HEADER OXIDOREDUCTASE 20-OCT-23 8QWT TITLE LIGNINOLYTIC MANGANESE PEROXIDASE CST-MNP1 FROM AGARICALES MUSHROOMS TITLE 2 IN COMPLEX WITH A MANGANESE ION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXIDASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MANGANESE PEROXIDASE; COMPND 5 EC: 1.11.1.13; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CYATHUS STRIATUS; SOURCE 3 ORGANISM_TAXID: 68777; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MANGANESE PEROXIDASE, FUNGAL, LIGNINOLYTIC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.SANTILLANA,A.ROMERO REVDAT 1 26-JUN-24 8QWT 0 JRNL AUTH M.I.SANCHEZ-RUIZ,E.SANTILLANA,D.LINDE,A.ROMERO,A.T.MARTINEZ, JRNL AUTH 2 F.J.RUIZ-DUENAS JRNL TITL STRUCTURE-FUNCTION CHARACTERIZATION OF TWO ENZYMES FROM JRNL TITL 2 NOVEL SUBFAMILIES OF MANGANESE PEROXIDASES SECRETED BY THE JRNL TITL 3 LIGNOCELLULOSE-DEGRADING AGARICALES FUNGI AGROCYBE PEDIADES JRNL TITL 4 AND CYATHUS STRIATUS. JRNL REF BIOTECHNOL BIOFUELS BIOPROD V. 17 74 2024 JRNL REFN ISSN 2731-3654 JRNL PMID 38824538 JRNL DOI 10.1186/S13068-024-02517-1 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 48336 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.031 REMARK 3 FREE R VALUE TEST SET COUNT : 2432 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3341 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2840 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.2940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2415 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 104 REMARK 3 SOLVENT ATOMS : 170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.36200 REMARK 3 B22 (A**2) : -1.68800 REMARK 3 B33 (A**2) : -0.67400 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.070 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.058 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.666 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2581 ; 0.010 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2377 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3527 ; 1.863 ; 1.824 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5492 ; 0.671 ; 1.765 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 5.881 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 10 ; 6.737 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 343 ;11.107 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 394 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3047 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 563 ; 0.011 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 602 ; 0.240 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 89 ; 0.280 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1329 ; 0.180 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 139 ; 0.204 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 5 ; 0.086 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1327 ; 1.629 ; 1.641 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1327 ; 1.628 ; 1.641 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1658 ; 2.387 ; 2.946 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1659 ; 2.388 ; 2.948 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1254 ; 2.344 ; 1.880 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1254 ; 2.341 ; 1.880 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1867 ; 3.422 ; 3.308 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1868 ; 3.422 ; 3.309 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8QWT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-OCT-23. REMARK 100 THE DEPOSITION ID IS D_1292134175. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97926 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48414 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 56.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.14700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 8000, 0,1 M TRIS-HCL, PH 7, REMARK 280 0,3M MGCL2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.89500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.75500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.32000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.75500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.89500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.32000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C7 PG4 A 409 O1 PG4 A 412 2554 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 55 -60.64 -101.10 REMARK 500 PHE A 69 45.09 -104.39 REMARK 500 ALA A 290 -77.86 -102.37 REMARK 500 SER A 298 -17.64 91.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 A 412 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 407 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 OD2 REMARK 620 2 GLU A 37 OE1 96.7 REMARK 620 3 GLU A 37 OE2 116.3 54.0 REMARK 620 4 SER A 331 OG 152.1 111.2 80.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 36 OE1 REMARK 620 2 ASP A 176 OD2 101.5 REMARK 620 3 HEM A 401 O1D 90.9 161.0 REMARK 620 4 HOH A 507 O 175.7 82.4 84.8 REMARK 620 5 HOH A 509 O 93.2 87.7 106.1 88.7 REMARK 620 6 HOH A 547 O 83.7 90.0 77.0 94.6 175.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 48 O REMARK 620 2 ASP A 48 OD1 83.2 REMARK 620 3 GLY A 61 O 70.5 97.0 REMARK 620 4 ASP A 63 OD1 138.8 86.8 71.2 REMARK 620 5 SER A 65 OG 143.9 91.2 145.6 76.0 REMARK 620 6 HOH A 552 O 98.3 172.6 90.4 96.6 83.3 REMARK 620 7 HOH A 579 O 73.3 89.7 142.0 146.6 71.0 83.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 170 NE2 REMARK 620 2 HEM A 401 NA 99.7 REMARK 620 3 HEM A 401 NB 95.1 86.2 REMARK 620 4 HEM A 401 NC 92.5 167.4 89.6 REMARK 620 5 HEM A 401 ND 96.1 91.0 168.8 90.8 REMARK 620 6 HOH A 631 O 177.7 81.6 83.2 86.1 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 171 O REMARK 620 2 THR A 171 OG1 73.8 REMARK 620 3 ASP A 188 OD1 77.1 117.5 REMARK 620 4 ASP A 188 OD2 89.6 75.9 49.8 REMARK 620 5 THR A 190 O 85.0 150.6 75.9 125.1 REMARK 620 6 THR A 190 OG1 147.2 136.2 76.0 87.2 70.5 REMARK 620 7 THR A 193 O 87.0 82.8 148.4 158.5 75.7 106.9 REMARK 620 8 ASP A 195 OD1 141.2 68.8 129.9 91.1 124.7 71.5 78.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 239 O REMARK 620 2 HOH A 639 O 112.0 REMARK 620 N 1 DBREF 8QWT A 1 331 PDB 8QWT 8QWT 1 331 SEQRES 1 A 331 VAL THR CYS PRO ASP GLY HIS VAL THR ALA ASN ARG ALA SEQRES 2 A 331 CYS CYS ALA LEU PHE PRO VAL VAL GLN ASN LEU GLN GLU SEQRES 3 A 331 ASN LEU PHE ASP GLY GLY GLU CYS GLY GLU GLU ALA HIS SEQRES 4 A 331 SER ALA LEU ARG LEU SER PHE HIS ASP ALA ILE GLY PHE SEQRES 5 A 331 SER LEU ASN SER ASN LYS GLY GLY GLY ALA ASP GLY SER SEQRES 6 A 331 ILE LEU LEU PHE ASN ALA THR GLU LEU THR PHE HIS ALA SEQRES 7 A 331 ASN GLY GLY ILE ASP ASP ILE THR SER ARG GLN PHE PRO SEQRES 8 A 331 VAL PHE GLU THR THR GLY LEU THR PRO GLY ASP PHE VAL SEQRES 9 A 331 HIS LEU ALA GLY ALA VAL GLY THR ALA ASN CYS PRO GLY SEQRES 10 A 331 ALA PRO ARG LEU GLN PHE MET PHE GLY ARG PRO PRO PRO SEQRES 11 A 331 ILE ALA PRO ALA PRO ASP LEU THR VAL PRO GLU PRO THR SEQRES 12 A 331 ASP ASP VAL ASP ALA ILE LEU ALA ARG PHE ALA ASP ALA SEQRES 13 A 331 GLY PHE ASP ALA SER GLU VAL VAL ALA LEU LEU SER SER SEQRES 14 A 331 HIS THR ILE ALA ALA ALA ASP VAL VAL ASP VAL THR ILE SEQRES 15 A 331 PRO GLY THR PRO PHE ASP SER THR VAL GLY THR PHE ASP SEQRES 16 A 331 THR GLN VAL PHE LEU GLU VAL LEU LEU ALA GLY ARG SER SEQRES 17 A 331 PHE PRO GLY ASN GLY SER GLN PRO GLY GLU VAL LEU SER SEQRES 18 A 331 PRO LEU ALA GLY GLU MET ARG LEU GLN SER ASP PHE VAL SEQRES 19 A 331 VAL SER ARG ASP SER ARG THR ALA CYS LEU TRP GLN ALA SEQRES 20 A 331 MET VAL ASN ASN GLN GLN LEU MET VAL SER SER PHE ALA SEQRES 21 A 331 ALA ALA MET ALA LYS LEU GLN VAL LEU GLY GLN ASN VAL SEQRES 22 A 331 ASN THR MET VAL ASP CYS SER ASP VAL ILE PRO GLU PRO SEQRES 23 A 331 ALA PRO PHE ALA GLY PRO ILE LYS PHE PRO ALA SER PHE SEQRES 24 A 331 SER MET ALA ASP VAL GLU GLN ALA CYS ALA SER THR PHE SEQRES 25 A 331 PRO GLN ILE GLN THR VAL ALA GLY PRO ALA PRO THR VAL SEQRES 26 A 331 ALA PRO VAL PRO GLY SER HET HEM A 401 43 HET MN A 402 1 HET CA A 403 1 HET CA A 404 1 HET MG A 405 1 HET MG A 406 1 HET MG A 407 1 HET PG4 A 408 13 HET PG4 A 409 13 HET PG4 A 410 13 HET GOL A 411 6 HET PG4 A 412 10 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM MN MANGANESE (II) ION HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM GOL GLYCEROL HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 MN MN 2+ FORMUL 4 CA 2(CA 2+) FORMUL 6 MG 3(MG 2+) FORMUL 9 PG4 4(C8 H18 O5) FORMUL 12 GOL C3 H8 O3 FORMUL 14 HOH *170(H2 O) HELIX 1 AA1 ASN A 11 CYS A 15 5 5 HELIX 2 AA2 ALA A 16 LEU A 28 1 13 HELIX 3 AA3 GLY A 35 ILE A 50 1 16 HELIX 4 AA4 GLY A 64 PHE A 69 1 6 HELIX 5 AA5 PHE A 69 LEU A 74 1 6 HELIX 6 AA6 THR A 75 GLY A 80 5 6 HELIX 7 AA7 GLY A 81 GLU A 94 1 14 HELIX 8 AA8 THR A 99 ASN A 114 1 16 HELIX 9 AA9 ASP A 145 GLY A 157 1 13 HELIX 10 AB1 ASP A 159 SER A 168 1 10 HELIX 11 AB2 SER A 169 ILE A 172 5 4 HELIX 12 AB3 THR A 196 LEU A 204 1 9 HELIX 13 AB4 GLN A 230 ASP A 238 1 9 HELIX 14 AB5 THR A 241 VAL A 249 1 9 HELIX 15 AB6 ASN A 251 GLN A 267 1 17 HELIX 16 AB7 ASN A 272 MET A 276 5 5 HELIX 17 AB8 SER A 280 ILE A 283 5 4 HELIX 18 AB9 SER A 300 VAL A 304 5 5 SHEET 1 AA1 2 MET A 124 PHE A 125 0 SHEET 2 AA1 2 VAL A 277 ASP A 278 -1 O VAL A 277 N PHE A 125 SHEET 1 AA2 2 ALA A 174 ALA A 175 0 SHEET 2 AA2 2 THR A 185 PRO A 186 -1 O THR A 185 N ALA A 175 SHEET 1 AA3 2 GLU A 218 VAL A 219 0 SHEET 2 AA3 2 ARG A 228 LEU A 229 -1 O ARG A 228 N VAL A 219 SSBOND 1 CYS A 3 CYS A 15 1555 1555 2.33 SSBOND 2 CYS A 14 CYS A 279 1555 1555 2.14 SSBOND 3 CYS A 34 CYS A 115 1555 1555 2.25 SSBOND 4 CYS A 243 CYS A 308 1555 1555 2.56 LINK OD2 ASP A 30 MG MG A 407 1555 1555 2.05 LINK OE1 GLU A 36 MN MN A 402 1555 1555 2.08 LINK OE1 GLU A 37 MG MG A 407 1555 1555 2.67 LINK OE2 GLU A 37 MG MG A 407 1555 1555 2.09 LINK O ASP A 48 CA CA A 404 1555 1555 2.49 LINK OD1 ASP A 48 CA CA A 404 1555 1555 2.32 LINK O GLY A 61 CA CA A 404 1555 1555 2.50 LINK OD1 ASP A 63 CA CA A 404 1555 1555 2.44 LINK OG SER A 65 CA CA A 404 1555 1555 2.39 LINK NE2 HIS A 170 FE HEM A 401 1555 1555 2.20 LINK O THR A 171 CA CA A 403 1555 1555 2.36 LINK OG1 THR A 171 CA CA A 403 1555 1555 2.47 LINK OD2 ASP A 176 MN MN A 402 1555 1555 2.17 LINK OD1 ASP A 188 CA CA A 403 1555 1555 2.78 LINK OD2 ASP A 188 CA CA A 403 1555 1555 2.49 LINK O THR A 190 CA CA A 403 1555 1555 2.43 LINK OG1 THR A 190 CA CA A 403 1555 1555 2.48 LINK O THR A 193 CA CA A 403 1555 1555 2.49 LINK OD1 ASP A 195 CA CA A 403 1555 1555 2.45 LINK O SER A 239 MG MG A 406 1555 1555 2.68 LINK OG SER A 331 MG MG A 407 1555 1555 1.88 LINK O1D HEM A 401 MN MN A 402 1555 1555 2.10 LINK FE HEM A 401 O HOH A 631 1555 1555 2.68 LINK MN MN A 402 O HOH A 507 1555 1555 2.29 LINK MN MN A 402 O HOH A 509 1555 1555 2.19 LINK MN MN A 402 O HOH A 547 1555 1555 2.24 LINK CA CA A 404 O HOH A 552 1555 1555 2.32 LINK CA CA A 404 O HOH A 579 1555 1555 2.48 LINK MG MG A 405 O HOH A 633 1555 1555 2.86 LINK MG MG A 406 O HOH A 639 1555 1555 2.63 CRYST1 47.790 56.640 109.510 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020925 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017655 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009132 0.00000