HEADER GENE REGULATION 01-AUG-23 8Q1N TITLE CYCLIC PEPTIDE BINDER OF THE WBM-SITE OF WDR5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CYCLIC PEPTIDE INHIBITOR; COMPND 7 CHAIN: a, b; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WDR5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS INHIBITOR, WD-REPEAT, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHMEING,J.Y.CHANG,P.T HART,R.GASPER REVDAT 2 13-SEP-23 8Q1N 1 JRNL REVDAT 1 06-SEP-23 8Q1N 0 JRNL AUTH J.Y.CHANG,C.NEUGEBAUER,S.SCHMEING,G.AMRAHOVA,P.'T HART JRNL TITL MACROCYCLIC PEPTIDES AS INHIBITORS OF WDR5-LNCRNA JRNL TITL 2 INTERACTIONS. JRNL REF CHEM.COMMUN.(CAMB.) V. 59 10656 2023 JRNL REFN ESSN 1364-548X JRNL PMID 37581220 JRNL DOI 10.1039/D3CC03221C REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1-4487_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 58518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 3022 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.9800 - 5.1600 1.00 2866 171 0.1666 0.1940 REMARK 3 2 5.1600 - 4.1000 1.00 2706 151 0.1293 0.1745 REMARK 3 3 4.1000 - 3.5800 1.00 2669 136 0.1505 0.2034 REMARK 3 4 3.5800 - 3.2500 1.00 2655 138 0.1678 0.2091 REMARK 3 5 3.2500 - 3.0200 1.00 2654 134 0.2074 0.2566 REMARK 3 6 3.0200 - 2.8400 1.00 2611 137 0.2160 0.3003 REMARK 3 7 2.8400 - 2.7000 1.00 2626 138 0.2219 0.2771 REMARK 3 8 2.7000 - 2.5800 1.00 2580 164 0.2373 0.2879 REMARK 3 9 2.5800 - 2.4800 1.00 2575 157 0.2559 0.3069 REMARK 3 10 2.4800 - 2.4000 1.00 2595 149 0.2461 0.2936 REMARK 3 11 2.4000 - 2.3200 1.00 2593 138 0.2502 0.3091 REMARK 3 12 2.3200 - 2.2600 1.00 2581 142 0.2502 0.3007 REMARK 3 13 2.2600 - 2.2000 1.00 2582 139 0.2448 0.2736 REMARK 3 14 2.2000 - 2.1400 1.00 2581 148 0.2485 0.3279 REMARK 3 15 2.1400 - 2.0900 1.00 2561 137 0.2746 0.3378 REMARK 3 16 2.0900 - 2.0500 1.00 2566 137 0.2983 0.3527 REMARK 3 17 2.0500 - 2.0100 1.00 2579 136 0.3141 0.3740 REMARK 3 18 2.0100 - 1.9700 1.00 2570 129 0.3408 0.3712 REMARK 3 19 1.9700 - 1.9400 1.00 2581 126 0.3718 0.3623 REMARK 3 20 1.9400 - 1.9000 0.99 2537 136 0.3809 0.3998 REMARK 3 21 1.9000 - 1.8700 0.86 2169 129 0.3929 0.3936 REMARK 3 22 1.8700 - 1.8430 0.41 1059 50 0.4071 0.4020 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 NULL REMARK 3 ANGLE : 1.243 NULL REMARK 3 CHIRALITY : 0.073 826 REMARK 3 PLANARITY : 0.009 902 REMARK 3 DIHEDRAL : 7.793 712 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -10.1294 -30.6504 26.2009 REMARK 3 T TENSOR REMARK 3 T11: 0.2053 T22: 0.3820 REMARK 3 T33: 0.2315 T12: 0.0364 REMARK 3 T13: 0.0080 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.9603 L22: 1.7655 REMARK 3 L33: 0.3267 L12: 0.5151 REMARK 3 L13: 0.0507 L23: -0.2155 REMARK 3 S TENSOR REMARK 3 S11: 0.0384 S12: 0.0203 S13: -0.1074 REMARK 3 S21: -0.0314 S22: -0.0831 S23: -0.0231 REMARK 3 S31: 0.0646 S32: 0.1160 S33: 0.0400 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q1N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292130720. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.843 REMARK 200 RESOLUTION RANGE LOW (A) : 42.980 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 26.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 66.4 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.260 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LI3-CITRATE, 20 W/V% PEG3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.85350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.08700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.08700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 151.28025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.08700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.08700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 50.42675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.08700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.08700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 151.28025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.08700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.08700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 50.42675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 100.85350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, a REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, b REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 592 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 672 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 22 REMARK 465 SER B 22 REMARK 465 ALA B 23 REMARK 465 THR B 24 REMARK 465 GLN B 25 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN B 214 O HOH B 401 1.96 REMARK 500 O HOH A 524 O HOH A 596 2.01 REMARK 500 O HOH A 494 O HOH A 565 2.01 REMARK 500 O HOH B 488 O HOH B 491 2.02 REMARK 500 O GLY A 270 O HOH A 401 2.03 REMARK 500 O HOH A 558 O HOH A 604 2.04 REMARK 500 O HOH A 440 O HOH A 631 2.07 REMARK 500 O HOH A 637 O HOH A 671 2.08 REMARK 500 O HOH A 646 O HOH A 674 2.10 REMARK 500 O HOH B 477 O HOH B 520 2.12 REMARK 500 O HOH B 477 O HOH B 488 2.13 REMARK 500 O HOH A 524 O HOH A 623 2.14 REMARK 500 O HOH A 630 O HOH A 649 2.16 REMARK 500 O HOH A 596 O HOH A 620 2.16 REMARK 500 O GLY B 85 NZ LYS B 112 2.17 REMARK 500 O HOH A 443 O HOH A 559 2.17 REMARK 500 O HOH B 463 O HOH B 490 2.17 REMARK 500 O TRP A 95 O HOH A 402 2.18 REMARK 500 OE1 GLU b 259 O HOH b 301 2.18 REMARK 500 CB ASP a 263 ND DAB a 266 2.18 REMARK 500 O HOH A 404 O HOH A 593 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 677 O HOH B 472 3454 1.91 REMARK 500 OE2 GLU A 292 O HOH A 682 7555 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 234 31.13 -82.53 REMARK 500 LYS A 259 -41.97 -136.20 REMARK 500 ASP A 324 -70.12 -108.47 REMARK 500 CYS A 334 -153.06 -121.72 REMARK 500 LYS B 32 132.21 -170.29 REMARK 500 GLU B 80 -64.32 -98.96 REMARK 500 ASP B 107 -9.43 -57.18 REMARK 500 ASP B 108 -13.24 -49.38 REMARK 500 LEU B 234 30.76 -85.47 REMARK 500 CYS B 334 -39.64 -135.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 674 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A 675 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 676 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 677 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A 678 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A 679 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 6.69 ANGSTROMS REMARK 525 HOH A 681 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A 682 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH A 683 DISTANCE = 6.90 ANGSTROMS REMARK 525 HOH A 684 DISTANCE = 7.36 ANGSTROMS REMARK 525 HOH A 685 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH A 686 DISTANCE = 7.60 ANGSTROMS REMARK 525 HOH A 687 DISTANCE = 8.77 ANGSTROMS REMARK 525 HOH A 688 DISTANCE = 8.80 ANGSTROMS REMARK 525 HOH A 689 DISTANCE = 8.85 ANGSTROMS REMARK 525 HOH A 690 DISTANCE = 10.66 ANGSTROMS REMARK 525 HOH A 691 DISTANCE = 10.77 ANGSTROMS REMARK 525 HOH A 692 DISTANCE = 11.78 ANGSTROMS REMARK 525 HOH B 525 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 526 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH B 527 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH B 528 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH B 529 DISTANCE = 8.68 ANGSTROMS REMARK 525 HOH a 309 DISTANCE = 6.01 ANGSTROMS DBREF 8Q1N A 22 334 UNP P61964 WDR5_HUMAN 22 334 DBREF 8Q1N B 22 334 UNP P61964 WDR5_HUMAN 22 334 DBREF 8Q1N a 258 268 PDB 8Q1N 8Q1N 258 268 DBREF 8Q1N b 258 268 PDB 8Q1N 8Q1N 258 268 SEQADV 8Q1N GLY A 335 UNP P61964 EXPRESSION TAG SEQADV 8Q1N THR A 336 UNP P61964 EXPRESSION TAG SEQADV 8Q1N LEU A 337 UNP P61964 EXPRESSION TAG SEQADV 8Q1N GLU A 338 UNP P61964 EXPRESSION TAG SEQADV 8Q1N VAL A 339 UNP P61964 EXPRESSION TAG SEQADV 8Q1N LEU A 340 UNP P61964 EXPRESSION TAG SEQADV 8Q1N PHE A 341 UNP P61964 EXPRESSION TAG SEQADV 8Q1N GLN A 342 UNP P61964 EXPRESSION TAG SEQADV 8Q1N GLY B 335 UNP P61964 EXPRESSION TAG SEQADV 8Q1N THR B 336 UNP P61964 EXPRESSION TAG SEQADV 8Q1N LEU B 337 UNP P61964 EXPRESSION TAG SEQADV 8Q1N GLU B 338 UNP P61964 EXPRESSION TAG SEQADV 8Q1N VAL B 339 UNP P61964 EXPRESSION TAG SEQADV 8Q1N LEU B 340 UNP P61964 EXPRESSION TAG SEQADV 8Q1N PHE B 341 UNP P61964 EXPRESSION TAG SEQADV 8Q1N GLN B 342 UNP P61964 EXPRESSION TAG SEQRES 1 A 321 SER ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN SEQRES 2 A 321 TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA SEQRES 3 A 321 VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU SEQRES 4 A 321 ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY SEQRES 5 A 321 ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS SEQRES 6 A 321 LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER SEQRES 7 A 321 ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS SEQRES 8 A 321 ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU SEQRES 9 A 321 LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN SEQRES 10 A 321 PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SEQRES 11 A 321 SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU SEQRES 12 A 321 LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL SEQRES 13 A 321 HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER SEQRES 14 A 321 TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY SEQRES 15 A 321 GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO SEQRES 16 A 321 VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE SEQRES 17 A 321 LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP SEQRES 18 A 321 TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS SEQRES 19 A 321 LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL SEQRES 20 A 321 THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN SEQRES 21 A 321 LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL SEQRES 22 A 321 GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR SEQRES 23 A 321 ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA SEQRES 24 A 321 LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP SEQRES 25 A 321 CYS GLY THR LEU GLU VAL LEU PHE GLN SEQRES 1 B 321 SER ALA THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN SEQRES 2 B 321 TYR ALA LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA SEQRES 3 B 321 VAL SER SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU SEQRES 4 B 321 ALA SER SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY SEQRES 5 B 321 ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS SEQRES 6 B 321 LYS LEU GLY ILE SER ASP VAL ALA TRP SER SER ASP SER SEQRES 7 B 321 ASN LEU LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS SEQRES 8 B 321 ILE TRP ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU SEQRES 9 B 321 LYS GLY HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN SEQRES 10 B 321 PRO GLN SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SEQRES 11 B 321 SER VAL ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU SEQRES 12 B 321 LYS THR LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL SEQRES 13 B 321 HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SER SER SER SEQRES 14 B 321 TYR ASP GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY SEQRES 15 B 321 GLN CYS LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO SEQRES 16 B 321 VAL SER PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE SEQRES 17 B 321 LEU ALA ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP SEQRES 18 B 321 TYR SER LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS SEQRES 19 B 321 LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL SEQRES 20 B 321 THR GLY GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN SEQRES 21 B 321 LEU VAL TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL SEQRES 22 B 321 GLN LYS LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR SEQRES 23 B 321 ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA SEQRES 24 B 321 LEU GLU ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP SEQRES 25 B 321 CYS GLY THR LEU GLU VAL LEU PHE GLN SEQRES 1 a 11 ASP GLU GLU GLU ILE ASP VAL VAL DAB VAL GLU SEQRES 1 b 11 ASP GLU GLU GLU ILE ASP VAL VAL DAB VAL GLU HET DAB a 266 7 HET DAB b 266 7 HETNAM DAB 2,4-DIAMINOBUTYRIC ACID FORMUL 3 DAB 2(C4 H10 N2 O2) FORMUL 5 HOH *435(H2 O) SHEET 1 AA1 2 LYS A 32 PRO A 33 0 SHEET 2 AA1 2 GLY A 335 THR A 336 -1 O THR A 336 N LYS A 32 SHEET 1 AA2 4 ALA A 36 LEU A 41 0 SHEET 2 AA2 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA2 4 ILE A 315 ALA A 320 -1 N SER A 318 O LYS A 328 SHEET 4 AA2 4 VAL A 304 CYS A 309 -1 N ALA A 308 O ALA A 317 SHEET 1 AA3 4 VAL A 48 PHE A 53 0 SHEET 2 AA3 4 TRP A 59 SER A 64 -1 O SER A 63 N SER A 49 SHEET 3 AA3 4 LEU A 68 GLY A 73 -1 O TRP A 72 N LEU A 60 SHEET 4 AA3 4 PHE A 79 SER A 84 -1 O ILE A 83 N ILE A 69 SHEET 1 AA4 4 ILE A 90 TRP A 95 0 SHEET 2 AA4 4 LEU A 101 SER A 106 -1 O VAL A 103 N ALA A 94 SHEET 3 AA4 4 LEU A 111 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 AA4 4 LYS A 120 LEU A 125 -1 O LEU A 122 N ILE A 113 SHEET 1 AA5 4 VAL A 132 PHE A 137 0 SHEET 2 AA5 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AA5 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 AA5 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 AA6 4 VAL A 174 PHE A 179 0 SHEET 2 AA6 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AA6 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 AA6 4 CYS A 205 LEU A 209 -1 O LEU A 209 N CYS A 195 SHEET 1 AA7 4 VAL A 217 PHE A 222 0 SHEET 2 AA7 4 TYR A 228 THR A 233 -1 O ALA A 232 N PHE A 219 SHEET 3 AA7 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 AA7 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AA8 4 ALA A 264 SER A 267 0 SHEET 2 AA8 4 TRP A 273 SER A 276 -1 O VAL A 275 N ASN A 265 SHEET 3 AA8 4 LEU A 282 ASN A 287 -1 O TRP A 286 N ILE A 274 SHEET 4 AA8 4 ILE A 293 GLN A 298 -1 O VAL A 294 N ILE A 285 SHEET 1 AA9 2 THR B 29 LYS B 32 0 SHEET 2 AA9 2 THR B 336 GLU B 338 -1 O THR B 336 N LYS B 32 SHEET 1 AB1 4 TYR B 35 LEU B 41 0 SHEET 2 AB1 4 ILE B 327 SER B 332 -1 O ILE B 327 N LEU B 41 SHEET 3 AB1 4 ILE B 315 ALA B 320 -1 N ILE B 316 O TRP B 330 SHEET 4 AB1 4 VAL B 304 CYS B 309 -1 N ALA B 308 O ALA B 317 SHEET 1 AB2 4 VAL B 48 PHE B 53 0 SHEET 2 AB2 4 TRP B 59 SER B 64 -1 O SER B 63 N SER B 49 SHEET 3 AB2 4 ILE B 69 GLY B 73 -1 O TRP B 72 N LEU B 60 SHEET 4 AB2 4 PHE B 79 ILE B 83 -1 O ILE B 83 N ILE B 69 SHEET 1 AB3 4 ILE B 90 TRP B 95 0 SHEET 2 AB3 4 LEU B 101 SER B 106 -1 O ALA B 105 N SER B 91 SHEET 3 AB3 4 LEU B 111 ASP B 115 -1 O LYS B 112 N SER B 104 SHEET 4 AB3 4 LYS B 120 LEU B 125 -1 O LEU B 125 N LEU B 111 SHEET 1 AB4 4 VAL B 132 PHE B 137 0 SHEET 2 AB4 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 AB4 4 VAL B 153 ASP B 157 -1 O ARG B 154 N SER B 146 SHEET 4 AB4 4 CYS B 163 LEU B 167 -1 O LEU B 167 N VAL B 153 SHEET 1 AB5 4 VAL B 174 PHE B 179 0 SHEET 2 AB5 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 AB5 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 AB5 4 CYS B 205 LEU B 209 -1 O LYS B 207 N ILE B 197 SHEET 1 AB6 4 VAL B 217 PHE B 222 0 SHEET 2 AB6 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 AB6 4 THR B 237 ASP B 242 -1 O LYS B 239 N ALA B 231 SHEET 4 AB6 4 LYS B 247 TYR B 252 -1 O LYS B 247 N ASP B 242 SHEET 1 AB7 4 ALA B 264 SER B 267 0 SHEET 2 AB7 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 AB7 4 VAL B 283 ASN B 287 -1 O TRP B 286 N ILE B 274 SHEET 4 AB7 4 ILE B 293 LEU B 297 -1 O VAL B 294 N ILE B 285 SSBOND 1 CYS A 334 CYS B 334 1555 6545 2.02 LINK CG ASP a 263 ND DAB a 266 1555 1555 1.43 LINK C VAL a 265 N DAB a 266 1555 1555 1.33 LINK C DAB a 266 N VAL a 267 1555 1555 1.33 LINK CG ASP b 263 ND DAB b 266 1555 1555 1.43 LINK C VAL b 265 N DAB b 266 1555 1555 1.33 LINK C DAB b 266 N VAL b 267 1555 1555 1.33 CRYST1 82.174 82.174 201.707 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012169 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012169 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004958 0.00000