data_8R47 # _entry.id 8R47 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8R47 pdb_00008r47 10.2210/pdb8r47/pdb WWPDB D_1292134520 ? ? EMDB EMD-18881 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-06-26 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8R47 _pdbx_database_status.recvd_initial_deposition_date 2023-11-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'AL amyloid fibril from the FOR010 light chain' _pdbx_database_related.db_id EMD-18881 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email marcus.faendrich@uni-ulm.de _pdbx_contact_author.name_first Marcus _pdbx_contact_author.name_last Faendrich _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2123-6816 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pfeiffer, P.B.' 1 0009-0004-3946-3579 'Banerjee, S.' 2 0000-0003-1705-1034 'Schmidt, M.' 3 0000-0002-9442-460X 'Faendrich, M.' 4 0000-0003-2123-6816 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 5121 _citation.page_last 5121 _citation.title 'Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-024-49520-6 _citation.pdbx_database_id_PubMed 38879609 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Karimi-Farsijani, S.' 1 ? primary 'Pfeiffer, P.B.' 2 0009-0004-3946-3579 primary 'Banerjee, S.' 3 0000-0003-1705-1034 primary 'Baur, J.' 4 ? primary 'Kuhn, L.' 5 ? primary 'Kupfer, N.' 6 ? primary 'Hegenbart, U.' 7 0000-0003-1917-6746 primary 'Schonland, S.O.' 8 0000-0002-4853-5579 primary 'Wiese, S.' 9 0000-0001-5697-2608 primary 'Haupt, C.' 10 ? primary 'Schmidt, M.' 11 0000-0002-9442-460X primary 'Fandrich, M.' 12 0000-0003-2123-6816 # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'lambda 3 immunoglobulin light chain fragment, residues 4-116' _entity.formula_weight 12063.337 _entity.pdbx_number_of_molecules 6 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LTQDPAVSVPLGQTVRITCQGDSLRTYYGNWYQQKPGQAPLLVIYAENKRPSGIPDRFSGSISGNTASLTITGAQAEDEA DYFCNSRDTTGNLWVFGGGTKLTVLGQPKAAPS ; _entity_poly.pdbx_seq_one_letter_code_can ;LTQDPAVSVPLGQTVRITCQGDSLRTYYGNWYQQKPGQAPLLVIYAENKRPSGIPDRFSGSISGNTASLTITGAQAEDEA DYFCNSRDTTGNLWVFGGGTKLTVLGQPKAAPS ; _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 THR n 1 3 GLN n 1 4 ASP n 1 5 PRO n 1 6 ALA n 1 7 VAL n 1 8 SER n 1 9 VAL n 1 10 PRO n 1 11 LEU n 1 12 GLY n 1 13 GLN n 1 14 THR n 1 15 VAL n 1 16 ARG n 1 17 ILE n 1 18 THR n 1 19 CYS n 1 20 GLN n 1 21 GLY n 1 22 ASP n 1 23 SER n 1 24 LEU n 1 25 ARG n 1 26 THR n 1 27 TYR n 1 28 TYR n 1 29 GLY n 1 30 ASN n 1 31 TRP n 1 32 TYR n 1 33 GLN n 1 34 GLN n 1 35 LYS n 1 36 PRO n 1 37 GLY n 1 38 GLN n 1 39 ALA n 1 40 PRO n 1 41 LEU n 1 42 LEU n 1 43 VAL n 1 44 ILE n 1 45 TYR n 1 46 ALA n 1 47 GLU n 1 48 ASN n 1 49 LYS n 1 50 ARG n 1 51 PRO n 1 52 SER n 1 53 GLY n 1 54 ILE n 1 55 PRO n 1 56 ASP n 1 57 ARG n 1 58 PHE n 1 59 SER n 1 60 GLY n 1 61 SER n 1 62 ILE n 1 63 SER n 1 64 GLY n 1 65 ASN n 1 66 THR n 1 67 ALA n 1 68 SER n 1 69 LEU n 1 70 THR n 1 71 ILE n 1 72 THR n 1 73 GLY n 1 74 ALA n 1 75 GLN n 1 76 ALA n 1 77 GLU n 1 78 ASP n 1 79 GLU n 1 80 ALA n 1 81 ASP n 1 82 TYR n 1 83 PHE n 1 84 CYS n 1 85 ASN n 1 86 SER n 1 87 ARG n 1 88 ASP n 1 89 THR n 1 90 THR n 1 91 GLY n 1 92 ASN n 1 93 LEU n 1 94 TRP n 1 95 VAL n 1 96 PHE n 1 97 GLY n 1 98 GLY n 1 99 GLY n 1 100 THR n 1 101 LYS n 1 102 LEU n 1 103 THR n 1 104 VAL n 1 105 LEU n 1 106 GLY n 1 107 GLN n 1 108 PRO n 1 109 LYS n 1 110 ALA n 1 111 ALA n 1 112 PRO n 1 113 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 113 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 4 ? ? ? A . n A 1 2 THR 2 5 ? ? ? A . n A 1 3 GLN 3 6 ? ? ? A . n A 1 4 ASP 4 7 ? ? ? A . n A 1 5 PRO 5 8 ? ? ? A . n A 1 6 ALA 6 9 ? ? ? A . n A 1 7 VAL 7 10 ? ? ? A . n A 1 8 SER 8 11 ? ? ? A . n A 1 9 VAL 9 12 ? ? ? A . n A 1 10 PRO 10 13 13 PRO PRO A . n A 1 11 LEU 11 14 14 LEU LEU A . n A 1 12 GLY 12 15 15 GLY GLY A . n A 1 13 GLN 13 16 16 GLN GLN A . n A 1 14 THR 14 17 17 THR THR A . n A 1 15 VAL 15 18 18 VAL VAL A . n A 1 16 ARG 16 19 19 ARG ARG A . n A 1 17 ILE 17 20 20 ILE ILE A . n A 1 18 THR 18 21 21 THR THR A . n A 1 19 CYS 19 22 22 CYS CYS A . n A 1 20 GLN 20 23 23 GLN GLN A . n A 1 21 GLY 21 24 24 GLY GLY A . n A 1 22 ASP 22 25 25 ASP ASP A . n A 1 23 SER 23 26 26 SER SER A . n A 1 24 LEU 24 27 27 LEU LEU A . n A 1 25 ARG 25 28 28 ARG ARG A . n A 1 26 THR 26 29 29 THR THR A . n A 1 27 TYR 27 30 30 TYR TYR A . n A 1 28 TYR 28 31 31 TYR TYR A . n A 1 29 GLY 29 32 32 GLY GLY A . n A 1 30 ASN 30 33 33 ASN ASN A . n A 1 31 TRP 31 34 34 TRP TRP A . n A 1 32 TYR 32 35 35 TYR TYR A . n A 1 33 GLN 33 36 36 GLN GLN A . n A 1 34 GLN 34 37 37 GLN GLN A . n A 1 35 LYS 35 38 38 LYS LYS A . n A 1 36 PRO 36 39 39 PRO PRO A . n A 1 37 GLY 37 40 40 GLY GLY A . n A 1 38 GLN 38 41 41 GLN GLN A . n A 1 39 ALA 39 42 42 ALA ALA A . n A 1 40 PRO 40 43 43 PRO PRO A . n A 1 41 LEU 41 44 44 LEU LEU A . n A 1 42 LEU 42 45 45 LEU LEU A . n A 1 43 VAL 43 46 46 VAL VAL A . n A 1 44 ILE 44 47 47 ILE ILE A . n A 1 45 TYR 45 48 48 TYR TYR A . n A 1 46 ALA 46 49 49 ALA ALA A . n A 1 47 GLU 47 50 ? ? ? A . n A 1 48 ASN 48 51 ? ? ? A . n A 1 49 LYS 49 52 ? ? ? A . n A 1 50 ARG 50 53 ? ? ? A . n A 1 51 PRO 51 54 ? ? ? A . n A 1 52 SER 52 55 ? ? ? A . n A 1 53 GLY 53 56 ? ? ? A . n A 1 54 ILE 54 57 ? ? ? A . n A 1 55 PRO 55 58 ? ? ? A . n A 1 56 ASP 56 59 ? ? ? A . n A 1 57 ARG 57 60 ? ? ? A . n A 1 58 PHE 58 61 61 PHE PHE A . n A 1 59 SER 59 62 62 SER SER A . n A 1 60 GLY 60 63 63 GLY GLY A . n A 1 61 SER 61 64 64 SER SER A . n A 1 62 ILE 62 65 65 ILE ILE A . n A 1 63 SER 63 66 66 SER SER A . n A 1 64 GLY 64 67 67 GLY GLY A . n A 1 65 ASN 65 68 68 ASN ASN A . n A 1 66 THR 66 69 69 THR THR A . n A 1 67 ALA 67 70 70 ALA ALA A . n A 1 68 SER 68 71 71 SER SER A . n A 1 69 LEU 69 72 72 LEU LEU A . n A 1 70 THR 70 73 73 THR THR A . n A 1 71 ILE 71 74 74 ILE ILE A . n A 1 72 THR 72 75 75 THR THR A . n A 1 73 GLY 73 76 76 GLY GLY A . n A 1 74 ALA 74 77 77 ALA ALA A . n A 1 75 GLN 75 78 78 GLN GLN A . n A 1 76 ALA 76 79 79 ALA ALA A . n A 1 77 GLU 77 80 80 GLU GLU A . n A 1 78 ASP 78 81 81 ASP ASP A . n A 1 79 GLU 79 82 82 GLU GLU A . n A 1 80 ALA 80 83 83 ALA ALA A . n A 1 81 ASP 81 84 84 ASP ASP A . n A 1 82 TYR 82 85 85 TYR TYR A . n A 1 83 PHE 83 86 86 PHE PHE A . n A 1 84 CYS 84 87 87 CYS CYS A . n A 1 85 ASN 85 88 88 ASN ASN A . n A 1 86 SER 86 89 89 SER SER A . n A 1 87 ARG 87 90 90 ARG ARG A . n A 1 88 ASP 88 91 91 ASP ASP A . n A 1 89 THR 89 92 92 THR THR A . n A 1 90 THR 90 93 93 THR THR A . n A 1 91 GLY 91 94 94 GLY GLY A . n A 1 92 ASN 92 95 95 ASN ASN A . n A 1 93 LEU 93 96 96 LEU LEU A . n A 1 94 TRP 94 97 97 TRP TRP A . n A 1 95 VAL 95 98 98 VAL VAL A . n A 1 96 PHE 96 99 99 PHE PHE A . n A 1 97 GLY 97 100 100 GLY GLY A . n A 1 98 GLY 98 101 101 GLY GLY A . n A 1 99 GLY 99 102 102 GLY GLY A . n A 1 100 THR 100 103 103 THR THR A . n A 1 101 LYS 101 104 104 LYS LYS A . n A 1 102 LEU 102 105 105 LEU LEU A . n A 1 103 THR 103 106 106 THR THR A . n A 1 104 VAL 104 107 ? ? ? A . n A 1 105 LEU 105 108 ? ? ? A . n A 1 106 GLY 106 109 ? ? ? A . n A 1 107 GLN 107 110 ? ? ? A . n A 1 108 PRO 108 111 ? ? ? A . n A 1 109 LYS 109 112 ? ? ? A . n A 1 110 ALA 110 113 ? ? ? A . n A 1 111 ALA 111 114 ? ? ? A . n A 1 112 PRO 112 115 ? ? ? A . n A 1 113 SER 113 116 ? ? ? A . n B 1 1 LEU 1 4 ? ? ? B . n B 1 2 THR 2 5 ? ? ? B . n B 1 3 GLN 3 6 ? ? ? B . n B 1 4 ASP 4 7 ? ? ? B . n B 1 5 PRO 5 8 ? ? ? B . n B 1 6 ALA 6 9 ? ? ? B . n B 1 7 VAL 7 10 ? ? ? B . n B 1 8 SER 8 11 ? ? ? B . n B 1 9 VAL 9 12 ? ? ? B . n B 1 10 PRO 10 13 13 PRO PRO B . n B 1 11 LEU 11 14 14 LEU LEU B . n B 1 12 GLY 12 15 15 GLY GLY B . n B 1 13 GLN 13 16 16 GLN GLN B . n B 1 14 THR 14 17 17 THR THR B . n B 1 15 VAL 15 18 18 VAL VAL B . n B 1 16 ARG 16 19 19 ARG ARG B . n B 1 17 ILE 17 20 20 ILE ILE B . n B 1 18 THR 18 21 21 THR THR B . n B 1 19 CYS 19 22 22 CYS CYS B . n B 1 20 GLN 20 23 23 GLN GLN B . n B 1 21 GLY 21 24 24 GLY GLY B . n B 1 22 ASP 22 25 25 ASP ASP B . n B 1 23 SER 23 26 26 SER SER B . n B 1 24 LEU 24 27 27 LEU LEU B . n B 1 25 ARG 25 28 28 ARG ARG B . n B 1 26 THR 26 29 29 THR THR B . n B 1 27 TYR 27 30 30 TYR TYR B . n B 1 28 TYR 28 31 31 TYR TYR B . n B 1 29 GLY 29 32 32 GLY GLY B . n B 1 30 ASN 30 33 33 ASN ASN B . n B 1 31 TRP 31 34 34 TRP TRP B . n B 1 32 TYR 32 35 35 TYR TYR B . n B 1 33 GLN 33 36 36 GLN GLN B . n B 1 34 GLN 34 37 37 GLN GLN B . n B 1 35 LYS 35 38 38 LYS LYS B . n B 1 36 PRO 36 39 39 PRO PRO B . n B 1 37 GLY 37 40 40 GLY GLY B . n B 1 38 GLN 38 41 41 GLN GLN B . n B 1 39 ALA 39 42 42 ALA ALA B . n B 1 40 PRO 40 43 43 PRO PRO B . n B 1 41 LEU 41 44 44 LEU LEU B . n B 1 42 LEU 42 45 45 LEU LEU B . n B 1 43 VAL 43 46 46 VAL VAL B . n B 1 44 ILE 44 47 47 ILE ILE B . n B 1 45 TYR 45 48 48 TYR TYR B . n B 1 46 ALA 46 49 49 ALA ALA B . n B 1 47 GLU 47 50 ? ? ? B . n B 1 48 ASN 48 51 ? ? ? B . n B 1 49 LYS 49 52 ? ? ? B . n B 1 50 ARG 50 53 ? ? ? B . n B 1 51 PRO 51 54 ? ? ? B . n B 1 52 SER 52 55 ? ? ? B . n B 1 53 GLY 53 56 ? ? ? B . n B 1 54 ILE 54 57 ? ? ? B . n B 1 55 PRO 55 58 ? ? ? B . n B 1 56 ASP 56 59 ? ? ? B . n B 1 57 ARG 57 60 ? ? ? B . n B 1 58 PHE 58 61 61 PHE PHE B . n B 1 59 SER 59 62 62 SER SER B . n B 1 60 GLY 60 63 63 GLY GLY B . n B 1 61 SER 61 64 64 SER SER B . n B 1 62 ILE 62 65 65 ILE ILE B . n B 1 63 SER 63 66 66 SER SER B . n B 1 64 GLY 64 67 67 GLY GLY B . n B 1 65 ASN 65 68 68 ASN ASN B . n B 1 66 THR 66 69 69 THR THR B . n B 1 67 ALA 67 70 70 ALA ALA B . n B 1 68 SER 68 71 71 SER SER B . n B 1 69 LEU 69 72 72 LEU LEU B . n B 1 70 THR 70 73 73 THR THR B . n B 1 71 ILE 71 74 74 ILE ILE B . n B 1 72 THR 72 75 75 THR THR B . n B 1 73 GLY 73 76 76 GLY GLY B . n B 1 74 ALA 74 77 77 ALA ALA B . n B 1 75 GLN 75 78 78 GLN GLN B . n B 1 76 ALA 76 79 79 ALA ALA B . n B 1 77 GLU 77 80 80 GLU GLU B . n B 1 78 ASP 78 81 81 ASP ASP B . n B 1 79 GLU 79 82 82 GLU GLU B . n B 1 80 ALA 80 83 83 ALA ALA B . n B 1 81 ASP 81 84 84 ASP ASP B . n B 1 82 TYR 82 85 85 TYR TYR B . n B 1 83 PHE 83 86 86 PHE PHE B . n B 1 84 CYS 84 87 87 CYS CYS B . n B 1 85 ASN 85 88 88 ASN ASN B . n B 1 86 SER 86 89 89 SER SER B . n B 1 87 ARG 87 90 90 ARG ARG B . n B 1 88 ASP 88 91 91 ASP ASP B . n B 1 89 THR 89 92 92 THR THR B . n B 1 90 THR 90 93 93 THR THR B . n B 1 91 GLY 91 94 94 GLY GLY B . n B 1 92 ASN 92 95 95 ASN ASN B . n B 1 93 LEU 93 96 96 LEU LEU B . n B 1 94 TRP 94 97 97 TRP TRP B . n B 1 95 VAL 95 98 98 VAL VAL B . n B 1 96 PHE 96 99 99 PHE PHE B . n B 1 97 GLY 97 100 100 GLY GLY B . n B 1 98 GLY 98 101 101 GLY GLY B . n B 1 99 GLY 99 102 102 GLY GLY B . n B 1 100 THR 100 103 103 THR THR B . n B 1 101 LYS 101 104 104 LYS LYS B . n B 1 102 LEU 102 105 105 LEU LEU B . n B 1 103 THR 103 106 106 THR THR B . n B 1 104 VAL 104 107 ? ? ? B . n B 1 105 LEU 105 108 ? ? ? B . n B 1 106 GLY 106 109 ? ? ? B . n B 1 107 GLN 107 110 ? ? ? B . n B 1 108 PRO 108 111 ? ? ? B . n B 1 109 LYS 109 112 ? ? ? B . n B 1 110 ALA 110 113 ? ? ? B . n B 1 111 ALA 111 114 ? ? ? B . n B 1 112 PRO 112 115 ? ? ? B . n B 1 113 SER 113 116 ? ? ? B . n C 1 1 LEU 1 4 ? ? ? C . n C 1 2 THR 2 5 ? ? ? C . n C 1 3 GLN 3 6 ? ? ? C . n C 1 4 ASP 4 7 ? ? ? C . n C 1 5 PRO 5 8 ? ? ? C . n C 1 6 ALA 6 9 ? ? ? C . n C 1 7 VAL 7 10 ? ? ? C . n C 1 8 SER 8 11 ? ? ? C . n C 1 9 VAL 9 12 ? ? ? C . n C 1 10 PRO 10 13 13 PRO PRO C . n C 1 11 LEU 11 14 14 LEU LEU C . n C 1 12 GLY 12 15 15 GLY GLY C . n C 1 13 GLN 13 16 16 GLN GLN C . n C 1 14 THR 14 17 17 THR THR C . n C 1 15 VAL 15 18 18 VAL VAL C . n C 1 16 ARG 16 19 19 ARG ARG C . n C 1 17 ILE 17 20 20 ILE ILE C . n C 1 18 THR 18 21 21 THR THR C . n C 1 19 CYS 19 22 22 CYS CYS C . n C 1 20 GLN 20 23 23 GLN GLN C . n C 1 21 GLY 21 24 24 GLY GLY C . n C 1 22 ASP 22 25 25 ASP ASP C . n C 1 23 SER 23 26 26 SER SER C . n C 1 24 LEU 24 27 27 LEU LEU C . n C 1 25 ARG 25 28 28 ARG ARG C . n C 1 26 THR 26 29 29 THR THR C . n C 1 27 TYR 27 30 30 TYR TYR C . n C 1 28 TYR 28 31 31 TYR TYR C . n C 1 29 GLY 29 32 32 GLY GLY C . n C 1 30 ASN 30 33 33 ASN ASN C . n C 1 31 TRP 31 34 34 TRP TRP C . n C 1 32 TYR 32 35 35 TYR TYR C . n C 1 33 GLN 33 36 36 GLN GLN C . n C 1 34 GLN 34 37 37 GLN GLN C . n C 1 35 LYS 35 38 38 LYS LYS C . n C 1 36 PRO 36 39 39 PRO PRO C . n C 1 37 GLY 37 40 40 GLY GLY C . n C 1 38 GLN 38 41 41 GLN GLN C . n C 1 39 ALA 39 42 42 ALA ALA C . n C 1 40 PRO 40 43 43 PRO PRO C . n C 1 41 LEU 41 44 44 LEU LEU C . n C 1 42 LEU 42 45 45 LEU LEU C . n C 1 43 VAL 43 46 46 VAL VAL C . n C 1 44 ILE 44 47 47 ILE ILE C . n C 1 45 TYR 45 48 48 TYR TYR C . n C 1 46 ALA 46 49 49 ALA ALA C . n C 1 47 GLU 47 50 ? ? ? C . n C 1 48 ASN 48 51 ? ? ? C . n C 1 49 LYS 49 52 ? ? ? C . n C 1 50 ARG 50 53 ? ? ? C . n C 1 51 PRO 51 54 ? ? ? C . n C 1 52 SER 52 55 ? ? ? C . n C 1 53 GLY 53 56 ? ? ? C . n C 1 54 ILE 54 57 ? ? ? C . n C 1 55 PRO 55 58 ? ? ? C . n C 1 56 ASP 56 59 ? ? ? C . n C 1 57 ARG 57 60 ? ? ? C . n C 1 58 PHE 58 61 61 PHE PHE C . n C 1 59 SER 59 62 62 SER SER C . n C 1 60 GLY 60 63 63 GLY GLY C . n C 1 61 SER 61 64 64 SER SER C . n C 1 62 ILE 62 65 65 ILE ILE C . n C 1 63 SER 63 66 66 SER SER C . n C 1 64 GLY 64 67 67 GLY GLY C . n C 1 65 ASN 65 68 68 ASN ASN C . n C 1 66 THR 66 69 69 THR THR C . n C 1 67 ALA 67 70 70 ALA ALA C . n C 1 68 SER 68 71 71 SER SER C . n C 1 69 LEU 69 72 72 LEU LEU C . n C 1 70 THR 70 73 73 THR THR C . n C 1 71 ILE 71 74 74 ILE ILE C . n C 1 72 THR 72 75 75 THR THR C . n C 1 73 GLY 73 76 76 GLY GLY C . n C 1 74 ALA 74 77 77 ALA ALA C . n C 1 75 GLN 75 78 78 GLN GLN C . n C 1 76 ALA 76 79 79 ALA ALA C . n C 1 77 GLU 77 80 80 GLU GLU C . n C 1 78 ASP 78 81 81 ASP ASP C . n C 1 79 GLU 79 82 82 GLU GLU C . n C 1 80 ALA 80 83 83 ALA ALA C . n C 1 81 ASP 81 84 84 ASP ASP C . n C 1 82 TYR 82 85 85 TYR TYR C . n C 1 83 PHE 83 86 86 PHE PHE C . n C 1 84 CYS 84 87 87 CYS CYS C . n C 1 85 ASN 85 88 88 ASN ASN C . n C 1 86 SER 86 89 89 SER SER C . n C 1 87 ARG 87 90 90 ARG ARG C . n C 1 88 ASP 88 91 91 ASP ASP C . n C 1 89 THR 89 92 92 THR THR C . n C 1 90 THR 90 93 93 THR THR C . n C 1 91 GLY 91 94 94 GLY GLY C . n C 1 92 ASN 92 95 95 ASN ASN C . n C 1 93 LEU 93 96 96 LEU LEU C . n C 1 94 TRP 94 97 97 TRP TRP C . n C 1 95 VAL 95 98 98 VAL VAL C . n C 1 96 PHE 96 99 99 PHE PHE C . n C 1 97 GLY 97 100 100 GLY GLY C . n C 1 98 GLY 98 101 101 GLY GLY C . n C 1 99 GLY 99 102 102 GLY GLY C . n C 1 100 THR 100 103 103 THR THR C . n C 1 101 LYS 101 104 104 LYS LYS C . n C 1 102 LEU 102 105 105 LEU LEU C . n C 1 103 THR 103 106 106 THR THR C . n C 1 104 VAL 104 107 ? ? ? C . n C 1 105 LEU 105 108 ? ? ? C . n C 1 106 GLY 106 109 ? ? ? C . n C 1 107 GLN 107 110 ? ? ? C . n C 1 108 PRO 108 111 ? ? ? C . n C 1 109 LYS 109 112 ? ? ? C . n C 1 110 ALA 110 113 ? ? ? C . n C 1 111 ALA 111 114 ? ? ? C . n C 1 112 PRO 112 115 ? ? ? C . n C 1 113 SER 113 116 ? ? ? C . n D 1 1 LEU 1 4 ? ? ? D . n D 1 2 THR 2 5 ? ? ? D . n D 1 3 GLN 3 6 ? ? ? D . n D 1 4 ASP 4 7 ? ? ? D . n D 1 5 PRO 5 8 ? ? ? D . n D 1 6 ALA 6 9 ? ? ? D . n D 1 7 VAL 7 10 ? ? ? D . n D 1 8 SER 8 11 ? ? ? D . n D 1 9 VAL 9 12 ? ? ? D . n D 1 10 PRO 10 13 13 PRO PRO D . n D 1 11 LEU 11 14 14 LEU LEU D . n D 1 12 GLY 12 15 15 GLY GLY D . n D 1 13 GLN 13 16 16 GLN GLN D . n D 1 14 THR 14 17 17 THR THR D . n D 1 15 VAL 15 18 18 VAL VAL D . n D 1 16 ARG 16 19 19 ARG ARG D . n D 1 17 ILE 17 20 20 ILE ILE D . n D 1 18 THR 18 21 21 THR THR D . n D 1 19 CYS 19 22 22 CYS CYS D . n D 1 20 GLN 20 23 23 GLN GLN D . n D 1 21 GLY 21 24 24 GLY GLY D . n D 1 22 ASP 22 25 25 ASP ASP D . n D 1 23 SER 23 26 26 SER SER D . n D 1 24 LEU 24 27 27 LEU LEU D . n D 1 25 ARG 25 28 28 ARG ARG D . n D 1 26 THR 26 29 29 THR THR D . n D 1 27 TYR 27 30 30 TYR TYR D . n D 1 28 TYR 28 31 31 TYR TYR D . n D 1 29 GLY 29 32 32 GLY GLY D . n D 1 30 ASN 30 33 33 ASN ASN D . n D 1 31 TRP 31 34 34 TRP TRP D . n D 1 32 TYR 32 35 35 TYR TYR D . n D 1 33 GLN 33 36 36 GLN GLN D . n D 1 34 GLN 34 37 37 GLN GLN D . n D 1 35 LYS 35 38 38 LYS LYS D . n D 1 36 PRO 36 39 39 PRO PRO D . n D 1 37 GLY 37 40 40 GLY GLY D . n D 1 38 GLN 38 41 41 GLN GLN D . n D 1 39 ALA 39 42 42 ALA ALA D . n D 1 40 PRO 40 43 43 PRO PRO D . n D 1 41 LEU 41 44 44 LEU LEU D . n D 1 42 LEU 42 45 45 LEU LEU D . n D 1 43 VAL 43 46 46 VAL VAL D . n D 1 44 ILE 44 47 47 ILE ILE D . n D 1 45 TYR 45 48 48 TYR TYR D . n D 1 46 ALA 46 49 49 ALA ALA D . n D 1 47 GLU 47 50 ? ? ? D . n D 1 48 ASN 48 51 ? ? ? D . n D 1 49 LYS 49 52 ? ? ? D . n D 1 50 ARG 50 53 ? ? ? D . n D 1 51 PRO 51 54 ? ? ? D . n D 1 52 SER 52 55 ? ? ? D . n D 1 53 GLY 53 56 ? ? ? D . n D 1 54 ILE 54 57 ? ? ? D . n D 1 55 PRO 55 58 ? ? ? D . n D 1 56 ASP 56 59 ? ? ? D . n D 1 57 ARG 57 60 ? ? ? D . n D 1 58 PHE 58 61 61 PHE PHE D . n D 1 59 SER 59 62 62 SER SER D . n D 1 60 GLY 60 63 63 GLY GLY D . n D 1 61 SER 61 64 64 SER SER D . n D 1 62 ILE 62 65 65 ILE ILE D . n D 1 63 SER 63 66 66 SER SER D . n D 1 64 GLY 64 67 67 GLY GLY D . n D 1 65 ASN 65 68 68 ASN ASN D . n D 1 66 THR 66 69 69 THR THR D . n D 1 67 ALA 67 70 70 ALA ALA D . n D 1 68 SER 68 71 71 SER SER D . n D 1 69 LEU 69 72 72 LEU LEU D . n D 1 70 THR 70 73 73 THR THR D . n D 1 71 ILE 71 74 74 ILE ILE D . n D 1 72 THR 72 75 75 THR THR D . n D 1 73 GLY 73 76 76 GLY GLY D . n D 1 74 ALA 74 77 77 ALA ALA D . n D 1 75 GLN 75 78 78 GLN GLN D . n D 1 76 ALA 76 79 79 ALA ALA D . n D 1 77 GLU 77 80 80 GLU GLU D . n D 1 78 ASP 78 81 81 ASP ASP D . n D 1 79 GLU 79 82 82 GLU GLU D . n D 1 80 ALA 80 83 83 ALA ALA D . n D 1 81 ASP 81 84 84 ASP ASP D . n D 1 82 TYR 82 85 85 TYR TYR D . n D 1 83 PHE 83 86 86 PHE PHE D . n D 1 84 CYS 84 87 87 CYS CYS D . n D 1 85 ASN 85 88 88 ASN ASN D . n D 1 86 SER 86 89 89 SER SER D . n D 1 87 ARG 87 90 90 ARG ARG D . n D 1 88 ASP 88 91 91 ASP ASP D . n D 1 89 THR 89 92 92 THR THR D . n D 1 90 THR 90 93 93 THR THR D . n D 1 91 GLY 91 94 94 GLY GLY D . n D 1 92 ASN 92 95 95 ASN ASN D . n D 1 93 LEU 93 96 96 LEU LEU D . n D 1 94 TRP 94 97 97 TRP TRP D . n D 1 95 VAL 95 98 98 VAL VAL D . n D 1 96 PHE 96 99 99 PHE PHE D . n D 1 97 GLY 97 100 100 GLY GLY D . n D 1 98 GLY 98 101 101 GLY GLY D . n D 1 99 GLY 99 102 102 GLY GLY D . n D 1 100 THR 100 103 103 THR THR D . n D 1 101 LYS 101 104 104 LYS LYS D . n D 1 102 LEU 102 105 105 LEU LEU D . n D 1 103 THR 103 106 106 THR THR D . n D 1 104 VAL 104 107 ? ? ? D . n D 1 105 LEU 105 108 ? ? ? D . n D 1 106 GLY 106 109 ? ? ? D . n D 1 107 GLN 107 110 ? ? ? D . n D 1 108 PRO 108 111 ? ? ? D . n D 1 109 LYS 109 112 ? ? ? D . n D 1 110 ALA 110 113 ? ? ? D . n D 1 111 ALA 111 114 ? ? ? D . n D 1 112 PRO 112 115 ? ? ? D . n D 1 113 SER 113 116 ? ? ? D . n E 1 1 LEU 1 4 ? ? ? E . n E 1 2 THR 2 5 ? ? ? E . n E 1 3 GLN 3 6 ? ? ? E . n E 1 4 ASP 4 7 ? ? ? E . n E 1 5 PRO 5 8 ? ? ? E . n E 1 6 ALA 6 9 ? ? ? E . n E 1 7 VAL 7 10 ? ? ? E . n E 1 8 SER 8 11 ? ? ? E . n E 1 9 VAL 9 12 ? ? ? E . n E 1 10 PRO 10 13 13 PRO PRO E . n E 1 11 LEU 11 14 14 LEU LEU E . n E 1 12 GLY 12 15 15 GLY GLY E . n E 1 13 GLN 13 16 16 GLN GLN E . n E 1 14 THR 14 17 17 THR THR E . n E 1 15 VAL 15 18 18 VAL VAL E . n E 1 16 ARG 16 19 19 ARG ARG E . n E 1 17 ILE 17 20 20 ILE ILE E . n E 1 18 THR 18 21 21 THR THR E . n E 1 19 CYS 19 22 22 CYS CYS E . n E 1 20 GLN 20 23 23 GLN GLN E . n E 1 21 GLY 21 24 24 GLY GLY E . n E 1 22 ASP 22 25 25 ASP ASP E . n E 1 23 SER 23 26 26 SER SER E . n E 1 24 LEU 24 27 27 LEU LEU E . n E 1 25 ARG 25 28 28 ARG ARG E . n E 1 26 THR 26 29 29 THR THR E . n E 1 27 TYR 27 30 30 TYR TYR E . n E 1 28 TYR 28 31 31 TYR TYR E . n E 1 29 GLY 29 32 32 GLY GLY E . n E 1 30 ASN 30 33 33 ASN ASN E . n E 1 31 TRP 31 34 34 TRP TRP E . n E 1 32 TYR 32 35 35 TYR TYR E . n E 1 33 GLN 33 36 36 GLN GLN E . n E 1 34 GLN 34 37 37 GLN GLN E . n E 1 35 LYS 35 38 38 LYS LYS E . n E 1 36 PRO 36 39 39 PRO PRO E . n E 1 37 GLY 37 40 40 GLY GLY E . n E 1 38 GLN 38 41 41 GLN GLN E . n E 1 39 ALA 39 42 42 ALA ALA E . n E 1 40 PRO 40 43 43 PRO PRO E . n E 1 41 LEU 41 44 44 LEU LEU E . n E 1 42 LEU 42 45 45 LEU LEU E . n E 1 43 VAL 43 46 46 VAL VAL E . n E 1 44 ILE 44 47 47 ILE ILE E . n E 1 45 TYR 45 48 48 TYR TYR E . n E 1 46 ALA 46 49 49 ALA ALA E . n E 1 47 GLU 47 50 ? ? ? E . n E 1 48 ASN 48 51 ? ? ? E . n E 1 49 LYS 49 52 ? ? ? E . n E 1 50 ARG 50 53 ? ? ? E . n E 1 51 PRO 51 54 ? ? ? E . n E 1 52 SER 52 55 ? ? ? E . n E 1 53 GLY 53 56 ? ? ? E . n E 1 54 ILE 54 57 ? ? ? E . n E 1 55 PRO 55 58 ? ? ? E . n E 1 56 ASP 56 59 ? ? ? E . n E 1 57 ARG 57 60 ? ? ? E . n E 1 58 PHE 58 61 61 PHE PHE E . n E 1 59 SER 59 62 62 SER SER E . n E 1 60 GLY 60 63 63 GLY GLY E . n E 1 61 SER 61 64 64 SER SER E . n E 1 62 ILE 62 65 65 ILE ILE E . n E 1 63 SER 63 66 66 SER SER E . n E 1 64 GLY 64 67 67 GLY GLY E . n E 1 65 ASN 65 68 68 ASN ASN E . n E 1 66 THR 66 69 69 THR THR E . n E 1 67 ALA 67 70 70 ALA ALA E . n E 1 68 SER 68 71 71 SER SER E . n E 1 69 LEU 69 72 72 LEU LEU E . n E 1 70 THR 70 73 73 THR THR E . n E 1 71 ILE 71 74 74 ILE ILE E . n E 1 72 THR 72 75 75 THR THR E . n E 1 73 GLY 73 76 76 GLY GLY E . n E 1 74 ALA 74 77 77 ALA ALA E . n E 1 75 GLN 75 78 78 GLN GLN E . n E 1 76 ALA 76 79 79 ALA ALA E . n E 1 77 GLU 77 80 80 GLU GLU E . n E 1 78 ASP 78 81 81 ASP ASP E . n E 1 79 GLU 79 82 82 GLU GLU E . n E 1 80 ALA 80 83 83 ALA ALA E . n E 1 81 ASP 81 84 84 ASP ASP E . n E 1 82 TYR 82 85 85 TYR TYR E . n E 1 83 PHE 83 86 86 PHE PHE E . n E 1 84 CYS 84 87 87 CYS CYS E . n E 1 85 ASN 85 88 88 ASN ASN E . n E 1 86 SER 86 89 89 SER SER E . n E 1 87 ARG 87 90 90 ARG ARG E . n E 1 88 ASP 88 91 91 ASP ASP E . n E 1 89 THR 89 92 92 THR THR E . n E 1 90 THR 90 93 93 THR THR E . n E 1 91 GLY 91 94 94 GLY GLY E . n E 1 92 ASN 92 95 95 ASN ASN E . n E 1 93 LEU 93 96 96 LEU LEU E . n E 1 94 TRP 94 97 97 TRP TRP E . n E 1 95 VAL 95 98 98 VAL VAL E . n E 1 96 PHE 96 99 99 PHE PHE E . n E 1 97 GLY 97 100 100 GLY GLY E . n E 1 98 GLY 98 101 101 GLY GLY E . n E 1 99 GLY 99 102 102 GLY GLY E . n E 1 100 THR 100 103 103 THR THR E . n E 1 101 LYS 101 104 104 LYS LYS E . n E 1 102 LEU 102 105 105 LEU LEU E . n E 1 103 THR 103 106 106 THR THR E . n E 1 104 VAL 104 107 ? ? ? E . n E 1 105 LEU 105 108 ? ? ? E . n E 1 106 GLY 106 109 ? ? ? E . n E 1 107 GLN 107 110 ? ? ? E . n E 1 108 PRO 108 111 ? ? ? E . n E 1 109 LYS 109 112 ? ? ? E . n E 1 110 ALA 110 113 ? ? ? E . n E 1 111 ALA 111 114 ? ? ? E . n E 1 112 PRO 112 115 ? ? ? E . n E 1 113 SER 113 116 ? ? ? E . n F 1 1 LEU 1 4 ? ? ? F . n F 1 2 THR 2 5 ? ? ? F . n F 1 3 GLN 3 6 ? ? ? F . n F 1 4 ASP 4 7 ? ? ? F . n F 1 5 PRO 5 8 ? ? ? F . n F 1 6 ALA 6 9 ? ? ? F . n F 1 7 VAL 7 10 ? ? ? F . n F 1 8 SER 8 11 ? ? ? F . n F 1 9 VAL 9 12 ? ? ? F . n F 1 10 PRO 10 13 13 PRO PRO F . n F 1 11 LEU 11 14 14 LEU LEU F . n F 1 12 GLY 12 15 15 GLY GLY F . n F 1 13 GLN 13 16 16 GLN GLN F . n F 1 14 THR 14 17 17 THR THR F . n F 1 15 VAL 15 18 18 VAL VAL F . n F 1 16 ARG 16 19 19 ARG ARG F . n F 1 17 ILE 17 20 20 ILE ILE F . n F 1 18 THR 18 21 21 THR THR F . n F 1 19 CYS 19 22 22 CYS CYS F . n F 1 20 GLN 20 23 23 GLN GLN F . n F 1 21 GLY 21 24 24 GLY GLY F . n F 1 22 ASP 22 25 25 ASP ASP F . n F 1 23 SER 23 26 26 SER SER F . n F 1 24 LEU 24 27 27 LEU LEU F . n F 1 25 ARG 25 28 28 ARG ARG F . n F 1 26 THR 26 29 29 THR THR F . n F 1 27 TYR 27 30 30 TYR TYR F . n F 1 28 TYR 28 31 31 TYR TYR F . n F 1 29 GLY 29 32 32 GLY GLY F . n F 1 30 ASN 30 33 33 ASN ASN F . n F 1 31 TRP 31 34 34 TRP TRP F . n F 1 32 TYR 32 35 35 TYR TYR F . n F 1 33 GLN 33 36 36 GLN GLN F . n F 1 34 GLN 34 37 37 GLN GLN F . n F 1 35 LYS 35 38 38 LYS LYS F . n F 1 36 PRO 36 39 39 PRO PRO F . n F 1 37 GLY 37 40 40 GLY GLY F . n F 1 38 GLN 38 41 41 GLN GLN F . n F 1 39 ALA 39 42 42 ALA ALA F . n F 1 40 PRO 40 43 43 PRO PRO F . n F 1 41 LEU 41 44 44 LEU LEU F . n F 1 42 LEU 42 45 45 LEU LEU F . n F 1 43 VAL 43 46 46 VAL VAL F . n F 1 44 ILE 44 47 47 ILE ILE F . n F 1 45 TYR 45 48 48 TYR TYR F . n F 1 46 ALA 46 49 49 ALA ALA F . n F 1 47 GLU 47 50 ? ? ? F . n F 1 48 ASN 48 51 ? ? ? F . n F 1 49 LYS 49 52 ? ? ? F . n F 1 50 ARG 50 53 ? ? ? F . n F 1 51 PRO 51 54 ? ? ? F . n F 1 52 SER 52 55 ? ? ? F . n F 1 53 GLY 53 56 ? ? ? F . n F 1 54 ILE 54 57 ? ? ? F . n F 1 55 PRO 55 58 ? ? ? F . n F 1 56 ASP 56 59 ? ? ? F . n F 1 57 ARG 57 60 ? ? ? F . n F 1 58 PHE 58 61 61 PHE PHE F . n F 1 59 SER 59 62 62 SER SER F . n F 1 60 GLY 60 63 63 GLY GLY F . n F 1 61 SER 61 64 64 SER SER F . n F 1 62 ILE 62 65 65 ILE ILE F . n F 1 63 SER 63 66 66 SER SER F . n F 1 64 GLY 64 67 67 GLY GLY F . n F 1 65 ASN 65 68 68 ASN ASN F . n F 1 66 THR 66 69 69 THR THR F . n F 1 67 ALA 67 70 70 ALA ALA F . n F 1 68 SER 68 71 71 SER SER F . n F 1 69 LEU 69 72 72 LEU LEU F . n F 1 70 THR 70 73 73 THR THR F . n F 1 71 ILE 71 74 74 ILE ILE F . n F 1 72 THR 72 75 75 THR THR F . n F 1 73 GLY 73 76 76 GLY GLY F . n F 1 74 ALA 74 77 77 ALA ALA F . n F 1 75 GLN 75 78 78 GLN GLN F . n F 1 76 ALA 76 79 79 ALA ALA F . n F 1 77 GLU 77 80 80 GLU GLU F . n F 1 78 ASP 78 81 81 ASP ASP F . n F 1 79 GLU 79 82 82 GLU GLU F . n F 1 80 ALA 80 83 83 ALA ALA F . n F 1 81 ASP 81 84 84 ASP ASP F . n F 1 82 TYR 82 85 85 TYR TYR F . n F 1 83 PHE 83 86 86 PHE PHE F . n F 1 84 CYS 84 87 87 CYS CYS F . n F 1 85 ASN 85 88 88 ASN ASN F . n F 1 86 SER 86 89 89 SER SER F . n F 1 87 ARG 87 90 90 ARG ARG F . n F 1 88 ASP 88 91 91 ASP ASP F . n F 1 89 THR 89 92 92 THR THR F . n F 1 90 THR 90 93 93 THR THR F . n F 1 91 GLY 91 94 94 GLY GLY F . n F 1 92 ASN 92 95 95 ASN ASN F . n F 1 93 LEU 93 96 96 LEU LEU F . n F 1 94 TRP 94 97 97 TRP TRP F . n F 1 95 VAL 95 98 98 VAL VAL F . n F 1 96 PHE 96 99 99 PHE PHE F . n F 1 97 GLY 97 100 100 GLY GLY F . n F 1 98 GLY 98 101 101 GLY GLY F . n F 1 99 GLY 99 102 102 GLY GLY F . n F 1 100 THR 100 103 103 THR THR F . n F 1 101 LYS 101 104 104 LYS LYS F . n F 1 102 LEU 102 105 105 LEU LEU F . n F 1 103 THR 103 106 106 THR THR F . n F 1 104 VAL 104 107 ? ? ? F . n F 1 105 LEU 105 108 ? ? ? F . n F 1 106 GLY 106 109 ? ? ? F . n F 1 107 GLN 107 110 ? ? ? F . n F 1 108 PRO 108 111 ? ? ? F . n F 1 109 LYS 109 112 ? ? ? F . n F 1 110 ALA 110 113 ? ? ? F . n F 1 111 ALA 111 114 ? ? ? F . n F 1 112 PRO 112 115 ? ? ? F . n F 1 113 SER 113 116 ? ? ? F . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8R47 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8R47 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8R47 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8R47 _struct.title 'AL amyloid fibril from the FOR010 light chain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8R47 _struct_keywords.text 'Amyloid fibril, AL amyloid, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8R47 _struct_ref.pdbx_db_accession 8R47 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8R47 A 1 ? 113 ? 8R47 4 ? 116 ? 4 116 2 1 8R47 B 1 ? 113 ? 8R47 4 ? 116 ? 4 116 3 1 8R47 C 1 ? 113 ? 8R47 4 ? 116 ? 4 116 4 1 8R47 D 1 ? 113 ? 8R47 4 ? 116 ? 4 116 5 1 8R47 E 1 ? 113 ? 8R47 4 ? 116 ? 4 116 6 1 8R47 F 1 ? 113 ? 8R47 4 ? 116 ? 4 116 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 19 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 22 A CYS 87 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? B CYS 19 SG ? ? ? 1_555 B CYS 84 SG ? ? B CYS 22 B CYS 87 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? C CYS 19 SG ? ? ? 1_555 C CYS 84 SG ? ? C CYS 22 C CYS 87 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf4 disulf ? ? D CYS 19 SG ? ? ? 1_555 D CYS 84 SG ? ? D CYS 22 D CYS 87 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf5 disulf ? ? E CYS 19 SG ? ? ? 1_555 E CYS 84 SG ? ? E CYS 22 E CYS 87 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf6 disulf ? ? F CYS 19 SG ? ? ? 1_555 F CYS 84 SG ? ? F CYS 22 F CYS 87 1_555 ? ? ? ? ? ? ? 2.042 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 6 ? AA4 ? 6 ? AA5 ? 6 ? AA6 ? 6 ? AA7 ? 6 ? AA8 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA3 5 6 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA5 5 6 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA6 5 6 ? parallel AA7 1 2 ? parallel AA7 2 3 ? parallel AA7 3 4 ? parallel AA7 4 5 ? parallel AA7 5 6 ? parallel AA8 1 2 ? parallel AA8 2 3 ? parallel AA8 3 4 ? parallel AA8 4 5 ? parallel AA8 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 13 ? CYS A 19 ? GLN A 16 CYS A 22 AA1 2 GLN B 13 ? CYS B 19 ? GLN B 16 CYS B 22 AA1 3 GLN C 13 ? CYS C 19 ? GLN C 16 CYS C 22 AA1 4 GLN D 13 ? CYS D 19 ? GLN D 16 CYS D 22 AA1 5 GLN E 13 ? CYS E 19 ? GLN E 16 CYS E 22 AA1 6 GLN F 13 ? CYS F 19 ? GLN F 16 CYS F 22 AA2 1 SER A 23 ? TYR A 28 ? SER A 26 TYR A 31 AA2 2 SER B 23 ? TYR B 28 ? SER B 26 TYR B 31 AA2 3 SER C 23 ? TYR C 28 ? SER C 26 TYR C 31 AA2 4 SER D 23 ? TYR D 28 ? SER D 26 TYR D 31 AA2 5 SER E 23 ? TYR E 28 ? SER E 26 TYR E 31 AA2 6 SER F 23 ? TYR F 28 ? SER F 26 TYR F 31 AA3 1 TRP A 31 ? GLN A 34 ? TRP A 34 GLN A 37 AA3 2 TRP B 31 ? GLN B 34 ? TRP B 34 GLN B 37 AA3 3 TRP C 31 ? GLN C 34 ? TRP C 34 GLN C 37 AA3 4 TRP D 31 ? GLN D 34 ? TRP D 34 GLN D 37 AA3 5 TRP E 31 ? GLN E 34 ? TRP E 34 GLN E 37 AA3 6 TRP F 31 ? GLN F 34 ? TRP F 34 GLN F 37 AA4 1 LEU A 41 ? TYR A 45 ? LEU A 44 TYR A 48 AA4 2 LEU B 41 ? TYR B 45 ? LEU B 44 TYR B 48 AA4 3 LEU C 41 ? TYR C 45 ? LEU C 44 TYR C 48 AA4 4 LEU D 41 ? TYR D 45 ? LEU D 44 TYR D 48 AA4 5 LEU E 41 ? TYR E 45 ? LEU E 44 TYR E 48 AA4 6 LEU F 41 ? TYR F 45 ? LEU F 44 TYR F 48 AA5 1 THR A 66 ? ILE A 71 ? THR A 69 ILE A 74 AA5 2 THR B 66 ? ILE B 71 ? THR B 69 ILE B 74 AA5 3 THR C 66 ? ILE C 71 ? THR C 69 ILE C 74 AA5 4 THR D 66 ? ILE D 71 ? THR D 69 ILE D 74 AA5 5 THR E 66 ? ILE E 71 ? THR E 69 ILE E 74 AA5 6 THR F 66 ? ILE F 71 ? THR F 69 ILE F 74 AA6 1 ASP A 81 ? PHE A 83 ? ASP A 84 PHE A 86 AA6 2 ASP B 81 ? PHE B 83 ? ASP B 84 PHE B 86 AA6 3 ASP C 81 ? PHE C 83 ? ASP C 84 PHE C 86 AA6 4 ASP D 81 ? PHE D 83 ? ASP D 84 PHE D 86 AA6 5 ASP E 81 ? PHE E 83 ? ASP E 84 PHE E 86 AA6 6 ASP F 81 ? PHE F 83 ? ASP F 84 PHE F 86 AA7 1 VAL A 95 ? PHE A 96 ? VAL A 98 PHE A 99 AA7 2 VAL B 95 ? PHE B 96 ? VAL B 98 PHE B 99 AA7 3 VAL C 95 ? PHE C 96 ? VAL C 98 PHE C 99 AA7 4 VAL D 95 ? PHE D 96 ? VAL D 98 PHE D 99 AA7 5 VAL E 95 ? PHE E 96 ? VAL E 98 PHE E 99 AA7 6 VAL F 95 ? PHE F 96 ? VAL F 98 PHE F 99 AA8 1 LYS A 101 ? LEU A 102 ? LYS A 104 LEU A 105 AA8 2 LYS B 101 ? LEU B 102 ? LYS B 104 LEU B 105 AA8 3 LYS C 101 ? LEU C 102 ? LYS C 104 LEU C 105 AA8 4 LYS D 101 ? LEU D 102 ? LYS D 104 LEU D 105 AA8 5 LYS E 101 ? LEU E 102 ? LYS E 104 LEU E 105 AA8 6 LYS F 101 ? LEU F 102 ? LYS F 104 LEU F 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 16 ? N ARG A 19 O VAL B 15 ? O VAL B 18 AA1 2 3 N ARG B 16 ? N ARG B 19 O VAL C 15 ? O VAL C 18 AA1 3 4 N ARG C 16 ? N ARG C 19 O VAL D 15 ? O VAL D 18 AA1 4 5 N ARG D 16 ? N ARG D 19 O VAL E 15 ? O VAL E 18 AA1 5 6 N ARG E 16 ? N ARG E 19 O VAL F 15 ? O VAL F 18 AA2 1 2 N TYR A 28 ? N TYR A 31 O TYR B 27 ? O TYR B 30 AA2 2 3 N TYR B 28 ? N TYR B 31 O TYR C 27 ? O TYR C 30 AA2 3 4 N TYR C 28 ? N TYR C 31 O TYR D 27 ? O TYR D 30 AA2 4 5 N TYR D 28 ? N TYR D 31 O TYR E 27 ? O TYR E 30 AA2 5 6 N TYR E 28 ? N TYR E 31 O TYR F 27 ? O TYR F 30 AA3 1 2 N TYR A 32 ? N TYR A 35 O GLN B 33 ? O GLN B 36 AA3 2 3 N TYR B 32 ? N TYR B 35 O GLN C 33 ? O GLN C 36 AA3 3 4 N TYR C 32 ? N TYR C 35 O GLN D 33 ? O GLN D 36 AA3 4 5 N TYR D 32 ? N TYR D 35 O GLN E 33 ? O GLN E 36 AA3 5 6 N TYR E 32 ? N TYR E 35 O GLN F 33 ? O GLN F 36 AA4 1 2 N LEU A 41 ? N LEU A 44 O LEU B 42 ? O LEU B 45 AA4 2 3 N LEU B 41 ? N LEU B 44 O LEU C 42 ? O LEU C 45 AA4 3 4 N LEU C 41 ? N LEU C 44 O LEU D 42 ? O LEU D 45 AA4 4 5 N LEU D 41 ? N LEU D 44 O LEU E 42 ? O LEU E 45 AA4 5 6 N LEU E 41 ? N LEU E 44 O LEU F 42 ? O LEU F 45 AA5 1 2 N ALA A 67 ? N ALA A 70 O SER B 68 ? O SER B 71 AA5 2 3 N ALA B 67 ? N ALA B 70 O SER C 68 ? O SER C 71 AA5 3 4 N ALA C 67 ? N ALA C 70 O SER D 68 ? O SER D 71 AA5 4 5 N ALA D 67 ? N ALA D 70 O SER E 68 ? O SER E 71 AA5 5 6 N ALA E 67 ? N ALA E 70 O SER F 68 ? O SER F 71 AA6 1 2 N PHE A 83 ? N PHE A 86 O TYR B 82 ? O TYR B 85 AA6 2 3 N PHE B 83 ? N PHE B 86 O TYR C 82 ? O TYR C 85 AA6 3 4 N PHE C 83 ? N PHE C 86 O TYR D 82 ? O TYR D 85 AA6 4 5 N PHE D 83 ? N PHE D 86 O TYR E 82 ? O TYR E 85 AA6 5 6 N PHE E 83 ? N PHE E 86 O TYR F 82 ? O TYR F 85 AA7 1 2 N PHE A 96 ? N PHE A 99 O VAL B 95 ? O VAL B 98 AA7 2 3 N PHE B 96 ? N PHE B 99 O VAL C 95 ? O VAL C 98 AA7 3 4 N PHE C 96 ? N PHE C 99 O VAL D 95 ? O VAL D 98 AA7 4 5 N PHE D 96 ? N PHE D 99 O VAL E 95 ? O VAL E 98 AA7 5 6 N PHE E 96 ? N PHE E 99 O VAL F 95 ? O VAL F 98 AA8 1 2 N LEU A 102 ? N LEU A 105 O LYS B 101 ? O LYS B 104 AA8 2 3 N LEU B 102 ? N LEU B 105 O LYS C 101 ? O LYS C 104 AA8 3 4 N LEU C 102 ? N LEU C 105 O LYS D 101 ? O LYS D 104 AA8 4 5 N LEU D 102 ? N LEU D 105 O LYS E 101 ? O LYS E 104 AA8 5 6 N LEU E 102 ? N LEU E 105 O LYS F 101 ? O LYS F 104 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 96 ? ? 50.43 -129.48 2 1 LEU B 96 ? ? 50.41 -129.49 3 1 LEU C 96 ? ? 50.39 -129.45 4 1 LEU D 96 ? ? 50.41 -129.49 5 1 LEU E 96 ? ? 50.44 -129.45 6 1 LEU F 96 ? ? 50.42 -129.50 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8R47 _em_3d_fitting.method ? _em_3d_fitting.target_criteria 'correlation coefficient' _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'BACKBONE TRACE' # _em_3d_reconstruction.entry_id 8R47 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.25 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 51394 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'lambda 3 immunoglobulin light chain fragment' _em_entity_assembly.details 'residues 4-116' _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8R47 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 130000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type C-flat-1.2/1.3 _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8R47 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 95 _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument 'LEICA PLUNGER' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8R47 _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 4 ? A LEU 1 2 1 Y 1 A THR 5 ? A THR 2 3 1 Y 1 A GLN 6 ? A GLN 3 4 1 Y 1 A ASP 7 ? A ASP 4 5 1 Y 1 A PRO 8 ? A PRO 5 6 1 Y 1 A ALA 9 ? A ALA 6 7 1 Y 1 A VAL 10 ? A VAL 7 8 1 Y 1 A SER 11 ? A SER 8 9 1 Y 1 A VAL 12 ? A VAL 9 10 1 Y 1 A GLU 50 ? A GLU 47 11 1 Y 1 A ASN 51 ? A ASN 48 12 1 Y 1 A LYS 52 ? A LYS 49 13 1 Y 1 A ARG 53 ? A ARG 50 14 1 Y 1 A PRO 54 ? A PRO 51 15 1 Y 1 A SER 55 ? A SER 52 16 1 Y 1 A GLY 56 ? A GLY 53 17 1 Y 1 A ILE 57 ? A ILE 54 18 1 Y 1 A PRO 58 ? A PRO 55 19 1 Y 1 A ASP 59 ? A ASP 56 20 1 Y 1 A ARG 60 ? A ARG 57 21 1 Y 1 A VAL 107 ? A VAL 104 22 1 Y 1 A LEU 108 ? A LEU 105 23 1 Y 1 A GLY 109 ? A GLY 106 24 1 Y 1 A GLN 110 ? A GLN 107 25 1 Y 1 A PRO 111 ? A PRO 108 26 1 Y 1 A LYS 112 ? A LYS 109 27 1 Y 1 A ALA 113 ? A ALA 110 28 1 Y 1 A ALA 114 ? A ALA 111 29 1 Y 1 A PRO 115 ? A PRO 112 30 1 Y 1 A SER 116 ? A SER 113 31 1 Y 1 B LEU 4 ? B LEU 1 32 1 Y 1 B THR 5 ? B THR 2 33 1 Y 1 B GLN 6 ? B GLN 3 34 1 Y 1 B ASP 7 ? B ASP 4 35 1 Y 1 B PRO 8 ? B PRO 5 36 1 Y 1 B ALA 9 ? B ALA 6 37 1 Y 1 B VAL 10 ? B VAL 7 38 1 Y 1 B SER 11 ? B SER 8 39 1 Y 1 B VAL 12 ? B VAL 9 40 1 Y 1 B GLU 50 ? B GLU 47 41 1 Y 1 B ASN 51 ? B ASN 48 42 1 Y 1 B LYS 52 ? B LYS 49 43 1 Y 1 B ARG 53 ? B ARG 50 44 1 Y 1 B PRO 54 ? B PRO 51 45 1 Y 1 B SER 55 ? B SER 52 46 1 Y 1 B GLY 56 ? B GLY 53 47 1 Y 1 B ILE 57 ? B ILE 54 48 1 Y 1 B PRO 58 ? B PRO 55 49 1 Y 1 B ASP 59 ? B ASP 56 50 1 Y 1 B ARG 60 ? B ARG 57 51 1 Y 1 B VAL 107 ? B VAL 104 52 1 Y 1 B LEU 108 ? B LEU 105 53 1 Y 1 B GLY 109 ? B GLY 106 54 1 Y 1 B GLN 110 ? B GLN 107 55 1 Y 1 B PRO 111 ? B PRO 108 56 1 Y 1 B LYS 112 ? B LYS 109 57 1 Y 1 B ALA 113 ? B ALA 110 58 1 Y 1 B ALA 114 ? B ALA 111 59 1 Y 1 B PRO 115 ? B PRO 112 60 1 Y 1 B SER 116 ? B SER 113 61 1 Y 1 C LEU 4 ? C LEU 1 62 1 Y 1 C THR 5 ? C THR 2 63 1 Y 1 C GLN 6 ? C GLN 3 64 1 Y 1 C ASP 7 ? C ASP 4 65 1 Y 1 C PRO 8 ? C PRO 5 66 1 Y 1 C ALA 9 ? C ALA 6 67 1 Y 1 C VAL 10 ? C VAL 7 68 1 Y 1 C SER 11 ? C SER 8 69 1 Y 1 C VAL 12 ? C VAL 9 70 1 Y 1 C GLU 50 ? C GLU 47 71 1 Y 1 C ASN 51 ? C ASN 48 72 1 Y 1 C LYS 52 ? C LYS 49 73 1 Y 1 C ARG 53 ? C ARG 50 74 1 Y 1 C PRO 54 ? C PRO 51 75 1 Y 1 C SER 55 ? C SER 52 76 1 Y 1 C GLY 56 ? C GLY 53 77 1 Y 1 C ILE 57 ? C ILE 54 78 1 Y 1 C PRO 58 ? C PRO 55 79 1 Y 1 C ASP 59 ? C ASP 56 80 1 Y 1 C ARG 60 ? C ARG 57 81 1 Y 1 C VAL 107 ? C VAL 104 82 1 Y 1 C LEU 108 ? C LEU 105 83 1 Y 1 C GLY 109 ? C GLY 106 84 1 Y 1 C GLN 110 ? C GLN 107 85 1 Y 1 C PRO 111 ? C PRO 108 86 1 Y 1 C LYS 112 ? C LYS 109 87 1 Y 1 C ALA 113 ? C ALA 110 88 1 Y 1 C ALA 114 ? C ALA 111 89 1 Y 1 C PRO 115 ? C PRO 112 90 1 Y 1 C SER 116 ? C SER 113 91 1 Y 1 D LEU 4 ? D LEU 1 92 1 Y 1 D THR 5 ? D THR 2 93 1 Y 1 D GLN 6 ? D GLN 3 94 1 Y 1 D ASP 7 ? D ASP 4 95 1 Y 1 D PRO 8 ? D PRO 5 96 1 Y 1 D ALA 9 ? D ALA 6 97 1 Y 1 D VAL 10 ? D VAL 7 98 1 Y 1 D SER 11 ? D SER 8 99 1 Y 1 D VAL 12 ? D VAL 9 100 1 Y 1 D GLU 50 ? D GLU 47 101 1 Y 1 D ASN 51 ? D ASN 48 102 1 Y 1 D LYS 52 ? D LYS 49 103 1 Y 1 D ARG 53 ? D ARG 50 104 1 Y 1 D PRO 54 ? D PRO 51 105 1 Y 1 D SER 55 ? D SER 52 106 1 Y 1 D GLY 56 ? D GLY 53 107 1 Y 1 D ILE 57 ? D ILE 54 108 1 Y 1 D PRO 58 ? D PRO 55 109 1 Y 1 D ASP 59 ? D ASP 56 110 1 Y 1 D ARG 60 ? D ARG 57 111 1 Y 1 D VAL 107 ? D VAL 104 112 1 Y 1 D LEU 108 ? D LEU 105 113 1 Y 1 D GLY 109 ? D GLY 106 114 1 Y 1 D GLN 110 ? D GLN 107 115 1 Y 1 D PRO 111 ? D PRO 108 116 1 Y 1 D LYS 112 ? D LYS 109 117 1 Y 1 D ALA 113 ? D ALA 110 118 1 Y 1 D ALA 114 ? D ALA 111 119 1 Y 1 D PRO 115 ? D PRO 112 120 1 Y 1 D SER 116 ? D SER 113 121 1 Y 1 E LEU 4 ? E LEU 1 122 1 Y 1 E THR 5 ? E THR 2 123 1 Y 1 E GLN 6 ? E GLN 3 124 1 Y 1 E ASP 7 ? E ASP 4 125 1 Y 1 E PRO 8 ? E PRO 5 126 1 Y 1 E ALA 9 ? E ALA 6 127 1 Y 1 E VAL 10 ? E VAL 7 128 1 Y 1 E SER 11 ? E SER 8 129 1 Y 1 E VAL 12 ? E VAL 9 130 1 Y 1 E GLU 50 ? E GLU 47 131 1 Y 1 E ASN 51 ? E ASN 48 132 1 Y 1 E LYS 52 ? E LYS 49 133 1 Y 1 E ARG 53 ? E ARG 50 134 1 Y 1 E PRO 54 ? E PRO 51 135 1 Y 1 E SER 55 ? E SER 52 136 1 Y 1 E GLY 56 ? E GLY 53 137 1 Y 1 E ILE 57 ? E ILE 54 138 1 Y 1 E PRO 58 ? E PRO 55 139 1 Y 1 E ASP 59 ? E ASP 56 140 1 Y 1 E ARG 60 ? E ARG 57 141 1 Y 1 E VAL 107 ? E VAL 104 142 1 Y 1 E LEU 108 ? E LEU 105 143 1 Y 1 E GLY 109 ? E GLY 106 144 1 Y 1 E GLN 110 ? E GLN 107 145 1 Y 1 E PRO 111 ? E PRO 108 146 1 Y 1 E LYS 112 ? E LYS 109 147 1 Y 1 E ALA 113 ? E ALA 110 148 1 Y 1 E ALA 114 ? E ALA 111 149 1 Y 1 E PRO 115 ? E PRO 112 150 1 Y 1 E SER 116 ? E SER 113 151 1 Y 1 F LEU 4 ? F LEU 1 152 1 Y 1 F THR 5 ? F THR 2 153 1 Y 1 F GLN 6 ? F GLN 3 154 1 Y 1 F ASP 7 ? F ASP 4 155 1 Y 1 F PRO 8 ? F PRO 5 156 1 Y 1 F ALA 9 ? F ALA 6 157 1 Y 1 F VAL 10 ? F VAL 7 158 1 Y 1 F SER 11 ? F SER 8 159 1 Y 1 F VAL 12 ? F VAL 9 160 1 Y 1 F GLU 50 ? F GLU 47 161 1 Y 1 F ASN 51 ? F ASN 48 162 1 Y 1 F LYS 52 ? F LYS 49 163 1 Y 1 F ARG 53 ? F ARG 50 164 1 Y 1 F PRO 54 ? F PRO 51 165 1 Y 1 F SER 55 ? F SER 52 166 1 Y 1 F GLY 56 ? F GLY 53 167 1 Y 1 F ILE 57 ? F ILE 54 168 1 Y 1 F PRO 58 ? F PRO 55 169 1 Y 1 F ASP 59 ? F ASP 56 170 1 Y 1 F ARG 60 ? F ARG 57 171 1 Y 1 F VAL 107 ? F VAL 104 172 1 Y 1 F LEU 108 ? F LEU 105 173 1 Y 1 F GLY 109 ? F GLY 106 174 1 Y 1 F GLN 110 ? F GLN 107 175 1 Y 1 F PRO 111 ? F PRO 108 176 1 Y 1 F LYS 112 ? F LYS 109 177 1 Y 1 F ALA 113 ? F ALA 110 178 1 Y 1 F ALA 114 ? F ALA 111 179 1 Y 1 F PRO 115 ? F PRO 112 180 1 Y 1 F SER 116 ? F SER 113 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 ILE N N N N 137 ILE CA C N S 138 ILE C C N N 139 ILE O O N N 140 ILE CB C N S 141 ILE CG1 C N N 142 ILE CG2 C N N 143 ILE CD1 C N N 144 ILE OXT O N N 145 ILE H H N N 146 ILE H2 H N N 147 ILE HA H N N 148 ILE HB H N N 149 ILE HG12 H N N 150 ILE HG13 H N N 151 ILE HG21 H N N 152 ILE HG22 H N N 153 ILE HG23 H N N 154 ILE HD11 H N N 155 ILE HD12 H N N 156 ILE HD13 H N N 157 ILE HXT H N N 158 LEU N N N N 159 LEU CA C N S 160 LEU C C N N 161 LEU O O N N 162 LEU CB C N N 163 LEU CG C N N 164 LEU CD1 C N N 165 LEU CD2 C N N 166 LEU OXT O N N 167 LEU H H N N 168 LEU H2 H N N 169 LEU HA H N N 170 LEU HB2 H N N 171 LEU HB3 H N N 172 LEU HG H N N 173 LEU HD11 H N N 174 LEU HD12 H N N 175 LEU HD13 H N N 176 LEU HD21 H N N 177 LEU HD22 H N N 178 LEU HD23 H N N 179 LEU HXT H N N 180 LYS N N N N 181 LYS CA C N S 182 LYS C C N N 183 LYS O O N N 184 LYS CB C N N 185 LYS CG C N N 186 LYS CD C N N 187 LYS CE C N N 188 LYS NZ N N N 189 LYS OXT O N N 190 LYS H H N N 191 LYS H2 H N N 192 LYS HA H N N 193 LYS HB2 H N N 194 LYS HB3 H N N 195 LYS HG2 H N N 196 LYS HG3 H N N 197 LYS HD2 H N N 198 LYS HD3 H N N 199 LYS HE2 H N N 200 LYS HE3 H N N 201 LYS HZ1 H N N 202 LYS HZ2 H N N 203 LYS HZ3 H N N 204 LYS HXT H N N 205 PHE N N N N 206 PHE CA C N S 207 PHE C C N N 208 PHE O O N N 209 PHE CB C N N 210 PHE CG C Y N 211 PHE CD1 C Y N 212 PHE CD2 C Y N 213 PHE CE1 C Y N 214 PHE CE2 C Y N 215 PHE CZ C Y N 216 PHE OXT O N N 217 PHE H H N N 218 PHE H2 H N N 219 PHE HA H N N 220 PHE HB2 H N N 221 PHE HB3 H N N 222 PHE HD1 H N N 223 PHE HD2 H N N 224 PHE HE1 H N N 225 PHE HE2 H N N 226 PHE HZ H N N 227 PHE HXT H N N 228 PRO N N N N 229 PRO CA C N S 230 PRO C C N N 231 PRO O O N N 232 PRO CB C N N 233 PRO CG C N N 234 PRO CD C N N 235 PRO OXT O N N 236 PRO H H N N 237 PRO HA H N N 238 PRO HB2 H N N 239 PRO HB3 H N N 240 PRO HG2 H N N 241 PRO HG3 H N N 242 PRO HD2 H N N 243 PRO HD3 H N N 244 PRO HXT H N N 245 SER N N N N 246 SER CA C N S 247 SER C C N N 248 SER O O N N 249 SER CB C N N 250 SER OG O N N 251 SER OXT O N N 252 SER H H N N 253 SER H2 H N N 254 SER HA H N N 255 SER HB2 H N N 256 SER HB3 H N N 257 SER HG H N N 258 SER HXT H N N 259 THR N N N N 260 THR CA C N S 261 THR C C N N 262 THR O O N N 263 THR CB C N R 264 THR OG1 O N N 265 THR CG2 C N N 266 THR OXT O N N 267 THR H H N N 268 THR H2 H N N 269 THR HA H N N 270 THR HB H N N 271 THR HG1 H N N 272 THR HG21 H N N 273 THR HG22 H N N 274 THR HG23 H N N 275 THR HXT H N N 276 TRP N N N N 277 TRP CA C N S 278 TRP C C N N 279 TRP O O N N 280 TRP CB C N N 281 TRP CG C Y N 282 TRP CD1 C Y N 283 TRP CD2 C Y N 284 TRP NE1 N Y N 285 TRP CE2 C Y N 286 TRP CE3 C Y N 287 TRP CZ2 C Y N 288 TRP CZ3 C Y N 289 TRP CH2 C Y N 290 TRP OXT O N N 291 TRP H H N N 292 TRP H2 H N N 293 TRP HA H N N 294 TRP HB2 H N N 295 TRP HB3 H N N 296 TRP HD1 H N N 297 TRP HE1 H N N 298 TRP HE3 H N N 299 TRP HZ2 H N N 300 TRP HZ3 H N N 301 TRP HH2 H N N 302 TRP HXT H N N 303 TYR N N N N 304 TYR CA C N S 305 TYR C C N N 306 TYR O O N N 307 TYR CB C N N 308 TYR CG C Y N 309 TYR CD1 C Y N 310 TYR CD2 C Y N 311 TYR CE1 C Y N 312 TYR CE2 C Y N 313 TYR CZ C Y N 314 TYR OH O N N 315 TYR OXT O N N 316 TYR H H N N 317 TYR H2 H N N 318 TYR HA H N N 319 TYR HB2 H N N 320 TYR HB3 H N N 321 TYR HD1 H N N 322 TYR HD2 H N N 323 TYR HE1 H N N 324 TYR HE2 H N N 325 TYR HH H N N 326 TYR HXT H N N 327 VAL N N N N 328 VAL CA C N S 329 VAL C C N N 330 VAL O O N N 331 VAL CB C N N 332 VAL CG1 C N N 333 VAL CG2 C N N 334 VAL OXT O N N 335 VAL H H N N 336 VAL H2 H N N 337 VAL HA H N N 338 VAL HB H N N 339 VAL HG11 H N N 340 VAL HG12 H N N 341 VAL HG13 H N N 342 VAL HG21 H N N 343 VAL HG22 H N N 344 VAL HG23 H N N 345 VAL HXT H N N 346 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 ILE N CA sing N N 129 ILE N H sing N N 130 ILE N H2 sing N N 131 ILE CA C sing N N 132 ILE CA CB sing N N 133 ILE CA HA sing N N 134 ILE C O doub N N 135 ILE C OXT sing N N 136 ILE CB CG1 sing N N 137 ILE CB CG2 sing N N 138 ILE CB HB sing N N 139 ILE CG1 CD1 sing N N 140 ILE CG1 HG12 sing N N 141 ILE CG1 HG13 sing N N 142 ILE CG2 HG21 sing N N 143 ILE CG2 HG22 sing N N 144 ILE CG2 HG23 sing N N 145 ILE CD1 HD11 sing N N 146 ILE CD1 HD12 sing N N 147 ILE CD1 HD13 sing N N 148 ILE OXT HXT sing N N 149 LEU N CA sing N N 150 LEU N H sing N N 151 LEU N H2 sing N N 152 LEU CA C sing N N 153 LEU CA CB sing N N 154 LEU CA HA sing N N 155 LEU C O doub N N 156 LEU C OXT sing N N 157 LEU CB CG sing N N 158 LEU CB HB2 sing N N 159 LEU CB HB3 sing N N 160 LEU CG CD1 sing N N 161 LEU CG CD2 sing N N 162 LEU CG HG sing N N 163 LEU CD1 HD11 sing N N 164 LEU CD1 HD12 sing N N 165 LEU CD1 HD13 sing N N 166 LEU CD2 HD21 sing N N 167 LEU CD2 HD22 sing N N 168 LEU CD2 HD23 sing N N 169 LEU OXT HXT sing N N 170 LYS N CA sing N N 171 LYS N H sing N N 172 LYS N H2 sing N N 173 LYS CA C sing N N 174 LYS CA CB sing N N 175 LYS CA HA sing N N 176 LYS C O doub N N 177 LYS C OXT sing N N 178 LYS CB CG sing N N 179 LYS CB HB2 sing N N 180 LYS CB HB3 sing N N 181 LYS CG CD sing N N 182 LYS CG HG2 sing N N 183 LYS CG HG3 sing N N 184 LYS CD CE sing N N 185 LYS CD HD2 sing N N 186 LYS CD HD3 sing N N 187 LYS CE NZ sing N N 188 LYS CE HE2 sing N N 189 LYS CE HE3 sing N N 190 LYS NZ HZ1 sing N N 191 LYS NZ HZ2 sing N N 192 LYS NZ HZ3 sing N N 193 LYS OXT HXT sing N N 194 PHE N CA sing N N 195 PHE N H sing N N 196 PHE N H2 sing N N 197 PHE CA C sing N N 198 PHE CA CB sing N N 199 PHE CA HA sing N N 200 PHE C O doub N N 201 PHE C OXT sing N N 202 PHE CB CG sing N N 203 PHE CB HB2 sing N N 204 PHE CB HB3 sing N N 205 PHE CG CD1 doub Y N 206 PHE CG CD2 sing Y N 207 PHE CD1 CE1 sing Y N 208 PHE CD1 HD1 sing N N 209 PHE CD2 CE2 doub Y N 210 PHE CD2 HD2 sing N N 211 PHE CE1 CZ doub Y N 212 PHE CE1 HE1 sing N N 213 PHE CE2 CZ sing Y N 214 PHE CE2 HE2 sing N N 215 PHE CZ HZ sing N N 216 PHE OXT HXT sing N N 217 PRO N CA sing N N 218 PRO N CD sing N N 219 PRO N H sing N N 220 PRO CA C sing N N 221 PRO CA CB sing N N 222 PRO CA HA sing N N 223 PRO C O doub N N 224 PRO C OXT sing N N 225 PRO CB CG sing N N 226 PRO CB HB2 sing N N 227 PRO CB HB3 sing N N 228 PRO CG CD sing N N 229 PRO CG HG2 sing N N 230 PRO CG HG3 sing N N 231 PRO CD HD2 sing N N 232 PRO CD HD3 sing N N 233 PRO OXT HXT sing N N 234 SER N CA sing N N 235 SER N H sing N N 236 SER N H2 sing N N 237 SER CA C sing N N 238 SER CA CB sing N N 239 SER CA HA sing N N 240 SER C O doub N N 241 SER C OXT sing N N 242 SER CB OG sing N N 243 SER CB HB2 sing N N 244 SER CB HB3 sing N N 245 SER OG HG sing N N 246 SER OXT HXT sing N N 247 THR N CA sing N N 248 THR N H sing N N 249 THR N H2 sing N N 250 THR CA C sing N N 251 THR CA CB sing N N 252 THR CA HA sing N N 253 THR C O doub N N 254 THR C OXT sing N N 255 THR CB OG1 sing N N 256 THR CB CG2 sing N N 257 THR CB HB sing N N 258 THR OG1 HG1 sing N N 259 THR CG2 HG21 sing N N 260 THR CG2 HG22 sing N N 261 THR CG2 HG23 sing N N 262 THR OXT HXT sing N N 263 TRP N CA sing N N 264 TRP N H sing N N 265 TRP N H2 sing N N 266 TRP CA C sing N N 267 TRP CA CB sing N N 268 TRP CA HA sing N N 269 TRP C O doub N N 270 TRP C OXT sing N N 271 TRP CB CG sing N N 272 TRP CB HB2 sing N N 273 TRP CB HB3 sing N N 274 TRP CG CD1 doub Y N 275 TRP CG CD2 sing Y N 276 TRP CD1 NE1 sing Y N 277 TRP CD1 HD1 sing N N 278 TRP CD2 CE2 doub Y N 279 TRP CD2 CE3 sing Y N 280 TRP NE1 CE2 sing Y N 281 TRP NE1 HE1 sing N N 282 TRP CE2 CZ2 sing Y N 283 TRP CE3 CZ3 doub Y N 284 TRP CE3 HE3 sing N N 285 TRP CZ2 CH2 doub Y N 286 TRP CZ2 HZ2 sing N N 287 TRP CZ3 CH2 sing Y N 288 TRP CZ3 HZ3 sing N N 289 TRP CH2 HH2 sing N N 290 TRP OXT HXT sing N N 291 TYR N CA sing N N 292 TYR N H sing N N 293 TYR N H2 sing N N 294 TYR CA C sing N N 295 TYR CA CB sing N N 296 TYR CA HA sing N N 297 TYR C O doub N N 298 TYR C OXT sing N N 299 TYR CB CG sing N N 300 TYR CB HB2 sing N N 301 TYR CB HB3 sing N N 302 TYR CG CD1 doub Y N 303 TYR CG CD2 sing Y N 304 TYR CD1 CE1 sing Y N 305 TYR CD1 HD1 sing N N 306 TYR CD2 CE2 doub Y N 307 TYR CD2 HD2 sing N N 308 TYR CE1 CZ doub Y N 309 TYR CE1 HE1 sing N N 310 TYR CE2 CZ sing Y N 311 TYR CE2 HE2 sing N N 312 TYR CZ OH sing N N 313 TYR OH HH sing N N 314 TYR OXT HXT sing N N 315 VAL N CA sing N N 316 VAL N H sing N N 317 VAL N H2 sing N N 318 VAL CA C sing N N 319 VAL CA CB sing N N 320 VAL CA HA sing N N 321 VAL C O doub N N 322 VAL C OXT sing N N 323 VAL CB CG1 sing N N 324 VAL CB CG2 sing N N 325 VAL CB HB sing N N 326 VAL CG1 HG11 sing N N 327 VAL CG1 HG12 sing N N 328 VAL CG1 HG13 sing N N 329 VAL CG2 HG21 sing N N 330 VAL CG2 HG22 sing N N 331 VAL CG2 HG23 sing N N 332 VAL OXT HXT sing N N 333 # _em_admin.current_status REL _em_admin.deposition_date 2023-11-13 _em_admin.deposition_site PDBE _em_admin.entry_id 8R47 _em_admin.last_update 2024-06-26 _em_admin.map_release_date 2024-06-26 _em_admin.title 'AL amyloid fibril from the FOR010 light chain' # _em_buffer_component.buffer_id 1 _em_buffer_component.concentration ? _em_buffer_component.concentration_units ? _em_buffer_component.formula H2O _em_buffer_component.id 1 _em_buffer_component.name Water # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit -1.4634 _em_helical_entity.axial_rise_per_subunit 4.76311 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 3 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'FEI FALCON IV (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 4008 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 414351 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 3.1.3 'IMAGE ACQUISITION' ? 2 ? ? 1 SerialEM ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? CTFFIND 4.1 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? Coot 0.9.2 OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? RELION 3.1.3 # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'German Research Foundation (DFG)' _pdbx_audit_support.country Germany _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8R47 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_