HEADER DE NOVO PROTEIN 22-AUG-23 8QAE TITLE X-RAY CRYSTAL STRUCTURE OF A DE NOVO DESIGNED SINGLE-CHAIN TITLE 2 ANTIPARALLEL 6-HELIX ALPHA-HELICAL BARREL, SC-APCC-6-SLLA COMPND MOL_ID: 1; COMPND 2 MOLECULE: SC-APCC-6-SLLA; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COILED COIL, ALPHA-HELICAL BARREL, DE NOVO PROTEIN DESIGN, DE NOVO KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.I.ALBANESE,R.PETRENAS,D.N.WOOLFSON REVDAT 2 07-AUG-24 8QAE 1 JRNL REVDAT 1 03-JUL-24 8QAE 0 JRNL AUTH K.I.ALBANESE,R.PETRENAS,F.PIRRO,E.A.NAUDIN,U.BORUCU, JRNL AUTH 2 W.M.DAWSON,D.A.SCOTT,G.J.LEGGETT,O.D.WEINER,T.A.A.OLIVER, JRNL AUTH 3 D.N.WOOLFSON JRNL TITL RATIONALLY SEEDED COMPUTATIONAL PROTEIN DESIGN OF JRNL TITL 2 ɑ-HELICAL BARRELS. JRNL REF NAT.CHEM.BIOL. V. 20 991 2024 JRNL REFN ESSN 1552-4469 JRNL PMID 38902458 JRNL DOI 10.1038/S41589-024-01642-0 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 25153 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.360 REMARK 3 FREE R VALUE TEST SET COUNT : 1347 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.4000 - 4.0800 0.99 2462 138 0.2074 0.2347 REMARK 3 2 4.0800 - 3.2500 1.00 2426 102 0.1946 0.1896 REMARK 3 3 3.2500 - 2.8400 1.00 2390 141 0.2114 0.2258 REMARK 3 4 2.8400 - 2.5800 1.00 2343 160 0.2135 0.2651 REMARK 3 5 2.5800 - 2.3900 1.00 2388 131 0.1960 0.2047 REMARK 3 6 2.3900 - 2.2500 1.00 2347 134 0.1891 0.2119 REMARK 3 7 2.2500 - 2.1400 1.00 2368 146 0.1918 0.2174 REMARK 3 8 2.1400 - 2.0500 1.00 2337 142 0.2131 0.2798 REMARK 3 9 2.0500 - 1.9700 1.00 2368 130 0.2367 0.2861 REMARK 3 10 1.9700 - 1.9000 1.00 2377 123 0.2811 0.2684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.219 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.609 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2192 REMARK 3 ANGLE : 0.499 2967 REMARK 3 CHIRALITY : 0.020 379 REMARK 3 PLANARITY : 0.002 351 REMARK 3 DIHEDRAL : 9.517 368 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID -3 THROUGH 212) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2154 0.4162 3.7130 REMARK 3 T TENSOR REMARK 3 T11: 0.1653 T22: 0.2531 REMARK 3 T33: 0.2238 T12: 0.0086 REMARK 3 T13: 0.0691 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 4.0414 L22: 1.6533 REMARK 3 L33: 2.0526 L12: 0.8903 REMARK 3 L13: 0.7167 L23: 0.0379 REMARK 3 S TENSOR REMARK 3 S11: 0.0246 S12: -0.1171 S13: 0.0765 REMARK 3 S21: 0.0002 S22: -0.0800 S23: -0.1006 REMARK 3 S31: -0.1112 S32: 0.0631 S33: 0.0376 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 106 THROUGH 211) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2861 -11.6471 24.4571 REMARK 3 T TENSOR REMARK 3 T11: 0.3728 T22: 0.3478 REMARK 3 T33: 0.1624 T12: 0.0151 REMARK 3 T13: 0.0504 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 3.5084 L22: 1.2150 REMARK 3 L33: 1.9785 L12: -0.4076 REMARK 3 L13: -0.0844 L23: 0.1601 REMARK 3 S TENSOR REMARK 3 S11: 0.3600 S12: 0.3825 S13: 0.0834 REMARK 3 S21: -0.1540 S22: -0.2569 S23: 0.0609 REMARK 3 S31: -0.1660 S32: -0.1304 S33: -0.1490 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QAE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292132824. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25168 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 21.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.08096 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.46440 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CACL2, 0.1 M MES PH 6.0, 20% W/V REMARK 280 PEG 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 63.41150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.08800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 63.41150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.08800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 87.33800 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 59.63498 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 515 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 409 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 428 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 GLY A -20 REMARK 465 SER A -19 REMARK 465 SER A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 GLY A -9 REMARK 465 LEU A -8 REMARK 465 VAL A -7 REMARK 465 PRO A -6 REMARK 465 ARG A -5 REMARK 465 GLY A -4 REMARK 465 THR A 66 REMARK 465 GLU A 67 REMARK 465 THR A 68 REMARK 465 SER A 177 REMARK 465 MET C 14 REMARK 465 GLY C 15 REMARK 465 SER C 16 REMARK 465 SER C 17 REMARK 465 HIS C 18 REMARK 465 HIS C 19 REMARK 465 HIS C 20 REMARK 465 HIS C 21 REMARK 465 HIS C 22 REMARK 465 HIS C 23 REMARK 465 SER C 24 REMARK 465 SER C 25 REMARK 465 GLY C 26 REMARK 465 LEU C 27 REMARK 465 VAL C 28 REMARK 465 PRO C 29 REMARK 465 ARG C 30 REMARK 465 GLY C 31 REMARK 465 SER C 32 REMARK 465 HIS C 33 REMARK 465 MET C 34 REMARK 465 MET C 35 REMARK 465 GLY C 36 REMARK 465 SER C 37 REMARK 465 LEU C 38 REMARK 465 GLU C 39 REMARK 465 GLU C 40 REMARK 465 LEU C 41 REMARK 465 ALA C 42 REMARK 465 GLN C 43 REMARK 465 SER C 44 REMARK 465 LEU C 45 REMARK 465 GLU C 46 REMARK 465 GLU C 47 REMARK 465 LEU C 48 REMARK 465 ALA C 49 REMARK 465 LYS C 50 REMARK 465 SER C 51 REMARK 465 LEU C 52 REMARK 465 LYS C 53 REMARK 465 LYS C 54 REMARK 465 LEU C 55 REMARK 465 ALA C 56 REMARK 465 TRP C 57 REMARK 465 SER C 58 REMARK 465 LEU C 59 REMARK 465 LYS C 60 REMARK 465 LYS C 61 REMARK 465 LEU C 62 REMARK 465 ALA C 63 REMARK 465 GLN C 64 REMARK 465 GLY C 65 REMARK 465 ALA C 66 REMARK 465 GLN C 67 REMARK 465 PRO C 68 REMARK 465 LEU C 69 REMARK 465 GLU C 70 REMARK 465 MET C 71 REMARK 465 SER C 72 REMARK 465 LEU C 73 REMARK 465 GLU C 74 REMARK 465 GLU C 75 REMARK 465 LEU C 76 REMARK 465 ALA C 77 REMARK 465 GLN C 78 REMARK 465 SER C 79 REMARK 465 LEU C 80 REMARK 465 GLU C 81 REMARK 465 GLU C 82 REMARK 465 LEU C 83 REMARK 465 ALA C 84 REMARK 465 LYS C 85 REMARK 465 SER C 86 REMARK 465 LEU C 87 REMARK 465 LYS C 88 REMARK 465 LYS C 89 REMARK 465 LEU C 90 REMARK 465 ALA C 91 REMARK 465 TRP C 92 REMARK 465 SER C 93 REMARK 465 LEU C 94 REMARK 465 LYS C 95 REMARK 465 LYS C 96 REMARK 465 LEU C 97 REMARK 465 ALA C 98 REMARK 465 GLN C 99 REMARK 465 THR C 100 REMARK 465 THR C 101 REMARK 465 GLU C 102 REMARK 465 THR C 103 REMARK 465 LYS C 104 REMARK 465 LYS C 105 REMARK 465 TYR C 137A REMARK 465 GLY C 137B REMARK 465 ASP C 137C REMARK 465 LYS C 137D REMARK 465 ARG C 137E REMARK 465 THR C 137F REMARK 465 SER C 137G REMARK 465 LEU C 137H REMARK 465 GLU C 137I REMARK 465 GLU C 137J REMARK 465 LEU C 137K REMARK 465 ALA C 137L REMARK 465 GLN C 137M REMARK 465 SER C 137N REMARK 465 LEU C 137O REMARK 465 GLU C 137P REMARK 465 GLU C 137Q REMARK 465 LEU C 137R REMARK 465 ALA C 137S REMARK 465 LYS C 137T REMARK 465 SER C 137U REMARK 465 LEU C 137V REMARK 465 LYS C 137W REMARK 465 LYS C 137X REMARK 465 LEU C 137Y REMARK 465 ALA C 137Z REMARK 465 TRP C 138A REMARK 465 SER C 138B REMARK 465 LEU C 138C REMARK 465 LYS C 138D REMARK 465 LYS C 138E REMARK 465 LEU C 138F REMARK 465 ALA C 138G REMARK 465 GLN C 138H REMARK 465 VAL C 138I REMARK 465 ALA C 138J REMARK 465 PRO C 138K REMARK 465 THR C 138L REMARK 465 GLN C 138M REMARK 465 THR C 175 REMARK 465 ASN C 176 REMARK 465 SER C 177 REMARK 465 ASP C 178 REMARK 465 GLY C 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A -3 OG REMARK 470 GLU A 4 CD OE1 OE2 REMARK 470 GLU A 5 CD OE1 OE2 REMARK 470 GLN A 8 CD OE1 NE2 REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 15 CG CD CE NZ REMARK 470 LYS A 18 CD CE NZ REMARK 470 LYS A 25 NZ REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 GLN A 29 CG CD OE1 NE2 REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 MET A 36 CG SD CE REMARK 470 GLU A 39 CG CD OE1 OE2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 GLN A 43 CG CD OE1 NE2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 LYS A 53 CD CE NZ REMARK 470 LYS A 54 CD CE NZ REMARK 470 GLN A 64 CG CD OE1 NE2 REMARK 470 THR A 65 CB OG1 CG2 REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 LYS A 70 CG CD CE NZ REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 ASP A 73 CG OD1 OD2 REMARK 470 GLU A 77 CG CD OE1 OE2 REMARK 470 GLU A 83 OE1 OE2 REMARK 470 GLU A 84 CD OE1 OE2 REMARK 470 LYS A 87 CG CD CE NZ REMARK 470 LYS A 90 NZ REMARK 470 LYS A 91 CG CD CE NZ REMARK 470 LYS A 97 CD CE NZ REMARK 470 GLN A 101 CD OE1 NE2 REMARK 470 GLN A 102 CB CG CD OE1 NE2 REMARK 470 LYS A 106 CG CD CE NZ REMARK 470 ARG A 107 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 111 CG CD OE1 OE2 REMARK 470 GLU A 112 CG CD OE1 OE2 REMARK 470 GLN A 115 CD OE1 NE2 REMARK 470 GLU A 118 OE1 OE2 REMARK 470 GLU A 119 CG CD OE1 OE2 REMARK 470 LYS A 122 CD CE NZ REMARK 470 LYS A 125 CE NZ REMARK 470 LYS A 126 CE NZ REMARK 470 LYS A 132 NZ REMARK 470 GLN A 136 CD OE1 NE2 REMARK 470 THR A 140 OG1 CG2 REMARK 470 GLN A 141 CG CD OE1 NE2 REMARK 470 GLU A 149 CG CD OE1 OE2 REMARK 470 GLN A 152 CD OE1 NE2 REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 162 CE NZ REMARK 470 LYS A 163 CD CE NZ REMARK 470 LYS A 169 NZ REMARK 470 LYS A 170 CD CE NZ REMARK 470 THR A 175 OG1 CG2 REMARK 470 ASN A 176 CG OD1 ND2 REMARK 470 ASP A 178 N CB CG OD1 OD2 REMARK 470 SER A 179 OG REMARK 470 LYS A 182 CD CE NZ REMARK 470 GLU A 186 CD OE1 OE2 REMARK 470 GLU A 187 CD OE1 OE2 REMARK 470 GLN A 190 CG CD OE1 NE2 REMARK 470 GLU A 194 CD OE1 OE2 REMARK 470 LYS A 197 CE NZ REMARK 470 LYS A 200 NZ REMARK 470 LYS A 208 CD CE NZ REMARK 470 GLN A 211 CD OE1 NE2 REMARK 470 GLN C 106 CB CG CD OE1 NE2 REMARK 470 ASP C 108 CB CG OD1 OD2 REMARK 470 GLU C 111 CG CD OE1 OE2 REMARK 470 GLU C 112 CG CD OE1 OE2 REMARK 470 GLN C 115 CG CD OE1 NE2 REMARK 470 GLU C 118 CG CD OE1 OE2 REMARK 470 GLU C 119 CG CD OE1 OE2 REMARK 470 LYS C 122 CG CD CE NZ REMARK 470 LYS C 125 CG CD CE NZ REMARK 470 LYS C 126 CG CD CE NZ REMARK 470 TRP C 129 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 129 CZ3 CH2 REMARK 470 LYS C 132 CG CD CE NZ REMARK 470 LYS C 133 CG CD CE NZ REMARK 470 LEU C 134 CG CD1 CD2 REMARK 470 GLN C 136 CG CD OE1 NE2 REMARK 470 GLN C 137 CG CD OE1 NE2 REMARK 470 ARG C 142 CB CG CD NE CZ NH1 NH2 REMARK 470 HIS C 143 CB CG ND1 CD2 CE1 NE2 REMARK 470 ARG C 144 CB CG CD NE CZ NH1 NH2 REMARK 470 GLU C 148 CD OE1 OE2 REMARK 470 GLU C 149 CG CD OE1 OE2 REMARK 470 GLU C 156 CG CD OE1 OE2 REMARK 470 LYS C 159 CG CD CE NZ REMARK 470 LYS C 162 CD CE NZ REMARK 470 LYS C 163 CD CE NZ REMARK 470 GLN C 173 CG CD OE1 NE2 REMARK 470 SER C 179 N CB OG REMARK 470 LYS C 182 CE NZ REMARK 470 SER C 183 OG REMARK 470 GLU C 186 CG CD OE1 OE2 REMARK 470 GLU C 187 CG CD OE1 OE2 REMARK 470 GLN C 190 CG CD OE1 NE2 REMARK 470 LYS C 197 CG CD CE NZ REMARK 470 LYS C 200 CE NZ REMARK 470 LYS C 201 CE NZ REMARK 470 LYS C 208 CG CD CE NZ REMARK 470 LEU C 209 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 34 45.08 71.47 REMARK 500 SER A 179 -136.28 61.72 REMARK 500 LEU C 134 175.93 -58.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 P5R A 301 DBREF 8QAE A -21 212 PDB 8QAE 8QAE -21 212 DBREF 8QAE C 14 212 PDB 8QAE 8QAE 14 212 SEQRES 1 A 234 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 234 LEU VAL PRO ARG GLY SER HIS MET MET GLY SER LEU GLU SEQRES 3 A 234 GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER LEU SEQRES 4 A 234 LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN GLY SEQRES 5 A 234 ALA GLN PRO LEU GLU MET SER LEU GLU GLU LEU ALA GLN SEQRES 6 A 234 SER LEU GLU GLU LEU ALA LYS SER LEU LYS LYS LEU ALA SEQRES 7 A 234 TRP SER LEU LYS LYS LEU ALA GLN THR THR GLU THR LYS SEQRES 8 A 234 LYS GLN GLY ASP SER LEU GLU GLU LEU ALA GLN SER LEU SEQRES 9 A 234 GLU GLU LEU ALA LYS SER LEU LYS LYS LEU ALA TRP SER SEQRES 10 A 234 LEU LYS LYS LEU ALA GLN GLN TYR GLY ASP LYS ARG THR SEQRES 11 A 234 SER LEU GLU GLU LEU ALA GLN SER LEU GLU GLU LEU ALA SEQRES 12 A 234 LYS SER LEU LYS LYS LEU ALA TRP SER LEU LYS LYS LEU SEQRES 13 A 234 ALA GLN VAL ALA PRO THR GLN ARG HIS ARG TYR SER LEU SEQRES 14 A 234 GLU GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER SEQRES 15 A 234 LEU LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN SEQRES 16 A 234 GLY THR ASN SER ASP SER ASP LEU LYS SER SER LEU GLU SEQRES 17 A 234 GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER LEU SEQRES 18 A 234 LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN GLY SEQRES 1 C 234 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 234 LEU VAL PRO ARG GLY SER HIS MET MET GLY SER LEU GLU SEQRES 3 C 234 GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER LEU SEQRES 4 C 234 LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN GLY SEQRES 5 C 234 ALA GLN PRO LEU GLU MET SER LEU GLU GLU LEU ALA GLN SEQRES 6 C 234 SER LEU GLU GLU LEU ALA LYS SER LEU LYS LYS LEU ALA SEQRES 7 C 234 TRP SER LEU LYS LYS LEU ALA GLN THR THR GLU THR LYS SEQRES 8 C 234 LYS GLN GLY ASP SER LEU GLU GLU LEU ALA GLN SER LEU SEQRES 9 C 234 GLU GLU LEU ALA LYS SER LEU LYS LYS LEU ALA TRP SER SEQRES 10 C 234 LEU LYS LYS LEU ALA GLN GLN TYR GLY ASP LYS ARG THR SEQRES 11 C 234 SER LEU GLU GLU LEU ALA GLN SER LEU GLU GLU LEU ALA SEQRES 12 C 234 LYS SER LEU LYS LYS LEU ALA TRP SER LEU LYS LYS LEU SEQRES 13 C 234 ALA GLN VAL ALA PRO THR GLN ARG HIS ARG TYR SER LEU SEQRES 14 C 234 GLU GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER SEQRES 15 C 234 LEU LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN SEQRES 16 C 234 GLY THR ASN SER ASP SER ASP LEU LYS SER SER LEU GLU SEQRES 17 C 234 GLU LEU ALA GLN SER LEU GLU GLU LEU ALA LYS SER LEU SEQRES 18 C 234 LYS LYS LEU ALA TRP SER LEU LYS LYS LEU ALA GLN GLY HET P5R A 301 72 HET 1PE C 301 38 HETNAM P5R 2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2- HETNAM 2 P5R HYDROXYETHYLOXY) HETNAM 3 P5R ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOX HETNAM 4 P5R Y]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETHOXY]ETH HETNAM 5 P5R ANOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 3 P5R C34 H70 O18 FORMUL 4 1PE C10 H22 O6 FORMUL 5 HOH *149(H2 O) HELIX 1 AA1 SER A -3 ALA A 28 1 32 HELIX 2 AA2 LEU A 34 THR A 65 1 32 HELIX 3 AA3 LYS A 70 GLN A 101 1 32 HELIX 4 AA4 GLN A 102 TYR A 103 5 2 HELIX 5 AA5 GLY A 104 ASP A 105 5 2 HELIX 6 AA6 LYS A 106 GLN A 136 1 31 HELIX 7 AA7 VAL A 137 ARG A 142 5 6 HELIX 8 AA8 HIS A 143 GLY A 174 1 32 HELIX 9 AA9 ASP A 180 GLY A 212 1 33 HELIX 10 AB1 GLY C 107 LEU C 134 1 28 HELIX 11 AB2 HIS C 143 GLY C 174 1 32 HELIX 12 AB3 ASP C 180 GLN C 211 1 32 CRYST1 126.823 42.176 71.522 90.00 123.51 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007885 0.000000 0.005221 0.00000 SCALE2 0.000000 0.023710 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016769 0.00000