HEADER HYDROLASE 09-OCT-23 8QRJ TITLE LCC-ICCG PETASE MUTANT H218Y COMPND MOL_ID: 1; COMPND 2 MOLECULE: LEAF-BRANCH COMPOST CUTINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED PROKARYOTIC ORGANISM; SOURCE 3 ORGANISM_TAXID: 2725; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LCC, PETASE, HYDROLASE, DIRECT ENZYME EVOLUTION EXPDTA X-RAY DIFFRACTION AUTHOR G.ORR,Y.NIV,M.BARAKAT,A.BOGINYA,M.DESSAU,L.AFRIAT-JURNOU REVDAT 2 20-NOV-24 8QRJ 1 REMARK REVDAT 1 18-SEP-24 8QRJ 0 JRNL AUTH G.ORR,Y.NIV,M.BARAKAT,A.BOGINYA,M.DESSAU,L.AFRIAT-JURNOU JRNL TITL STREAMLINED SCREENING OF EXTRACELLULARLY EXPRESSED PETASE JRNL TITL 2 LIBRARIES FOR IMPROVED POLYETHYLENE TEREPHTHALATE JRNL TITL 3 DEGRADATION. JRNL REF BIOTECHNOL J V. 19 00021 2024 JRNL REFN ESSN 1860-7314 JRNL PMID 38987219 JRNL DOI 10.1002/BIOT.202400021 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.20.1_4487: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 56565 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2868 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1700 - 3.8500 0.95 2851 146 0.1377 0.1273 REMARK 3 2 3.8500 - 3.0600 0.93 2716 125 0.1398 0.1426 REMARK 3 3 3.0600 - 2.6700 0.95 2701 154 0.1506 0.1793 REMARK 3 4 2.6700 - 2.4300 0.94 2658 162 0.1498 0.1732 REMARK 3 5 2.4300 - 2.2500 0.96 2710 153 0.1442 0.1456 REMARK 3 6 2.2500 - 2.1200 0.96 2724 136 0.1373 0.1564 REMARK 3 7 2.1200 - 2.0200 0.96 2714 146 0.1459 0.1744 REMARK 3 8 2.0100 - 1.9300 0.96 2701 148 0.1615 0.1850 REMARK 3 9 1.9300 - 1.8500 0.97 2724 144 0.1713 0.2018 REMARK 3 10 1.8500 - 1.7900 0.96 2698 132 0.1718 0.1797 REMARK 3 11 1.7900 - 1.7300 0.97 2729 142 0.1814 0.2217 REMARK 3 12 1.7300 - 1.6800 0.97 2704 149 0.1977 0.2056 REMARK 3 13 1.6800 - 1.6400 0.94 2625 150 0.2174 0.2567 REMARK 3 14 1.6400 - 1.6000 0.95 2653 140 0.2352 0.2693 REMARK 3 15 1.6000 - 1.5600 0.96 2693 143 0.2447 0.2669 REMARK 3 16 1.5600 - 1.5300 0.94 2628 144 0.2480 0.2592 REMARK 3 17 1.5300 - 1.5000 0.93 2601 137 0.2588 0.2631 REMARK 3 18 1.5000 - 1.4700 0.93 2599 153 0.2696 0.3125 REMARK 3 19 1.4400 - 1.4200 0.95 2631 134 0.3076 0.3559 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.930 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2046 REMARK 3 ANGLE : 0.826 2799 REMARK 3 CHIRALITY : 0.078 315 REMARK 3 PLANARITY : 0.010 365 REMARK 3 DIHEDRAL : 11.490 738 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4305 25.6475 23.3517 REMARK 3 T TENSOR REMARK 3 T11: 0.0916 T22: 0.1026 REMARK 3 T33: 0.0922 T12: 0.0099 REMARK 3 T13: 0.0005 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 1.1431 L22: 1.7911 REMARK 3 L33: 1.4497 L12: -0.1389 REMARK 3 L13: -0.0013 L23: 0.3859 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: 0.0169 S13: 0.0950 REMARK 3 S21: -0.0649 S22: -0.0028 S23: 0.0721 REMARK 3 S31: -0.0448 S32: -0.0395 S33: -0.0060 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8365 16.4551 29.2542 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1214 REMARK 3 T33: 0.1059 T12: 0.0020 REMARK 3 T13: 0.0006 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.7378 L22: 2.7892 REMARK 3 L33: 0.8028 L12: -0.3049 REMARK 3 L13: 0.2825 L23: -0.9622 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: 0.0114 S13: -0.0037 REMARK 3 S21: 0.0319 S22: 0.0609 S23: 0.1670 REMARK 3 S31: 0.0269 S32: -0.1076 S33: -0.0797 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 113 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3844 10.0078 26.5078 REMARK 3 T TENSOR REMARK 3 T11: 0.1143 T22: 0.1100 REMARK 3 T33: 0.1129 T12: 0.0002 REMARK 3 T13: 0.0013 T23: 0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.2354 L22: 7.8782 REMARK 3 L33: 1.3097 L12: -0.1130 REMARK 3 L13: 0.2802 L23: -2.0080 REMARK 3 S TENSOR REMARK 3 S11: 0.0377 S12: -0.0196 S13: -0.0468 REMARK 3 S21: -0.1029 S22: 0.0308 S23: 0.2383 REMARK 3 S31: 0.1546 S32: -0.0633 S33: -0.0794 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4081 16.6967 21.7311 REMARK 3 T TENSOR REMARK 3 T11: 0.1066 T22: 0.1292 REMARK 3 T33: 0.1137 T12: 0.0060 REMARK 3 T13: -0.0038 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.2709 L22: 1.2247 REMARK 3 L33: 0.5514 L12: 0.3191 REMARK 3 L13: -0.3830 L23: -0.3555 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: 0.0165 S13: -0.0150 REMARK 3 S21: -0.0723 S22: -0.0359 S23: -0.0251 REMARK 3 S31: 0.0208 S32: 0.0186 S33: 0.0257 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 159 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2367 14.4275 42.0210 REMARK 3 T TENSOR REMARK 3 T11: 0.0958 T22: 0.0993 REMARK 3 T33: 0.1077 T12: 0.0044 REMARK 3 T13: -0.0046 T23: 0.0028 REMARK 3 L TENSOR REMARK 3 L11: 0.9619 L22: 0.8518 REMARK 3 L33: 1.5944 L12: 0.0529 REMARK 3 L13: -0.5955 L23: -0.0637 REMARK 3 S TENSOR REMARK 3 S11: -0.0034 S12: -0.0673 S13: -0.0189 REMARK 3 S21: 0.0612 S22: -0.0036 S23: -0.0332 REMARK 3 S31: 0.0685 S32: 0.0955 S33: 0.0139 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0059 15.9893 40.8143 REMARK 3 T TENSOR REMARK 3 T11: 0.0732 T22: 0.1128 REMARK 3 T33: 0.1320 T12: -0.0113 REMARK 3 T13: 0.0107 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.7408 L22: 1.8108 REMARK 3 L33: 2.6709 L12: 0.3195 REMARK 3 L13: 0.3545 L23: -0.0077 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.0575 S13: 0.1307 REMARK 3 S21: -0.0309 S22: -0.0217 S23: 0.1116 REMARK 3 S31: 0.0836 S32: -0.2210 S33: -0.0054 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.5148 29.2065 41.9501 REMARK 3 T TENSOR REMARK 3 T11: 0.1162 T22: 0.1074 REMARK 3 T33: 0.1169 T12: -0.0062 REMARK 3 T13: 0.0120 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.6051 L22: 0.8719 REMARK 3 L33: 2.2565 L12: 0.2911 REMARK 3 L13: -0.7132 L23: -0.6465 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: -0.0962 S13: 0.1067 REMARK 3 S21: 0.0920 S22: -0.0367 S23: -0.0190 REMARK 3 S31: -0.2223 S32: 0.1221 S33: -0.0578 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8QRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1292133744. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 93953 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 82.0 REMARK 200 DATA REDUNDANCY : 1.770 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 4.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.46 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.89400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M NA-FORMATE PH=7.3, REMARK 280 PH 7.3, VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.47500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.47500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.95000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.95000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 40.47500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.95000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.25500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 40.47500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.95000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.25500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 682 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLY A 3 REMARK 465 VAL A 4 REMARK 465 LEU A 5 REMARK 465 TRP A 6 REMARK 465 ARG A 7 REMARK 465 VAL A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 LEU A 13 REMARK 465 MET A 14 REMARK 465 ALA A 15 REMARK 465 ALA A 16 REMARK 465 LEU A 17 REMARK 465 LEU A 18 REMARK 465 ALA A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 TRP A 23 REMARK 465 ALA A 24 REMARK 465 LEU A 25 REMARK 465 VAL A 26 REMARK 465 TRP A 27 REMARK 465 ALA A 28 REMARK 465 SER A 29 REMARK 465 PRO A 30 REMARK 465 SER A 31 REMARK 465 VAL A 32 REMARK 465 GLU A 33 REMARK 465 ALA A 34 REMARK 465 GLN A 35 REMARK 465 GLN A 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 808 O HOH A 827 1.87 REMARK 500 O HOH A 769 O HOH A 804 1.91 REMARK 500 O HOH A 414 O HOH A 441 1.93 REMARK 500 O HOH A 575 O HOH A 615 1.99 REMARK 500 O HOH A 703 O HOH A 753 2.01 REMARK 500 O HOH A 686 O HOH A 721 2.04 REMARK 500 O HOH A 683 O HOH A 821 2.06 REMARK 500 O HOH A 516 O HOH A 768 2.06 REMARK 500 O HOH A 618 O HOH A 641 2.07 REMARK 500 O HOH A 602 O HOH A 805 2.09 REMARK 500 O HOH A 528 O HOH A 553 2.12 REMARK 500 O HOH A 441 O HOH A 732 2.13 REMARK 500 NH1 ARG A 107 O HOH A 401 2.16 REMARK 500 O HOH A 702 O HOH A 706 2.16 REMARK 500 O HOH A 738 O HOH A 769 2.16 REMARK 500 O HOH A 760 O HOH A 834 2.17 REMARK 500 O HOH A 571 O HOH A 707 2.18 REMARK 500 O HOH A 777 O HOH A 794 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 599 O HOH A 599 4556 1.94 REMARK 500 O HOH A 618 O HOH A 781 6554 2.17 REMARK 500 O HOH A 545 O HOH A 687 4556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 96 -3.80 71.35 REMARK 500 SER A 165 -122.52 64.27 REMARK 500 THR A 188 58.28 33.65 REMARK 500 TYR A 218 -82.35 -124.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 837 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A 838 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 839 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 840 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH A 841 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 842 DISTANCE = 6.28 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG A 65 O REMARK 620 2 VAL A 68 O 83.0 REMARK 620 3 PHE A 71 O 106.8 96.4 REMARK 620 4 HOH A 516 O 177.9 95.9 71.5 REMARK 620 5 HOH A 542 O 108.1 166.4 73.2 72.7 REMARK 620 6 HOH A 702 O 112.6 78.8 139.2 68.8 103.2 REMARK 620 7 HOH A 706 O 81.7 106.9 156.1 100.3 82.9 45.2 REMARK 620 N 1 2 3 4 5 6 DBREF 8QRJ A 1 293 UNP G9BY57 PETH_UNKP 1 293 SEQADV 8QRJ GLY A 127 UNP G9BY57 TYR 127 CONFLICT SEQADV 8QRJ TYR A 218 UNP G9BY57 HIS 218 ENGINEERED MUTATION SEQADV 8QRJ CYS A 238 UNP G9BY57 ASP 238 CONFLICT SEQADV 8QRJ ILE A 243 UNP G9BY57 PHE 243 CONFLICT SEQADV 8QRJ CYS A 283 UNP G9BY57 SER 283 CONFLICT SEQRES 1 A 293 MET ASP GLY VAL LEU TRP ARG VAL ARG THR ALA ALA LEU SEQRES 2 A 293 MET ALA ALA LEU LEU ALA LEU ALA ALA TRP ALA LEU VAL SEQRES 3 A 293 TRP ALA SER PRO SER VAL GLU ALA GLN SER ASN PRO TYR SEQRES 4 A 293 GLN ARG GLY PRO ASN PRO THR ARG SER ALA LEU THR ALA SEQRES 5 A 293 ASP GLY PRO PHE SER VAL ALA THR TYR THR VAL SER ARG SEQRES 6 A 293 LEU SER VAL SER GLY PHE GLY GLY GLY VAL ILE TYR TYR SEQRES 7 A 293 PRO THR GLY THR SER LEU THR PHE GLY GLY ILE ALA MET SEQRES 8 A 293 SER PRO GLY TYR THR ALA ASP ALA SER SER LEU ALA TRP SEQRES 9 A 293 LEU GLY ARG ARG LEU ALA SER HIS GLY PHE VAL VAL LEU SEQRES 10 A 293 VAL ILE ASN THR ASN SER ARG PHE ASP GLY PRO ASP SER SEQRES 11 A 293 ARG ALA SER GLN LEU SER ALA ALA LEU ASN TYR LEU ARG SEQRES 12 A 293 THR SER SER PRO SER ALA VAL ARG ALA ARG LEU ASP ALA SEQRES 13 A 293 ASN ARG LEU ALA VAL ALA GLY HIS SER MET GLY GLY GLY SEQRES 14 A 293 GLY THR LEU ARG ILE ALA GLU GLN ASN PRO SER LEU LYS SEQRES 15 A 293 ALA ALA VAL PRO LEU THR PRO TRP HIS THR ASP LYS THR SEQRES 16 A 293 PHE ASN THR SER VAL PRO VAL LEU ILE VAL GLY ALA GLU SEQRES 17 A 293 ALA ASP THR VAL ALA PRO VAL SER GLN TYR ALA ILE PRO SEQRES 18 A 293 PHE TYR GLN ASN LEU PRO SER THR THR PRO LYS VAL TYR SEQRES 19 A 293 VAL GLU LEU CYS ASN ALA SER HIS ILE ALA PRO ASN SER SEQRES 20 A 293 ASN ASN ALA ALA ILE SER VAL TYR THR ILE SER TRP MET SEQRES 21 A 293 LYS LEU TRP VAL ASP ASN ASP THR ARG TYR ARG GLN PHE SEQRES 22 A 293 LEU CYS ASN VAL ASN ASP PRO ALA LEU CYS ASP PHE ARG SEQRES 23 A 293 THR ASN ASN ARG HIS CYS GLN HET EDO A 301 4 HET P33 A 302 22 HET CA A 303 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL HETNAM CA CALCIUM ION HETSYN EDO ETHYLENE GLYCOL HETSYN P33 HEPTAETHYLENE GLYCOL; PEG330 FORMUL 2 EDO C2 H6 O2 FORMUL 3 P33 C14 H30 O8 FORMUL 4 CA CA 2+ FORMUL 5 HOH *442(H2 O) HELIX 1 AA1 ARG A 47 ALA A 52 5 6 HELIX 2 AA2 SER A 64 VAL A 68 5 5 HELIX 3 AA3 ASP A 98 SER A 101 5 4 HELIX 4 AA4 LEU A 102 HIS A 112 1 11 HELIX 5 AA5 GLY A 127 SER A 145 1 19 HELIX 6 AA6 PRO A 147 ARG A 153 1 7 HELIX 7 AA7 SER A 165 ASN A 178 1 14 HELIX 8 AA8 TYR A 218 LEU A 226 1 9 HELIX 9 AA9 ILE A 243 SER A 247 5 5 HELIX 10 AB1 ASN A 249 ASP A 265 1 17 HELIX 11 AB2 ASP A 267 LEU A 274 5 8 SHEET 1 AA1 6 SER A 57 VAL A 63 0 SHEET 2 AA1 6 GLY A 74 THR A 80 -1 O ILE A 76 N TYR A 61 SHEET 3 AA1 6 VAL A 115 ILE A 119 -1 O VAL A 116 N TYR A 77 SHEET 4 AA1 6 PHE A 86 SER A 92 1 N ILE A 89 O LEU A 117 SHEET 5 AA1 6 LEU A 154 HIS A 164 1 O ASP A 155 N PHE A 86 SHEET 6 AA1 6 ALA A 184 LEU A 187 1 O LEU A 187 N GLY A 163 SHEET 1 AA2 3 VAL A 202 ALA A 207 0 SHEET 2 AA2 3 LYS A 232 LEU A 237 1 O VAL A 235 N GLY A 206 SHEET 3 AA2 3 LEU A 282 THR A 287 -1 O CYS A 283 N GLU A 236 SSBOND 1 CYS A 238 CYS A 283 1555 1555 2.07 SSBOND 2 CYS A 275 CYS A 292 1555 1555 2.05 LINK O ARG A 65 CA CA A 303 1555 1555 2.65 LINK O VAL A 68 CA CA A 303 1555 1555 2.69 LINK O PHE A 71 CA CA A 303 1555 1555 2.77 LINK CA CA A 303 O HOH A 516 1555 1555 2.92 LINK CA CA A 303 O HOH A 542 1555 1555 2.84 LINK CA CA A 303 O HOH A 702 1555 1555 2.80 LINK CA CA A 303 O HOH A 706 1555 1555 2.82 CRYST1 81.900 94.510 80.950 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012210 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012353 0.00000