HEADER BIOSYNTHETIC PROTEIN 03-NOV-23 8R2B TITLE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF SNOAL2 IN COMPLEX WITH THE TITLE 2 POLYKETIDE SUBSTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SNOL; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: N-TERMINAL HIS6-TAG (SEQUENCE: MAHHHHHHRS) USED IN COMPND 6 PURIFICATION. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES NOGALATER; SOURCE 3 ORGANISM_TAXID: 38314; SOURCE 4 GENE: SNOL; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: TOP10; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PBAD KEYWDS POLYKETIDE, ANTIBIOTIC, BIOSYNTHESIS, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR R.SCHNELL,G.SCHNEIDER REVDAT 1 07-AUG-24 8R2B 0 JRNL AUTH B.N.WANDI,P.DINIS,V.SIITONEN,G.SCHNEIDER,R.SCHNELL, JRNL AUTH 2 M.METSA-KETELE JRNL TITL MECHANISM OF TWO-COMPONENT MONO-OXYGENASES INVOLVED IN JRNL TITL 2 ANTHRACYCLINE 1-HYDROXYLATION JRNL REF ACS CATALYSIS 2024 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.4C02623 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 26280 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1368 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1893 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2100 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 257 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.25000 REMARK 3 B22 (A**2) : -2.18000 REMARK 3 B33 (A**2) : -1.06000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.135 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.558 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2225 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2044 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3038 ; 1.777 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4677 ; 1.094 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 265 ; 5.175 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;34.983 ;22.743 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 352 ;14.751 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;22.431 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 327 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2515 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 545 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1057 ; 2.565 ; 2.978 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1056 ; 2.556 ; 2.973 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1323 ; 3.701 ; 4.435 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1324 ; 3.700 ; 4.440 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1168 ; 3.773 ; 3.382 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1169 ; 3.772 ; 3.381 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1716 ; 5.740 ; 4.894 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 9774 ; 8.185 ;28.966 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 9533 ; 8.095 ;28.677 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8R2B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-NOV-23. REMARK 100 THE DEPOSITION ID IS D_1292134476. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87312 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27685 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 36.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.61000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: ROD REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5, 0.2 M MGCL2, 25% REMARK 280 PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.31400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.90700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.14050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.90700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.31400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.14050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 ALA A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ARG A 0 REMARK 465 SER A 1 REMARK 465 LEU A 132 REMARK 465 GLY A 133 REMARK 465 VAL A 134 REMARK 465 VAL A 135 REMARK 465 PRO A 136 REMARK 465 ASP A 137 REMARK 465 GLY A 138 REMARK 465 LEU A 139 REMARK 465 MET B -8 REMARK 465 ALA B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 ARG B 0 REMARK 465 SER B 1 REMARK 465 GLY B 133 REMARK 465 VAL B 134 REMARK 465 VAL B 135 REMARK 465 PRO B 136 REMARK 465 ASP B 137 REMARK 465 GLY B 138 REMARK 465 LEU B 139 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 400 O HOH A 427 1.49 REMARK 500 O HOH A 347 O HOH A 401 1.72 REMARK 500 OE2 GLU A 112 O HOH A 301 1.91 REMARK 500 O HOH B 214 O HOH B 298 1.96 REMARK 500 O HOH A 364 O HOH A 379 1.99 REMARK 500 O HOH B 280 O HOH B 311 2.03 REMARK 500 O HOH B 236 O HOH B 274 2.10 REMARK 500 O HOH A 307 O HOH A 418 2.13 REMARK 500 O HOH B 219 O HOH B 282 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 414 O HOH B 275 3645 1.98 REMARK 500 O HOH A 427 O HOH B 280 3655 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 37 CB - CG - OD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP A 37 CB - CG - OD2 ANGL. DEV. = -7.5 DEGREES REMARK 500 ASP A 121 CB - CG - OD1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 75 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 40.74 -107.87 REMARK 500 PHE A 129 12.73 -145.69 REMARK 500 ASP B 32 42.24 -104.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 437 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 438 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH B 318 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH B 319 DISTANCE = 7.16 ANGSTROMS DBREF 8R2B A 2 139 UNP Q9RN64 Q9RN64_STRNO 2 139 DBREF 8R2B B 2 139 UNP Q9RN64 Q9RN64_STRNO 2 139 SEQADV 8R2B MET A -8 UNP Q9RN64 INITIATING METHIONINE SEQADV 8R2B ALA A -7 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -6 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -5 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -4 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -3 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -2 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS A -1 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B ARG A 0 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B SER A 1 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B MET B -8 UNP Q9RN64 INITIATING METHIONINE SEQADV 8R2B ALA B -7 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -6 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -5 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -4 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -3 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -2 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B HIS B -1 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B ARG B 0 UNP Q9RN64 EXPRESSION TAG SEQADV 8R2B SER B 1 UNP Q9RN64 EXPRESSION TAG SEQRES 1 A 148 MET ALA HIS HIS HIS HIS HIS HIS ARG SER SER THR THR SEQRES 2 A 148 ALA ASN LYS GLU ARG CYS LEU GLU MET VAL ALA ALA TRP SEQRES 3 A 148 ASN ARG TRP ASP VAL SER GLY VAL VAL ALA HIS TRP ALA SEQRES 4 A 148 PRO ASP VAL VAL HIS TYR ASP ASP GLU ASP LYS PRO VAL SEQRES 5 A 148 SER ALA GLU GLU VAL VAL ARG ARG MET ASN SER ALA VAL SEQRES 6 A 148 GLU ALA PHE PRO ASP LEU ARG LEU ASP VAL ARG SER ILE SEQRES 7 A 148 VAL GLY GLU GLY ASP ARG VAL MET LEU ARG ILE THR CYS SEQRES 8 A 148 SER ALA THR HIS GLN GLY VAL PHE MET GLY ILE ALA PRO SEQRES 9 A 148 THR GLY ARG LYS VAL ARG TRP THR TYR LEU GLU GLU LEU SEQRES 10 A 148 ARG PHE SER GLU ALA GLY LYS VAL VAL GLU HIS TRP ASP SEQRES 11 A 148 VAL PHE ASN PHE SER PRO LEU PHE ARG ASP LEU GLY VAL SEQRES 12 A 148 VAL PRO ASP GLY LEU SEQRES 1 B 148 MET ALA HIS HIS HIS HIS HIS HIS ARG SER SER THR THR SEQRES 2 B 148 ALA ASN LYS GLU ARG CYS LEU GLU MET VAL ALA ALA TRP SEQRES 3 B 148 ASN ARG TRP ASP VAL SER GLY VAL VAL ALA HIS TRP ALA SEQRES 4 B 148 PRO ASP VAL VAL HIS TYR ASP ASP GLU ASP LYS PRO VAL SEQRES 5 B 148 SER ALA GLU GLU VAL VAL ARG ARG MET ASN SER ALA VAL SEQRES 6 B 148 GLU ALA PHE PRO ASP LEU ARG LEU ASP VAL ARG SER ILE SEQRES 7 B 148 VAL GLY GLU GLY ASP ARG VAL MET LEU ARG ILE THR CYS SEQRES 8 B 148 SER ALA THR HIS GLN GLY VAL PHE MET GLY ILE ALA PRO SEQRES 9 B 148 THR GLY ARG LYS VAL ARG TRP THR TYR LEU GLU GLU LEU SEQRES 10 B 148 ARG PHE SER GLU ALA GLY LYS VAL VAL GLU HIS TRP ASP SEQRES 11 B 148 VAL PHE ASN PHE SER PRO LEU PHE ARG ASP LEU GLY VAL SEQRES 12 B 148 VAL PRO ASP GLY LEU HET XN0 A 201 41 HETNAM XN0 3',4'-DEMETHOXY-NOGALOSE-NOGALAMYCINONE HETSYN XN0 METHYL (1R,2S,4S)-4-[(2R,3R,4R,5S,6S)-3-METHOXY-4,6- HETSYN 2 XN0 DIMETHYL-4,5-BIS(OXIDANYL)OXAN-2-YL]OXY-2-METHYL-2,5, HETSYN 3 XN0 7-TRIS(OXIDANYL)-6,11-BIS(OXIDANYLIDENE)-3,4-DIHYDRO- HETSYN 4 XN0 1H-TETRACENE-1-CARBOXYLATE; METHYL 4-(4,5-DIHYDROXY-3- HETSYN 5 XN0 METHOXY-4,6-DIMETHYLOXAN-2-YL)OXY-2,5,7-TRIHYDROXY-2- HETSYN 6 XN0 METHYL-6,11-DIOXO-3,4-DIHYDRO-1H-TETRACENE-1- HETSYN 7 XN0 CARBOXYLATE; METHYL (1R,2S,4S)-4-[(2R,3R,4R,5S,6S)-4, HETSYN 8 XN0 5-DIHYDROXY-3-METHOXY-4,6-DIMETHYLOXAN-2-YL]OXY-2,5,7- HETSYN 9 XN0 TRIHYDROXY-2-METHYL-6,11-DIOXO-3,4-DIHYDRO-1H- HETSYN 10 XN0 TETRACENE-1-CARBOXYLATE FORMUL 3 XN0 C29 H32 O12 FORMUL 4 HOH *257(H2 O) HELIX 1 AA1 SER A 2 ARG A 19 1 18 HELIX 2 AA2 ASP A 21 ALA A 27 1 7 HELIX 3 AA3 SER A 44 PHE A 59 1 16 HELIX 4 AA4 PHE A 125 PHE A 129 5 5 HELIX 5 AA5 THR B 3 ARG B 19 1 17 HELIX 6 AA6 ASP B 21 ALA B 27 1 7 HELIX 7 AA7 SER B 44 PHE B 59 1 16 HELIX 8 AA8 PHE B 125 LEU B 132 1 8 SHEET 1 AA1 6 PRO A 42 VAL A 43 0 SHEET 2 AA1 6 TRP A 29 TYR A 36 -1 N HIS A 35 O VAL A 43 SHEET 3 AA1 6 VAL A 116 PHE A 123 1 O VAL A 116 N ALA A 30 SHEET 4 AA1 6 LYS A 99 PHE A 110 -1 N GLU A 107 O TRP A 120 SHEET 5 AA1 6 ARG A 75 THR A 85 -1 N CYS A 82 O TRP A 102 SHEET 6 AA1 6 ARG A 63 GLU A 72 -1 N VAL A 70 O MET A 77 SHEET 1 AA2 6 PRO B 42 VAL B 43 0 SHEET 2 AA2 6 TRP B 29 TYR B 36 -1 N HIS B 35 O VAL B 43 SHEET 3 AA2 6 VAL B 116 ASN B 124 1 O VAL B 116 N ALA B 30 SHEET 4 AA2 6 LYS B 99 PHE B 110 -1 N GLU B 107 O TRP B 120 SHEET 5 AA2 6 ARG B 75 THR B 85 -1 N ALA B 84 O VAL B 100 SHEET 6 AA2 6 ARG B 63 GLU B 72 -1 N ASP B 65 O THR B 81 CRYST1 52.628 62.281 89.814 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016056 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011134 0.00000