HEADER    UNKNOWN FUNCTION                        23-AUG-23   8QAS              
TITLE     CONFORMATIONS OF MACROCYCLIC PEPTIDES SAMPLED BY EXACT NOES: MODELS   
TITLE    2 FOR CELL-PERMEABILITY. NMR STRUCTURE OF OMPHALOTIN A IN METHANOL /   
TITLE    3 WATER INDOLEOUT CONFORMATION.                                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: TRP-MVA-ILE-MVA-MVA-SAR-MVA-IML-SAR-VAL-IML-SAR;           
COMPND   3 CHAIN: Z;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: OMPHALOTUS OLEARIUS;                            
SOURCE   3 ORGANISM_TAXID: 72120;                                               
SOURCE   4 GENE: DSM3398;                                                       
SOURCE   5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS;                            
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 4922;                                       
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: GS115                                      
KEYWDS    CYCLIC PEPTIDE, EXACT NOES, CELL-PERMEABILITY, UNKNOWN FUNCTION       
EXPDTA    SOLUTION NMR                                                          
NUMMDL    19                                                                    
AUTHOR    S.H.RUEDISSER,E.MATABARO,L.SONDEREGGER,P.GUENTERT,M.KUENZLER,         
AUTHOR   2 A.D.GOSSERT                                                          
REVDAT   4   13-NOV-24 8QAS    1       REMARK                                   
REVDAT   3   03-JAN-24 8QAS    1       JRNL                                     
REVDAT   2   20-DEC-23 8QAS    1       JRNL                                     
REVDAT   1   06-DEC-23 8QAS    0                                                
JRNL        AUTH   S.H.RUDISSER,E.MATABARO,L.SONDEREGGER,P.GUNTERT,M.KUNZLER,   
JRNL        AUTH 2 A.D.GOSSERT                                                  
JRNL        TITL   CONFORMATIONS OF MACROCYCLIC PEPTIDES SAMPLED BY NUCLEAR     
JRNL        TITL 2 MAGNETIC RESONANCE: MODELS FOR CELL-PERMEABILITY.            
JRNL        REF    J.AM.CHEM.SOC.                V. 145 27601 2023              
JRNL        REFN                   ESSN 1520-5126                               
JRNL        PMID   38062770                                                     
JRNL        DOI    10.1021/JACS.3C09367                                         
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : AMBER                                                
REMARK   3   AUTHORS     : CASE, DARDEN, CHEATHAM III, SIMMERLING, WANG,        
REMARK   3                 DUKE, LUO, ... AND KOLLMAN                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 8QAS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-23.                  
REMARK 100 THE DEPOSITION ID IS D_1292132886.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 278                                
REMARK 210  PH                             : 7                                  
REMARK 210  IONIC STRENGTH                 : 0                                  
REMARK 210  PRESSURE                       : 1 BAR                              
REMARK 210  SAMPLE CONTENTS                : 20 UM OMPHALOTIN A, METHANOL /     
REMARK 210                                   WATER                              
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-1H NOESY; 2D 1H-1H TOCSY;    
REMARK 210                                   2D 1H-13C HSQC                     
REMARK 210  SPECTROMETER FIELD STRENGTH    : 900 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE III HD                      
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CCPNMR ANALYSIS, CYANA, NMRPIPE    
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 100                                
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 19                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LEAST          
REMARK 210                                   RESTRAINT VIOLATIONS               
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 18                  
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: Z                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 MVA Z   7       75.79   -162.55                                   
REMARK 500  1 IML Z  11     -110.37   -122.79                                   
REMARK 500  2 MVA Z   7       54.76   -140.00                                   
REMARK 500  2 IML Z  11       94.45     77.18                                   
REMARK 500  3 MVA Z   5       72.11     48.93                                   
REMARK 500  3 MVA Z   7       69.13   -153.59                                   
REMARK 500  3 IML Z   8       45.30   -141.22                                   
REMARK 500  3 VAL Z  10       92.25     65.10                                   
REMARK 500  4 MVA Z   4       78.56     53.50                                   
REMARK 500  4 MVA Z   7      -82.54   -106.82                                   
REMARK 500  4 IML Z   8      157.88     69.08                                   
REMARK 500  4 VAL Z  10      144.21     69.05                                   
REMARK 500  4 IML Z  11      116.36     85.89                                   
REMARK 500  5 MVA Z   7      -91.62    -99.87                                   
REMARK 500  5 IML Z   8      126.59     72.76                                   
REMARK 500  5 IML Z  11      128.85     71.17                                   
REMARK 500  6 MVA Z   4       85.74     47.98                                   
REMARK 500  6 IML Z  11       99.80     65.57                                   
REMARK 500  7 IML Z  11      -63.65    123.77                                   
REMARK 500  8 MVA Z   5      -82.91    -68.07                                   
REMARK 500  8 IML Z  11      101.29     68.09                                   
REMARK 500  9 MVA Z   7      -84.06   -149.82                                   
REMARK 500  9 IML Z  11      111.70     69.27                                   
REMARK 500 10 MVA Z   7       69.92   -158.95                                   
REMARK 500 10 IML Z  11      111.40     74.76                                   
REMARK 500 11 MVA Z   4       79.66   -119.60                                   
REMARK 500 11 MVA Z   7      -50.41    114.41                                   
REMARK 500 11 IML Z   8       76.47     60.37                                   
REMARK 500 11 IML Z  11       97.42     71.69                                   
REMARK 500 12 MVA Z   7       91.14     83.63                                   
REMARK 500 12 VAL Z  10       64.78   -155.24                                   
REMARK 500 12 IML Z  11       47.35   -145.60                                   
REMARK 500 14 MVA Z   4      101.69     58.45                                   
REMARK 500 14 IML Z  11       99.00     67.59                                   
REMARK 500 15 IML Z  11       94.13     69.83                                   
REMARK 500 16 MVA Z   4       75.85   -119.13                                   
REMARK 500 16 IML Z  11      120.89     71.87                                   
REMARK 500 18 IML Z  11       95.39     75.80                                   
REMARK 500 19 MVA Z   7       78.72     77.83                                   
REMARK 500 19 IML Z   8      -87.78   -141.44                                   
REMARK 500 19 IML Z  11      102.24     66.88                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 MVA Z    4     MVA Z    5          5       149.87                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 34849   RELATED DB: BMRB                                 
REMARK 900 CONFORMATIONS OF MACROCYCLIC PEPTIDES SAMPLED BY EXACT NOES: MODELS  
REMARK 900 FOR CELL-PERMEABILITY. NMR STRUCTURE OF OMPHALOTIN A IN METHANOL /   
REMARK 900 WATER INDOLEOUT CONFORMATION.                                        
DBREF  8QAS Z    1    12  PDB    8QAS     8QAS             1     12             
SEQRES   1 Z   12  TRP MVA ILE MVA MVA SAR MVA IML SAR VAL IML SAR              
HET    MVA  Z   2      19                                                       
HET    MVA  Z   4      19                                                       
HET    MVA  Z   5      19                                                       
HET    SAR  Z   6      10                                                       
HET    MVA  Z   7      19                                                       
HET    IML  Z   8      22                                                       
HET    SAR  Z   9      10                                                       
HET    IML  Z  11      22                                                       
HET    SAR  Z  12      10                                                       
HETNAM     MVA N-METHYLVALINE                                                   
HETNAM     SAR SARCOSINE                                                        
HETNAM     IML N-METHYL-ISOLEUCINE                                              
FORMUL   1  MVA    4(C6 H13 N O2)                                               
FORMUL   1  SAR    3(C3 H7 N O2)                                                
FORMUL   1  IML    2(C7 H15 N O2)                                               
LINK         C   TRP Z   1                 N   MVA Z   2     1555   1555  1.39  
LINK         N   TRP Z   1                 C   SAR Z  12     1555   1555  1.33  
LINK         C   MVA Z   2                 N   ILE Z   3     1555   1555  1.33  
LINK         C   ILE Z   3                 N   MVA Z   4     1555   1555  1.39  
LINK         C   MVA Z   4                 N   MVA Z   5     1555   1555  1.40  
LINK         C   MVA Z   5                 N   SAR Z   6     1555   1555  1.40  
LINK         C   SAR Z   6                 N   MVA Z   7     1555   1555  1.38  
LINK         C   MVA Z   7                 N   IML Z   8     1555   1555  1.41  
LINK         C   IML Z   8                 N   SAR Z   9     1555   1555  1.40  
LINK         C   SAR Z   9                 N   VAL Z  10     1555   1555  1.34  
LINK         C   VAL Z  10                 N   IML Z  11     1555   1555  1.40  
LINK         C   IML Z  11                 N   SAR Z  12     1555   1555  1.41  
CISPEP   1 TRP Z    1    MVA Z    2          1        -8.35                     
CISPEP   2 MVA Z    7    IML Z    8          1         2.11                     
CISPEP   3 IML Z   11    SAR Z   12          1         1.41                     
CISPEP   4 TRP Z    1    MVA Z    2          2        -5.71                     
CISPEP   5 TRP Z    1    MVA Z    2          3        -0.52                     
CISPEP   6 TRP Z    1    MVA Z    2          4         0.80                     
CISPEP   7 SAR Z    6    MVA Z    7          4        -6.86                     
CISPEP   8 IML Z    8    SAR Z    9          4        -1.22                     
CISPEP   9 TRP Z    1    MVA Z    2          5         1.68                     
CISPEP  10 SAR Z    6    MVA Z    7          5        -3.22                     
CISPEP  11 IML Z   11    SAR Z   12          5         4.53                     
CISPEP  12 TRP Z    1    MVA Z    2          6        -5.07                     
CISPEP  13 SAR Z    6    MVA Z    7          6        -8.39                     
CISPEP  14 TRP Z    1    MVA Z    2          7         1.26                     
CISPEP  15 IML Z    8    SAR Z    9          7        -0.33                     
CISPEP  16 IML Z   11    SAR Z   12          7         2.97                     
CISPEP  17 TRP Z    1    MVA Z    2          8         0.34                     
CISPEP  18 SAR Z    6    MVA Z    7          8        -6.82                     
CISPEP  19 TRP Z    1    MVA Z    2          9        -6.60                     
CISPEP  20 MVA Z    5    SAR Z    6          9        -8.91                     
CISPEP  21 MVA Z    7    IML Z    8          9        -3.07                     
CISPEP  22 TRP Z    1    MVA Z    2         10         2.05                     
CISPEP  23 TRP Z    1    MVA Z    2         11        -6.91                     
CISPEP  24 IML Z    8    SAR Z    9         11        -1.73                     
CISPEP  25 TRP Z    1    MVA Z    2         12         0.15                     
CISPEP  26 MVA Z    7    IML Z    8         12         9.38                     
CISPEP  27 TRP Z    1    MVA Z    2         13         0.62                     
CISPEP  28 TRP Z    1    MVA Z    2         14         2.54                     
CISPEP  29 MVA Z    5    SAR Z    6         14         2.64                     
CISPEP  30 SAR Z    6    MVA Z    7         14        -0.65                     
CISPEP  31 TRP Z    1    MVA Z    2         15        -6.28                     
CISPEP  32 TRP Z    1    MVA Z    2         16        -6.81                     
CISPEP  33 IML Z    8    SAR Z    9         16         1.25                     
CISPEP  34 TRP Z    1    MVA Z    2         17         1.62                     
CISPEP  35 TRP Z    1    MVA Z    2         18        -6.05                     
CISPEP  36 TRP Z    1    MVA Z    2         19        -5.62                     
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1