HEADER HYDROLASE 25-AUG-23 8QCE TITLE DISPERSIN FROM LACTIPLANTIBACILLUS PARAPLANTARUM DISPLP COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYL-BETA-HEXOSAMINIDASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTIPLANTIBACILLUS PARAPLANTARUM; SOURCE 3 ORGANISM_TAXID: 60520; SOURCE 4 GENE: DQM08_04690; SOURCE 5 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1423 KEYWDS BIOFILM DEGRADATION, GH20, POLY-N-ACETYLGLUCOSAMINE, ENZYME KEYWDS 2 CATALYSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.MALES,O.V.MOROZ,E.BLAGOVA,A.MUNCH,G.H.HANSEN,A.H.JOHANSEN, AUTHOR 2 L.H.OSTERGAARD,D.R.SEGURA,A.EDDENDEN,A.V.DUE,M.GUDMAND,J.SALOMON, AUTHOR 3 S.R.SORENSEN,J.L.F.CAIRO,R.A.PACHE,R.M.VEJBORG,G.J.DAVIES,K.S.WILSON REVDAT 2 19-MAR-25 8QCE 1 JRNL REVDAT 1 12-MAR-25 8QCE 0 JRNL AUTH A.MALES,O.V.MOROZ,E.BLAGOVA,A.MUNCH,G.H.HANSEN,A.H.JOHANSEN, JRNL AUTH 2 L.H.OSTERGAARD,D.R.SEGURA,A.EDDENDEN,A.V.DUE,M.GUDMAND, JRNL AUTH 3 J.SALOMON,S.R.SORENSEN,J.P.L.FRANCO CAIRO,M.NITZ,R.A.PACHE, JRNL AUTH 4 R.M.VEJBORG,S.BHOSALE,D.J.VOCADLO,G.J.DAVIES,K.S.WILSON JRNL TITL EXPANSION OF THE DIVERSITY OF DISPERSIN SCAFFOLDS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 81 130 2025 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 40019001 JRNL DOI 10.1107/S205979832500110X REMARK 2 REMARK 2 RESOLUTION. 1.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 3 NUMBER OF REFLECTIONS : 256370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.170 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.954 REMARK 3 FREE R VALUE TEST SET COUNT : 12700 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8432 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 42.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.3300 REMARK 3 BIN FREE R VALUE SET COUNT : 443 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5240 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 51 REMARK 3 SOLVENT ATOMS : 772 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.30300 REMARK 3 B22 (A**2) : 0.82400 REMARK 3 B33 (A**2) : -2.07100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.09800 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.030 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.030 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.034 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.672 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.981 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.977 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5746 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5185 ; 0.003 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7881 ; 1.734 ; 1.656 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11919 ; 0.688 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 724 ; 6.637 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 22 ; 9.105 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 882 ;12.357 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 908 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6974 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1346 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1118 ; 0.235 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 81 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2717 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 581 ; 0.126 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2848 ; 3.747 ; 1.332 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2848 ; 3.736 ; 1.332 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3588 ; 5.239 ; 2.400 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3589 ; 5.242 ; 2.400 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2898 ;18.057 ; 1.549 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2899 ;18.054 ; 1.550 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 4293 ;16.871 ; 2.751 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4294 ;16.871 ; 2.752 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 10931 ; 5.912 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A -1 A 330 NULL REMARK 3 1 A -1 A 330 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8QCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-AUG-23. REMARK 100 THE DEPOSITION ID IS D_1292133014. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 256432 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.050 REMARK 200 RESOLUTION RANGE LOW (A) : 38.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 5.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 38.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.06300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM CHLORIDE, 0.1 M SODIUM REMARK 280 ACETATE PH 5.0, 20% PEG 6000 (PACT A10), MMS FROM HAMPTON D10, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.39600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 0 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 559 O HOH A 837 1455 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 108 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 TYR A 135 CB - CG - CD1 ANGL. DEV. = 3.7 DEGREES REMARK 500 ARG A 224 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 LEU B 85 CB - CG - CD2 ANGL. DEV. = 10.4 DEGREES REMARK 500 ARG B 224 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 46 -154.58 -157.52 REMARK 500 ASN A 245 118.17 -36.51 REMARK 500 TRP A 290 67.99 -116.16 REMARK 500 ASP B 46 -153.69 -154.72 REMARK 500 ASN B 245 115.91 -38.02 REMARK 500 PRO B 275 -9.58 -53.81 REMARK 500 TRP B 290 64.40 -115.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 224 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF1 8QCE A 1 331 UNP A0A370AE65_9LACO DBREF2 8QCE A A0A370AE65 31 361 DBREF1 8QCE B 1 331 UNP A0A370AE65_9LACO DBREF2 8QCE B A0A370AE65 31 361 SEQADV 8QCE HIS A -4 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE HIS A -3 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE HIS A -2 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE PRO A -1 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE ARG A 0 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE SER A 45 UNP A0A370AE6 ALA 75 CONFLICT SEQADV 8QCE ALA A 60 UNP A0A370AE6 THR 90 CONFLICT SEQADV 8QCE ASN A 79 UNP A0A370AE6 ASP 109 CONFLICT SEQADV 8QCE ILE A 128 UNP A0A370AE6 VAL 158 CONFLICT SEQADV 8QCE HIS A 181 UNP A0A370AE6 ASN 211 CONFLICT SEQADV 8QCE THR A 198 UNP A0A370AE6 ASN 228 CONFLICT SEQADV 8QCE VAL A 218 UNP A0A370AE6 ALA 248 CONFLICT SEQADV 8QCE VAL A 229 UNP A0A370AE6 ALA 259 CONFLICT SEQADV 8QCE HIS B -4 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE HIS B -3 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE HIS B -2 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE PRO B -1 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE ARG B 0 UNP A0A370AE6 EXPRESSION TAG SEQADV 8QCE SER B 45 UNP A0A370AE6 ALA 75 CONFLICT SEQADV 8QCE ALA B 60 UNP A0A370AE6 THR 90 CONFLICT SEQADV 8QCE ASN B 79 UNP A0A370AE6 ASP 109 CONFLICT SEQADV 8QCE ILE B 128 UNP A0A370AE6 VAL 158 CONFLICT SEQADV 8QCE HIS B 181 UNP A0A370AE6 ASN 211 CONFLICT SEQADV 8QCE THR B 198 UNP A0A370AE6 ASN 228 CONFLICT SEQADV 8QCE VAL B 218 UNP A0A370AE6 ALA 248 CONFLICT SEQADV 8QCE VAL B 229 UNP A0A370AE6 ALA 259 CONFLICT SEQRES 1 A 336 HIS HIS HIS PRO ARG ASN SER SER THR LEU ASN THR SER SEQRES 2 A 336 GLN GLY VAL MET LEU ASP LEU GLY ARG HIS PRO LEU ASP SEQRES 3 A 336 GLU THR ALA ILE LYS ALA VAL ILE SER ALA ALA ALA GLU SEQRES 4 A 336 GLN HIS MET GLN TYR VAL GLU LEU HIS LEU SER ASP ASN SEQRES 5 A 336 GLU HIS LEU CYS PHE GLN SER ALA TYR LEU GLY ASN ALA SEQRES 6 A 336 ALA SER ALA THR VAL LEU SER ALA THR THR LEU GLU GLN SEQRES 7 A 336 LEU VAL ALA TYR ALA ASN GLN LEU ASN ILE GLU LEU VAL SEQRES 8 A 336 PRO ASP VAL ASP LEU PRO SER HIS ALA GLY ALA ILE LEU SEQRES 9 A 336 ARG GLN LEU GLN GLN THR HIS PRO ASP ILE TYR ASN THR SEQRES 10 A 336 VAL LYS LEU ASP ASP GLU THR ILE ASP TYR THR LYS PRO SEQRES 11 A 336 ALA ALA ILE SER LEU ALA THR THR LEU TYR GLY GLU LEU SEQRES 12 A 336 ASP ALA SER PHE ASN ASN GLN SER GLN HIS ASP LEU MET SEQRES 13 A 336 LEU GLY ALA ASP GLU VAL PRO GLY SER ALA SER ALA TYR SEQRES 14 A 336 ILE GLU LEU THR THR PHE ILE ASN GLN VAL SER ARG PHE SEQRES 15 A 336 GLN ASN GLN HIS GLY PHE ASN THR SER ILE TRP ASN ASP SEQRES 16 A 336 SER LEU LEU LYS ASN GLU LEU THR ARG LEU ASP SER ASN SEQRES 17 A 336 ILE THR ILE ASN TYR TRP SER GLN SER GLY ASN ASN THR SEQRES 18 A 336 ASP VAL ALA ILE ILE ALA ASP ARG TYR ALA ASN ARG VAL SEQRES 19 A 336 SER VAL PRO ASP ILE LEU ALA SER GLY HIS PRO ILE VAL SEQRES 20 A 336 ASN CYS ASN SER TYR ALA THR TYR TYR GLN ILE LYS ASN SEQRES 21 A 336 ILE GLY ASN VAL ASN ASP ASP ASP TYR PHE ILE ASN TYR SEQRES 22 A 336 LEU ASN HIS THR PHE ARG PRO ASN ILE PHE ASN GLU ILE SEQRES 23 A 336 ASP THR ASN GLY HIS ASN GLN ASP TRP THR ILE GLU ASP SEQRES 24 A 336 GLY VAL THR THR ASN GLY ILE LEU VAL SER LEU TRP GLY SEQRES 25 A 336 ALA ASP SER GLU HIS VAL THR PRO THR ALA ILE VAL ASN SEQRES 26 A 336 PHE ILE LYS ARG MET THR ILE PRO ARG SER PHE SEQRES 1 B 336 HIS HIS HIS PRO ARG ASN SER SER THR LEU ASN THR SER SEQRES 2 B 336 GLN GLY VAL MET LEU ASP LEU GLY ARG HIS PRO LEU ASP SEQRES 3 B 336 GLU THR ALA ILE LYS ALA VAL ILE SER ALA ALA ALA GLU SEQRES 4 B 336 GLN HIS MET GLN TYR VAL GLU LEU HIS LEU SER ASP ASN SEQRES 5 B 336 GLU HIS LEU CYS PHE GLN SER ALA TYR LEU GLY ASN ALA SEQRES 6 B 336 ALA SER ALA THR VAL LEU SER ALA THR THR LEU GLU GLN SEQRES 7 B 336 LEU VAL ALA TYR ALA ASN GLN LEU ASN ILE GLU LEU VAL SEQRES 8 B 336 PRO ASP VAL ASP LEU PRO SER HIS ALA GLY ALA ILE LEU SEQRES 9 B 336 ARG GLN LEU GLN GLN THR HIS PRO ASP ILE TYR ASN THR SEQRES 10 B 336 VAL LYS LEU ASP ASP GLU THR ILE ASP TYR THR LYS PRO SEQRES 11 B 336 ALA ALA ILE SER LEU ALA THR THR LEU TYR GLY GLU LEU SEQRES 12 B 336 ASP ALA SER PHE ASN ASN GLN SER GLN HIS ASP LEU MET SEQRES 13 B 336 LEU GLY ALA ASP GLU VAL PRO GLY SER ALA SER ALA TYR SEQRES 14 B 336 ILE GLU LEU THR THR PHE ILE ASN GLN VAL SER ARG PHE SEQRES 15 B 336 GLN ASN GLN HIS GLY PHE ASN THR SER ILE TRP ASN ASP SEQRES 16 B 336 SER LEU LEU LYS ASN GLU LEU THR ARG LEU ASP SER ASN SEQRES 17 B 336 ILE THR ILE ASN TYR TRP SER GLN SER GLY ASN ASN THR SEQRES 18 B 336 ASP VAL ALA ILE ILE ALA ASP ARG TYR ALA ASN ARG VAL SEQRES 19 B 336 SER VAL PRO ASP ILE LEU ALA SER GLY HIS PRO ILE VAL SEQRES 20 B 336 ASN CYS ASN SER TYR ALA THR TYR TYR GLN ILE LYS ASN SEQRES 21 B 336 ILE GLY ASN VAL ASN ASP ASP ASP TYR PHE ILE ASN TYR SEQRES 22 B 336 LEU ASN HIS THR PHE ARG PRO ASN ILE PHE ASN GLU ILE SEQRES 23 B 336 ASP THR ASN GLY HIS ASN GLN ASP TRP THR ILE GLU ASP SEQRES 24 B 336 GLY VAL THR THR ASN GLY ILE LEU VAL SER LEU TRP GLY SEQRES 25 B 336 ALA ASP SER GLU HIS VAL THR PRO THR ALA ILE VAL ASN SEQRES 26 B 336 PHE ILE LYS ARG MET THR ILE PRO ARG SER PHE HET GC2 A 401 34 HET EDO A 402 10 HET EDO A 403 10 HET GC2 B 401 34 HET EDO B 402 10 HET PEG B 403 17 HETNAM GC2 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN GC2 N-[(1S,6S,7R,8R,8AR)-1,7,8- HETSYN 2 GC2 TRIHYDROXYOCTAHYDROINDOLIZIN-6-YL]ACETAMIDE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 GC2 2(C10 H18 N2 O4) FORMUL 4 EDO 3(C2 H6 O2) FORMUL 8 PEG C4 H10 O3 FORMUL 9 HOH *772(H2 O) HELIX 1 AA1 THR A 4 THR A 7 5 4 HELIX 2 AA2 ASP A 21 GLN A 35 1 15 HELIX 3 AA3 SER A 67 LEU A 81 1 15 HELIX 4 AA4 ALA A 95 HIS A 106 1 12 HELIX 5 AA5 HIS A 106 VAL A 113 1 8 HELIX 6 AA6 LYS A 124 PHE A 142 1 19 HELIX 7 AA7 SER A 160 HIS A 181 1 22 HELIX 8 AA8 LEU A 193 LEU A 200 5 8 HELIX 9 AA9 ASP A 217 ARG A 228 1 12 HELIX 10 AB1 SER A 230 GLY A 238 1 9 HELIX 11 AB2 LYS A 254 ILE A 256 5 3 HELIX 12 AB3 ASN A 258 THR A 272 1 15 HELIX 13 AB4 THR A 314 LYS A 323 1 10 HELIX 14 AB5 THR B 4 THR B 7 5 4 HELIX 15 AB6 ASP B 21 GLN B 35 1 15 HELIX 16 AB7 SER B 67 LEU B 81 1 15 HELIX 17 AB8 ALA B 95 HIS B 106 1 12 HELIX 18 AB9 HIS B 106 VAL B 113 1 8 HELIX 19 AC1 LYS B 124 PHE B 142 1 19 HELIX 20 AC2 SER B 160 HIS B 181 1 22 HELIX 21 AC3 LEU B 193 LEU B 200 5 8 HELIX 22 AC4 ASP B 217 ARG B 228 1 12 HELIX 23 AC5 SER B 230 GLY B 238 1 9 HELIX 24 AC6 LYS B 254 ILE B 256 5 3 HELIX 25 AC7 ASN B 258 THR B 272 1 15 HELIX 26 AC8 THR B 314 LYS B 323 1 10 SHEET 1 AA110 TYR A 250 GLN A 252 0 SHEET 2 AA110 ILE A 301 TRP A 306 1 O SER A 304 N TYR A 251 SHEET 3 AA110 ILE A 241 ASN A 243 1 N ASN A 243 O LEU A 302 SHEET 4 AA110 THR A 205 TYR A 208 1 N TYR A 208 O VAL A 242 SHEET 5 AA110 ASN A 184 TRP A 188 1 N ILE A 187 O ASN A 207 SHEET 6 AA110 ASP A 149 GLY A 153 1 N GLY A 153 O TRP A 188 SHEET 7 AA110 GLU A 84 LEU A 91 1 N PRO A 87 O MET A 151 SHEET 8 AA110 TYR A 39 SER A 45 1 N VAL A 40 O VAL A 86 SHEET 9 AA110 GLN A 9 ASP A 14 1 N VAL A 11 O GLU A 41 SHEET 10 AA110 ILE A 301 TRP A 306 1 O VAL A 303 N MET A 12 SHEET 1 AA2 2 LYS A 114 ASP A 116 0 SHEET 2 AA2 2 THR A 119 ILE A 120 -1 O THR A 119 N LEU A 115 SHEET 1 AA3 2 ILE A 277 ILE A 281 0 SHEET 2 AA3 2 ASN A 287 ILE A 292 -1 O THR A 291 N PHE A 278 SHEET 1 AA410 TYR B 250 GLN B 252 0 SHEET 2 AA410 ILE B 301 TRP B 306 1 O SER B 304 N TYR B 251 SHEET 3 AA410 ILE B 241 ASN B 243 1 N ASN B 243 O LEU B 302 SHEET 4 AA410 THR B 205 TYR B 208 1 N TYR B 208 O VAL B 242 SHEET 5 AA410 ASN B 184 TRP B 188 1 N ILE B 187 O ASN B 207 SHEET 6 AA410 ASP B 149 GLY B 153 1 N GLY B 153 O TRP B 188 SHEET 7 AA410 GLU B 84 LEU B 91 1 N PRO B 87 O MET B 151 SHEET 8 AA410 TYR B 39 SER B 45 1 N VAL B 40 O VAL B 86 SHEET 9 AA410 GLN B 9 ASP B 14 1 N VAL B 11 O GLU B 41 SHEET 10 AA410 ILE B 301 TRP B 306 1 O VAL B 303 N MET B 12 SHEET 1 AA5 2 LYS B 114 ASP B 116 0 SHEET 2 AA5 2 THR B 119 ILE B 120 -1 O THR B 119 N LEU B 115 SHEET 1 AA6 2 ILE B 277 ILE B 281 0 SHEET 2 AA6 2 ASN B 287 ILE B 292 -1 O THR B 291 N PHE B 278 CISPEP 1 LEU A 91 PRO A 92 0 -4.79 CISPEP 2 LEU B 91 PRO B 92 0 -2.13 CRYST1 46.902 82.792 80.642 90.00 98.12 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021321 0.000000 0.003040 0.00000 SCALE2 0.000000 0.012078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012526 0.00000