HEADER OXIDOREDUCTASE 10-AUG-23 8Q64 TITLE CRYSTAL STRUCTURE OF HYDROXYLATED HIF2ALPHA-CODD PEPTIDE (523-542) TITLE 2 BOUND TO APO-HIF PROLYL HYDROXYLASE 2 (PHD2 181-407) COMPND MOL_ID: 1; COMPND 2 MOLECULE: EGL NINE HOMOLOG 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HYPOXIA-INDUCIBLE FACTOR PROLYL HYDROXYLASE 2,HIF-PH2,HIF- COMPND 5 PROLYL HYDROXYLASE 2,HPH-2,PROLYL HYDROXYLASE DOMAIN-CONTAINING COMPND 6 PROTEIN 2,PHD2,SM-20; COMPND 7 EC: 1.14.11.29; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: ENDOTHELIAL PAS DOMAIN-CONTAINING PROTEIN 1; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: EPAS-1,BASIC-HELIX-LOOP-HELIX-PAS PROTEIN MOP2,CLASS E BASIC COMPND 13 HELIX-LOOP-HELIX PROTEIN 73,BHLHE73,HIF-1-ALPHA-LIKE FACTOR,HLF, COMPND 14 HYPOXIA-INDUCIBLE FACTOR 2-ALPHA,HIF-2-ALPHA,HIF2-ALPHA,MEMBER OF PAS COMPND 15 PROTEIN 2,PAS DOMAIN-CONTAINING PROTEIN 2; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: SYNTHETIC PEPTIDE SUBSTRATE. HYDROXYLATED PROLINE COMPND 18 (HYP531) OBTAINED FROM OXYGEN EXPOSURE OF CRYSTALS CONTAINING THE NON COMPND 19 HYDROXYLATED EQUIVALENT (P531) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EGLN1, C1ORF12, PNAS-118, PNAS-137; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS 2OG OXYGENASES, OXYGEN SENSOR, JELLY-ROLL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR G.FIORINI,W.D.FIGG JR,C.J.SCHOFIELD REVDAT 1 21-AUG-24 8Q64 0 JRNL AUTH G.FIORINI,W.D.FIGG JR,C.J.SCHOFIELD JRNL TITL HIF PROLYL HYDROXYLASE 2 IN COMPLEX WITH HIF2ALPHA-CODD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.36 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.19.2_4158: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.36 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 46380 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.4700 - 3.4300 1.00 2995 151 0.1558 0.1771 REMARK 3 2 3.4300 - 2.7200 1.00 2816 142 0.1557 0.1889 REMARK 3 3 2.7200 - 2.3800 1.00 2778 158 0.1623 0.1782 REMARK 3 4 2.3800 - 2.1600 1.00 2812 146 0.1617 0.1814 REMARK 3 5 2.1600 - 2.0000 1.00 2740 139 0.1657 0.1985 REMARK 3 6 2.0000 - 1.8900 1.00 2766 151 0.1923 0.2269 REMARK 3 7 1.8900 - 1.7900 1.00 2737 140 0.1922 0.2243 REMARK 3 8 1.7900 - 1.7100 1.00 2756 134 0.2060 0.2339 REMARK 3 9 1.7100 - 1.6500 1.00 2729 140 0.2312 0.2835 REMARK 3 10 1.6500 - 1.5900 1.00 2693 153 0.2547 0.2610 REMARK 3 11 1.5900 - 1.5400 1.00 2738 137 0.2632 0.2634 REMARK 3 12 1.5400 - 1.5000 1.00 2721 138 0.3118 0.3228 REMARK 3 13 1.5000 - 1.4600 1.00 2692 154 0.3162 0.2866 REMARK 3 14 1.4600 - 1.4200 1.00 2708 140 0.3532 0.3752 REMARK 3 15 1.4200 - 1.3900 1.00 2736 135 0.3684 0.3856 REMARK 3 16 1.3900 - 1.3600 0.99 2689 116 0.4005 0.3820 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1991 REMARK 3 ANGLE : 0.870 2709 REMARK 3 CHIRALITY : 0.073 290 REMARK 3 PLANARITY : 0.008 359 REMARK 3 DIHEDRAL : 6.073 287 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 188 THROUGH 215 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7860 -9.3352 -14.1734 REMARK 3 T TENSOR REMARK 3 T11: 0.1355 T22: 0.1703 REMARK 3 T33: 0.1326 T12: 0.0442 REMARK 3 T13: 0.0060 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 3.3245 L22: 3.7929 REMARK 3 L33: 1.2556 L12: 2.3419 REMARK 3 L13: -1.0336 L23: -0.8652 REMARK 3 S TENSOR REMARK 3 S11: 0.0870 S12: 0.0961 S13: 0.2106 REMARK 3 S21: 0.2310 S22: 0.0689 S23: 0.1815 REMARK 3 S31: -0.1274 S32: -0.1605 S33: -0.1543 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 216 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2151 6.0469 -18.4137 REMARK 3 T TENSOR REMARK 3 T11: 0.2068 T22: 0.1493 REMARK 3 T33: 0.2902 T12: -0.0211 REMARK 3 T13: 0.0256 T23: 0.0739 REMARK 3 L TENSOR REMARK 3 L11: 3.3736 L22: 4.7323 REMARK 3 L33: 0.8940 L12: -3.7223 REMARK 3 L13: 0.0903 L23: 0.5859 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: 0.2032 S13: 0.5784 REMARK 3 S21: 0.2117 S22: 0.0611 S23: 0.1121 REMARK 3 S31: -0.1186 S32: 0.0378 S33: -0.0424 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 232 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1973 -8.1183 -14.8501 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.1289 REMARK 3 T33: 0.1185 T12: 0.0024 REMARK 3 T13: -0.0130 T23: 0.0347 REMARK 3 L TENSOR REMARK 3 L11: 2.5318 L22: 1.2176 REMARK 3 L33: 1.9785 L12: -0.1701 REMARK 3 L13: -1.4929 L23: 0.2389 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.0398 S13: 0.0812 REMARK 3 S21: 0.0364 S22: -0.0390 S23: -0.0875 REMARK 3 S31: -0.1086 S32: 0.0801 S33: -0.0416 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9315 -13.4386 -11.1959 REMARK 3 T TENSOR REMARK 3 T11: 0.1025 T22: 0.0375 REMARK 3 T33: 0.1046 T12: 0.0536 REMARK 3 T13: 0.0129 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 5.9713 L22: 2.6922 REMARK 3 L33: 3.7834 L12: 3.2406 REMARK 3 L13: -2.6094 L23: -2.2105 REMARK 3 S TENSOR REMARK 3 S11: 0.0958 S12: -0.2020 S13: -0.1005 REMARK 3 S21: 0.0248 S22: -0.1790 S23: -0.1141 REMARK 3 S31: -0.0694 S32: 0.0345 S33: 0.0608 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.3568 -15.0377 -29.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.2235 REMARK 3 T33: 0.1197 T12: 0.0233 REMARK 3 T13: 0.0001 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 2.5265 L22: 6.6150 REMARK 3 L33: 5.9485 L12: 1.4582 REMARK 3 L13: -2.3068 L23: -3.8893 REMARK 3 S TENSOR REMARK 3 S11: -0.0450 S12: 0.3539 S13: -0.0359 REMARK 3 S21: -0.3705 S22: -0.1345 S23: -0.2005 REMARK 3 S31: 0.1454 S32: 0.2646 S33: 0.0656 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9082 -9.8051 -22.8738 REMARK 3 T TENSOR REMARK 3 T11: 0.0833 T22: 0.1492 REMARK 3 T33: 0.1160 T12: 0.0028 REMARK 3 T13: 0.0076 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.2366 L22: 3.7026 REMARK 3 L33: 3.6322 L12: -0.0225 REMARK 3 L13: 0.2474 L23: -2.2950 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: 0.2673 S13: 0.1210 REMARK 3 S21: -0.0800 S22: 0.0318 S23: 0.0092 REMARK 3 S31: -0.0471 S32: -0.0293 S33: 0.0429 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 343 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0119 -19.5960 -28.5118 REMARK 3 T TENSOR REMARK 3 T11: 0.1317 T22: 0.2819 REMARK 3 T33: 0.1631 T12: 0.0120 REMARK 3 T13: -0.0159 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 8.9195 L22: 4.3758 REMARK 3 L33: 5.9512 L12: 6.0412 REMARK 3 L13: 2.6952 L23: 2.4922 REMARK 3 S TENSOR REMARK 3 S11: 0.0101 S12: 0.2597 S13: -0.4513 REMARK 3 S21: -0.0931 S22: 0.1023 S23: 0.0554 REMARK 3 S31: 0.2715 S32: -0.6211 S33: -0.1320 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 354 THROUGH 369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3163 -9.7778 -21.6687 REMARK 3 T TENSOR REMARK 3 T11: 0.1020 T22: 0.1488 REMARK 3 T33: 0.1276 T12: 0.0254 REMARK 3 T13: 0.0083 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 1.3574 L22: 3.8542 REMARK 3 L33: 1.8683 L12: 0.7252 REMARK 3 L13: -0.5341 L23: -0.2974 REMARK 3 S TENSOR REMARK 3 S11: 0.0495 S12: 0.1960 S13: 0.1597 REMARK 3 S21: 0.0162 S22: -0.0326 S23: 0.0410 REMARK 3 S31: -0.2013 S32: -0.0794 S33: -0.0282 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 370 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5765 -15.8405 -28.0446 REMARK 3 T TENSOR REMARK 3 T11: 0.1089 T22: 0.1996 REMARK 3 T33: 0.1182 T12: 0.0366 REMARK 3 T13: 0.0123 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 4.2021 L22: 7.0057 REMARK 3 L33: 6.6387 L12: 4.1751 REMARK 3 L13: -3.3900 L23: -5.1850 REMARK 3 S TENSOR REMARK 3 S11: -0.1450 S12: 0.5357 S13: -0.1913 REMARK 3 S21: -0.2962 S22: -0.0032 S23: -0.1929 REMARK 3 S31: 0.1813 S32: -0.1057 S33: 0.1255 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 382 THROUGH 406 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5959 -18.1591 -10.3685 REMARK 3 T TENSOR REMARK 3 T11: 0.1133 T22: 0.1139 REMARK 3 T33: 0.1050 T12: -0.0059 REMARK 3 T13: -0.0116 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.1799 L22: 5.7844 REMARK 3 L33: 5.1792 L12: -1.3158 REMARK 3 L13: 1.2524 L23: -4.5480 REMARK 3 S TENSOR REMARK 3 S11: 0.0495 S12: -0.0241 S13: -0.0814 REMARK 3 S21: 0.0855 S22: 0.0243 S23: 0.0129 REMARK 3 S31: 0.1223 S32: 0.0531 S33: -0.0395 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 523 THROUGH 529 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6775 -28.1768 -23.7917 REMARK 3 T TENSOR REMARK 3 T11: 0.2918 T22: 0.1900 REMARK 3 T33: 0.2881 T12: 0.0180 REMARK 3 T13: -0.0134 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 6.7533 L22: 5.3768 REMARK 3 L33: 5.8598 L12: 5.4172 REMARK 3 L13: 0.1534 L23: -2.3336 REMARK 3 S TENSOR REMARK 3 S11: -0.0696 S12: 0.5028 S13: -1.3302 REMARK 3 S21: -0.5831 S22: 0.3285 S23: -0.6654 REMARK 3 S31: 1.3127 S32: 0.1129 S33: -0.3822 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 530 THROUGH 542 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9639 -15.0015 -7.5674 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.2478 REMARK 3 T33: 0.1770 T12: 0.0076 REMARK 3 T13: -0.0143 T23: -0.0343 REMARK 3 L TENSOR REMARK 3 L11: 2.8316 L22: 4.7070 REMARK 3 L33: 5.0121 L12: -3.6460 REMARK 3 L13: -3.6076 L23: 4.7354 REMARK 3 S TENSOR REMARK 3 S11: -0.3043 S12: -0.5040 S13: 0.1869 REMARK 3 S21: 0.4764 S22: 0.4739 S23: -0.2501 REMARK 3 S31: 0.4895 S32: 0.8516 S33: -0.2301 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8Q64 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132655. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46479 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.360 REMARK 200 RESOLUTION RANGE LOW (A) : 43.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.36 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-35% PEG 4K, 0.2 M AMMONIUM ACETATE REMARK 280 AND 0.1 M SODIUM AMMONIUM ACETATE TRIHYDRATE PH (4.1-5.6), VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,-Y,-Z+1/2 REMARK 290 4555 -X+1/2,-Y,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 19.02700 REMARK 290 SMTRY2 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.22850 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 19.02700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 65.22850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 176 REMARK 465 SER A 177 REMARK 465 HIS A 178 REMARK 465 MET A 179 REMARK 465 ALA A 180 REMARK 465 PRO A 181 REMARK 465 ASN A 182 REMARK 465 GLY A 183 REMARK 465 GLN A 184 REMARK 465 THR A 185 REMARK 465 LYS A 186 REMARK 465 PRO A 187 REMARK 465 GLU A 407 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 188 CG CD1 CD2 REMARK 470 LYS A 192 CE NZ REMARK 470 LYS A 216 CE NZ REMARK 470 GLU A 217 CD OE1 OE2 REMARK 470 GLN A 243 CG CD OE1 NE2 REMARK 470 LYS A 244 CG CD CE NZ REMARK 470 LYS A 249 NZ REMARK 470 GLU A 260 CD OE1 OE2 REMARK 470 LYS A 262 NZ REMARK 470 LYS A 332 CD CE NZ REMARK 470 GLU A 348 CD OE1 OE2 REMARK 470 GLN A 352 CG CD OE1 NE2 REMARK 470 LYS A 359 NZ REMARK 470 LYS A 402 CE NZ REMARK 470 GLU B 523 OE1 OE2 REMARK 470 ASP B 536 CG OD1 OD2 REMARK 470 GLU B 538 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 217 N CA C O CB CG REMARK 480 LYS A 286 CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 821 O HOH A 960 2.11 REMARK 500 O ASP B 536 O HOH B 601 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 224 NH2 ARG A 370 1565 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 197 -57.15 -124.34 REMARK 500 LYS A 244 -156.36 -124.92 REMARK 500 LEU A 330 34.39 -141.85 REMARK 500 PHE A 346 71.93 -112.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1013 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A1014 DISTANCE = 6.75 ANGSTROMS DBREF 8Q64 A 181 407 UNP Q9GZT9 EGLN1_HUMAN 181 407 DBREF 8Q64 B 523 542 UNP Q99814 EPAS1_HUMAN 523 542 SEQADV 8Q64 GLY A 176 UNP Q9GZT9 EXPRESSION TAG SEQADV 8Q64 SER A 177 UNP Q9GZT9 EXPRESSION TAG SEQADV 8Q64 HIS A 178 UNP Q9GZT9 EXPRESSION TAG SEQADV 8Q64 MET A 179 UNP Q9GZT9 EXPRESSION TAG SEQADV 8Q64 ALA A 180 UNP Q9GZT9 EXPRESSION TAG SEQRES 1 A 232 GLY SER HIS MET ALA PRO ASN GLY GLN THR LYS PRO LEU SEQRES 2 A 232 PRO ALA LEU LYS LEU ALA LEU GLU TYR ILE VAL PRO CYS SEQRES 3 A 232 MET ASN LYS HIS GLY ILE CYS VAL VAL ASP ASP PHE LEU SEQRES 4 A 232 GLY LYS GLU THR GLY GLN GLN ILE GLY ASP GLU VAL ARG SEQRES 5 A 232 ALA LEU HIS ASP THR GLY LYS PHE THR ASP GLY GLN LEU SEQRES 6 A 232 VAL SER GLN LYS SER ASP SER SER LYS ASP ILE ARG GLY SEQRES 7 A 232 ASP LYS ILE THR TRP ILE GLU GLY LYS GLU PRO GLY CYS SEQRES 8 A 232 GLU THR ILE GLY LEU LEU MET SER SER MET ASP ASP LEU SEQRES 9 A 232 ILE ARG HIS CYS ASN GLY LYS LEU GLY SER TYR LYS ILE SEQRES 10 A 232 ASN GLY ARG THR LYS ALA MET VAL ALA CYS TYR PRO GLY SEQRES 11 A 232 ASN GLY THR GLY TYR VAL ARG HIS VAL ASP ASN PRO ASN SEQRES 12 A 232 GLY ASP GLY ARG CYS VAL THR CYS ILE TYR TYR LEU ASN SEQRES 13 A 232 LYS ASP TRP ASP ALA LYS VAL SER GLY GLY ILE LEU ARG SEQRES 14 A 232 ILE PHE PRO GLU GLY LYS ALA GLN PHE ALA ASP ILE GLU SEQRES 15 A 232 PRO LYS PHE ASP ARG LEU LEU PHE PHE TRP SER ASP ARG SEQRES 16 A 232 ARG ASN PRO HIS GLU VAL GLN PRO ALA TYR ALA THR ARG SEQRES 17 A 232 TYR ALA ILE THR VAL TRP TYR PHE ASP ALA ASP GLU ARG SEQRES 18 A 232 ALA ARG ALA LYS VAL LYS TYR LEU THR GLY GLU SEQRES 1 B 20 GLU LEU ASP LEU GLU THR LEU ALA HYP TYR ILE PRO MET SEQRES 2 B 20 ASP GLY GLU ASP PHE GLN LEU MODRES 8Q64 HYP B 531 PRO MODIFIED RESIDUE HET HYP B 531 12 HET ACT A 701 7 HET ACT A 702 7 HET ACT A 703 7 HET ACT A 704 7 HETNAM HYP 4-HYDROXYPROLINE HETNAM ACT ACETATE ION HETSYN HYP HYDROXYPROLINE FORMUL 2 HYP C5 H9 N O3 FORMUL 3 ACT 4(C2 H3 O2 1-) FORMUL 7 HOH *238(H2 O) HELIX 1 AA1 PRO A 189 TYR A 197 1 9 HELIX 2 AA2 TYR A 197 GLY A 206 1 10 HELIX 3 AA3 GLY A 215 THR A 232 1 18 HELIX 4 AA4 SER A 247 ILE A 251 5 5 HELIX 5 AA5 CYS A 266 CYS A 283 1 18 HELIX 6 AA6 ASP A 335 GLY A 340 1 6 HELIX 7 AA7 ALA A 393 THR A 405 1 13 HELIX 8 AA8 ASP B 525 LEU B 529 5 5 SHEET 1 AA1 7 ILE A 207 VAL A 210 0 SHEET 2 AA1 7 ARG A 362 TRP A 367 -1 O LEU A 363 N VAL A 210 SHEET 3 AA1 7 ARG A 322 TYR A 329 -1 N THR A 325 O PHE A 366 SHEET 4 AA1 7 THR A 382 ASP A 392 -1 O TYR A 390 N CYS A 323 SHEET 5 AA1 7 ALA A 298 PRO A 304 -1 N MET A 299 O THR A 387 SHEET 6 AA1 7 LYS A 255 ILE A 259 -1 N THR A 257 O VAL A 300 SHEET 7 AA1 7 THR A 236 ASP A 237 -1 N THR A 236 O ILE A 256 SHEET 1 AA2 6 ILE A 207 VAL A 210 0 SHEET 2 AA2 6 ARG A 362 TRP A 367 -1 O LEU A 363 N VAL A 210 SHEET 3 AA2 6 ARG A 322 TYR A 329 -1 N THR A 325 O PHE A 366 SHEET 4 AA2 6 THR A 382 ASP A 392 -1 O TYR A 390 N CYS A 323 SHEET 5 AA2 6 ILE A 292 ARG A 295 -1 N GLY A 294 O PHE A 391 SHEET 6 AA2 6 PHE B 540 GLN B 541 -1 O PHE B 540 N ARG A 295 SHEET 1 AA3 4 THR A 308 HIS A 313 0 SHEET 2 AA3 4 HIS A 374 ALA A 379 -1 O HIS A 374 N HIS A 313 SHEET 3 AA3 4 LEU A 343 ILE A 345 -1 N ARG A 344 O GLU A 375 SHEET 4 AA3 4 ALA A 354 ILE A 356 -1 O ILE A 356 N LEU A 343 LINK C ALA B 530 N HYP B 531 1555 1555 1.33 LINK C HYP B 531 N TYR B 532 1555 1555 1.33 CRYST1 38.054 42.467 130.457 90.00 90.00 90.00 P 21 2 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026278 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007665 0.00000