HEADER VIRAL PROTEIN 02-OCT-23 8QPH TITLE CRYSTAL STRUCTURE OF LYMANTRIA DISPAR CPV14 POLYHEDRA 14 CRYSTALS COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYHEDRIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LYMANTRIA DISPAR; SOURCE 3 ORGANISM_COMMON: GYPSY MOTH; SOURCE 4 ORGANISM_TAXID: 13123; SOURCE 5 GENE: POD; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS POLYHEDRIN, GTP BINDING, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.TRINCAO,A.WARREN,A.CRAWSHAW,G.SUTTON,D.STUART,G.EVANS REVDAT 1 08-NOV-23 8QPH 0 JRNL AUTH A.J.WARREN,J.TRINCAO,A.D.CRAWSHAW,E.BEALE,G.DULLER, JRNL AUTH 2 A.STALLWOOD,M.LUNNON,R.LITTLEWOOD,A.PRESCOTT,A.FOSTER, JRNL AUTH 3 N.SMITH,G.REHM,S.GAYADEEN,C.BLOOMER,L.ALIANELLI,D.LAUNDY, JRNL AUTH 4 J.SUTTER,L.CAHILL,G.EVANS JRNL TITL VMXM - SUB-MICRON MICROFOCUS BEAMLINE FOR MACROMOLECULAR JRNL TITL 2 CRYSTALLOGRAPHY AT DIAMOND LIGHT SOURCE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.JI,D.AXFORD,R.OWEN,G.EVANS,H.M.GINN,G.SUTTON,D.I.STUART REMARK 1 TITL POLYHEDRA STRUCTURES AND THE EVOLUTION OF THE INSECT REMARK 1 TITL 2 VIRUSES. REMARK 1 REF J STRUCT BIOL V. 192 88 2015 REMARK 1 REFN ESSN 1095-8657 REMARK 1 PMID 26291392 REMARK 1 DOI 10.1016/J.JSB.2015.08.009 REMARK 2 REMARK 2 RESOLUTION. 1.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 72.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 39617 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1984 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 72.9700 - 3.2300 0.99 2884 149 0.1217 0.1353 REMARK 3 2 3.2300 - 2.5600 1.00 2822 149 0.1271 0.1459 REMARK 3 3 2.5600 - 2.2400 1.00 2790 149 0.1319 0.1635 REMARK 3 4 2.2400 - 2.0400 0.79 2204 115 0.1462 0.1756 REMARK 3 5 2.0300 - 1.8900 1.00 2797 145 0.1399 0.1786 REMARK 3 6 1.8900 - 1.7800 0.76 2092 113 0.1800 0.1978 REMARK 3 7 1.7800 - 1.6900 1.00 2791 150 0.1652 0.2165 REMARK 3 8 1.6900 - 1.6200 1.00 2749 144 0.1836 0.2206 REMARK 3 9 1.6100 - 1.5500 1.00 2770 146 0.1924 0.2298 REMARK 3 10 1.5500 - 1.5000 1.00 2765 141 0.2402 0.2278 REMARK 3 11 1.5000 - 1.4500 1.00 2753 147 0.2830 0.3383 REMARK 3 12 1.4500 - 1.4100 1.00 2769 146 0.3167 0.3185 REMARK 3 13 1.4100 - 1.3700 1.00 2751 146 0.3381 0.3471 REMARK 3 14 1.3700 - 1.3400 0.98 2696 144 0.3548 0.3823 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.202 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.063 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2078 REMARK 3 ANGLE : 1.141 2832 REMARK 3 CHIRALITY : 0.100 296 REMARK 3 PLANARITY : 0.008 363 REMARK 3 DIHEDRAL : 15.167 756 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QPH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1292133662. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : VMXM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.5814 REMARK 200 MONOCHROMATOR : HORIZONTAL DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X CDTE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2.MULTIPLEX REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39736 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 72.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 200 DATA REDUNDANCY : 43.30 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 15.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: CUBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 22.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IN VIVO, PH 7.5, IN CELL, TEMPERATURE REMARK 280 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 51.59450 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 51.59450 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 51.59450 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 51.59450 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 51.59450 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 51.59450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 11-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 7 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 7 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 11 1.000000 0.000000 0.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 12 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 12 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 12 0.000000 1.000000 0.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 13 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 593 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 68 REMARK 465 LYS A 69 REMARK 465 SER A 70 REMARK 465 ALA A 71 REMARK 465 ARG A 72 REMARK 465 GLU A 73 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 67 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 146 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 50 -19.20 -142.65 REMARK 500 ASP A 109 48.09 -82.33 REMARK 500 PHE A 219 -55.14 -142.99 REMARK 500 ASN A 232 32.28 74.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 604 DISTANCE = 6.47 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GTP A 301 O3G REMARK 620 2 GTP A 301 O2B 91.7 REMARK 620 3 HOH A 401 O 98.0 85.9 REMARK 620 4 HOH A 463 O 173.2 92.5 87.6 REMARK 620 5 HOH A 504 O 87.2 90.5 173.7 87.4 REMARK 620 N 1 2 3 4 DBREF 8QPH A 1 248 UNP Q91IE3 Q91IE3_9REOV 1 249 SEQADV 8QPH MET A 190 UNP Q91IE3 VAL 191 CONFLICT SEQRES 1 A 249 MET GLU ASN SER ALA ARG GLN VAL ALA GLN ASP THR ARG SEQRES 2 A 249 GLU LEU HIS LEU LEU GLN HIS ILE LYS SER ASP GLN SER SEQRES 3 A 249 TYR ILE TYR VAL PHE VAL PHE LEU TYR TYR ARG ASP HIS SEQRES 4 A 249 SER VAL ARG VAL TRP LYS LEU THR ASN PRO VAL SER ILE SEQRES 5 A 249 SER GLU THR LEU ASP TYR ASP ASP LEU ILE ASN ASN VAL SEQRES 6 A 249 ASN ARG CYS LYS SER ALA ARG GLU PRO ALA ILE TYR TYR SEQRES 7 A 249 ARG GLU GLY ILE THR GLY ASN ASP ALA GLY ASP SER ILE SEQRES 8 A 249 ILE ASP LYS ALA TYR CYS GLU PRO VAL SER PHE MET ILE SEQRES 9 A 249 VAL ALA CYS GLY ASP VAL ASP ILE GLN THR ILE GLU VAL SEQRES 10 A 249 ASN ILE GLN GLY TYR ASP GLU ILE GLU GLY VAL GLY ILE SEQRES 11 A 249 LEU ASP SER ASN VAL THR PRO PRO TYR ALA ILE THR ALA SEQRES 12 A 249 THR LYS PHE GLU ARG LYS THR SER GLY GLY TYR ILE PHE SEQRES 13 A 249 TYR THR TYR CYS GLY LEU PHE GLY HIS GLY ASP ARG GLY SEQRES 14 A 249 HIS PRO THR MET ALA VAL GLY VAL GLU LYS LYS ASN ARG SEQRES 15 A 249 ASN ALA PHE GLY ARG MET HIS PRO MET TYR VAL ALA ALA SEQRES 16 A 249 ASN TYR LYS ARG ARG ASN PHE TRP ALA LYS LYS ASP TRP SEQRES 17 A 249 TRP PHE PRO THR GLU GLY GLN MET VAL GLU GLN PHE ILE SEQRES 18 A 249 LYS GLN GLN SER ILE PRO TYR VAL THR ALA ASP ASN VAL SEQRES 19 A 249 MET ILE ALA PRO CYS VAL ARG GLU ILE ARG HIS HIS ALA SEQRES 20 A 249 HIS TYR HET GTP A 301 32 HET MG A 302 1 HETNAM GTP GUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 GTP C10 H16 N5 O14 P3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *204(H2 O) HELIX 1 AA1 SER A 4 SER A 23 1 20 HELIX 2 AA2 ASP A 57 ILE A 62 1 6 HELIX 3 AA3 ALA A 75B GLY A 84 1 10 HELIX 4 AA4 ASP A 111 ILE A 115 5 5 HELIX 5 AA5 PRO A 136 ILE A 140 5 5 HELIX 6 AA6 THR A 141 PHE A 145 5 5 HELIX 7 AA7 GLY A 165 HIS A 169 5 5 HELIX 8 AA8 TYR A 191 LYS A 197 1 7 HELIX 9 AA9 THR A 211 PHE A 219 1 9 SHEET 1 AA1 6 GLU A 146 SER A 150 0 SHEET 2 AA1 6 TYR A 153 LEU A 161 -1 O PHE A 155 N LYS A 148 SHEET 3 AA1 6 SER A 101 CYS A 107 -1 N ILE A 104 O TYR A 158 SHEET 4 AA1 6 ILE A 28 TYR A 35 -1 N PHE A 33 O MET A 103 SHEET 5 AA1 6 VAL A 41 ASN A 48 -1 O ASN A 48 N ILE A 28 SHEET 6 AA1 6 LYS A 205 PHE A 209 -1 O LYS A 205 N LYS A 45 SHEET 1 AA2 3 SER A 51 LEU A 56 0 SHEET 2 AA2 3 THR A 171 GLU A 177 -1 O MET A 172 N LEU A 56 SHEET 3 AA2 3 GLU A 116 GLN A 120 -1 N ASN A 118 O ALA A 173 SHEET 1 AA3 2 TYR A 227 VAL A 228 0 SHEET 2 AA3 2 MET A 234 ILE A 235 -1 O ILE A 235 N TYR A 227 LINK O3G GTP A 301 MG MG A 302 1555 1555 2.00 LINK O2B GTP A 301 MG MG A 302 1555 1555 2.09 LINK MG MG A 302 O HOH A 401 1555 1555 2.14 LINK MG MG A 302 O HOH A 463 1555 1555 2.64 LINK MG MG A 302 O HOH A 504 1555 1555 2.10 CISPEP 1 PHE A 201 TRP A 202 0 10.10 CRYST1 103.189 103.189 103.189 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009691 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009691 0.00000