HEADER VIRAL PROTEIN 07-OCT-23 8QRH TITLE INACTIVATED TICK-BORNE ENCEPHALITIS VIRUS (TBEV) VACCINE STRAIN TITLE 2 SOFJIN-CHUMAKOV COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 OTHER_DETAILS: KC806252.1; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: SMALL ENVELOPE PROTEIN M; COMPND 7 CHAIN: D, E, F; COMPND 8 SYNONYM: MATRIX PROTEIN; COMPND 9 OTHER_DETAILS: KC806252.1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORTHOFLAVIVIRUS ENCEPHALITIDIS; SOURCE 3 ORGANISM_COMMON: ENVELOPE PROTEIN (E); SOURCE 4 ORGANISM_TAXID: 3052465; SOURCE 5 STRAIN: SOFJIN-CHUMAKOV; SOURCE 6 CELL_LINE: PRIMARY CHICKEN EMBRYO FIBROBLASTS; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: ORTHOFLAVIVIRUS ENCEPHALITIDIS; SOURCE 9 ORGANISM_TAXID: 3052465; SOURCE 10 STRAIN: SOFJIN-CHUMAKOV; SOURCE 11 CELL_LINE: PRIMARY CHICKEN EMBRYO FIBROBLASTS KEYWDS TBEV, FLAVIVIRUS, VIRION ENVELOPE, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR A.V.MOISEENKO,Y.ZHANG,M.VOROVITCH,A.IVANOVA,Z.LIU,D.I.OSOLODKIN, AUTHOR 2 A.EGOROV,A.ISHMUKHAMETOV,O.S.SOKOLOVA REVDAT 2 10-JUL-24 8QRH 1 JRNL REVDAT 1 05-JUN-24 8QRH 0 JRNL AUTH E.B.PICHKUR,M.F.VOROVITCH,A.L.IVANOVA,E.V.PROTOPOPOVA, JRNL AUTH 2 V.B.LOKTEV,D.I.OSOLODKIN,A.A.ISHMUKHAMETOV,V.R.SAMYGINA JRNL TITL THE STRUCTURE OF INACTIVATED MATURE TICK-BORNE ENCEPHALITIS JRNL TITL 2 VIRUS AT 3.0 ANGSTROM RESOLUTION. JRNL REF EMERG MICROBES INFECT V. 13 13849 2024 JRNL REFN ESSN 2222-1751 JRNL PMID 38465849 JRNL DOI 10.1080/22221751.2024.2313849 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, UCSF CHIMERA, COOT, ISOLDE, REMARK 3 PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 5O6A REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 70491 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: THE LOCAL NON-UNIFORM REFINEMENT WAS USED ON THE REMARK 3 SET OF PARTICLES SUBJECTED TO I SYMMETRY EXPANSION REMARK 4 REMARK 4 8QRH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1292133782. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TICK-BORNE ENCEPHALITIS VIRUS REMARK 245 (STRAIN SOFJIN-CHUMAKOV) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6800.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 19 -99.64 -127.89 REMARK 500 ALA A 123 -111.65 43.61 REMARK 500 MET A 176 44.09 -107.66 REMARK 500 LEU A 202 -151.37 -97.42 REMARK 500 HIS A 323 30.32 -89.57 REMARK 500 ALA A 346 -129.61 46.28 REMARK 500 SER A 349 65.14 -155.51 REMARK 500 ASN A 361 66.23 34.43 REMARK 500 GLU B 7 10.61 -69.86 REMARK 500 ASN B 8 79.00 -152.45 REMARK 500 THR B 56 -63.45 -95.71 REMARK 500 GLN B 87 97.57 -65.34 REMARK 500 MET B 176 43.17 -83.91 REMARK 500 ALA B 249 -128.25 50.21 REMARK 500 GLU B 295 -9.19 -59.50 REMARK 500 PRO B 350 -7.65 -58.89 REMARK 500 ASN B 361 63.60 32.58 REMARK 500 ASN C 8 36.23 73.18 REMARK 500 GLU C 170 -119.29 55.71 REMARK 500 ALA C 224 55.52 -91.00 REMARK 500 ALA C 249 -121.06 50.71 REMARK 500 ASN C 361 70.06 30.33 REMARK 500 ASN C 367 23.87 -143.35 REMARK 500 PHE C 449 6.38 57.37 REMARK 500 THR E 13 -131.21 57.64 REMARK 500 LEU E 25 -72.97 -129.51 REMARK 500 SER E 56 94.73 -68.54 REMARK 500 HIS F 17 25.29 -145.31 REMARK 500 ARG F 60 2.51 -66.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 412 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-18614 RELATED DB: EMDB REMARK 900 INACTIVATED TICK-BORNE ENCEPHALITIS VACCINE OF SOFJIN-CHUMAKOV REMARK 900 STRAIN DBREF 8QRH A 1 492 UNP D2XD30 D2XD30_9FLAV 1 492 DBREF 8QRH B 1 492 UNP D2XD30 D2XD30_9FLAV 1 492 DBREF 8QRH C 1 492 UNP D2XD30 D2XD30_9FLAV 1 492 DBREF 8QRH D 2 72 UNP Q01299 POLG_TBEVH 207 277 DBREF 8QRH E 2 72 UNP Q01299 POLG_TBEVH 207 277 DBREF 8QRH F 2 72 UNP Q01299 POLG_TBEVH 207 277 SEQADV 8QRH ALA A 426 UNP D2XD30 THR 426 CONFLICT SEQADV 8QRH ALA B 426 UNP D2XD30 THR 426 CONFLICT SEQADV 8QRH ALA C 426 UNP D2XD30 THR 426 CONFLICT SEQRES 1 A 492 SER ARG CYS THR HIS LEU GLU ASN ARG ASP PHE VAL THR SEQRES 2 A 492 GLY THR GLN GLY THR THR ARG VAL THR LEU VAL LEU GLU SEQRES 3 A 492 LEU GLY GLY CYS VAL THR ILE THR ALA GLU GLY LYS PRO SEQRES 4 A 492 SER MET ASP VAL TRP LEU ASP SER ILE TYR GLN GLU ASN SEQRES 5 A 492 PRO ALA LYS THR ARG GLU TYR CYS LEU HIS ALA LYS LEU SEQRES 6 A 492 SER ASP THR LYS VAL ALA ALA ARG CYS PRO THR MET GLY SEQRES 7 A 492 PRO ALA THR LEU ALA GLU GLU HIS GLN SER GLY THR VAL SEQRES 8 A 492 CYS LYS ARG ASP GLN SER ASP ARG GLY TRP GLY ASN HIS SEQRES 9 A 492 CYS GLY LEU PHE GLY LYS GLY SER ILE VAL THR CYS VAL SEQRES 10 A 492 LYS ALA SER CYS GLU ALA LYS LYS LYS ALA THR GLY HIS SEQRES 11 A 492 VAL TYR ASP ALA ASN LYS ILE VAL TYR THR VAL LYS VAL SEQRES 12 A 492 GLU PRO HIS THR GLY ASP TYR VAL ALA ALA ASN GLU THR SEQRES 13 A 492 HIS SER GLY ARG LYS THR ALA SER PHE THR VAL SER SER SEQRES 14 A 492 GLU LYS THR ILE LEU THR MET GLY ASP TYR GLY ASP VAL SEQRES 15 A 492 SER LEU LEU CYS ARG VAL ALA SER GLY VAL ASP LEU ALA SEQRES 16 A 492 GLN THR VAL ILE LEU GLU LEU ASP LYS THR SER GLU HIS SEQRES 17 A 492 LEU PRO THR ALA TRP GLN VAL HIS ARG ASP TRP PHE ASN SEQRES 18 A 492 ASP LEU ALA LEU PRO TRP LYS HIS GLU GLY ALA GLN ASN SEQRES 19 A 492 TRP ASN ASN ALA GLU ARG LEU VAL GLU PHE GLY ALA PRO SEQRES 20 A 492 HIS ALA VAL LYS MET ASP VAL TYR ASN LEU GLY ASP HIS SEQRES 21 A 492 THR GLY VAL LEU LEU LYS SER LEU ALA GLY VAL PRO VAL SEQRES 22 A 492 ALA HIS ILE ASP GLY THR LYS TYR HIS LEU LYS SER GLY SEQRES 23 A 492 HIS VAL THR CYS GLU VAL GLY LEU GLU LYS LEU LYS MET SEQRES 24 A 492 LYS GLY LEU THR TYR THR MET CYS ASP LYS THR LYS PHE SEQRES 25 A 492 THR TRP LYS ARG ILE PRO THR ASP SER GLY HIS ASP THR SEQRES 26 A 492 VAL VAL MET GLU VAL ALA PHE SER GLY THR LYS PRO CYS SEQRES 27 A 492 ARG ILE PRO VAL ARG ALA VAL ALA HIS GLY SER PRO ASP SEQRES 28 A 492 VAL ASN VAL ALA MET LEU ILE THR PRO ASN PRO ILE ILE SEQRES 29 A 492 GLU ASN ASN GLY GLY GLY PHE ILE GLU MET GLN LEU PRO SEQRES 30 A 492 PRO GLY ASP ASN ILE ILE TYR VAL GLY GLU LEU SER HIS SEQRES 31 A 492 GLN TRP PHE GLN LYS GLY SER SER ILE GLY ARG VAL PHE SEQRES 32 A 492 GLN LYS THR ARG LYS GLY ILE GLU ARG LEU THR VAL ILE SEQRES 33 A 492 GLY GLU HIS ALA TRP ASP PHE GLY SER ALA GLY GLY PHE SEQRES 34 A 492 LEU THR SER VAL GLY LYS ALA LEU HIS THR VAL LEU GLY SEQRES 35 A 492 GLY ALA PHE ASN SER LEU PHE GLY GLY VAL GLY PHE LEU SEQRES 36 A 492 PRO LYS ILE LEU VAL GLY VAL VAL LEU ALA TRP LEU GLY SEQRES 37 A 492 LEU ASN MET ARG ASN PRO THR MET SER MET SER PHE LEU SEQRES 38 A 492 LEU ALA GLY GLY LEU VAL LEU ALA MET THR LEU SEQRES 1 B 492 SER ARG CYS THR HIS LEU GLU ASN ARG ASP PHE VAL THR SEQRES 2 B 492 GLY THR GLN GLY THR THR ARG VAL THR LEU VAL LEU GLU SEQRES 3 B 492 LEU GLY GLY CYS VAL THR ILE THR ALA GLU GLY LYS PRO SEQRES 4 B 492 SER MET ASP VAL TRP LEU ASP SER ILE TYR GLN GLU ASN SEQRES 5 B 492 PRO ALA LYS THR ARG GLU TYR CYS LEU HIS ALA LYS LEU SEQRES 6 B 492 SER ASP THR LYS VAL ALA ALA ARG CYS PRO THR MET GLY SEQRES 7 B 492 PRO ALA THR LEU ALA GLU GLU HIS GLN SER GLY THR VAL SEQRES 8 B 492 CYS LYS ARG ASP GLN SER ASP ARG GLY TRP GLY ASN HIS SEQRES 9 B 492 CYS GLY LEU PHE GLY LYS GLY SER ILE VAL THR CYS VAL SEQRES 10 B 492 LYS ALA SER CYS GLU ALA LYS LYS LYS ALA THR GLY HIS SEQRES 11 B 492 VAL TYR ASP ALA ASN LYS ILE VAL TYR THR VAL LYS VAL SEQRES 12 B 492 GLU PRO HIS THR GLY ASP TYR VAL ALA ALA ASN GLU THR SEQRES 13 B 492 HIS SER GLY ARG LYS THR ALA SER PHE THR VAL SER SER SEQRES 14 B 492 GLU LYS THR ILE LEU THR MET GLY ASP TYR GLY ASP VAL SEQRES 15 B 492 SER LEU LEU CYS ARG VAL ALA SER GLY VAL ASP LEU ALA SEQRES 16 B 492 GLN THR VAL ILE LEU GLU LEU ASP LYS THR SER GLU HIS SEQRES 17 B 492 LEU PRO THR ALA TRP GLN VAL HIS ARG ASP TRP PHE ASN SEQRES 18 B 492 ASP LEU ALA LEU PRO TRP LYS HIS GLU GLY ALA GLN ASN SEQRES 19 B 492 TRP ASN ASN ALA GLU ARG LEU VAL GLU PHE GLY ALA PRO SEQRES 20 B 492 HIS ALA VAL LYS MET ASP VAL TYR ASN LEU GLY ASP HIS SEQRES 21 B 492 THR GLY VAL LEU LEU LYS SER LEU ALA GLY VAL PRO VAL SEQRES 22 B 492 ALA HIS ILE ASP GLY THR LYS TYR HIS LEU LYS SER GLY SEQRES 23 B 492 HIS VAL THR CYS GLU VAL GLY LEU GLU LYS LEU LYS MET SEQRES 24 B 492 LYS GLY LEU THR TYR THR MET CYS ASP LYS THR LYS PHE SEQRES 25 B 492 THR TRP LYS ARG ILE PRO THR ASP SER GLY HIS ASP THR SEQRES 26 B 492 VAL VAL MET GLU VAL ALA PHE SER GLY THR LYS PRO CYS SEQRES 27 B 492 ARG ILE PRO VAL ARG ALA VAL ALA HIS GLY SER PRO ASP SEQRES 28 B 492 VAL ASN VAL ALA MET LEU ILE THR PRO ASN PRO ILE ILE SEQRES 29 B 492 GLU ASN ASN GLY GLY GLY PHE ILE GLU MET GLN LEU PRO SEQRES 30 B 492 PRO GLY ASP ASN ILE ILE TYR VAL GLY GLU LEU SER HIS SEQRES 31 B 492 GLN TRP PHE GLN LYS GLY SER SER ILE GLY ARG VAL PHE SEQRES 32 B 492 GLN LYS THR ARG LYS GLY ILE GLU ARG LEU THR VAL ILE SEQRES 33 B 492 GLY GLU HIS ALA TRP ASP PHE GLY SER ALA GLY GLY PHE SEQRES 34 B 492 LEU THR SER VAL GLY LYS ALA LEU HIS THR VAL LEU GLY SEQRES 35 B 492 GLY ALA PHE ASN SER LEU PHE GLY GLY VAL GLY PHE LEU SEQRES 36 B 492 PRO LYS ILE LEU VAL GLY VAL VAL LEU ALA TRP LEU GLY SEQRES 37 B 492 LEU ASN MET ARG ASN PRO THR MET SER MET SER PHE LEU SEQRES 38 B 492 LEU ALA GLY GLY LEU VAL LEU ALA MET THR LEU SEQRES 1 C 492 SER ARG CYS THR HIS LEU GLU ASN ARG ASP PHE VAL THR SEQRES 2 C 492 GLY THR GLN GLY THR THR ARG VAL THR LEU VAL LEU GLU SEQRES 3 C 492 LEU GLY GLY CYS VAL THR ILE THR ALA GLU GLY LYS PRO SEQRES 4 C 492 SER MET ASP VAL TRP LEU ASP SER ILE TYR GLN GLU ASN SEQRES 5 C 492 PRO ALA LYS THR ARG GLU TYR CYS LEU HIS ALA LYS LEU SEQRES 6 C 492 SER ASP THR LYS VAL ALA ALA ARG CYS PRO THR MET GLY SEQRES 7 C 492 PRO ALA THR LEU ALA GLU GLU HIS GLN SER GLY THR VAL SEQRES 8 C 492 CYS LYS ARG ASP GLN SER ASP ARG GLY TRP GLY ASN HIS SEQRES 9 C 492 CYS GLY LEU PHE GLY LYS GLY SER ILE VAL THR CYS VAL SEQRES 10 C 492 LYS ALA SER CYS GLU ALA LYS LYS LYS ALA THR GLY HIS SEQRES 11 C 492 VAL TYR ASP ALA ASN LYS ILE VAL TYR THR VAL LYS VAL SEQRES 12 C 492 GLU PRO HIS THR GLY ASP TYR VAL ALA ALA ASN GLU THR SEQRES 13 C 492 HIS SER GLY ARG LYS THR ALA SER PHE THR VAL SER SER SEQRES 14 C 492 GLU LYS THR ILE LEU THR MET GLY ASP TYR GLY ASP VAL SEQRES 15 C 492 SER LEU LEU CYS ARG VAL ALA SER GLY VAL ASP LEU ALA SEQRES 16 C 492 GLN THR VAL ILE LEU GLU LEU ASP LYS THR SER GLU HIS SEQRES 17 C 492 LEU PRO THR ALA TRP GLN VAL HIS ARG ASP TRP PHE ASN SEQRES 18 C 492 ASP LEU ALA LEU PRO TRP LYS HIS GLU GLY ALA GLN ASN SEQRES 19 C 492 TRP ASN ASN ALA GLU ARG LEU VAL GLU PHE GLY ALA PRO SEQRES 20 C 492 HIS ALA VAL LYS MET ASP VAL TYR ASN LEU GLY ASP HIS SEQRES 21 C 492 THR GLY VAL LEU LEU LYS SER LEU ALA GLY VAL PRO VAL SEQRES 22 C 492 ALA HIS ILE ASP GLY THR LYS TYR HIS LEU LYS SER GLY SEQRES 23 C 492 HIS VAL THR CYS GLU VAL GLY LEU GLU LYS LEU LYS MET SEQRES 24 C 492 LYS GLY LEU THR TYR THR MET CYS ASP LYS THR LYS PHE SEQRES 25 C 492 THR TRP LYS ARG ILE PRO THR ASP SER GLY HIS ASP THR SEQRES 26 C 492 VAL VAL MET GLU VAL ALA PHE SER GLY THR LYS PRO CYS SEQRES 27 C 492 ARG ILE PRO VAL ARG ALA VAL ALA HIS GLY SER PRO ASP SEQRES 28 C 492 VAL ASN VAL ALA MET LEU ILE THR PRO ASN PRO ILE ILE SEQRES 29 C 492 GLU ASN ASN GLY GLY GLY PHE ILE GLU MET GLN LEU PRO SEQRES 30 C 492 PRO GLY ASP ASN ILE ILE TYR VAL GLY GLU LEU SER HIS SEQRES 31 C 492 GLN TRP PHE GLN LYS GLY SER SER ILE GLY ARG VAL PHE SEQRES 32 C 492 GLN LYS THR ARG LYS GLY ILE GLU ARG LEU THR VAL ILE SEQRES 33 C 492 GLY GLU HIS ALA TRP ASP PHE GLY SER ALA GLY GLY PHE SEQRES 34 C 492 LEU THR SER VAL GLY LYS ALA LEU HIS THR VAL LEU GLY SEQRES 35 C 492 GLY ALA PHE ASN SER LEU PHE GLY GLY VAL GLY PHE LEU SEQRES 36 C 492 PRO LYS ILE LEU VAL GLY VAL VAL LEU ALA TRP LEU GLY SEQRES 37 C 492 LEU ASN MET ARG ASN PRO THR MET SER MET SER PHE LEU SEQRES 38 C 492 LEU ALA GLY GLY LEU VAL LEU ALA MET THR LEU SEQRES 1 D 71 VAL LEU ILE PRO SER HIS ALA GLN GLY GLU LEU THR GLY SEQRES 2 D 71 ARG GLY HIS LYS TRP LEU GLU GLY ASP SER LEU ARG THR SEQRES 3 D 71 HIS LEU THR ARG VAL GLU GLY TRP VAL TRP LYS ASN ARG SEQRES 4 D 71 LEU LEU ALA LEU ALA MET VAL THR VAL VAL TRP LEU THR SEQRES 5 D 71 LEU GLU SER VAL VAL THR ARG VAL ALA VAL LEU VAL VAL SEQRES 6 D 71 LEU LEU CYS LEU ALA PRO SEQRES 1 E 71 VAL LEU ILE PRO SER HIS ALA GLN GLY GLU LEU THR GLY SEQRES 2 E 71 ARG GLY HIS LYS TRP LEU GLU GLY ASP SER LEU ARG THR SEQRES 3 E 71 HIS LEU THR ARG VAL GLU GLY TRP VAL TRP LYS ASN ARG SEQRES 4 E 71 LEU LEU ALA LEU ALA MET VAL THR VAL VAL TRP LEU THR SEQRES 5 E 71 LEU GLU SER VAL VAL THR ARG VAL ALA VAL LEU VAL VAL SEQRES 6 E 71 LEU LEU CYS LEU ALA PRO SEQRES 1 F 71 VAL LEU ILE PRO SER HIS ALA GLN GLY GLU LEU THR GLY SEQRES 2 F 71 ARG GLY HIS LYS TRP LEU GLU GLY ASP SER LEU ARG THR SEQRES 3 F 71 HIS LEU THR ARG VAL GLU GLY TRP VAL TRP LYS ASN ARG SEQRES 4 F 71 LEU LEU ALA LEU ALA MET VAL THR VAL VAL TRP LEU THR SEQRES 5 F 71 LEU GLU SER VAL VAL THR ARG VAL ALA VAL LEU VAL VAL SEQRES 6 F 71 LEU LEU CYS LEU ALA PRO HET NAG A 500 14 HET NAG B 500 14 HET NAG C 500 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 7 NAG 3(C8 H15 N O6) HELIX 1 AA1 SER A 1 LEU A 6 5 6 HELIX 2 AA2 LEU A 82 HIS A 86 5 5 HELIX 3 AA3 GLY A 100 HIS A 104 5 5 HELIX 4 AA4 GLY A 177 TYR A 179 5 3 HELIX 5 AA5 VAL A 188 GLY A 191 5 4 HELIX 6 AA6 ARG A 217 ASP A 222 1 6 HELIX 7 AA7 ASN A 237 ARG A 240 5 4 HELIX 8 AA8 HIS A 260 LEU A 268 1 9 HELIX 9 AA9 ALA A 269 VAL A 271 5 3 HELIX 10 AB1 ASP A 308 THR A 310 5 3 HELIX 11 AB2 SER A 397 GLY A 417 1 21 HELIX 12 AB3 GLU A 418 PHE A 423 5 6 HELIX 13 AB4 GLY A 428 LEU A 448 1 21 HELIX 14 AB5 GLY A 453 LEU A 467 1 15 HELIX 15 AB6 ASN A 473 MET A 476 5 4 HELIX 16 AB7 SER A 477 LEU A 492 1 16 HELIX 17 AB8 ARG B 2 LEU B 6 5 5 HELIX 18 AB9 LEU B 82 HIS B 86 5 5 HELIX 19 AC1 GLY B 177 TYR B 179 5 3 HELIX 20 AC2 ARG B 187 GLY B 191 5 5 HELIX 21 AC3 ASP B 193 ALA B 195 5 3 HELIX 22 AC4 ARG B 217 LEU B 223 1 7 HELIX 23 AC5 ASN B 237 ARG B 240 5 4 HELIX 24 AC6 HIS B 260 LEU B 268 1 9 HELIX 25 AC7 SER B 397 GLY B 417 1 21 HELIX 26 AC8 GLU B 418 PHE B 423 5 6 HELIX 27 AC9 GLY B 427 GLY B 450 1 24 HELIX 28 AD1 GLY B 453 MET B 471 1 19 HELIX 29 AD2 PRO B 474 LEU B 492 1 19 HELIX 30 AD3 SER C 1 LEU C 6 5 6 HELIX 31 AD4 LEU C 82 GLN C 87 5 6 HELIX 32 AD5 GLY C 100 HIS C 104 5 5 HELIX 33 AD6 VAL C 188 GLY C 191 5 4 HELIX 34 AD7 ASP C 193 ALA C 195 5 3 HELIX 35 AD8 ARG C 217 ASP C 222 1 6 HELIX 36 AD9 ASN C 237 ARG C 240 5 4 HELIX 37 AE1 HIS C 260 LEU C 268 1 9 HELIX 38 AE2 SER C 397 ALA C 420 1 24 HELIX 39 AE3 GLY C 427 LEU C 448 1 22 HELIX 40 AE4 GLY C 453 ASN C 470 1 18 HELIX 41 AE5 ASN C 473 LEU C 492 1 20 HELIX 42 AE6 LEU D 20 LEU D 52 1 33 HELIX 43 AE7 SER D 56 ALA D 71 1 16 HELIX 44 AE8 ARG E 26 LEU E 54 1 29 HELIX 45 AE9 SER E 56 ALA E 71 1 16 HELIX 46 AF1 SER F 6 GLY F 10 5 5 HELIX 47 AF2 LEU F 20 HIS F 28 1 9 HELIX 48 AF3 LEU F 29 ASN F 39 1 11 HELIX 49 AF4 ASN F 39 LEU F 54 1 16 HELIX 50 AF5 VAL F 58 ALA F 71 1 14 SHEET 1 AA1 5 ARG A 9 GLY A 14 0 SHEET 2 AA1 5 CYS A 30 ALA A 35 1 O THR A 32 N ASP A 10 SHEET 3 AA1 5 MET A 41 GLU A 51 -1 O VAL A 43 N VAL A 31 SHEET 4 AA1 5 VAL A 138 PRO A 145 -1 O LYS A 142 N TRP A 44 SHEET 5 AA1 5 LYS A 161 PHE A 165 -1 O ALA A 163 N VAL A 141 SHEET 1 AA210 ARG A 9 GLY A 14 0 SHEET 2 AA210 CYS A 30 ALA A 35 1 O THR A 32 N ASP A 10 SHEET 3 AA210 MET A 41 GLU A 51 -1 O VAL A 43 N VAL A 31 SHEET 4 AA210 LYS A 280 HIS A 282 -1 O TYR A 281 N GLN A 50 SHEET 5 AA210 VAL A 273 ASP A 277 -1 N ASP A 277 O LYS A 280 SHEET 6 AA210 ALA A 212 HIS A 216 -1 N ALA A 212 O ALA A 274 SHEET 7 AA210 THR A 197 GLU A 201 -1 N LEU A 200 O TRP A 213 SHEET 8 AA210 LYS A 126 VAL A 131 -1 N THR A 128 O GLU A 201 SHEET 9 AA210 ALA A 54 CYS A 60 -1 N THR A 56 O GLY A 129 SHEET 10 AA210 TRP A 227 LYS A 228 -1 O LYS A 228 N GLU A 58 SHEET 1 AA3 4 ARG A 20 GLU A 26 0 SHEET 2 AA3 4 HIS A 287 GLY A 293 -1 O CYS A 290 N LEU A 23 SHEET 3 AA3 4 ASP A 181 CYS A 186 -1 N SER A 183 O GLY A 293 SHEET 4 AA3 4 THR A 172 THR A 175 -1 N THR A 172 O LEU A 184 SHEET 1 AA4 3 ALA A 63 ARG A 73 0 SHEET 2 AA4 3 GLY A 109 CYS A 121 -1 O SER A 120 N LYS A 64 SHEET 3 AA4 3 THR A 90 ARG A 99 -1 N ASP A 95 O ILE A 113 SHEET 1 AA5 2 VAL A 242 PHE A 244 0 SHEET 2 AA5 2 VAL A 254 ASN A 256 -1 O TYR A 255 N GLU A 243 SHEET 1 AA6 4 PHE A 312 ASP A 320 0 SHEET 2 AA6 4 VAL A 326 PHE A 332 -1 O ALA A 331 N THR A 313 SHEET 3 AA6 4 PHE A 371 GLN A 375 -1 O MET A 374 N VAL A 326 SHEET 4 AA6 4 MET A 356 LEU A 357 -1 N MET A 356 O GLN A 375 SHEET 1 AA7 3 CYS A 338 ARG A 339 0 SHEET 2 AA7 3 ILE A 363 GLU A 365 -1 O ILE A 364 N CYS A 338 SHEET 3 AA7 3 GLY A 368 GLY A 369 -1 O GLY A 368 N GLU A 365 SHEET 1 AA8 3 VAL A 342 ALA A 344 0 SHEET 2 AA8 3 ILE A 383 VAL A 385 -1 O TYR A 384 N ARG A 343 SHEET 3 AA8 3 LEU A 388 HIS A 390 -1 O HIS A 390 N ILE A 383 SHEET 1 AA9 2 GLY A 379 ASP A 380 0 SHEET 2 AA9 2 PHE A 393 GLN A 394 -1 O GLN A 394 N GLY A 379 SHEET 1 AB1 5 ARG B 9 ASP B 10 0 SHEET 2 AB1 5 CYS B 30 ALA B 35 1 O CYS B 30 N ASP B 10 SHEET 3 AB1 5 MET B 41 GLU B 51 -1 O VAL B 43 N VAL B 31 SHEET 4 AB1 5 VAL B 138 PRO B 145 -1 O GLU B 144 N ASP B 42 SHEET 5 AB1 5 LYS B 161 PHE B 165 -1 O ALA B 163 N VAL B 141 SHEET 1 AB2 5 THR B 13 GLY B 14 0 SHEET 2 AB2 5 CYS B 30 ALA B 35 1 O THR B 34 N GLY B 14 SHEET 3 AB2 5 MET B 41 GLU B 51 -1 O VAL B 43 N VAL B 31 SHEET 4 AB2 5 LYS B 280 HIS B 282 -1 O TYR B 281 N GLN B 50 SHEET 5 AB2 5 HIS B 275 ASP B 277 -1 N ASP B 277 O LYS B 280 SHEET 1 AB3 4 VAL B 21 VAL B 24 0 SHEET 2 AB3 4 THR B 289 GLY B 293 -1 O VAL B 292 N VAL B 21 SHEET 3 AB3 4 ASP B 181 LEU B 185 -1 N SER B 183 O GLY B 293 SHEET 4 AB3 4 THR B 172 THR B 175 -1 N THR B 172 O LEU B 184 SHEET 1 AB4 5 ALA B 212 HIS B 216 0 SHEET 2 AB4 5 THR B 197 LEU B 202 -1 N VAL B 198 O VAL B 215 SHEET 3 AB4 5 LYS B 126 HIS B 130 -1 N THR B 128 O GLU B 201 SHEET 4 AB4 5 LYS B 55 CYS B 60 -1 N THR B 56 O GLY B 129 SHEET 5 AB4 5 TRP B 227 LYS B 228 -1 O LYS B 228 N GLU B 58 SHEET 1 AB5 3 ALA B 63 ALA B 72 0 SHEET 2 AB5 3 GLY B 109 CYS B 121 -1 O SER B 120 N LYS B 64 SHEET 3 AB5 3 THR B 90 ARG B 99 -1 N ASP B 95 O ILE B 113 SHEET 1 AB6 2 VAL B 242 PHE B 244 0 SHEET 2 AB6 2 VAL B 254 ASN B 256 -1 O TYR B 255 N GLU B 243 SHEET 1 AB7 4 PHE B 312 ASP B 320 0 SHEET 2 AB7 4 VAL B 326 PHE B 332 -1 O GLU B 329 N ARG B 316 SHEET 3 AB7 4 PHE B 371 GLN B 375 -1 O MET B 374 N VAL B 326 SHEET 4 AB7 4 MET B 356 LEU B 357 -1 N MET B 356 O GLN B 375 SHEET 1 AB8 3 CYS B 338 ARG B 339 0 SHEET 2 AB8 3 ILE B 363 GLU B 365 -1 O ILE B 364 N CYS B 338 SHEET 3 AB8 3 GLY B 368 GLY B 369 -1 O GLY B 368 N GLU B 365 SHEET 1 AB9 3 VAL B 342 ALA B 346 0 SHEET 2 AB9 3 GLY B 379 VAL B 385 -1 O TYR B 384 N ARG B 343 SHEET 3 AB9 3 LEU B 388 GLN B 394 -1 O HIS B 390 N ILE B 383 SHEET 1 AC1 5 ARG C 9 GLY C 14 0 SHEET 2 AC1 5 CYS C 30 ALA C 35 1 O THR C 32 N ASP C 10 SHEET 3 AC1 5 LYS C 38 GLU C 51 -1 O VAL C 43 N VAL C 31 SHEET 4 AC1 5 VAL C 138 PRO C 145 -1 O LYS C 142 N TRP C 44 SHEET 5 AC1 5 LYS C 161 PHE C 165 -1 O LYS C 161 N VAL C 143 SHEET 1 AC210 ARG C 9 GLY C 14 0 SHEET 2 AC210 CYS C 30 ALA C 35 1 O THR C 32 N ASP C 10 SHEET 3 AC210 LYS C 38 GLU C 51 -1 O VAL C 43 N VAL C 31 SHEET 4 AC210 LYS C 280 HIS C 282 -1 O TYR C 281 N GLN C 50 SHEET 5 AC210 VAL C 273 ASP C 277 -1 N ASP C 277 O LYS C 280 SHEET 6 AC210 ALA C 212 HIS C 216 -1 N ALA C 212 O ALA C 274 SHEET 7 AC210 THR C 197 LEU C 202 -1 N VAL C 198 O VAL C 215 SHEET 8 AC210 LYS C 126 VAL C 131 -1 N THR C 128 O GLU C 201 SHEET 9 AC210 ALA C 54 CYS C 60 -1 N THR C 56 O GLY C 129 SHEET 10 AC210 TRP C 227 LYS C 228 -1 O LYS C 228 N GLU C 58 SHEET 1 AC3 3 ARG C 20 GLU C 26 0 SHEET 2 AC3 3 HIS C 287 GLY C 293 -1 O CYS C 290 N LEU C 23 SHEET 3 AC3 3 CYS C 186 ARG C 187 -1 N ARG C 187 O THR C 289 SHEET 1 AC4 3 ALA C 63 ALA C 72 0 SHEET 2 AC4 3 GLY C 109 CYS C 121 -1 O LYS C 118 N SER C 66 SHEET 3 AC4 3 THR C 90 ARG C 99 -1 N ARG C 99 O GLY C 109 SHEET 1 AC5 2 THR C 172 GLY C 177 0 SHEET 2 AC5 2 GLY C 180 LEU C 184 -1 O VAL C 182 N LEU C 174 SHEET 1 AC6 2 VAL C 242 PHE C 244 0 SHEET 2 AC6 2 VAL C 254 ASN C 256 -1 O TYR C 255 N GLU C 243 SHEET 1 AC7 4 PHE C 312 ASP C 320 0 SHEET 2 AC7 4 VAL C 326 PHE C 332 -1 O ALA C 331 N THR C 313 SHEET 3 AC7 4 PHE C 371 GLN C 375 -1 O ILE C 372 N MET C 328 SHEET 4 AC7 4 MET C 356 LEU C 357 -1 N MET C 356 O GLN C 375 SHEET 1 AC8 2 CYS C 338 ARG C 339 0 SHEET 2 AC8 2 ILE C 363 ILE C 364 -1 O ILE C 364 N CYS C 338 SHEET 1 AC9 3 VAL C 342 ALA C 346 0 SHEET 2 AC9 3 GLY C 379 VAL C 385 -1 O TYR C 384 N ARG C 343 SHEET 3 AC9 3 LEU C 388 GLN C 394 -1 O LEU C 388 N VAL C 385 SSBOND 1 CYS A 3 CYS A 30 1555 1555 2.03 SSBOND 2 CYS A 60 CYS A 121 1555 1555 2.03 SSBOND 3 CYS A 74 CYS A 105 1555 1555 2.04 SSBOND 4 CYS A 92 CYS A 116 1555 1555 2.03 SSBOND 5 CYS A 186 CYS A 290 1555 1555 2.03 SSBOND 6 CYS A 307 CYS A 338 1555 1555 2.02 SSBOND 7 CYS B 3 CYS B 30 1555 1555 2.03 SSBOND 8 CYS B 60 CYS B 121 1555 1555 2.03 SSBOND 9 CYS B 74 CYS B 105 1555 1555 2.04 SSBOND 10 CYS B 92 CYS B 116 1555 1555 2.03 SSBOND 11 CYS B 186 CYS B 290 1555 1555 2.03 SSBOND 12 CYS B 307 CYS B 338 1555 1555 2.03 SSBOND 13 CYS C 3 CYS C 30 1555 1555 2.03 SSBOND 14 CYS C 60 CYS C 121 1555 1555 2.03 SSBOND 15 CYS C 74 CYS C 105 1555 1555 2.04 SSBOND 16 CYS C 92 CYS C 116 1555 1555 2.03 SSBOND 17 CYS C 186 CYS C 290 1555 1555 2.03 SSBOND 18 CYS C 307 CYS C 338 1555 1555 2.02 LINK ND2 ASN A 154 C1 NAG A 500 1555 1555 1.43 LINK ND2 ASN B 154 C1 NAG B 500 1555 1555 1.44 LINK ND2 ASN C 154 C1 NAG C 500 1555 1555 1.44 CISPEP 1 LYS A 336 PRO A 337 0 6.33 CISPEP 2 LYS B 336 PRO B 337 0 -6.07 CISPEP 3 LYS C 336 PRO C 337 0 -9.08 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000