56010 REMARK 350 BIOMT1 3 -0.809017 -0.309017 0.500000 214.48653 REMARK 350 BIOMT2 3 0.309017 0.500001 0.809017 -81.92661 REMARK 350 BIOMT3 3 -0.500000 0.809017 -0.309018 132.56019 REMARK 350 BIOMT1 4 -0.809017 0.309017 -0.500000 265.12006 REMARK 350 BIOMT2 4 -0.309017 0.500001 0.809017 -0.00009 REMARK 350 BIOMT3 4 0.500000 0.809017 -0.309018 0.00015 REMARK 350 BIOMT1 5 0.309017 0.500000 -0.809017 132.56009 REMARK 350 BIOMT2 5 -0.500000 0.809017 0.309017 50.63334 REMARK 350 BIOMT3 5 0.809017 0.309017 0.500000 -81.92656 REMARK 350 BIOMT1 6 0.500000 -0.809017 0.309017 132.56010 REMARK 350 BIOMT2 6 0.809017 0.309017 -0.500000 50.63332 REMARK 350 BIOMT3 6 0.309017 0.500000 0.809017 -81.92655 REMARK 350 BIOMT1 7 -0.309018 -0.500000 0.809017 132.56019 REMARK 350 BIOMT2 7 0.500000 -0.809017 -0.309017 214.48653 REMARK 350 BIOMT3 7 0.809017 0.309017 0.500001 -81.92661 REMARK 350 BIOMT1 8 -0.309018 0.500000 0.809017 0.00015 REMARK 350 BIOMT2 8 -0.500000 -0.809017 0.309017 265.12006 REMARK 350 BIOMT3 8 0.809017 -0.309017 0.500001 -0.00009 REMARK 350 BIOMT1 9 0.500000 0.809017 0.309017 -81.92656 REMARK 350 BIOMT2 9 -0.809017 0.309017 0.500000 132.56009 REMARK 350 BIOMT3 9 0.309017 -0.500000 0.809017 50.63334 REMARK 350 BIOMT1 10 0.000000 0.000000 1.000000 -0.00003 REMARK 350 BIOMT2 10 1.000000 0.000000 0.000000 0.00004 REMARK 350 BIOMT3 10 0.000000 1.000000 0.000000 -0.00001 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 -0.00004 REMARK 350 BIOMT2 11 0.000000 0.000000 1.000000 0.00001 REMARK 350 BIOMT3 11 1.000000 0.000000 0.000000 0.00003 REMARK 350 BIOMT1 12 -0.500000 -0.809017 0.309017 265.12004 REMARK 350 BIOMT2 12 0.809017 -0.309017 0.500001 -0.00011 REMARK 350 BIOMT3 12 -0.309018 0.500000 0.809017 0.00016 REMARK 350 BIOMT1 13 -0.500000 0.809017 -0.309018 132.56016 REMARK 350 BIOMT2 13 -0.809017 -0.309017 0.500000 214.48653 REMARK 350 BIOMT3 13 0.309017 0.500001 0.809017 -81.92661 REMARK 350 BIOMT1 14 0.309017 0.499999 0.809017 -81.92655 REMARK 350 BIOMT2 14 0.499999 -0.809018 0.309017 132.56019 REMARK 350 BIOMT3 14 0.809017 0.309017 -0.499999 50.63332 REMARK 350 BIOMT1 15 -1.000000 0.000000 -0.000001 265.12016 REMARK 350 BIOMT2 15 0.000000 -1.000000 0.000001 265.11992 REMARK 350 BIOMT3 15 -0.000001 0.000001 1.000000 0.00008 REMARK 350 BIOMT1 16 0.809016 -0.309019 0.500000 0.00029 REMARK 350 BIOMT2 16 0.309017 -0.500000 -0.809017 265.12009 REMARK 350 BIOMT3 16 0.500001 0.809016 -0.309016 -0.00020 REMARK 350 BIOMT1 17 0.809016 0.309017 0.500001 -81.92662 REMARK 350 BIOMT2 17 -0.309019 -0.500000 0.809016 132.56030 REMARK 350 BIOMT3 17 0.500000 -0.809017 -0.309016 214.48650 REMARK 350 BIOMT1 18 -0.500000 -0.809017 -0.309018 347.04665 REMARK 350 BIOMT2 18 0.809017 -0.309017 -0.499999 132.55984 REMARK 350 BIOMT3 18 0.309016 -0.500000 0.809017 50.63358 REMARK 350 BIOMT1 19 -0.500000 0.809017 0.309016 50.63352 REMARK 350 BIOMT2 19 -0.809017 -0.309017 -0.500000 347.04663 REMARK 350 BIOMT3 19 -0.309018 -0.499999 0.809017 132.55993 REMARK 350 BIOMT1 20 0.809017 -0.309018 -0.500000 132.56020 REMARK 350 BIOMT2 20 -0.309017 0.500000 -0.809017 214.48646 REMARK 350 BIOMT3 20 0.500001 0.809016 0.309017 -81.92663 REMARK 350 BIOMT1 21 0.499999 -0.809018 -0.309017 214.48682 REMARK 350 BIOMT2 21 -0.809017 -0.309016 -0.500000 347.04650 REMARK 350 BIOMT3 21 0.309018 0.499999 -0.809017 132.55994 REMARK 350 BIOMT1 22 0.499999 -0.809017 0.309018 132.56006 REMARK 350 BIOMT2 22 -0.809018 -0.309016 0.499999 214.48664 REMARK 350 BIOMT3 22 -0.309017 -0.500000 -0.809017 347.04657 REMARK 350 BIOMT1 23 0.809017 -0.309017 0.500001 -0.00009 REMARK 350 BIOMT2 23 -0.309018 0.500000 0.809016 0.00011 REMARK 350 BIOMT3 23 -0.500000 -0.809017 0.309017 265.12002 REMARK 350 BIOMT1 24 0.309017 -0.500000 -0.809017 265.12000 REMARK 350 BIOMT2 24 0.500001 0.809017 -0.309016 -0.00016 REMARK 350 BIOMT3 24 0.809016 -0.309018 0.500000 0.00017 REMARK 350 BIOMT1 25 -0.809017 -0.309016 -0.500001 347.04654 REMARK 350 BIOMT2 25 0.309019 0.499999 -0.809017 132.55994 REMARK 350 BIOMT3 25 0.499999 -0.809018 -0.309016 214.48671 REMARK 350 BIOMT1 26 -0.809017 0.309019 0.499999 132.55992 REMARK 350 BIOMT2 26 -0.309016 0.499999 -0.809018 214.48675 REMARK 350 BIOMT3 26 -0.500001 -0.809017 -0.309016 347.04652 REMARK 350 BIOMT1 27 0.309017 0.500001 0.809016 -81.92664 REMARK 350 BIOMT2 27 -0.500000 0.809017 -0.309018 132.56020 REMARK 350 BIOMT3 27 -0.809017 -0.309016 0.500000 214.48644 REMARK 350 BIOMT1 28 -0.499999 0.809018 0.309017 50.63318 REMARK 350 BIOMT2 28 0.809018 0.309016 0.500000 -81.92650 REMARK 350 BIOMT3 28 0.309017 0.500000 -0.809017 132.56006 REMARK 350 BIOMT1 29 -0.809017 -0.309018 -0.500000 347.04664 REMARK 350 BIOMT2 29 -0.309018 -0.499999 0.809017 132.55988 REMARK 350 BIOMT3 29 -0.500000 0.809017 0.309016 50.63356 REMARK 350 BIOMT1 30 0.809017 0.309016 0.500000 -81.92654 REMARK 350 BIOMT2 30 0.309017 0.500000 -0.809017 132.55997 REMARK 350 BIOMT3 30 -0.499999 0.809017 0.309017 50.63329 REMARK 350 BIOMT1 31 0.500001 0.809016 0.309018 -81.92667 REMARK 350 BIOMT2 31 0.809017 -0.309018 -0.500000 132.56002 REMARK 350 BIOMT3 31 -0.309016 0.500001 -0.809017 214.48637 REMARK 350 BIOMT1 32 0.500001 0.809017 -0.309016 -0.00021 REMARK 350 BIOMT2 32 0.809016 -0.309018 0.500001 0.00007 REMARK 350 BIOMT3 32 0.309018 -0.500000 -0.809017 265.11986 REMARK 350 BIOMT1 33 0.809017 0.309017 -0.499999 50.63325 REMARK 350 BIOMT2 33 0.309016 0.500000 0.809017 -81.92652 REMARK 350 BIOMT3 33 0.500000 -0.809017 0.309017 132.55999 REMARK 350 BIOMT1 34 0.500000 -0.809017 -0.309017 214.48647 REMARK 350 BIOMT2 34 0.809016 0.309017 0.500001 -81.92663 REMARK 350 BIOMT3 34 -0.309018 -0.500000 0.809017 132.56017 REMARK 350 BIOMT1 35 -0.309016 -0.500000 -0.809017 347.04653 REMARK 350 BIOMT2 35 0.499999 -0.809017 0.309018 132.55993 REMARK 350 BIOMT3 35 -0.809018 -0.309016 0.499999 214.48673 REMARK 350 BIOMT1 36 -0.309016 0.499999 -0.809018 214.48668 REMARK 350 BIOMT2 36 -0.500000 -0.809017 -0.309016 347.04655 REMARK 350 BIOMT3 36 -0.809017 0.309018 0.499999 132.55996 REMARK 350 BIOMT1 37 0.500000 0.809016 -0.309018 0.00013 REMARK 350 BIOMT2 37 -0.809017 0.309017 -0.500000 265.12000 REMARK 350 BIOMT3 37 -0.309017 0.500001 0.809017 -0.00013 REMARK 350 BIOMT1 38 0.809017 -0.309017 -0.500000 132.55992 REMARK 350 BIOMT2 38 0.309017 -0.500000 0.809017 50.63342 REMARK 350 BIOMT3 38 -0.500000 -0.809017 -0.309017 347.04659 REMARK 350 BIOMT1 39 0.809017 0.309017 -0.500000 50.63336 REMARK 350 BIOMT2 39 -0.309017 -0.500000 -0.809017 347.04657 REMARK 350 BIOMT3 39 -0.500000 0.809017 -0.309017 132.56000 REMARK 350 BIOMT1 40 0.000001 0.000000 -1.000000 265.11985 REMARK 350 BIOMT2 40 1.000000 -0.000001 0.000001 0.00002 REMARK 350 BIOMT3 40 -0.000001 -1.000000 0.000000 265.12016 REMARK 350 BIOMT1 41 0.000001 1.000000 -0.000001 0.00002 REMARK 350 BIOMT2 41 0.000000 -0.000001 -1.000000 265.12020 REMARK 350 BIOMT3 41 -1.000000 0.000001 0.000000 265.11982 REMARK 350 BIOMT1 42 0.000000 -1.000000 0.000001 265.11987 REMARK 350 BIOMT2 42 -0.000001 0.000001 1.000000 0.00006 REMARK 350 BIOMT3 42 -1.000000 0.000000 -0.000001 265.12019 REMARK 350 BIOMT1 43 0.000000 -0.000001 -1.000000 265.12007 REMARK 350 BIOMT2 43 -1.000000 0.000001 0.000000 265.11999 REMARK 350 BIOMT3 43 0.000001 1.000000 -0.000001 0.00006 REMARK 350 BIOMT1 44 -0.309017 0.500000 -0.809017 214.48654 REMARK 350 BIOMT2 44 0.500001 0.809017 0.309017 -81.92660 REMARK 350 BIOMT3 44 0.809017 -0.309018 -0.500000 132.56014 REMARK 350 BIOMT1 45 -0.309017 0.500001 0.809017 -0.00010 REMARK 350 BIOMT2 45 0.500000 0.809017 -0.309018 0.00014 REMARK 350 BIOMT3 45 -0.809017 0.309017 -0.500000 265.12004 REMARK 350 BIOMT1 46 -0.809017 0.309017 0.500000 132.56004 REMARK 350 BIOMT2 46 0.309017 -0.500000 0.809017 50.63337 REMARK 350 BIOMT3 46 0.500000 0.809017 0.309017 -81.92657 REMARK 350 BIOMT1 47 -0.000002 -1.000000 -0.000001 265.12040 REMARK 350 BIOMT2 47 0.000001 0.000001 -1.000000 265.11971 REMARK 350 BIOMT3 47 1.000000 -0.000002 0.000001 0.00011 REMARK 350 BIOMT1 48 -0.000002 0.000001 1.000000 0.00011 REMARK 350 BIOMT2 48 -1.000000 0.000001 -0.000002 265.12018 REMARK 350 BIOMT3 48 -0.000001 -1.000000 0.000001 265.11992 REMARK 350 BIOMT1 49 0.309017 -0.500001 -0.809016 265.11996 REMARK 350 BIOMT2 49 -0.500001 -0.809016 0.309017 265.12001 REMARK 350 BIOMT3 49 -0.809016 0.309017 -0.500001 265.12002 REMARK 350 BIOMT1 50 -0.500003 -0.809016 0.309017 265.12020 REMARK 350 BIOMT2 50 -0.809016 0.309019 -0.500001 265.11968 REMARK 350 BIOMT3 50 0.309017 -0.500001 -0.809017 265.12012 REMARK 350 BIOMT1 51 -0.309018 -0.500000 -0.809017 347.04662 REMARK 350 BIOMT2 51 -0.499999 0.809018 -0.309017 132.55982 REMARK 350 BIOMT3 51 0.809017 0.309016 -0.500000 50.63350 REMARK 350 BIOMT1 52 -0.309018 -0.499999 0.809017 132.55989 REMARK 350 BIOMT2 52 -0.500000 0.809018 0.309016 50.63344 REMARK 350 BIOMT3 52 -0.809017 -0.309017 -0.500000 347.04660 REMARK 350 BIOMT1 53 -0.499999 0.809017 -0.309017 132.55988 REMARK 350 BIOMT2 53 0.809017 0.309016 -0.500000 50.63351 REMARK 350 BIOMT3 53 -0.309017 -0.500000 -0.809017 347.04662 REMARK 350 BIOMT1 54 -0.500000 -0.809017 -0.309016 347.04653 REMARK 350 BIOMT2 54 -0.809017 0.309018 0.499999 132.56000 REMARK 350 BIOMT3 54 -0.309016 0.499999 -0.809018 214.48672 REMARK 350 BIOMT1 55 -1.000000 0.000001 0.000000 265.11991 REMARK 350 BIOMT2 55 0.000001 1.000000 -0.000001 0.00007 REMARK 350 BIOMT3 55 0.000000 -0.000001 -1.000000 265.12015 REMARK 350 BIOMT1 56 0.309015 -0.500000 0.809018 50.63362 REMARK 350 BIOMT2 56 -0.500000 -0.809017 -0.309018 347.04666 REMARK 350 BIOMT3 56 0.809018 -0.309018 -0.499999 132.55983 REMARK 350 BIOMT1 57 -0.809018 -0.309016 0.499999 214.48674 REMARK 350 BIOMT2 57 -0.309016 -0.500000 -0.809017 347.04653 REMARK 350 BIOMT3 57 0.499999 -0.809017 0.309018 132.56003 REMARK 350 BIOMT1 58 1.000000 -0.000001 0.000001 0.00009 REMARK 350 BIOMT2 58 -0.000001 -1.000000 0.000000 265.12019 REMARK 350 BIOMT3 58 0.000001 0.000000 -1.000000 265.11990 REMARK 350 BIOMT1 59 -0.809016 0.309017 -0.500001 265.12002 REMARK 350 BIOMT2 59 0.309017 -0.500001 -0.809016 265.12004 REMARK 350 BIOMT3 59 -0.500001 -0.809016 0.309018 265.11994 REMARK 350 BIOMT1 60 0.309018 0.499999 -0.809017 132.55998 REMARK 350 BIOMT2 60 0.499999 -0.809018 -0.309016 214.48668 REMARK 350 BIOMT3 60 -0.809017 -0.309016 -0.500000 347.04655 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 156 REMARK 465 HIS A 157 REMARK 465 PRO A 158 REMARK 465 GLN A 159 REMARK 465 PHE A 160 REMARK 465 GLU A 161 REMARK 465 LYS A 162 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TRP A 155 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 155 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 87 1.57 -68.37 REMARK 500 ALA A 128 53.08 -114.14 REMARK 500 THR A 130 -128.35 -124.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-17968 RELATED DB: EMDB REMARK 900 STRUCTURE OF LUMAZINE SYNTHASE DETERMINED BY CRYOEM AT 100 KEV DBREF 8PVJ A 1 154 UNP O66529 RISB_AQUAE 1 154 SEQADV 8PVJ TRP A 155 UNP O66529 EXPRESSION TAG SEQADV 8PVJ SER A 156 UNP O66529 EXPRESSION TAG SEQADV 8PVJ HIS A 157 UNP O66529 EXPRESSION TAG SEQADV 8PVJ PRO A 158 UNP O66529 EXPRESSION TAG SEQADV 8PVJ GLN A 159 UNP O66529 EXPRESSION TAG SEQADV 8PVJ PHE A 160 UNP O66529 EXPRESSION TAG SEQADV 8PVJ GLU A 161 UNP O66529 EXPRESSION TAG SEQADV 8PVJ LYS A 162 UNP O66529 EXPRESSION TAG SEQRES 1 A 162 MET GLN ILE TYR GLU GLY LYS LEU THR ALA GLU GLY LEU SEQRES 2 A 162 ARG PHE GLY ILE VAL ALA SER ARG PHE ASN HIS ALA LEU SEQRES 3 A 162 VAL ASP ARG LEU VAL GLU GLY ALA ILE ASP CYS ILE VAL SEQRES 4 A 162 ARG HIS GLY GLY ARG GLU GLU ASP ILE THR LEU VAL ARG SEQRES 5 A 162 VAL PRO GLY SER TRP GLU ILE PRO VAL ALA ALA GLY GLU SEQRES 6 A 162 LEU ALA ARG LYS GLU ASP ILE ASP ALA VAL ILE ALA ILE SEQRES 7 A 162 GLY VAL LEU ILE ARG GLY ALA THR PRO HIS PHE ASP TYR SEQRES 8 A 162 ILE ALA SER GLU VAL SER LYS GLY LEU ALA ASN LEU SER SEQRES 9 A 162 LEU GLU LEU ARG LYS PRO ILE THR PHE GLY VAL ILE THR SEQRES 10 A 162 ALA ASP THR LEU GLU GLN ALA ILE GLU ARG ALA GLY THR SEQRES 11 A 162 LYS HIS GLY ASN LYS GLY TRP GLU ALA ALA LEU SER ALA SEQRES 12 A 162 ILE GLU MET ALA ASN LEU PHE LYS SER LEU ARG TRP SER SEQRES 13 A 162 HIS PRO GLN PHE GLU LYS HELIX 1 AA1 ASN A 23 HIS A 41 1 19 HELIX 2 AA2 ARG A 44 GLU A 46 5 3 HELIX 3 AA3 GLY A 55 TRP A 57 5 3 HELIX 4 AA4 GLU A 58 ARG A 68 1 11 HELIX 5 AA5 PRO A 87 ARG A 108 1 22 HELIX 6 AA6 THR A 120 ARG A 127 1 8 HELIX 7 AA7 LYS A 135 TRP A 155 1 21 SHEET 1 AA1 4 ILE A 48 VAL A 53 0 SHEET 2 AA1 4 PHE A 15 SER A 20 1 N ILE A 17 O THR A 49 SHEET 3 AA1 4 ALA A 74 ILE A 82 1 O ILE A 78 N VAL A 18 SHEET 4 AA1 4 ILE A 111 ALA A 118 1 O ILE A 116 N LEU A 81 SHEET 1 AA2 2 ALA A 128 THR A 130 0 SHEET 2 AA2 2 GLY A 133 ASN A 134 -1 O GLY A 133 N GLY A 129 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.309017 -0.500000 0.809017 50.63332 MTRIX2 2 0.500000 0.809017 0.309017 -81.92655 MTRIX3 2 -0.809017 0.309017 0.500000 132.56010 MTRIX1 3 -0.809017 -0.309017 0.500000 214.48653 MTRIX2 3 0.309017 0.500001 0.809017 -81.92661 MTRIX3 3 -0.500000 0.809017 -0.309018 132.56019 MTRIX1 4 -0.809017 0.309017 -0.500000 265.12006 MTRIX2 4 -0.309017 0.500001 0.809017 -0.00009 MTRIX3 4 0.500000 0.809017 -0.309018 0.00015 MTRIX1 5 0.309017 0.500000 -0.809017 132.56009 MTRIX2 5 -0.500000 0.809017 0.309017 50.63334 MTRIX3 5 0.809017 0.309017 0.500000 -81.92656 MTRIX1 6 0.500000 -0.809017 0.309017 132.56010 MTRIX2 6 0.809017 0.309017 -0.500000 50.63332 MTRIX3 6 0.309017 0.500000 0.809017 -81.92655 MTRIX1 7 -0.309018 -0.500000 0.809017 132.56019 MTRIX2 7 0.500000 -0.809017 -0.309017 214.48653 MTRIX3 7 0.809017 0.309017 0.500001 -81.92661 MTRIX1 8 -0.309018 0.500000 0.809017 0.00015 MTRIX2 8 -0.500000 -0.809017 0.309017 265.12006 MTRIX3 8 0.809017 -0.309017 0.500001 -0.00009 MTRIX1 9 0.500000 0.809017 0.309017 -81.92656 MTRIX2 9 -0.809017 0.309017 0.500000 132.56009 MTRIX3 9 0.309017 -0.500000 0.809017 50.63334 MTRIX1 10 0.000000 0.000000 1.000000 -0.00003 MTRIX2 10 1.000000 0.000000 0.000000 0.00004 MTRIX3 10 0.000000 1.000000 0.000000 -0.00001 MTRIX1 11 0.000000 1.000000 0.000000 -0.00004 MTRIX2 11 0.000000 0.000000 1.000000 0.00001 MTRIX3 11 1.000000 0.000000 0.000000 0.00003 MTRIX1 12 -0.500000 -0.809017 0.309017 265.12004 MTRIX2 12 0.809017 -0.309017 0.500001 -0.00011 MTRIX3 12 -0.309018 0.500000 0.809017 0.00016 MTRIX1 13 -0.500000 0.809017 -0.309018 132.56016 MTRIX2 13 -0.809017 -0.309017 0.500000 214.48653 MTRIX3 13 0.309017 0.500001 0.809017 -81.92661 MTRIX1 14 0.309017 0.499999 0.809017 -81.92655 MTRIX2 14 0.499999 -0.809018 0.309017 132.56019 MTRIX3 14 0.809017 0.309017 -0.499999 50.63332 MTRIX1 15 -1.000000 0.000000 -0.000001 265.12016 MTRIX2 15 0.000000 -1.000000 0.000001 265.11992 MTRIX3 15 -0.000001 0.000001 1.000000 0.00008 MTRIX1 16 0.809016 -0.309019 0.500000 0.00029 MTRIX2 16 0.309017 -0.500000 -0.809017 265.12009 MTRIX3 16 0.500001 0.809016 -0.309016 -0.00020 MTRIX1 17 0.809016 0.309017 0.500001 -81.92662 MTRIX2 17 -0.309019 -0.500000 0.809016 132.56030 MTRIX3 17 0.500000 -0.809017 -0.309016 214.48650 MTRIX1 18 -0.500000 -0.809017 -0.309018 347.04665 MTRIX2 18 0.809017 -0.309017 -0.499999 132.55984 MTRIX3 18 0.309016 -0.500000 0.809017 50.63358 MTRIX1 19 -0.500000 0.809017 0.309016 50.63352 MTRIX2 19 -0.809017 -0.309017 -0.500000 347.04663 MTRIX3 19 -0.309018 -0.499999 0.809017 132.55993 MTRIX1 20 0.809017 -0.309018 -0.500000 132.56020 MTRIX2 20 -0.309017 0.500000 -0.809017 214.48646 MTRIX3 20 0.500001 0.809016 0.309017 -81.92663 MTRIX1 21 0.499999 -0.809018 -0.309017 214.48682 MTRIX2 21 -0.809017 -0.309016 -0.500000 347.04650 MTRIX3 21 0.309018 0.499999 -0.809017 132.55994 MTRIX1 22 0.499999 -0.809017 0.309018 132.56006 MTRIX2 22 -0.809018 -0.309016 0.499999 214.48664 MTRIX3 22 -0.309017 -0.500000 -0.809017 347.04657 MTRIX1 23 0.809017 -0.309017 0.500001 -0.00009 MTRIX2 23 -0.309018 0.500000 0.809016 0.00011 MTRIX3 23 -0.500000 -0.809017 0.309017 265.12002 MTRIX1 24 0.309017 -0.500000 -0.809017 265.12000 MTRIX2 24 0.500001 0.809017 -0.309016 -0.00016 MTRIX3 24 0.809016 -0.309018 0.500000 0.00017 MTRIX1 25 -0.809017 -0.309016 -0.500001 347.04654 MTRIX2 25 0.309019 0.499999 -0.809017 132.55994 MTRIX3 25 0.499999 -0.809018 -0.309016 214.48671 MTRIX1 26 -0.809017 0.309019 0.499999 132.55992 MTRIX2 26 -0.309016 0.499999 -0.809018 214.48675 MTRIX3 26 -0.500001 -0.809017 -0.309016 347.04652 MTRIX1 27 0.309017 0.500001 0.809016 -81.92664 MTRIX2 27 -0.500000 0.809017 -0.309018 132.56020 MTRIX3 27 -0.809017 -0.309016 0.500000 214.48644 MTRIX1 28 -0.499999 0.809018 0.309017 50.63318 MTRIX2 28 0.809018 0.309016 0.500000 -81.92650 MTRIX3 28 0.309017 0.500000 -0.809017 132.56006 MTRIX1 29 -0.809017 -0.309018 -0.500000 347.04664 MTRIX2 29 -0.309018 -0.499999 0.809017 132.55988 MTRIX3 29 -0.500000 0.809017 0.309016 50.63356 MTRIX1 30 0.809017 0.309016 0.500000 -81.92654 MTRIX2 30 0.309017 0.500000 -0.809017 132.55997 MTRIX3 30 -0.499999 0.809017 0.309017 50.63329 MTRIX1 31 0.500001 0.809016 0.309018 -81.92667 MTRIX2 31 0.809017 -0.309018 -0.500000 132.56002 MTRIX3 31 -0.309016 0.500001 -0.809017 214.48637 MTRIX1 32 0.500001 0.809017 -0.309016 -0.00021 MTRIX2 32 0.809016 -0.309018 0.500001 0.00007 MTRIX3 32 0.309018 -0.500000 -0.809017 265.11986 MTRIX1 33 0.809017 0.309017 -0.499999 50.63326 MTRIX2 33 0.309016 0.500000 0.809017 -81.92652 MTRIX3 33 0.500000 -0.809017 0.309017 132.55999 MTRIX1 34 0.500000 -0.809017 -0.309017 214.48647 MTRIX2 34 0.809016 0.309017 0.500001 -81.92663 MTRIX3 34 -0.309018 -0.500000 0.809017 132.56017 MTRIX1 35 -0.309016 -0.500000 -0.809017 347.04653 MTRIX2 35 0.499999 -0.809017 0.309018 132.55993 MTRIX3 35 -0.809018 -0.309016 0.499999 214.48673 MTRIX1 36 -0.309016 0.499999 -0.809018 214.48668 MTRIX2 36 -0.500000 -0.809017 -0.309016 347.04655 MTRIX3 36 -0.809017 0.309018 0.499999 132.55996 MTRIX1 37 0.500000 0.809016 -0.309018 0.00013 MTRIX2 37 -0.809017 0.309017 -0.500000 265.12001 MTRIX3 37 -0.309017 0.500001 0.809017 -0.00013 MTRIX1 38 0.809017 -0.309017 -0.500000 132.55992 MTRIX2 38 0.309017 -0.500000 0.809017 50.63342 MTRIX3 38 -0.500000 -0.809017 -0.309017 347.04659 MTRIX1 39 0.809017 0.309017 -0.500000 50.63336 MTRIX2 39 -0.309017 -0.500000 -0.809017 347.04657 MTRIX3 39 -0.500000 0.809017 -0.309017 132.56000 MTRIX1 40 0.000001 0.000000 -1.000000 265.11985 MTRIX2 40 1.000000 -0.000001 0.000001 0.00002 MTRIX3 40 -0.000001 -1.000000 0.000000 265.12017 MTRIX1 41 0.000001 1.000000 -0.000001 0.00002 MTRIX2 41 0.000000 -0.000001 -1.000000 265.12020 MTRIX3 41 -1.000000 0.000001 0.000000 265.11982 MTRIX1 42 0.000000 -1.000000 0.000001 265.11987 MTRIX2 42 -0.000001 0.000001 1.000000 0.00006 MTRIX3 42 -1.000000 0.000000 -0.000001 265.12019 MTRIX1 43 0.000000 -0.000001 -1.000000 265.12007 MTRIX2 43 -1.000000 0.000001 0.000000 265.11999 MTRIX3 43 0.000001 1.000000 -0.000001 0.00006 MTRIX1 44 -0.309017 0.500000 -0.809017 214.48654 MTRIX2 44 0.500001 0.809017 0.309017 -81.92660 MTRIX3 44 0.809017 -0.309018 -0.500000 132.56015 MTRIX1 45 -0.309017 0.500001 0.809017 -0.00010 MTRIX2 45 0.500000 0.809017 -0.309018 0.00014 MTRIX3 45 -0.809017 0.309017 -0.500000 265.12004 MTRIX1 46 -0.809017 0.309017 0.500000 132.56004 MTRIX2 46 0.309017 -0.500000 0.809017 50.63337 MTRIX3 46 0.500000 0.809017 0.309017 -81.92657 MTRIX1 47 -0.000002 -1.000000 -0.000001 265.12040 MTRIX2 47 0.000001 0.000001 -1.000000 265.11971 MTRIX3 47 1.000000 -0.000002 0.000001 0.00011 MTRIX1 48 -0.000002 0.000001 1.000000 0.00011 MTRIX2 48 -1.000000 0.000001 -0.000002 265.12018 MTRIX3 48 -0.000001 -1.000000 0.000001 265.11992 MTRIX1 49 0.309017 -0.500001 -0.809016 265.11996 MTRIX2 49 -0.500001 -0.809016 0.309017 265.12002 MTRIX3 49 -0.809016 0.309017 -0.500001 265.12002 MTRIX1 50 -0.500003 -0.809016 0.309017 265.12020 MTRIX2 50 -0.809016 0.309019 -0.500001 265.11968 MTRIX3 50 0.309017 -0.500001 -0.809017 265.12012 MTRIX1 51 -0.309018 -0.500000 -0.809017 347.04662 MTRIX2 51 -0.499999 0.809018 -0.309017 132.55982 MTRIX3 51 0.809017 0.309016 -0.500000 50.63350 MTRIX1 52 -0.309018 -0.499999 0.809017 132.55989 MTRIX2 52 -0.500000 0.809018 0.309016 50.63344 MTRIX3 52 -0.809017 -0.309017 -0.500000 347.04660 MTRIX1 53 -0.499999 0.809017 -0.309017 132.55988 MTRIX2 53 0.809017 0.309016 -0.500000 50.63351 MTRIX3 53 -0.309017 -0.500000 -0.809017 347.04662 MTRIX1 54 -0.500000 -0.809017 -0.309016 347.04653 MTRIX2 54 -0.809017 0.309018 0.499999 132.56000 MTRIX3 54 -0.309016 0.499999 -0.809018 214.48672 MTRIX1 55 -1.000000 0.000001 0.000000 265.11992 MTRIX2 55 0.000001 1.000000 -0.000001 0.00007 MTRIX3 55 0.000000 -0.000001 -1.000000 265.12015 MTRIX1 56 0.309015 -0.500000 0.809018 50.63362 MTRIX2 56 -0.500000 -0.809017 -0.309018 347.04666 MTRIX3 56 0.809018 -0.309018 -0.499998 132.55983 MTRIX1 57 -0.809018 -0.309016 0.499999 214.48674 MTRIX2 57 -0.309016 -0.500000 -0.809017 347.04653 MTRIX3 57 0.499999 -0.809017 0.309018 132.56003 MTRIX1 58 1.000000 -0.000001 0.000001 0.00009 MTRIX2 58 -0.000001 -1.000000 0.000000 265.12019 MTRIX3 58 0.000001 0.000000 -1.000000 265.11990 MTRIX1 59 -0.809016 0.309017 -0.500001 265.12002 MTRIX2 59 0.309017 -0.500001 -0.809016 265.12004 MTRIX3 59 -0.500001 -0.809016 0.309018 265.11994 MTRIX1 60 0.309018 0.499999 -0.809017 132.55999 MTRIX2 60 0.499999 -0.809018 -0.309016 214.48668 MTRIX3 60 -0.809017 -0.309016 -0.500000 347.04655