HEADER CHAPERONE 06-SEP-23 8QH6 TITLE CRYSTAL STRUCTURE OF IPGC IN COMPLEX WITH A FOLLOW-UP COMPOUND BASED TITLE 2 ON J20 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHAPERONE PROTEIN IPGC; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: TRUNCATED IPGC (IPGC10-151) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA FLEXNERI; SOURCE 3 ORGANISM_TAXID: 623; SOURCE 4 GENE: IPGC, IPPI, CP0129; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, 3-AMINO-6-CHLORO-1H-ISOINDOL-1-ONE, CHAPERONE EXPDTA X-RAY DIFFRACTION AUTHOR J.E.WALLBAUM,A.HEINE,K.REUTER REVDAT 1 27-DEC-23 8QH6 0 JRNL AUTH M.GARDONYI,C.HASEWINKEL,J.WALLBAUM,J.WOLLENHAUPT,M.S.WEISS, JRNL AUTH 2 G.KLEBE,K.REUTER,A.HEINE JRNL TITL CRYSTALLOGRAPHIC FRAGMENT SCREENING ON THE SHIGELLA TYPE III JRNL TITL 2 SECRETION SYSTEM CHAPERONE IPGC. JRNL REF ACS OMEGA V. 8 46051 2023 JRNL REFN ESSN 2470-1343 JRNL PMID 38075755 JRNL DOI 10.1021/ACSOMEGA.3C07058 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 29461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1471 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4400 - 4.0000 1.00 2742 144 0.1630 0.1946 REMARK 3 2 4.0000 - 3.1700 1.00 2611 138 0.1560 0.1699 REMARK 3 3 3.1700 - 2.7700 1.00 2552 134 0.1825 0.2040 REMARK 3 4 2.7700 - 2.5200 1.00 2567 135 0.1873 0.2223 REMARK 3 5 2.5200 - 2.3400 1.00 2545 134 0.1788 0.2299 REMARK 3 6 2.3400 - 2.2000 1.00 2524 132 0.1724 0.2485 REMARK 3 7 2.2000 - 2.0900 1.00 2521 132 0.1665 0.2211 REMARK 3 8 2.0900 - 2.0000 1.00 2480 130 0.1934 0.2355 REMARK 3 9 2.0000 - 1.9200 1.00 2493 131 0.1952 0.2378 REMARK 3 10 1.9200 - 1.8600 1.00 2517 133 0.2092 0.3002 REMARK 3 11 1.8600 - 1.8000 0.97 2438 128 0.2160 0.2459 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.07 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2340 REMARK 3 ANGLE : 0.772 3191 REMARK 3 CHIRALITY : 0.050 341 REMARK 3 PLANARITY : 0.006 429 REMARK 3 DIHEDRAL : 13.061 854 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5815 41.1566 24.7377 REMARK 3 T TENSOR REMARK 3 T11: 0.4273 T22: 0.5895 REMARK 3 T33: 0.5275 T12: 0.1467 REMARK 3 T13: -0.1212 T23: -0.1000 REMARK 3 L TENSOR REMARK 3 L11: 8.5022 L22: 9.1955 REMARK 3 L33: 4.6430 L12: -3.4206 REMARK 3 L13: 5.3803 L23: -0.9325 REMARK 3 S TENSOR REMARK 3 S11: -0.1366 S12: -0.4194 S13: 0.2707 REMARK 3 S21: -0.9293 S22: -0.2970 S23: 1.8755 REMARK 3 S31: -0.7392 S32: -1.8457 S33: 0.3209 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 39 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8330 41.6943 20.7072 REMARK 3 T TENSOR REMARK 3 T11: 0.3979 T22: 0.3381 REMARK 3 T33: 0.2737 T12: 0.0366 REMARK 3 T13: -0.0582 T23: -0.0306 REMARK 3 L TENSOR REMARK 3 L11: 2.0753 L22: 7.5718 REMARK 3 L33: 7.9099 L12: -3.4746 REMARK 3 L13: 0.6002 L23: -3.9679 REMARK 3 S TENSOR REMARK 3 S11: -0.0512 S12: -0.5435 S13: 0.5740 REMARK 3 S21: 0.1874 S22: -0.1399 S23: -0.1049 REMARK 3 S31: -1.2258 S32: -0.2443 S33: 0.1987 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 40 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1251 29.8180 18.8071 REMARK 3 T TENSOR REMARK 3 T11: 0.1784 T22: 0.3414 REMARK 3 T33: 0.2321 T12: -0.0384 REMARK 3 T13: 0.0084 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 7.8198 L22: 8.0460 REMARK 3 L33: 8.5646 L12: -6.8760 REMARK 3 L13: 6.0543 L23: -6.3961 REMARK 3 S TENSOR REMARK 3 S11: 0.0649 S12: 0.4674 S13: 0.2965 REMARK 3 S21: 0.0406 S22: -0.3577 S23: -0.2102 REMARK 3 S31: -0.2924 S32: 0.7138 S33: 0.2500 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4318 29.9335 19.4769 REMARK 3 T TENSOR REMARK 3 T11: 0.1222 T22: 0.1842 REMARK 3 T33: 0.1632 T12: -0.0022 REMARK 3 T13: -0.0150 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 1.6634 L22: 1.9642 REMARK 3 L33: 5.9780 L12: 1.5343 REMARK 3 L13: 1.7076 L23: 1.2154 REMARK 3 S TENSOR REMARK 3 S11: -0.0971 S12: 0.0279 S13: 0.1681 REMARK 3 S21: -0.0565 S22: -0.0388 S23: 0.0841 REMARK 3 S31: -0.1783 S32: -0.1009 S33: 0.1287 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9142 17.4568 17.2336 REMARK 3 T TENSOR REMARK 3 T11: 0.2442 T22: 0.2927 REMARK 3 T33: 0.2229 T12: 0.0842 REMARK 3 T13: -0.0422 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 8.9832 L22: 1.8761 REMARK 3 L33: 6.7776 L12: -3.5559 REMARK 3 L13: -1.9167 L23: 2.4850 REMARK 3 S TENSOR REMARK 3 S11: -0.2275 S12: -0.8253 S13: -0.0896 REMARK 3 S21: 0.6211 S22: 0.3896 S23: -0.4556 REMARK 3 S31: 0.5292 S32: 0.9963 S33: -0.1176 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3028 14.6147 15.2061 REMARK 3 T TENSOR REMARK 3 T11: 0.2407 T22: 0.3262 REMARK 3 T33: 0.3345 T12: 0.0282 REMARK 3 T13: 0.0131 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 5.9491 L22: 4.8479 REMARK 3 L33: 9.6365 L12: -5.3605 REMARK 3 L13: -7.4672 L23: 6.7456 REMARK 3 S TENSOR REMARK 3 S11: -0.3409 S12: -0.0238 S13: -1.1932 REMARK 3 S21: 0.2154 S22: 0.0490 S23: 0.2246 REMARK 3 S31: 0.7788 S32: 0.3670 S33: 0.2553 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1785 19.2045 7.0841 REMARK 3 T TENSOR REMARK 3 T11: 0.1099 T22: 0.2731 REMARK 3 T33: 0.1997 T12: -0.0054 REMARK 3 T13: -0.0125 T23: -0.0326 REMARK 3 L TENSOR REMARK 3 L11: 1.2667 L22: 3.6423 REMARK 3 L33: 3.2677 L12: -0.2408 REMARK 3 L13: -0.9751 L23: -0.2918 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: 0.1485 S13: -0.0832 REMARK 3 S21: -0.0876 S22: -0.0165 S23: 0.1402 REMARK 3 S31: -0.0675 S32: -0.0641 S33: 0.0230 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.4475 17.8224 -2.8328 REMARK 3 T TENSOR REMARK 3 T11: 0.1663 T22: 0.3709 REMARK 3 T33: 0.2527 T12: 0.0177 REMARK 3 T13: 0.0053 T23: -0.0905 REMARK 3 L TENSOR REMARK 3 L11: 6.2660 L22: 4.7052 REMARK 3 L33: 8.8209 L12: -5.1469 REMARK 3 L13: 6.0848 L23: -6.1792 REMARK 3 S TENSOR REMARK 3 S11: 0.2336 S12: 0.5077 S13: -0.4692 REMARK 3 S21: -0.3725 S22: -0.0726 S23: 0.4083 REMARK 3 S31: 0.4762 S32: -0.3477 S33: -0.1372 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 135 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9192 18.5712 -4.5311 REMARK 3 T TENSOR REMARK 3 T11: 0.2007 T22: 0.4002 REMARK 3 T33: 0.2678 T12: 0.0547 REMARK 3 T13: 0.0178 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 3.4716 L22: 2.0805 REMARK 3 L33: 5.6869 L12: -2.5134 REMARK 3 L13: -1.1016 L23: -0.0070 REMARK 3 S TENSOR REMARK 3 S11: 0.1198 S12: 0.3241 S13: -0.2358 REMARK 3 S21: -0.3421 S22: -0.2203 S23: -0.1408 REMARK 3 S31: 0.1779 S32: 0.4599 S33: 0.0949 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 9 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2658 23.9075 22.2776 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.3615 REMARK 3 T33: 0.2088 T12: -0.0507 REMARK 3 T13: 0.0457 T23: 0.0112 REMARK 3 L TENSOR REMARK 3 L11: 3.8409 L22: 6.3312 REMARK 3 L33: 6.2400 L12: -3.3153 REMARK 3 L13: 3.4435 L23: -0.0865 REMARK 3 S TENSOR REMARK 3 S11: -0.0445 S12: -1.0228 S13: -0.2764 REMARK 3 S21: 0.0829 S22: 0.1926 S23: -0.0191 REMARK 3 S31: 0.3332 S32: -0.2517 S33: -0.1219 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 28 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5846 6.3560 23.9592 REMARK 3 T TENSOR REMARK 3 T11: 0.7176 T22: 0.6190 REMARK 3 T33: 0.6293 T12: 0.2417 REMARK 3 T13: 0.0324 T23: 0.0664 REMARK 3 L TENSOR REMARK 3 L11: 8.9412 L22: 1.9871 REMARK 3 L33: 3.1347 L12: 0.7722 REMARK 3 L13: 5.2718 L23: 0.6829 REMARK 3 S TENSOR REMARK 3 S11: 0.3593 S12: 0.5624 S13: -1.3072 REMARK 3 S21: -0.0014 S22: -0.2625 S23: -0.7921 REMARK 3 S31: 2.1439 S32: 2.0207 S33: -0.1241 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 51 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8509 14.8026 17.4051 REMARK 3 T TENSOR REMARK 3 T11: 0.2138 T22: 0.3245 REMARK 3 T33: 0.2033 T12: -0.0977 REMARK 3 T13: 0.0095 T23: -0.0389 REMARK 3 L TENSOR REMARK 3 L11: 6.6654 L22: 6.1600 REMARK 3 L33: 9.1415 L12: -5.0472 REMARK 3 L13: -0.8936 L23: 0.2113 REMARK 3 S TENSOR REMARK 3 S11: -0.0783 S12: 0.1486 S13: -0.3818 REMARK 3 S21: -0.0092 S22: -0.0016 S23: 0.4659 REMARK 3 S31: 0.3772 S32: -0.7751 S33: 0.0554 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 52 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8022 19.9118 20.0816 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.2100 REMARK 3 T33: 0.1523 T12: -0.0511 REMARK 3 T13: 0.0311 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 2.7541 L22: 4.0995 REMARK 3 L33: 5.0618 L12: -2.8698 REMARK 3 L13: 1.4651 L23: -1.2592 REMARK 3 S TENSOR REMARK 3 S11: -0.0009 S12: -0.2719 S13: -0.3217 REMARK 3 S21: 0.0099 S22: 0.0641 S23: 0.1079 REMARK 3 S31: -0.0275 S32: -0.0425 S33: -0.0519 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 69 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.5877 25.5587 10.6256 REMARK 3 T TENSOR REMARK 3 T11: 0.1166 T22: 0.2224 REMARK 3 T33: 0.1336 T12: -0.0076 REMARK 3 T13: -0.0019 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 2.6089 L22: 8.5351 REMARK 3 L33: 4.0269 L12: -0.2571 REMARK 3 L13: 0.5709 L23: -3.1029 REMARK 3 S TENSOR REMARK 3 S11: -0.0615 S12: -0.0885 S13: 0.0872 REMARK 3 S21: 0.2608 S22: -0.0169 S23: 0.1924 REMARK 3 S31: -0.0393 S32: -0.2682 S33: 0.0773 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7102 16.8851 2.2787 REMARK 3 T TENSOR REMARK 3 T11: 0.4028 T22: 0.3271 REMARK 3 T33: 0.3834 T12: 0.0477 REMARK 3 T13: 0.0322 T23: -0.0086 REMARK 3 L TENSOR REMARK 3 L11: 2.4087 L22: 3.5401 REMARK 3 L33: 4.1252 L12: -1.5760 REMARK 3 L13: 2.4036 L23: -3.5845 REMARK 3 S TENSOR REMARK 3 S11: 0.7056 S12: 0.6766 S13: -1.1473 REMARK 3 S21: -0.1107 S22: -0.2601 S23: -0.2713 REMARK 3 S31: 1.5014 S32: 1.0973 S33: -0.3879 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.3729 32.4032 0.8164 REMARK 3 T TENSOR REMARK 3 T11: 0.2024 T22: 0.2569 REMARK 3 T33: 0.1861 T12: -0.0098 REMARK 3 T13: -0.0266 T23: 0.0432 REMARK 3 L TENSOR REMARK 3 L11: 4.6924 L22: 8.5533 REMARK 3 L33: 5.8703 L12: -2.3729 REMARK 3 L13: -1.7530 L23: 2.0179 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: 0.2555 S13: 0.4266 REMARK 3 S21: -0.2928 S22: 0.0559 S23: -0.0243 REMARK 3 S31: -0.7502 S32: -0.0419 S33: -0.0482 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 125 THROUGH 134 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3370 26.7216 -7.9009 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.3687 REMARK 3 T33: 0.2452 T12: 0.0050 REMARK 3 T13: 0.0133 T23: 0.0516 REMARK 3 L TENSOR REMARK 3 L11: 6.6327 L22: 9.5151 REMARK 3 L33: 9.1740 L12: -4.2260 REMARK 3 L13: -3.6299 L23: 6.1595 REMARK 3 S TENSOR REMARK 3 S11: 0.3260 S12: 0.5804 S13: 0.2840 REMARK 3 S21: -0.5929 S22: -0.0384 S23: -0.7863 REMARK 3 S31: -0.6293 S32: 0.5370 S33: -0.2526 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 135 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9344 27.9578 -9.0510 REMARK 3 T TENSOR REMARK 3 T11: 0.2449 T22: 0.3828 REMARK 3 T33: 0.2199 T12: 0.0605 REMARK 3 T13: -0.0609 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 5.9494 L22: 6.2427 REMARK 3 L33: 7.7289 L12: -0.1163 REMARK 3 L13: -0.6623 L23: 4.0878 REMARK 3 S TENSOR REMARK 3 S11: -0.0968 S12: 0.0195 S13: 0.1633 REMARK 3 S21: -0.6722 S22: -0.1301 S23: 0.7206 REMARK 3 S31: -0.5940 S32: -0.9276 S33: 0.2046 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 24 through 34 or REMARK 3 (resid 35 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 SD )) or resid 36 through 40 or resid 42 REMARK 3 through 44 or resid 46 through 50 or REMARK 3 resid 52 through 53 or resid 55 through REMARK 3 69 or resid 71 through 72 or resid 74 REMARK 3 through 101 or (resid 102 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 103 through 117 or (resid 118 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG or name CD )) or REMARK 3 resid 119 through 123 or (resid 124 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG )) or resid 125 REMARK 3 through 130 or resid 133 through 141 or REMARK 3 (resid 142 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD or name CE )) or resid 143 through 144 REMARK 3 or resid 146 through 150)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 24 through 27 or REMARK 3 (resid 28 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG1 or REMARK 3 name CG2)) or resid 29 through 40 or REMARK 3 resid 42 through 44 or resid 46 through REMARK 3 48 or (resid 49 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG )) REMARK 3 or resid 50 or resid 52 through 53 or REMARK 3 resid 55 through 69 or resid 71 through REMARK 3 72 or resid 74 through 100 or (resid 101 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG )) or resid 102 REMARK 3 through 121 or (resid 122 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG )) or resid 123 through 130 or REMARK 3 resid 133 through 137 or (resid 138 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG )) or resid 139 REMARK 3 through 144 or resid 146 through 149 or REMARK 3 (resid 150 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG1 or REMARK 3 name CG2 or name CD1)))) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QH6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-SEP-23. REMARK 100 THE DEPOSITION ID IS D_1292133239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29496 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.798 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.00810 REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.07630 REMARK 200 FOR SHELL : 2.910 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.0, 32% PEG 4000, 0.3 M REMARK 280 MGCL2, SEEDING, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.56333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.28167 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.28167 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 106.56333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 9 REMARK 465 SER A 10 REMARK 465 ILE A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 ALA A 14 REMARK 465 VAL A 15 REMARK 465 ILE A 16 REMARK 465 ASP A 17 REMARK 465 ALA A 18 REMARK 465 ILE A 19 REMARK 465 ASN A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 ALA A 23 REMARK 465 GLN B 151 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 28 CD1 REMARK 470 LYS A 49 CD CE NZ REMARK 470 LYS A 101 CD CE NZ REMARK 470 LYS A 122 CD CE NZ REMARK 470 LYS A 138 CD CE NZ REMARK 470 SER B 21 OG REMARK 470 MET B 35 CE REMARK 470 LYS B 49 CE NZ REMARK 470 ASN B 102 CG OD1 ND2 REMARK 470 LYS B 118 CE NZ REMARK 470 LYS B 124 CD CE NZ REMARK 470 LYS B 142 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 101 -43.58 71.67 REMARK 500 LYS B 101 -34.30 68.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 403 O REMARK 620 2 HOH B 314 O 173.4 REMARK 620 3 HOH B 328 O 88.2 90.7 REMARK 620 4 HOH B 378 O 95.0 86.6 175.5 REMARK 620 5 HOH B 387 O 97.7 88.7 85.9 90.5 REMARK 620 6 HOH B 391 O 84.1 89.3 85.1 98.4 170.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 406 O REMARK 620 2 HOH B 311 O 89.6 REMARK 620 3 HOH B 351 O 91.2 93.5 REMARK 620 4 HOH B 396 O 165.4 94.0 102.7 REMARK 620 5 HOH B 418 O 84.8 81.6 173.6 81.7 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SCB RELATED DB: PDB DBREF 8QH6 A 10 151 UNP P0A2U4 IPGC_SHIFL 10 151 DBREF 8QH6 B 10 151 UNP P0A2U4 IPGC_SHIFL 10 151 SEQADV 8QH6 GLY A 9 UNP P0A2U4 EXPRESSION TAG SEQADV 8QH6 GLY B 9 UNP P0A2U4 EXPRESSION TAG SEQRES 1 A 143 GLY SER ILE SER THR ALA VAL ILE ASP ALA ILE ASN SER SEQRES 2 A 143 GLY ALA THR LEU LYS ASP ILE ASN ALA ILE PRO ASP ASP SEQRES 3 A 143 MET MET ASP ASP ILE TYR SER TYR ALA TYR ASP PHE TYR SEQRES 4 A 143 ASN LYS GLY ARG ILE GLU GLU ALA GLU VAL PHE PHE ARG SEQRES 5 A 143 PHE LEU CYS ILE TYR ASP PHE TYR ASN VAL ASP TYR ILE SEQRES 6 A 143 MET GLY LEU ALA ALA ILE TYR GLN ILE LYS GLU GLN PHE SEQRES 7 A 143 GLN GLN ALA ALA ASP LEU TYR ALA VAL ALA PHE ALA LEU SEQRES 8 A 143 GLY LYS ASN ASP TYR THR PRO VAL PHE HIS THR GLY GLN SEQRES 9 A 143 CYS GLN LEU ARG LEU LYS ALA PRO LEU LYS ALA LYS GLU SEQRES 10 A 143 CYS PHE GLU LEU VAL ILE GLN HIS SER ASN ASP GLU LYS SEQRES 11 A 143 LEU LYS ILE LYS ALA GLN SER TYR LEU ASP ALA ILE GLN SEQRES 1 B 143 GLY SER ILE SER THR ALA VAL ILE ASP ALA ILE ASN SER SEQRES 2 B 143 GLY ALA THR LEU LYS ASP ILE ASN ALA ILE PRO ASP ASP SEQRES 3 B 143 MET MET ASP ASP ILE TYR SER TYR ALA TYR ASP PHE TYR SEQRES 4 B 143 ASN LYS GLY ARG ILE GLU GLU ALA GLU VAL PHE PHE ARG SEQRES 5 B 143 PHE LEU CYS ILE TYR ASP PHE TYR ASN VAL ASP TYR ILE SEQRES 6 B 143 MET GLY LEU ALA ALA ILE TYR GLN ILE LYS GLU GLN PHE SEQRES 7 B 143 GLN GLN ALA ALA ASP LEU TYR ALA VAL ALA PHE ALA LEU SEQRES 8 B 143 GLY LYS ASN ASP TYR THR PRO VAL PHE HIS THR GLY GLN SEQRES 9 B 143 CYS GLN LEU ARG LEU LYS ALA PRO LEU LYS ALA LYS GLU SEQRES 10 B 143 CYS PHE GLU LEU VAL ILE GLN HIS SER ASN ASP GLU LYS SEQRES 11 B 143 LEU LYS ILE LYS ALA GLN SER TYR LEU ASP ALA ILE GLN HET V9U A 201 12 HET MG B 201 1 HET MG B 202 1 HET CL B 203 1 HET CL B 204 1 HETNAM V9U 3-AZANYL-6-CHLORANYL-ISOINDOL-1-ONE HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 3 V9U C8 H5 CL N2 O FORMUL 4 MG 2(MG 2+) FORMUL 6 CL 2(CL 1-) FORMUL 8 HOH *259(H2 O) HELIX 1 AA1 LEU A 25 ASN A 29 5 5 HELIX 2 AA2 PRO A 32 LYS A 49 1 18 HELIX 3 AA3 ARG A 51 ASP A 66 1 16 HELIX 4 AA4 ASN A 69 LYS A 83 1 15 HELIX 5 AA5 GLN A 85 LYS A 101 1 17 HELIX 6 AA6 TYR A 104 LEU A 117 1 14 HELIX 7 AA7 ALA A 119 SER A 134 1 16 HELIX 8 AA8 ASP A 136 ILE A 150 1 15 HELIX 9 AA9 SER B 10 SER B 21 1 12 HELIX 10 AB1 LEU B 25 ASN B 29 5 5 HELIX 11 AB2 PRO B 32 LYS B 49 1 18 HELIX 12 AB3 ARG B 51 ASP B 66 1 16 HELIX 13 AB4 ASN B 69 LYS B 83 1 15 HELIX 14 AB5 GLN B 85 LYS B 101 1 17 HELIX 15 AB6 TYR B 104 LEU B 117 1 14 HELIX 16 AB7 ALA B 119 SER B 134 1 16 HELIX 17 AB8 ASP B 136 ILE B 150 1 15 LINK O HOH A 403 MG MG B 201 4455 1555 2.10 LINK O HOH A 406 MG MG B 202 1555 1555 2.18 LINK MG MG B 201 O HOH B 314 1555 1555 2.22 LINK MG MG B 201 O HOH B 328 1555 1555 2.11 LINK MG MG B 201 O HOH B 378 1555 1555 2.13 LINK MG MG B 201 O HOH B 387 1555 1555 2.01 LINK MG MG B 201 O HOH B 391 1555 1555 2.08 LINK MG MG B 202 O HOH B 311 1555 1555 2.33 LINK MG MG B 202 O HOH B 351 1555 1555 2.01 LINK MG MG B 202 O HOH B 396 1555 1555 2.21 LINK MG MG B 202 O HOH B 418 1555 1555 2.11 CRYST1 57.688 57.688 159.845 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017335 0.010008 0.000000 0.00000 SCALE2 0.000000 0.020016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006256 0.00000 MTRIX1 1 -0.999960 -0.002892 -0.008472 -23.82137 1 MTRIX2 1 0.001926 -0.993726 0.111822 46.54695 1 MTRIX3 1 -0.008742 0.111801 0.993692 -5.96136 1