HEADER FLAVOPROTEIN 27-SEP-23 8QNR TITLE CRYSTAL STRUCTURE OF ANCESTRAL L-GALACTONO-1,4-LACTONE DEHYDROGENASE: TITLE 2 G413N VARIANT IN COMPLEX WITH L-GULONO-1,4-LACTONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-GALACTONO-1,4-LACTONE DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.3.2.3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLAVOPROTEIN, OXIDOREDUCTASE, VITAMIN C EXPDTA X-RAY DIFFRACTION AUTHOR A.BOVERIO,A.MATTEVI REVDAT 1 01-MAY-24 8QNR 0 JRNL AUTH A.BOVERIO,A.MATTEVI JRNL TITL CRYSTAL STRUCTURE OF ANCESTRAL L-GALACTONO-1,4-LACTONE JRNL TITL 2 DEHYDROGENASE: G413N VARIANT IN COMPLEX WITH JRNL TITL 3 L-GULONO-1,4-LACTONE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.86 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 21138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.203 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1053 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3500 REMARK 3 BIN FREE R VALUE SET COUNT : 96 REMARK 3 BIN FREE R VALUE : 0.4250 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3764 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 63.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.32000 REMARK 3 B22 (A**2) : -0.27000 REMARK 3 B33 (A**2) : 1.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -6.43000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.412 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.292 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.325 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.892 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3918 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3701 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5320 ; 1.494 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8561 ; 1.190 ; 1.579 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 470 ; 7.649 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 209 ;36.292 ;22.249 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 678 ;17.500 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;17.758 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 500 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4358 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 853 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1892 ; 4.997 ; 6.431 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1891 ; 4.994 ; 6.430 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2358 ; 7.284 ; 9.629 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2359 ; 7.282 ; 9.631 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2026 ; 5.060 ; 6.976 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2027 ; 5.059 ; 6.978 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2963 ; 7.655 ;10.227 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4324 ;10.634 ;74.667 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4325 ;10.655 ;74.674 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8QNR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1292133593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAY-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9655 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22213 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 70.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.4 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.03500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.68400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.2 M LITHIUM NITRATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.01300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 TYR A 2 REMARK 465 ALA A 3 REMARK 465 PRO A 4 REMARK 465 ALA A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 ASP A 8 REMARK 465 GLU A 9 REMARK 465 GLY A 240 REMARK 465 LYS A 241 REMARK 465 LYS A 245 REMARK 465 VAL A 246 REMARK 465 LYS A 247 REMARK 465 PRO A 248 REMARK 465 ALA A 267 REMARK 465 PRO A 268 REMARK 465 PRO A 269 REMARK 465 ALA A 270 REMARK 465 ARG A 271 REMARK 465 ALA A 272 REMARK 465 PRO A 273 REMARK 465 GLU A 274 REMARK 465 VAL A 275 REMARK 465 ALA A 276 REMARK 465 ALA A 277 REMARK 465 PRO A 278 REMARK 465 SER A 279 REMARK 465 SER A 280 REMARK 465 SER A 281 REMARK 465 GLU A 282 REMARK 465 THR A 283 REMARK 465 ALA A 507 REMARK 465 ALA A 508 REMARK 465 GLU A 509 REMARK 465 SER A 510 REMARK 465 ALA A 511 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 358 CG CD CE NZ REMARK 470 LYS A 376 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 492 O HOH A 701 2.15 REMARK 500 OG1 THR A 88 OG1 THR A 183 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 61 -38.43 -33.42 REMARK 500 ASP A 75 15.83 -147.91 REMARK 500 ALA A 113 51.52 -100.30 REMARK 500 SER A 114 -39.37 70.27 REMARK 500 GLU A 140 8.44 -69.78 REMARK 500 SER A 158 -177.77 -170.05 REMARK 500 ASP A 303 68.12 -170.93 REMARK 500 LEU A 418 70.72 -114.48 REMARK 500 LEU A 444 -42.94 -131.68 REMARK 500 ASP A 462 109.68 -53.63 REMARK 500 ASP A 491 59.24 -140.03 REMARK 500 PHE A 505 79.80 -119.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 776 DISTANCE = 6.08 ANGSTROMS DBREF 8QNR A 1 511 PDB 8QNR 8QNR 1 511 SEQRES 1 A 511 MET TYR ALA PRO ALA ALA GLU ASP GLU HIS THR ILE THR SEQRES 2 A 511 ASN TRP SER GLY THR HIS ALA VAL ARG PRO LYS ARG PHE SEQRES 3 A 511 PHE GLN PRO GLU SER VAL GLU GLU LEU GLU LYS ILE VAL SEQRES 4 A 511 LYS GLU ALA HIS GLU LYS GLY GLN LYS ILE ARG PRO VAL SEQRES 5 A 511 GLY SER GLY LEU SER PRO ASN GLY LEU ALA PHE SER GLU SEQRES 6 A 511 ASP GLY MET VAL SER LEU ALA LEU MET ASP LYS VAL LEU SEQRES 7 A 511 HIS VAL ASP LYS GLU LYS LYS GLN VAL THR VAL GLN ALA SEQRES 8 A 511 GLY ALA ARG VAL GLN GLN VAL VAL ASP ALA LEU ARG PRO SEQRES 9 A 511 HIS GLY LEU THR LEU GLN ASN PHE ALA SER ILE SER GLU SEQRES 10 A 511 GLN GLN ILE GLY GLY PHE ILE GLN VAL GLY ALA HIS GLY SEQRES 11 A 511 THR GLY ALA ARG ILE PRO PRO VAL ASP GLU GLN VAL VAL SEQRES 12 A 511 SER MET LYS LEU VAL THR PRO ALA LYS GLY THR ILE GLU SEQRES 13 A 511 LEU SER GLU GLU LYS ASP PRO GLU LEU PHE ARG LEU ALA SEQRES 14 A 511 ARG CYS GLY LEU GLY ALA LEU GLY VAL VAL THR GLU VAL SEQRES 15 A 511 THR LEU GLN CYS VAL PRO ARG HIS LYS LEU LEU GLU HIS SEQRES 16 A 511 THR PHE VAL ALA THR MET LYS GLU VAL LYS LYS ASN HIS SEQRES 17 A 511 GLU LYS LEU LEU ARG GLU ASN LYS HIS VAL ARG TYR MET SEQRES 18 A 511 TRP ILE PRO TYR THR ASP THR VAL VAL VAL VAL THR CYS SEQRES 19 A 511 ASN PRO LEU PRO GLU GLY LYS LYS ALA PRO LYS VAL LYS SEQRES 20 A 511 PRO GLN TYR SER GLU ASP GLU LYS LEU GLN PRO LEU ARG SEQRES 21 A 511 ASN LEU LEU ARG GLU ALA ALA PRO PRO ALA ARG ALA PRO SEQRES 22 A 511 GLU VAL ALA ALA PRO SER SER SER GLU THR SER PRO GLU SEQRES 23 A 511 VAL SER GLY LEU SER PHE THR GLU LEU ARG ASP ALA LEU SEQRES 24 A 511 LEU ALA VAL ASP PRO LEU ASP THR GLU TRP VAL LYS ARG SEQRES 25 A 511 VAL ASN GLN ALA GLU ALA GLU PHE TRP LYS ARG SER GLU SEQRES 26 A 511 GLY TYR ARG VAL GLY TRP SER ASP GLU ILE LEU GLY PHE SEQRES 27 A 511 ASP CYS GLY GLY GLN GLN TRP VAL SER GLU VAL ALA PHE SEQRES 28 A 511 PRO ALA GLY THR LEU GLU LYS PRO SER ALA ALA ASP LEU SEQRES 29 A 511 GLU TYR MET GLU GLU LEU MET ARG LEU ILE ASN LYS GLU SEQRES 30 A 511 GLY ILE PRO ALA PRO ALA PRO ILE GLU GLN ARG TRP THR SEQRES 31 A 511 ALA GLY SER SER SER PRO MET SER PRO ALA TYR SER PRO SEQRES 32 A 511 SER PRO ASP SER VAL PHE SER TRP VAL ASN ILE ILE MET SEQRES 33 A 511 TYR LEU PRO THR GLU ASP GLU GLU GLN ARG LYS ALA ILE SEQRES 34 A 511 THR GLU ALA PHE ARG GLN TYR ARG LYS LEU CYS GLU THR SEQRES 35 A 511 ARG LEU TRP ASP LYS TYR GLY ALA ALA GLU HIS TRP ALA SEQRES 36 A 511 LYS ILE GLU VAL PRO GLU ASP PRO GLU GLU LEU GLU ALA SEQRES 37 A 511 LEU ARG GLU ARG LEU ARG LYS ARG TYR PRO GLY VAL ASP SEQRES 38 A 511 LYS PHE ASN LYS ALA ARG ARG GLU LEU ASP PRO LYS ASN SEQRES 39 A 511 ILE LEU SER ASN ASP MET ILE ASP SER LEU PHE PRO ALA SEQRES 40 A 511 ALA GLU SER ALA HET FAD A 601 53 HET X8L A 602 12 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM X8L L-GULONO-1,4-LACTONE HETSYN X8L (3S,4R,5R)-5-[(1S)-1,2-BIS(OXIDANYL)ETHYL]-3,4- HETSYN 2 X8L BIS(OXIDANYL)OXOLAN-2-ONE; L-GULONOLACTONE FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 X8L C6 H10 O6 FORMUL 4 HOH *76(H2 O) HELIX 1 AA1 SER A 31 GLY A 46 1 16 HELIX 2 AA2 ARG A 94 LEU A 102 1 9 HELIX 3 AA3 GLN A 119 GLN A 125 1 7 HELIX 4 AA4 PRO A 137 GLU A 140 5 4 HELIX 5 AA5 ASP A 162 ARG A 170 1 9 HELIX 6 AA6 THR A 200 ASN A 215 1 16 HELIX 7 AA7 SER A 251 ALA A 266 1 16 HELIX 8 AA8 SER A 291 VAL A 302 1 12 HELIX 9 AA9 ASP A 306 ARG A 323 1 18 HELIX 10 AB1 SER A 332 GLY A 337 1 6 HELIX 11 AB2 ALA A 361 GLU A 377 1 17 HELIX 12 AB3 ASP A 422 LEU A 444 1 23 HELIX 13 AB4 LEU A 444 GLY A 449 1 6 HELIX 14 AB5 ASP A 462 TYR A 477 1 16 HELIX 15 AB6 GLY A 479 ASP A 491 1 13 HELIX 16 AB7 ASN A 498 PHE A 505 1 8 SHEET 1 AA1 2 ILE A 12 THR A 13 0 SHEET 2 AA1 2 ALA A 20 VAL A 21 -1 O VAL A 21 N ILE A 12 SHEET 1 AA2 3 ARG A 25 PHE A 27 0 SHEET 2 AA2 3 GLY A 67 SER A 70 1 O SER A 70 N PHE A 27 SHEET 3 AA2 3 ARG A 50 VAL A 52 1 N ARG A 50 O GLY A 67 SHEET 1 AA3 4 VAL A 77 ASP A 81 0 SHEET 2 AA3 4 GLN A 86 GLN A 90 -1 O GLN A 86 N ASP A 81 SHEET 3 AA3 4 VAL A 178 PRO A 188 -1 O VAL A 182 N VAL A 89 SHEET 4 AA3 4 LEU A 107 LEU A 109 -1 N THR A 108 O VAL A 187 SHEET 1 AA4 5 VAL A 77 ASP A 81 0 SHEET 2 AA4 5 GLN A 86 GLN A 90 -1 O GLN A 86 N ASP A 81 SHEET 3 AA4 5 VAL A 178 PRO A 188 -1 O VAL A 182 N VAL A 89 SHEET 4 AA4 5 VAL A 142 THR A 149 -1 N SER A 144 O THR A 183 SHEET 5 AA4 5 GLY A 153 SER A 158 -1 O LEU A 157 N MET A 145 SHEET 1 AA5 8 GLY A 326 TRP A 331 0 SHEET 2 AA5 8 LYS A 191 ALA A 199 -1 N GLU A 194 O ARG A 328 SHEET 3 AA5 8 VAL A 229 PRO A 236 -1 O VAL A 231 N PHE A 197 SHEET 4 AA5 8 HIS A 217 TRP A 222 -1 N MET A 221 O VAL A 230 SHEET 5 AA5 8 ILE A 385 ALA A 391 -1 O GLN A 387 N TYR A 220 SHEET 6 AA5 8 SER A 407 TYR A 417 -1 O TRP A 411 N ARG A 388 SHEET 7 AA5 8 GLN A 344 THR A 355 -1 N SER A 347 O ILE A 414 SHEET 8 AA5 8 ALA A 451 GLU A 452 -1 O ALA A 451 N ALA A 350 CISPEP 1 ALA A 383 PRO A 384 0 0.17 CRYST1 57.280 70.026 69.631 90.00 102.16 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017458 0.000000 0.003763 0.00000 SCALE2 0.000000 0.014280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014691 0.00000