HEADER VIRAL PROTEIN 30-NOV-23 8R9X TITLE LOCAL REFINEMENT OF THE PDCOV SPIKE GLYCOPROTEIN ECTODOMAIN IN COMPLEX TITLE 2 WITH THE 22C10 ANTIBODY FAB FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PDCOV SPIKE GLYCOPROTEIN S1A DOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 22C10 ANTIBODY HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: 22C10 ANTIBODY LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 12 EXPRESSION_SYSTEM_CELL_LINE: 293F; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: 293F KEYWDS SPIKE, CORONAVIRUS, ANTIBODY, COMPLEX, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR O.DEBSKI-ANTONIAK,D.L.HURDISS REVDAT 2 03-JUL-24 8R9X 1 JRNL REVDAT 1 05-JUN-24 8R9X 0 JRNL AUTH W.DU,O.DEBSKI-ANTONIAK,D.DRABEK,R.VAN HAPEREN, JRNL AUTH 2 M.VAN DORTMONDT,J.VAN DER LEE,I.DRULYTE,F.J.M.VAN KUPPEVELD, JRNL AUTH 3 F.GROSVELD,D.L.HURDISS,B.J.BOSCH JRNL TITL NEUTRALIZING ANTIBODIES REVEAL CRYPTIC VULNERABILITIES AND JRNL TITL 2 INTERDOMAIN CROSSTALK IN THE PORCINE DELTACORONAVIRUS SPIKE JRNL TITL 3 PROTEIN. JRNL REF NAT COMMUN V. 15 5330 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38909062 JRNL DOI 10.1038/S41467-024-49693-0 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CRYOSPARC, CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6BFU REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : INITIAL FITTING WAS DONE USING CHIMERA REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 112743 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8R9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1292134909. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : LOCAL REFINEMENT OF THE PDCOV REMARK 245 SPIKE GLYCOPROTEIN ECTODOMAIN REMARK 245 IN COMPLEX WITH THE 22C10 REMARK 245 ANTIBODY FAB FRAGMENT REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 750.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, H, L, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 20 REMARK 465 ASP A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 ASP A 24 REMARK 465 LEU A 25 REMARK 465 LEU A 26 REMARK 465 THR A 27 REMARK 465 PHE A 28 REMARK 465 PRO A 29 REMARK 465 GLY A 30 REMARK 465 ALA A 31 REMARK 465 HIS A 32 REMARK 465 ARG A 33 REMARK 465 PHE A 34 REMARK 465 LEU A 35 REMARK 465 HIS A 36 REMARK 465 LYS A 37 REMARK 465 PRO A 38 REMARK 465 THR A 39 REMARK 465 ARG A 40 REMARK 465 ASN A 41 REMARK 465 SER A 42 REMARK 465 GLU A 278 REMARK 465 ASP A 279 REMARK 465 GLY A 280 REMARK 465 PHE A 281 REMARK 465 TYR A 282 REMARK 465 SER A 283 REMARK 465 ASP A 284 REMARK 465 PRO A 285 REMARK 465 LYS A 286 REMARK 465 SER A 287 REMARK 465 ALA A 288 REMARK 465 VAL A 289 REMARK 465 ARG A 290 REMARK 465 ALA A 291 REMARK 465 ARG A 292 REMARK 465 GLN A 293 REMARK 465 ARG A 294 REMARK 465 THR A 295 REMARK 465 ILE A 296 REMARK 465 VAL A 297 REMARK 465 THR A 298 REMARK 465 LEU A 299 REMARK 465 PRO A 300 REMARK 465 LYS A 301 REMARK 465 LEU A 302 REMARK 465 PRO A 303 REMARK 465 GLU A 304 REMARK 465 LEU A 305 REMARK 465 GLU A 306 REMARK 465 VAL A 307 REMARK 465 VAL A 308 REMARK 465 GLN A 309 REMARK 465 LEU A 310 REMARK 465 ASN A 311 REMARK 465 ILE A 312 REMARK 465 SER A 313 REMARK 465 ALA A 314 REMARK 465 HIS A 315 REMARK 465 MET A 316 REMARK 465 ASP A 317 REMARK 465 PHE A 318 REMARK 465 GLY A 319 REMARK 465 GLU A 320 REMARK 465 ALA A 321 REMARK 465 ARG A 322 REMARK 465 LEU A 323 REMARK 465 ASP A 324 REMARK 465 SER A 325 REMARK 465 VAL A 326 REMARK 465 THR A 327 REMARK 465 ILE A 328 REMARK 465 ASN A 329 REMARK 465 GLY A 330 REMARK 465 ASN A 331 REMARK 465 THR A 332 REMARK 465 SER A 333 REMARK 465 TYR A 334 REMARK 465 CYS A 335 REMARK 465 VAL A 336 REMARK 465 THR A 337 REMARK 465 LYS A 338 REMARK 465 PRO A 339 REMARK 465 TYR A 340 REMARK 465 PHE A 341 REMARK 465 ARG A 342 REMARK 465 LEU A 343 REMARK 465 GLU A 344 REMARK 465 THR A 345 REMARK 465 ASN A 346 REMARK 465 PHE A 347 REMARK 465 MET A 348 REMARK 465 CYS A 349 REMARK 465 THR A 350 REMARK 465 GLY A 351 REMARK 465 CYS A 352 REMARK 465 THR A 353 REMARK 465 MET A 354 REMARK 465 ASN A 355 REMARK 465 LEU A 356 REMARK 465 ARG A 357 REMARK 465 THR A 358 REMARK 465 ASP A 359 REMARK 465 THR A 360 REMARK 465 CYS A 361 REMARK 465 SER A 362 REMARK 465 PHE A 363 REMARK 465 ASP A 364 REMARK 465 LEU A 365 REMARK 465 SER A 366 REMARK 465 ALA A 367 REMARK 465 VAL A 368 REMARK 465 ASN A 369 REMARK 465 ASN A 370 REMARK 465 GLY A 371 REMARK 465 MET A 372 REMARK 465 SER A 373 REMARK 465 PHE A 374 REMARK 465 SER A 375 REMARK 465 GLN A 376 REMARK 465 PHE A 377 REMARK 465 CYS A 378 REMARK 465 LEU A 379 REMARK 465 SER A 380 REMARK 465 THR A 381 REMARK 465 GLU A 382 REMARK 465 SER A 383 REMARK 465 GLY A 384 REMARK 465 ALA A 385 REMARK 465 CYS A 386 REMARK 465 GLU A 387 REMARK 465 MET A 388 REMARK 465 LYS A 389 REMARK 465 ILE A 390 REMARK 465 ILE A 391 REMARK 465 VAL A 392 REMARK 465 THR A 393 REMARK 465 TYR A 394 REMARK 465 VAL A 395 REMARK 465 TRP A 396 REMARK 465 ASN A 397 REMARK 465 TYR A 398 REMARK 465 LEU A 399 REMARK 465 LEU A 400 REMARK 465 ARG A 401 REMARK 465 GLN A 402 REMARK 465 ARG A 403 REMARK 465 LEU A 404 REMARK 465 TYR A 405 REMARK 465 VAL A 406 REMARK 465 THR A 407 REMARK 465 ALA A 408 REMARK 465 VAL A 409 REMARK 465 GLU A 410 REMARK 465 GLY A 411 REMARK 465 GLN A 412 REMARK 465 THR A 413 REMARK 465 HIS A 414 REMARK 465 THR A 415 REMARK 465 GLY A 416 REMARK 465 THR A 417 REMARK 465 THR A 418 REMARK 465 SER A 419 REMARK 465 VAL A 420 REMARK 465 HIS A 421 REMARK 465 ALA A 422 REMARK 465 THR A 423 REMARK 465 ASP A 424 REMARK 465 THR A 425 REMARK 465 SER A 426 REMARK 465 SER A 427 REMARK 465 VAL A 428 REMARK 465 ILE A 429 REMARK 465 THR A 430 REMARK 465 ASP A 431 REMARK 465 VAL A 432 REMARK 465 CYS A 433 REMARK 465 THR A 434 REMARK 465 ASP A 435 REMARK 465 TYR A 436 REMARK 465 THR A 437 REMARK 465 ILE A 438 REMARK 465 TYR A 439 REMARK 465 GLY A 440 REMARK 465 VAL A 441 REMARK 465 SER A 442 REMARK 465 GLY A 443 REMARK 465 THR A 444 REMARK 465 GLY A 445 REMARK 465 ILE A 446 REMARK 465 ILE A 447 REMARK 465 LYS A 448 REMARK 465 PRO A 449 REMARK 465 SER A 450 REMARK 465 ASP A 451 REMARK 465 LEU A 452 REMARK 465 LEU A 453 REMARK 465 LEU A 454 REMARK 465 HIS A 455 REMARK 465 ASN A 456 REMARK 465 GLY A 457 REMARK 465 ILE A 458 REMARK 465 ALA A 459 REMARK 465 PHE A 460 REMARK 465 THR A 461 REMARK 465 SER A 462 REMARK 465 PRO A 463 REMARK 465 THR A 464 REMARK 465 GLY A 465 REMARK 465 GLU A 466 REMARK 465 LEU A 467 REMARK 465 TYR A 468 REMARK 465 ALA A 469 REMARK 465 PHE A 470 REMARK 465 LYS A 471 REMARK 465 ASN A 472 REMARK 465 ILE A 473 REMARK 465 THR A 474 REMARK 465 THR A 475 REMARK 465 GLY A 476 REMARK 465 LYS A 477 REMARK 465 THR A 478 REMARK 465 LEU A 479 REMARK 465 GLN A 480 REMARK 465 VAL A 481 REMARK 465 LEU A 482 REMARK 465 PRO A 483 REMARK 465 CYS A 484 REMARK 465 GLU A 485 REMARK 465 THR A 486 REMARK 465 PRO A 487 REMARK 465 SER A 488 REMARK 465 GLN A 489 REMARK 465 LEU A 490 REMARK 465 ILE A 491 REMARK 465 VAL A 492 REMARK 465 ILE A 493 REMARK 465 ASN A 494 REMARK 465 ASN A 495 REMARK 465 THR A 496 REMARK 465 VAL A 497 REMARK 465 VAL A 498 REMARK 465 GLY A 499 REMARK 465 ALA A 500 REMARK 465 ILE A 501 REMARK 465 THR A 502 REMARK 465 SER A 503 REMARK 465 SER A 504 REMARK 465 ASN A 505 REMARK 465 SER A 506 REMARK 465 THR A 507 REMARK 465 GLU A 508 REMARK 465 ASN A 509 REMARK 465 ASN A 510 REMARK 465 ARG A 511 REMARK 465 PHE A 512 REMARK 465 THR A 513 REMARK 465 THR A 514 REMARK 465 THR A 515 REMARK 465 ILE A 516 REMARK 465 VAL A 517 REMARK 465 THR A 518 REMARK 465 PRO A 519 REMARK 465 THR A 520 REMARK 465 PHE A 521 REMARK 465 PHE A 522 REMARK 465 TYR A 523 REMARK 465 SER A 524 REMARK 465 THR A 525 REMARK 465 ASN A 526 REMARK 465 ALA A 527 REMARK 465 THR A 528 REMARK 465 THR A 529 REMARK 465 PHE A 530 REMARK 465 ASN A 531 REMARK 465 CYS A 532 REMARK 465 THR A 533 REMARK 465 LYS A 534 REMARK 465 PRO A 535 REMARK 465 VAL A 536 REMARK 465 LEU A 537 REMARK 465 SER A 538 REMARK 465 TYR A 539 REMARK 465 GLY A 540 REMARK 465 PRO A 541 REMARK 465 ILE A 542 REMARK 465 SER A 543 REMARK 465 VAL A 544 REMARK 465 CYS A 545 REMARK 465 SER A 546 REMARK 465 ASP A 547 REMARK 465 GLY A 548 REMARK 465 ALA A 549 REMARK 465 ILE A 550 REMARK 465 VAL A 551 REMARK 465 GLY A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 THR A 555 REMARK 465 LEU A 556 REMARK 465 GLN A 557 REMARK 465 ASN A 558 REMARK 465 THR A 559 REMARK 465 ARG A 560 REMARK 465 PRO A 561 REMARK 465 SER A 562 REMARK 465 ILE A 563 REMARK 465 VAL A 564 REMARK 465 SER A 565 REMARK 465 LEU A 566 REMARK 465 TYR A 567 REMARK 465 ASP A 568 REMARK 465 GLY A 569 REMARK 465 GLU A 570 REMARK 465 VAL A 571 REMARK 465 GLU A 572 REMARK 465 ILE A 573 REMARK 465 PRO A 574 REMARK 465 SER A 575 REMARK 465 ALA A 576 REMARK 465 PHE A 577 REMARK 465 SER A 578 REMARK 465 LEU A 579 REMARK 465 SER A 580 REMARK 465 VAL A 581 REMARK 465 GLN A 582 REMARK 465 THR A 583 REMARK 465 GLU A 584 REMARK 465 TYR A 585 REMARK 465 LEU A 586 REMARK 465 GLN A 587 REMARK 465 VAL A 588 REMARK 465 GLN A 589 REMARK 465 ALA A 590 REMARK 465 GLU A 591 REMARK 465 GLN A 592 REMARK 465 VAL A 593 REMARK 465 ILE A 594 REMARK 465 VAL A 595 REMARK 465 ASP A 596 REMARK 465 CYS A 597 REMARK 465 PRO A 598 REMARK 465 GLN A 599 REMARK 465 TYR A 600 REMARK 465 VAL A 601 REMARK 465 CYS A 602 REMARK 465 ASN A 603 REMARK 465 GLY A 604 REMARK 465 ASN A 605 REMARK 465 SER A 606 REMARK 465 ARG A 607 REMARK 465 CYS A 608 REMARK 465 LEU A 609 REMARK 465 GLN A 610 REMARK 465 LEU A 611 REMARK 465 LEU A 612 REMARK 465 ALA A 613 REMARK 465 GLN A 614 REMARK 465 TYR A 615 REMARK 465 THR A 616 REMARK 465 SER A 617 REMARK 465 ALA A 618 REMARK 465 CYS A 619 REMARK 465 SER A 620 REMARK 465 ASN A 621 REMARK 465 ILE A 622 REMARK 465 GLU A 623 REMARK 465 ALA A 624 REMARK 465 ALA A 625 REMARK 465 LEU A 626 REMARK 465 HIS A 627 REMARK 465 SER A 628 REMARK 465 SER A 629 REMARK 465 ALA A 630 REMARK 465 GLN A 631 REMARK 465 LEU A 632 REMARK 465 ASP A 633 REMARK 465 SER A 634 REMARK 465 ARG A 635 REMARK 465 GLU A 636 REMARK 465 ILE A 637 REMARK 465 ILE A 638 REMARK 465 ASN A 639 REMARK 465 MET A 640 REMARK 465 PHE A 641 REMARK 465 GLN A 642 REMARK 465 THR A 643 REMARK 465 SER A 644 REMARK 465 THR A 645 REMARK 465 GLN A 646 REMARK 465 SER A 647 REMARK 465 LEU A 648 REMARK 465 GLN A 649 REMARK 465 LEU A 650 REMARK 465 ALA A 651 REMARK 465 ASN A 652 REMARK 465 ILE A 653 REMARK 465 THR A 654 REMARK 465 ASN A 655 REMARK 465 PHE A 656 REMARK 465 LYS A 657 REMARK 465 GLY A 658 REMARK 465 ASP A 659 REMARK 465 TYR A 660 REMARK 465 ASN A 661 REMARK 465 PHE A 662 REMARK 465 SER A 663 REMARK 465 SER A 664 REMARK 465 ILE A 665 REMARK 465 LEU A 666 REMARK 465 THR A 667 REMARK 465 THR A 668 REMARK 465 ARG A 669 REMARK 465 ILE A 670 REMARK 465 GLY A 671 REMARK 465 GLY A 672 REMARK 465 ARG A 673 REMARK 465 SER A 674 REMARK 465 ALA A 675 REMARK 465 ILE A 676 REMARK 465 GLU A 677 REMARK 465 ASP A 678 REMARK 465 LEU A 679 REMARK 465 LEU A 680 REMARK 465 PHE A 681 REMARK 465 ASN A 682 REMARK 465 LYS A 683 REMARK 465 VAL A 684 REMARK 465 VAL A 685 REMARK 465 THR A 686 REMARK 465 SER A 687 REMARK 465 GLY A 688 REMARK 465 LEU A 689 REMARK 465 GLY A 690 REMARK 465 THR A 691 REMARK 465 VAL A 692 REMARK 465 ASP A 693 REMARK 465 GLN A 694 REMARK 465 ASP A 695 REMARK 465 TYR A 696 REMARK 465 LYS A 697 REMARK 465 SER A 698 REMARK 465 CYS A 699 REMARK 465 SER A 700 REMARK 465 ARG A 701 REMARK 465 ASP A 702 REMARK 465 MET A 703 REMARK 465 ALA A 704 REMARK 465 ILE A 705 REMARK 465 ALA A 706 REMARK 465 ASP A 707 REMARK 465 LEU A 708 REMARK 465 VAL A 709 REMARK 465 CYS A 710 REMARK 465 SER A 711 REMARK 465 GLN A 712 REMARK 465 TYR A 713 REMARK 465 TYR A 714 REMARK 465 ASN A 715 REMARK 465 GLY A 716 REMARK 465 ILE A 717 REMARK 465 MET A 718 REMARK 465 VAL A 719 REMARK 465 LEU A 720 REMARK 465 PRO A 721 REMARK 465 GLY A 722 REMARK 465 VAL A 723 REMARK 465 VAL A 724 REMARK 465 ASP A 725 REMARK 465 ALA A 726 REMARK 465 GLU A 727 REMARK 465 LYS A 728 REMARK 465 MET A 729 REMARK 465 ALA A 730 REMARK 465 MET A 731 REMARK 465 TYR A 732 REMARK 465 THR A 733 REMARK 465 GLY A 734 REMARK 465 SER A 735 REMARK 465 LEU A 736 REMARK 465 THR A 737 REMARK 465 GLY A 738 REMARK 465 ALA A 739 REMARK 465 MET A 740 REMARK 465 VAL A 741 REMARK 465 PHE A 742 REMARK 465 GLY A 743 REMARK 465 GLY A 744 REMARK 465 LEU A 745 REMARK 465 THR A 746 REMARK 465 ALA A 747 REMARK 465 ALA A 748 REMARK 465 ALA A 749 REMARK 465 ALA A 750 REMARK 465 ILE A 751 REMARK 465 PRO A 752 REMARK 465 PHE A 753 REMARK 465 ALA A 754 REMARK 465 THR A 755 REMARK 465 ALA A 756 REMARK 465 VAL A 757 REMARK 465 GLN A 758 REMARK 465 ALA A 759 REMARK 465 ARG A 760 REMARK 465 LEU A 761 REMARK 465 ASN A 762 REMARK 465 TYR A 763 REMARK 465 VAL A 764 REMARK 465 ALA A 765 REMARK 465 LEU A 766 REMARK 465 GLN A 767 REMARK 465 THR A 768 REMARK 465 ASN A 769 REMARK 465 VAL A 770 REMARK 465 LEU A 771 REMARK 465 GLN A 772 REMARK 465 GLU A 773 REMARK 465 ASN A 774 REMARK 465 GLN A 775 REMARK 465 LYS A 776 REMARK 465 ILE A 777 REMARK 465 LEU A 778 REMARK 465 ALA A 779 REMARK 465 GLU A 780 REMARK 465 SER A 781 REMARK 465 PHE A 782 REMARK 465 ASN A 783 REMARK 465 GLN A 784 REMARK 465 ALA A 785 REMARK 465 VAL A 786 REMARK 465 GLY A 787 REMARK 465 ASN A 788 REMARK 465 ILE A 789 REMARK 465 SER A 790 REMARK 465 LEU A 791 REMARK 465 ALA A 792 REMARK 465 LEU A 793 REMARK 465 SER A 794 REMARK 465 SER A 795 REMARK 465 VAL A 796 REMARK 465 ASN A 797 REMARK 465 ASP A 798 REMARK 465 ALA A 799 REMARK 465 ILE A 800 REMARK 465 GLN A 801 REMARK 465 GLN A 802 REMARK 465 THR A 803 REMARK 465 SER A 804 REMARK 465 GLU A 805 REMARK 465 ALA A 806 REMARK 465 LEU A 807 REMARK 465 ASN A 808 REMARK 465 THR A 809 REMARK 465 VAL A 810 REMARK 465 ALA A 811 REMARK 465 ILE A 812 REMARK 465 ALA A 813 REMARK 465 ILE A 814 REMARK 465 LYS A 815 REMARK 465 LYS A 816 REMARK 465 ILE A 817 REMARK 465 GLN A 818 REMARK 465 THR A 819 REMARK 465 VAL A 820 REMARK 465 VAL A 821 REMARK 465 ASN A 822 REMARK 465 GLN A 823 REMARK 465 GLN A 824 REMARK 465 GLY A 825 REMARK 465 GLU A 826 REMARK 465 ALA A 827 REMARK 465 LEU A 828 REMARK 465 SER A 829 REMARK 465 HIS A 830 REMARK 465 LEU A 831 REMARK 465 THR A 832 REMARK 465 ALA A 833 REMARK 465 GLN A 834 REMARK 465 LEU A 835 REMARK 465 SER A 836 REMARK 465 ASN A 837 REMARK 465 ASN A 838 REMARK 465 PHE A 839 REMARK 465 GLN A 840 REMARK 465 ALA A 841 REMARK 465 ILE A 842 REMARK 465 SER A 843 REMARK 465 THR A 844 REMARK 465 SER A 845 REMARK 465 ILE A 846 REMARK 465 GLN A 847 REMARK 465 ASP A 848 REMARK 465 ILE A 849 REMARK 465 TYR A 850 REMARK 465 ASN A 851 REMARK 465 ARG A 852 REMARK 465 LEU A 853 REMARK 465 GLU A 854 REMARK 465 GLU A 855 REMARK 465 VAL A 856 REMARK 465 GLU A 857 REMARK 465 ALA A 858 REMARK 465 ASN A 859 REMARK 465 GLN A 860 REMARK 465 GLN A 861 REMARK 465 VAL A 862 REMARK 465 ASP A 863 REMARK 465 ARG A 864 REMARK 465 LEU A 865 REMARK 465 ILE A 866 REMARK 465 THR A 867 REMARK 465 GLY A 868 REMARK 465 ARG A 869 REMARK 465 LEU A 870 REMARK 465 ALA A 871 REMARK 465 ALA A 872 REMARK 465 LEU A 873 REMARK 465 ASN A 874 REMARK 465 ALA A 875 REMARK 465 TYR A 876 REMARK 465 VAL A 877 REMARK 465 THR A 878 REMARK 465 GLN A 879 REMARK 465 LEU A 880 REMARK 465 LEU A 881 REMARK 465 ASN A 882 REMARK 465 GLN A 883 REMARK 465 MET A 884 REMARK 465 SER A 885 REMARK 465 GLN A 886 REMARK 465 ILE A 887 REMARK 465 ARG A 888 REMARK 465 GLN A 889 REMARK 465 SER A 890 REMARK 465 ARG A 891 REMARK 465 LEU A 892 REMARK 465 LEU A 893 REMARK 465 ALA A 894 REMARK 465 GLN A 895 REMARK 465 GLN A 896 REMARK 465 LYS A 897 REMARK 465 ILE A 898 REMARK 465 ASN A 899 REMARK 465 GLU A 900 REMARK 465 CYS A 901 REMARK 465 VAL A 902 REMARK 465 LYS A 903 REMARK 465 SER A 904 REMARK 465 GLN A 905 REMARK 465 SER A 906 REMARK 465 PRO A 907 REMARK 465 ARG A 908 REMARK 465 TYR A 909 REMARK 465 GLY A 910 REMARK 465 PHE A 911 REMARK 465 CYS A 912 REMARK 465 GLY A 913 REMARK 465 ASN A 914 REMARK 465 GLY A 915 REMARK 465 THR A 916 REMARK 465 HIS A 917 REMARK 465 ILE A 918 REMARK 465 PHE A 919 REMARK 465 SER A 920 REMARK 465 LEU A 921 REMARK 465 THR A 922 REMARK 465 GLN A 923 REMARK 465 THR A 924 REMARK 465 ALA A 925 REMARK 465 PRO A 926 REMARK 465 ASN A 927 REMARK 465 GLY A 928 REMARK 465 ILE A 929 REMARK 465 PHE A 930 REMARK 465 PHE A 931 REMARK 465 MET A 932 REMARK 465 HIS A 933 REMARK 465 ALA A 934 REMARK 465 VAL A 935 REMARK 465 LEU A 936 REMARK 465 VAL A 937 REMARK 465 PRO A 938 REMARK 465 ASN A 939 REMARK 465 LYS A 940 REMARK 465 PHE A 941 REMARK 465 THR A 942 REMARK 465 ARG A 943 REMARK 465 VAL A 944 REMARK 465 ASN A 945 REMARK 465 ALA A 946 REMARK 465 SER A 947 REMARK 465 ALA A 948 REMARK 465 GLY A 949 REMARK 465 ILE A 950 REMARK 465 CYS A 951 REMARK 465 VAL A 952 REMARK 465 ASP A 953 REMARK 465 ASN A 954 REMARK 465 THR A 955 REMARK 465 ARG A 956 REMARK 465 GLY A 957 REMARK 465 TYR A 958 REMARK 465 SER A 959 REMARK 465 LEU A 960 REMARK 465 GLN A 961 REMARK 465 PRO A 962 REMARK 465 GLN A 963 REMARK 465 LEU A 964 REMARK 465 ILE A 965 REMARK 465 LEU A 966 REMARK 465 TYR A 967 REMARK 465 GLN A 968 REMARK 465 PHE A 969 REMARK 465 ASN A 970 REMARK 465 ASN A 971 REMARK 465 SER A 972 REMARK 465 TRP A 973 REMARK 465 ARG A 974 REMARK 465 VAL A 975 REMARK 465 THR A 976 REMARK 465 PRO A 977 REMARK 465 ARG A 978 REMARK 465 ASN A 979 REMARK 465 MET A 980 REMARK 465 TYR A 981 REMARK 465 GLU A 982 REMARK 465 PRO A 983 REMARK 465 ARG A 984 REMARK 465 LEU A 985 REMARK 465 PRO A 986 REMARK 465 ARG A 987 REMARK 465 GLN A 988 REMARK 465 ALA A 989 REMARK 465 ASP A 990 REMARK 465 PHE A 991 REMARK 465 ILE A 992 REMARK 465 GLN A 993 REMARK 465 LEU A 994 REMARK 465 THR A 995 REMARK 465 ASP A 996 REMARK 465 CYS A 997 REMARK 465 SER A 998 REMARK 465 VAL A 999 REMARK 465 THR A 1000 REMARK 465 PHE A 1001 REMARK 465 TYR A 1002 REMARK 465 ASN A 1003 REMARK 465 THR A 1004 REMARK 465 THR A 1005 REMARK 465 ALA A 1006 REMARK 465 ALA A 1007 REMARK 465 ASN A 1008 REMARK 465 LEU A 1009 REMARK 465 PRO A 1010 REMARK 465 ASN A 1011 REMARK 465 ILE A 1012 REMARK 465 ILE A 1013 REMARK 465 PRO A 1014 REMARK 465 ASP A 1015 REMARK 465 ILE A 1016 REMARK 465 ILE A 1017 REMARK 465 ASP A 1018 REMARK 465 VAL A 1019 REMARK 465 ASN A 1020 REMARK 465 GLN A 1021 REMARK 465 THR A 1022 REMARK 465 VAL A 1023 REMARK 465 SER A 1024 REMARK 465 ASP A 1025 REMARK 465 ILE A 1026 REMARK 465 ILE A 1027 REMARK 465 ASP A 1028 REMARK 465 ASN A 1029 REMARK 465 LEU A 1030 REMARK 465 PRO A 1031 REMARK 465 THR A 1032 REMARK 465 ALA A 1033 REMARK 465 THR A 1034 REMARK 465 PRO A 1035 REMARK 465 PRO A 1036 REMARK 465 GLN A 1037 REMARK 465 TRP A 1038 REMARK 465 ASP A 1039 REMARK 465 VAL A 1040 REMARK 465 GLY A 1041 REMARK 465 ILE A 1042 REMARK 465 TYR A 1043 REMARK 465 ASN A 1044 REMARK 465 ASN A 1045 REMARK 465 THR A 1046 REMARK 465 ILE A 1047 REMARK 465 LEU A 1048 REMARK 465 ASN A 1049 REMARK 465 LEU A 1050 REMARK 465 THR A 1051 REMARK 465 VAL A 1052 REMARK 465 GLU A 1053 REMARK 465 ILE A 1054 REMARK 465 ASN A 1055 REMARK 465 ASP A 1056 REMARK 465 LEU A 1057 REMARK 465 GLN A 1058 REMARK 465 GLU A 1059 REMARK 465 ARG A 1060 REMARK 465 SER A 1061 REMARK 465 LYS A 1062 REMARK 465 ASN A 1063 REMARK 465 LEU A 1064 REMARK 465 SER A 1065 REMARK 465 GLN A 1066 REMARK 465 ILE A 1067 REMARK 465 ALA A 1068 REMARK 465 ASP A 1069 REMARK 465 ARG A 1070 REMARK 465 LEU A 1071 REMARK 465 GLN A 1072 REMARK 465 ASN A 1073 REMARK 465 TYR A 1074 REMARK 465 ILE A 1075 REMARK 465 ASP A 1076 REMARK 465 ASN A 1077 REMARK 465 LEU A 1078 REMARK 465 ASN A 1079 REMARK 465 ASN A 1080 REMARK 465 THR A 1081 REMARK 465 LEU A 1082 REMARK 465 VAL A 1083 REMARK 465 ASP A 1084 REMARK 465 LEU A 1085 REMARK 465 GLU A 1086 REMARK 465 TRP A 1087 REMARK 465 LEU A 1088 REMARK 465 ASN A 1089 REMARK 465 ARG A 1090 REMARK 465 VAL A 1091 REMARK 465 GLU A 1092 REMARK 465 THR A 1093 REMARK 465 TYR A 1094 REMARK 465 LEU A 1095 REMARK 465 LYS A 1096 REMARK 465 TRP A 1097 REMARK 465 PRO A 1098 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 75 -159.86 -148.98 REMARK 500 MET A 90 42.08 -103.19 REMARK 500 THR A 98 50.09 -93.25 REMARK 500 THR A 136 26.92 -141.95 REMARK 500 THR A 138 11.39 58.94 REMARK 500 LEU A 175 -10.09 72.76 REMARK 500 ASN A 176 -4.00 -142.33 REMARK 500 ASN A 209 -98.15 54.60 REMARK 500 PRO A 217 46.69 -78.33 REMARK 500 SER L 30 -137.40 53.29 REMARK 500 ALA L 51 -7.96 67.68 REMARK 500 SER L 80 -4.86 67.46 REMARK 500 TRP L 94 -148.77 58.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-19015 RELATED DB: EMDB REMARK 900 LOCAL REFINEMENT OF THE PDCOV SPIKE GLYCOPROTEIN ECTODOMAIN IN REMARK 900 COMPLEX WITH THE 22C10 ANTIBODY FAB FRAGMENT DBREF 8R9X A 20 1098 PDB 8R9X 8R9X 20 1098 DBREF 8R9X H 1 121 PDB 8R9X 8R9X 1 121 DBREF 8R9X L 1 105 PDB 8R9X 8R9X 1 105 SEQRES 1 A 1079 ASP ASP LEU LEU ASP LEU LEU THR PHE PRO GLY ALA HIS SEQRES 2 A 1079 ARG PHE LEU HIS LYS PRO THR ARG ASN SER SER SER LEU SEQRES 3 A 1079 TYR SER ARG ALA ASN ASN ASN PHE ASP VAL GLY VAL LEU SEQRES 4 A 1079 PRO GLY TYR PRO THR LYS ASN VAL ASN LEU PHE SER PRO SEQRES 5 A 1079 LEU THR ASN SER THR LEU PRO ILE ASN GLY LEU HIS ARG SEQRES 6 A 1079 SER TYR GLN PRO LEU MET LEU ASN CYS LEU THR LYS ILE SEQRES 7 A 1079 THR ASN HIS THR LEU SER MET TYR LEU LEU PRO SER GLU SEQRES 8 A 1079 ILE GLN THR TYR SER CYS GLY GLY ALA MET VAL LYS TYR SEQRES 9 A 1079 GLN THR HIS ASP ALA VAL ARG ILE ILE LEU ASP LEU THR SEQRES 10 A 1079 ALA THR ASP HIS ILE SER VAL GLU VAL VAL GLY GLN HIS SEQRES 11 A 1079 GLY GLU ASN TYR VAL PHE VAL CYS SER GLU GLN PHE ASN SEQRES 12 A 1079 TYR THR THR ALA LEU HIS ASN SER THR PHE PHE SER LEU SEQRES 13 A 1079 ASN SER GLU LEU TYR CYS PHE THR ASN ASN THR TYR LEU SEQRES 14 A 1079 GLY ILE LEU PRO PRO ASP LEU THR ASP PHE THR VAL TYR SEQRES 15 A 1079 ARG THR GLY GLN PHE TYR ALA ASN GLY TYR LEU LEU GLY SEQRES 16 A 1079 THR LEU PRO ILE THR VAL ASN TYR VAL ARG LEU TYR ARG SEQRES 17 A 1079 GLY HIS LEU SER ALA ASN SER ALA HIS PHE ALA LEU ALA SEQRES 18 A 1079 ASN LEU THR ASP THR LEU ILE THR LEU THR ASN THR THR SEQRES 19 A 1079 ILE SER GLN ILE THR TYR CYS ASP LYS SER VAL VAL ASP SEQRES 20 A 1079 SER ILE ALA CYS GLN ARG SER SER HIS GLU VAL GLU ASP SEQRES 21 A 1079 GLY PHE TYR SER ASP PRO LYS SER ALA VAL ARG ALA ARG SEQRES 22 A 1079 GLN ARG THR ILE VAL THR LEU PRO LYS LEU PRO GLU LEU SEQRES 23 A 1079 GLU VAL VAL GLN LEU ASN ILE SER ALA HIS MET ASP PHE SEQRES 24 A 1079 GLY GLU ALA ARG LEU ASP SER VAL THR ILE ASN GLY ASN SEQRES 25 A 1079 THR SER TYR CYS VAL THR LYS PRO TYR PHE ARG LEU GLU SEQRES 26 A 1079 THR ASN PHE MET CYS THR GLY CYS THR MET ASN LEU ARG SEQRES 27 A 1079 THR ASP THR CYS SER PHE ASP LEU SER ALA VAL ASN ASN SEQRES 28 A 1079 GLY MET SER PHE SER GLN PHE CYS LEU SER THR GLU SER SEQRES 29 A 1079 GLY ALA CYS GLU MET LYS ILE ILE VAL THR TYR VAL TRP SEQRES 30 A 1079 ASN TYR LEU LEU ARG GLN ARG LEU TYR VAL THR ALA VAL SEQRES 31 A 1079 GLU GLY GLN THR HIS THR GLY THR THR SER VAL HIS ALA SEQRES 32 A 1079 THR ASP THR SER SER VAL ILE THR ASP VAL CYS THR ASP SEQRES 33 A 1079 TYR THR ILE TYR GLY VAL SER GLY THR GLY ILE ILE LYS SEQRES 34 A 1079 PRO SER ASP LEU LEU LEU HIS ASN GLY ILE ALA PHE THR SEQRES 35 A 1079 SER PRO THR GLY GLU LEU TYR ALA PHE LYS ASN ILE THR SEQRES 36 A 1079 THR GLY LYS THR LEU GLN VAL LEU PRO CYS GLU THR PRO SEQRES 37 A 1079 SER GLN LEU ILE VAL ILE ASN ASN THR VAL VAL GLY ALA SEQRES 38 A 1079 ILE THR SER SER ASN SER THR GLU ASN ASN ARG PHE THR SEQRES 39 A 1079 THR THR ILE VAL THR PRO THR PHE PHE TYR SER THR ASN SEQRES 40 A 1079 ALA THR THR PHE ASN CYS THR LYS PRO VAL LEU SER TYR SEQRES 41 A 1079 GLY PRO ILE SER VAL CYS SER ASP GLY ALA ILE VAL GLY SEQRES 42 A 1079 THR SER THR LEU GLN ASN THR ARG PRO SER ILE VAL SER SEQRES 43 A 1079 LEU TYR ASP GLY GLU VAL GLU ILE PRO SER ALA PHE SER SEQRES 44 A 1079 LEU SER VAL GLN THR GLU TYR LEU GLN VAL GLN ALA GLU SEQRES 45 A 1079 GLN VAL ILE VAL ASP CYS PRO GLN TYR VAL CYS ASN GLY SEQRES 46 A 1079 ASN SER ARG CYS LEU GLN LEU LEU ALA GLN TYR THR SER SEQRES 47 A 1079 ALA CYS SER ASN ILE GLU ALA ALA LEU HIS SER SER ALA SEQRES 48 A 1079 GLN LEU ASP SER ARG GLU ILE ILE ASN MET PHE GLN THR SEQRES 49 A 1079 SER THR GLN SER LEU GLN LEU ALA ASN ILE THR ASN PHE SEQRES 50 A 1079 LYS GLY ASP TYR ASN PHE SER SER ILE LEU THR THR ARG SEQRES 51 A 1079 ILE GLY GLY ARG SER ALA ILE GLU ASP LEU LEU PHE ASN SEQRES 52 A 1079 LYS VAL VAL THR SER GLY LEU GLY THR VAL ASP GLN ASP SEQRES 53 A 1079 TYR LYS SER CYS SER ARG ASP MET ALA ILE ALA ASP LEU SEQRES 54 A 1079 VAL CYS SER GLN TYR TYR ASN GLY ILE MET VAL LEU PRO SEQRES 55 A 1079 GLY VAL VAL ASP ALA GLU LYS MET ALA MET TYR THR GLY SEQRES 56 A 1079 SER LEU THR GLY ALA MET VAL PHE GLY GLY LEU THR ALA SEQRES 57 A 1079 ALA ALA ALA ILE PRO PHE ALA THR ALA VAL GLN ALA ARG SEQRES 58 A 1079 LEU ASN TYR VAL ALA LEU GLN THR ASN VAL LEU GLN GLU SEQRES 59 A 1079 ASN GLN LYS ILE LEU ALA GLU SER PHE ASN GLN ALA VAL SEQRES 60 A 1079 GLY ASN ILE SER LEU ALA LEU SER SER VAL ASN ASP ALA SEQRES 61 A 1079 ILE GLN GLN THR SER GLU ALA LEU ASN THR VAL ALA ILE SEQRES 62 A 1079 ALA ILE LYS LYS ILE GLN THR VAL VAL ASN GLN GLN GLY SEQRES 63 A 1079 GLU ALA LEU SER HIS LEU THR ALA GLN LEU SER ASN ASN SEQRES 64 A 1079 PHE GLN ALA ILE SER THR SER ILE GLN ASP ILE TYR ASN SEQRES 65 A 1079 ARG LEU GLU GLU VAL GLU ALA ASN GLN GLN VAL ASP ARG SEQRES 66 A 1079 LEU ILE THR GLY ARG LEU ALA ALA LEU ASN ALA TYR VAL SEQRES 67 A 1079 THR GLN LEU LEU ASN GLN MET SER GLN ILE ARG GLN SER SEQRES 68 A 1079 ARG LEU LEU ALA GLN GLN LYS ILE ASN GLU CYS VAL LYS SEQRES 69 A 1079 SER GLN SER PRO ARG TYR GLY PHE CYS GLY ASN GLY THR SEQRES 70 A 1079 HIS ILE PHE SER LEU THR GLN THR ALA PRO ASN GLY ILE SEQRES 71 A 1079 PHE PHE MET HIS ALA VAL LEU VAL PRO ASN LYS PHE THR SEQRES 72 A 1079 ARG VAL ASN ALA SER ALA GLY ILE CYS VAL ASP ASN THR SEQRES 73 A 1079 ARG GLY TYR SER LEU GLN PRO GLN LEU ILE LEU TYR GLN SEQRES 74 A 1079 PHE ASN ASN SER TRP ARG VAL THR PRO ARG ASN MET TYR SEQRES 75 A 1079 GLU PRO ARG LEU PRO ARG GLN ALA ASP PHE ILE GLN LEU SEQRES 76 A 1079 THR ASP CYS SER VAL THR PHE TYR ASN THR THR ALA ALA SEQRES 77 A 1079 ASN LEU PRO ASN ILE ILE PRO ASP ILE ILE ASP VAL ASN SEQRES 78 A 1079 GLN THR VAL SER ASP ILE ILE ASP ASN LEU PRO THR ALA SEQRES 79 A 1079 THR PRO PRO GLN TRP ASP VAL GLY ILE TYR ASN ASN THR SEQRES 80 A 1079 ILE LEU ASN LEU THR VAL GLU ILE ASN ASP LEU GLN GLU SEQRES 81 A 1079 ARG SER LYS ASN LEU SER GLN ILE ALA ASP ARG LEU GLN SEQRES 82 A 1079 ASN TYR ILE ASP ASN LEU ASN ASN THR LEU VAL ASP LEU SEQRES 83 A 1079 GLU TRP LEU ASN ARG VAL GLU THR TYR LEU LYS TRP PRO SEQRES 1 H 121 GLU VAL ARG LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 121 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 121 PHE THR PHE SER SER TYR ALA MET SER TRP VAL ARG GLN SEQRES 4 H 121 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER ILE ILE THR SEQRES 5 H 121 ASP SER GLY GLY GLY THR TYR PHE ALA ASP SER VAL LYS SEQRES 6 H 121 GLY ARG PHE THR ILE SER ARG ASP ASN SER LYS ASN THR SEQRES 7 H 121 LEU TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 121 ALA LEU TYR TYR CYS VAL LYS VAL GLY PHE CYS TYR SER SEQRES 9 H 121 SER THR CYS PRO PHE ASP TYR TRP GLY GLN GLY THR LEU SEQRES 10 H 121 VAL THR VAL SER SEQRES 1 L 105 GLU LEU VAL MET THR GLN SER PRO ALA THR LEU SER VAL SEQRES 2 L 105 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 105 GLN SER VAL SER SER ASP LEU ALA TRP TYR GLN GLN ARG SEQRES 4 L 105 PRO GLY ARG ALA PRO ARG LEU LEU ILE TYR ASP ALA SER SEQRES 5 L 105 THR ARG THR THR GLY ILE PRO ALA ARG PHE SER GLY SER SEQRES 6 L 105 GLY SER GLY THR GLU PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 105 GLN SER GLU ASP PHE ALA VAL TYR TYR CYS HIS GLN TYR SEQRES 8 L 105 ASN ASN TRP LEU THR PHE GLY GLN GLY THR ARG LEU GLU SEQRES 9 L 105 ILE HET NAG B 1 14 HET NAG B 2 14 HET FUC B 3 10 HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET MAN D 5 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG A1101 14 HET NAG A1102 14 HET NAG A1103 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 4 NAG 11(C8 H15 N O6) FORMUL 4 FUC C6 H12 O5 FORMUL 6 BMA C6 H12 O6 FORMUL 6 MAN 2(C6 H12 O6) HELIX 1 AA1 ASN A 65 PHE A 69 5 5 HELIX 2 AA2 GLY A 117 GLN A 124 5 8 HELIX 3 AA3 ASN A 162 ASN A 169 1 8 HELIX 4 AA4 SER A 263 ARG A 272 1 10 HELIX 5 AA5 THR H 28 TYR H 32 5 5 HELIX 6 AA6 ARG H 87 THR H 91 5 5 SHEET 1 AA1 3 ASN A 80 PRO A 88 0 SHEET 2 AA1 3 LEU A 242 THR A 250 -1 O ILE A 247 N HIS A 83 SHEET 3 AA1 3 ILE A 254 TYR A 259 -1 O THR A 258 N LEU A 246 SHEET 1 AA2 6 THR A 95 LYS A 96 0 SHEET 2 AA2 6 SER A 234 ALA A 240 -1 O PHE A 237 N THR A 95 SHEET 3 AA2 6 ALA A 128 ASP A 134 -1 N ILE A 132 O HIS A 236 SHEET 4 AA2 6 ASP A 197 TYR A 201 -1 O PHE A 198 N ILE A 131 SHEET 5 AA2 6 GLN A 205 ALA A 208 -1 O GLN A 205 N TYR A 201 SHEET 6 AA2 6 TYR A 211 THR A 215 -1 O TYR A 211 N ALA A 208 SHEET 1 AA3 6 THR A 101 TYR A 105 0 SHEET 2 AA3 6 VAL A 220 ARG A 227 -1 O VAL A 223 N MET A 104 SHEET 3 AA3 6 ILE A 141 GLY A 147 -1 N GLU A 144 O ARG A 224 SHEET 4 AA3 6 ASN A 152 SER A 158 -1 O TYR A 153 N VAL A 145 SHEET 5 AA3 6 TYR A 180 THR A 183 -1 O PHE A 182 N VAL A 156 SHEET 6 AA3 6 THR A 186 ILE A 190 -1 O LEU A 188 N CYS A 181 SHEET 1 AA4 4 ARG H 3 SER H 7 0 SHEET 2 AA4 4 SER H 17 SER H 25 -1 O SER H 25 N ARG H 3 SHEET 3 AA4 4 THR H 78 ASN H 84 -1 O LEU H 79 N CYS H 22 SHEET 4 AA4 4 PHE H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA5 6 LEU H 11 VAL H 12 0 SHEET 2 AA5 6 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA5 6 ALA H 92 VAL H 99 -1 N TYR H 94 O THR H 116 SHEET 4 AA5 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA5 6 LEU H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AA5 6 THR H 58 PHE H 60 -1 O TYR H 59 N ILE H 50 SHEET 1 AA6 4 LEU H 11 VAL H 12 0 SHEET 2 AA6 4 THR H 116 VAL H 120 1 O THR H 119 N VAL H 12 SHEET 3 AA6 4 ALA H 92 VAL H 99 -1 N TYR H 94 O THR H 116 SHEET 4 AA6 4 PHE H 109 TRP H 112 -1 O TYR H 111 N LYS H 98 SHEET 1 AA7 4 MET L 4 THR L 5 0 SHEET 2 AA7 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 GLU L 70 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 4 AA7 4 PHE L 62 SER L 65 -1 N SER L 63 O THR L 74 SHEET 1 AA8 2 THR L 10 SER L 12 0 SHEET 2 AA8 2 ARG L 102 GLU L 104 1 O GLU L 104 N LEU L 11 SHEET 1 AA9 5 THR L 53 ARG L 54 0 SHEET 2 AA9 5 ARG L 45 TYR L 49 -1 N TYR L 49 O THR L 53 SHEET 3 AA9 5 LEU L 33 GLN L 37 -1 N TRP L 35 O ILE L 48 SHEET 4 AA9 5 CYS L 88 GLN L 90 -1 O HIS L 89 N ALA L 34 SHEET 5 AA9 5 THR L 96 PHE L 97 -1 O THR L 96 N GLN L 90 SSBOND 1 CYS A 93 CYS A 116 1555 1555 2.03 SSBOND 2 CYS A 157 CYS A 181 1555 1555 2.03 SSBOND 3 CYS A 260 CYS A 270 1555 1555 2.03 SSBOND 4 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 5 CYS L 23 CYS L 88 1555 1555 2.03 LINK ND2 ASN A 74 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN A 99 C1 NAG B 1 1555 1555 1.44 LINK ND2 ASN A 162 C1 NAG A1101 1555 1555 1.44 LINK ND2 ASN A 169 C1 NAG A1102 1555 1555 1.45 LINK ND2 ASN A 184 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 241 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 251 C1 NAG A1103 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 3 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.43 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.45 LINK O6 BMA D 3 C1 MAN D 5 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.44 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000