HEADER RNA BINDING PROTEIN 07-DEC-23 8RD3 TITLE CRYSTAL STRUCTURE OF SACCHAROMYCES CEREVISIAE NMD4 PROTEIN BOUND TO TITLE 2 UPF1 HELICASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-DEPENDENT HELICASE NAM7; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: NONSENSE-MEDIATED DECAY PROTEIN 4; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 3 ORGANISM_TAXID: 559292; SOURCE 4 GENE: NAM7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE S288C; SOURCE 10 ORGANISM_TAXID: 559292; SOURCE 11 GENE: NMD4; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 14 EXPRESSION_SYSTEM_VARIANT: GOLD KEYWDS NONSENSE-MEDIATED MRNA DECAY, PIN DOMAIN, HELICASE, PROTEIN COMPLEX, KEYWDS 2 RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.BARBARIN-BOCAHU,M.GRAILLE REVDAT 2 09-OCT-24 8RD3 1 REMARK REVDAT 1 14-AUG-24 8RD3 0 JRNL AUTH I.BARBARIN-BOCAHU,N.ULRYCK,A.RIGOBERT,N.RUIZ GUTIERREZ, JRNL AUTH 2 L.DECOURTY,M.RAJI,B.GARKHAL,H.LE HIR,C.SAVEANU,M.GRAILLE JRNL TITL STRUCTURE OF A YEAST PROTEIN COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.3 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 74.5 REMARK 3 NUMBER OF REFLECTIONS : 38847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1999 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 9.13 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2642 REMARK 3 BIN FREE R VALUE : 0.2575 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 47 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6759 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 76.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -5.09560 REMARK 3 B22 (A**2) : -3.77770 REMARK 3 B33 (A**2) : 8.87330 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.360 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.399 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.241 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.417 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.247 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6936 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 9349 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2483 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1165 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 6936 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 894 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5053 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 0.94 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.92 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 18.35 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 26.2685 21.704 56.0879 REMARK 3 T TENSOR REMARK 3 T11: -0.1179 T22: -0.1058 REMARK 3 T33: 0.0197 T12: -0.0029 REMARK 3 T13: -0.0484 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.0506 L22: 1.0773 REMARK 3 L33: 0.4429 L12: 0.4288 REMARK 3 L13: -0.154 L23: -0.1916 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: 0.0446 S13: -0.0361 REMARK 3 S21: 0.0446 S22: -0.0452 S23: 0.0391 REMARK 3 S31: -0.0361 S32: 0.0391 S33: 0.0305 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 40.3013 22.3151 22.4073 REMARK 3 T TENSOR REMARK 3 T11: -0.0363 T22: -0.1213 REMARK 3 T33: -0.0259 T12: 0.0115 REMARK 3 T13: -0.0917 T23: -0.0542 REMARK 3 L TENSOR REMARK 3 L11: 1.8146 L22: 1.7613 REMARK 3 L33: 3.2912 L12: 0.5946 REMARK 3 L13: 0.1391 L23: 0.7377 REMARK 3 S TENSOR REMARK 3 S11: 0.1558 S12: -0.2305 S13: 0.5511 REMARK 3 S21: -0.2305 S22: -0.0757 S23: 0.0517 REMARK 3 S31: 0.5511 S32: 0.0517 S33: -0.0801 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RD3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-DEC-23. REMARK 100 THE DEPOSITION ID IS D_1292135212. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38847 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.6 REMARK 200 DATA REDUNDANCY : 40.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% TACSIMATE PH 7, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 59.67500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 65.58000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 84.77500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 59.67500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 65.58000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 84.77500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 59.67500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 65.58000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 84.77500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 59.67500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 65.58000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 84.77500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 218 REMARK 465 ALA A 219 REMARK 465 SER A 220 REMARK 465 GLU A 221 REMARK 465 GLN A 222 REMARK 465 GLU A 223 REMARK 465 HIS A 852 REMARK 465 HIS A 853 REMARK 465 HIS A 854 REMARK 465 HIS A 855 REMARK 465 HIS A 856 REMARK 465 HIS A 857 REMARK 465 GLY B -2 REMARK 465 PRO B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 274 2.25 -68.97 REMARK 500 ASN A 322 -169.19 -124.67 REMARK 500 ASP A 563 48.34 -87.20 REMARK 500 VAL A 587 40.53 -96.00 REMARK 500 GLN A 601 -169.05 -109.56 REMARK 500 VAL A 778 -50.28 67.24 REMARK 500 ALA A 780 107.36 -160.90 REMARK 500 ASP A 791 109.64 -54.49 REMARK 500 LYS B 71 61.94 -102.77 REMARK 500 LEU B 125 -154.65 -101.37 REMARK 500 REMARK 500 REMARK: NULL DBREF 8RD3 A 221 851 UNP P30771 RENT1_YEAST 221 851 DBREF 8RD3 B 2 218 UNP Q12129 NMD4_YEAST 2 218 SEQADV 8RD3 MET A 218 UNP P30771 INITIATING METHIONINE SEQADV 8RD3 ALA A 219 UNP P30771 EXPRESSION TAG SEQADV 8RD3 SER A 220 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 852 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 853 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 854 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 855 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 856 UNP P30771 EXPRESSION TAG SEQADV 8RD3 HIS A 857 UNP P30771 EXPRESSION TAG SEQADV 8RD3 GLY B -2 UNP Q12129 EXPRESSION TAG SEQADV 8RD3 PRO B -1 UNP Q12129 EXPRESSION TAG SEQADV 8RD3 GLY B 0 UNP Q12129 EXPRESSION TAG SEQADV 8RD3 SER B 1 UNP Q12129 EXPRESSION TAG SEQRES 1 A 640 MET ALA SER GLU GLN GLU ALA ILE PRO PRO LEU LEU LEU SEQRES 2 A 640 ARG TYR GLN ASP ALA TYR GLU TYR GLN ARG SER TYR GLY SEQRES 3 A 640 PRO LEU ILE LYS LEU GLU ALA ASP TYR ASP LYS GLN LEU SEQRES 4 A 640 LYS GLU SER GLN ALA LEU GLU HIS ILE SER VAL SER TRP SEQRES 5 A 640 SER LEU ALA LEU ASN ASN ARG HIS LEU ALA SER PHE THR SEQRES 6 A 640 LEU SER THR PHE GLU SER ASN GLU LEU LYS VAL ALA ILE SEQRES 7 A 640 GLY ASP GLU MET ILE LEU TRP TYR SER GLY MET GLN HIS SEQRES 8 A 640 PRO ASP TRP GLU GLY ARG GLY TYR ILE VAL ARG LEU PRO SEQRES 9 A 640 ASN SER PHE GLN ASP THR PHE THR LEU GLU LEU LYS PRO SEQRES 10 A 640 SER LYS THR PRO PRO PRO THR HIS LEU THR THR GLY PHE SEQRES 11 A 640 THR ALA GLU PHE ILE TRP LYS GLY THR SER TYR ASP ARG SEQRES 12 A 640 MET GLN ASP ALA LEU LYS LYS PHE ALA ILE ASP LYS LYS SEQRES 13 A 640 SER ILE SER GLY TYR LEU TYR TYR LYS ILE LEU GLY HIS SEQRES 14 A 640 GLN VAL VAL ASP ILE SER PHE ASP VAL PRO LEU PRO LYS SEQRES 15 A 640 GLU PHE SER ILE PRO ASN PHE ALA GLN LEU ASN SER SER SEQRES 16 A 640 GLN SER ASN ALA VAL SER HIS VAL LEU GLN ARG PRO LEU SEQRES 17 A 640 SER LEU ILE GLN GLY PRO PRO GLY THR GLY LYS THR VAL SEQRES 18 A 640 THR SER ALA THR ILE VAL TYR HIS LEU SER LYS ILE HIS SEQRES 19 A 640 LYS ASP ARG ILE LEU VAL CYS ALA PRO SER ASN VAL ALA SEQRES 20 A 640 VAL ASP HIS LEU ALA ALA LYS LEU ARG ASP LEU GLY LEU SEQRES 21 A 640 LYS VAL VAL ARG LEU THR ALA LYS SER ARG GLU ASP VAL SEQRES 22 A 640 GLU SER SER VAL SER ASN LEU ALA LEU HIS ASN LEU VAL SEQRES 23 A 640 GLY ARG GLY ALA LYS GLY GLU LEU LYS ASN LEU LEU LYS SEQRES 24 A 640 LEU LYS ASP GLU VAL GLY GLU LEU SER ALA SER ASP THR SEQRES 25 A 640 LYS ARG PHE VAL LYS LEU VAL ARG LYS THR GLU ALA GLU SEQRES 26 A 640 ILE LEU ASN LYS ALA ASP VAL VAL CYS CYS THR CYS VAL SEQRES 27 A 640 GLY ALA GLY ASP LYS ARG LEU ASP THR LYS PHE ARG THR SEQRES 28 A 640 VAL LEU ILE ASP GLU SER THR GLN ALA SER GLU PRO GLU SEQRES 29 A 640 CYS LEU ILE PRO ILE VAL LYS GLY ALA LYS GLN VAL ILE SEQRES 30 A 640 LEU VAL GLY ASP HIS GLN GLN LEU GLY PRO VAL ILE LEU SEQRES 31 A 640 GLU ARG LYS ALA ALA ASP ALA GLY LEU LYS GLN SER LEU SEQRES 32 A 640 PHE GLU ARG LEU ILE SER LEU GLY HIS VAL PRO ILE ARG SEQRES 33 A 640 LEU GLU VAL GLN TYR ARG MET ASN PRO TYR LEU SER GLU SEQRES 34 A 640 PHE PRO SER ASN MET PHE TYR GLU GLY SER LEU GLN ASN SEQRES 35 A 640 GLY VAL THR ILE GLU GLN ARG THR VAL PRO ASN SER LYS SEQRES 36 A 640 PHE PRO TRP PRO ILE ARG GLY ILE PRO MET MET PHE TRP SEQRES 37 A 640 ALA ASN TYR GLY ARG GLU GLU ILE SER ALA ASN GLY THR SEQRES 38 A 640 SER PHE LEU ASN ARG ILE GLU ALA MET ASN CYS GLU ARG SEQRES 39 A 640 ILE ILE THR LYS LEU PHE ARG ASP GLY VAL LYS PRO GLU SEQRES 40 A 640 GLN ILE GLY VAL ILE THR PRO TYR GLU GLY GLN ARG ALA SEQRES 41 A 640 TYR ILE LEU GLN TYR MET GLN MET ASN GLY SER LEU ASP SEQRES 42 A 640 LYS ASP LEU TYR ILE LYS VAL GLU VAL ALA SER VAL ASP SEQRES 43 A 640 ALA PHE GLN GLY ARG GLU LYS ASP TYR ILE ILE LEU SER SEQRES 44 A 640 CYS VAL ARG ALA ASN GLU GLN GLN ALA ILE GLY PHE LEU SEQRES 45 A 640 ARG ASP PRO ARG ARG LEU ASN VAL GLY LEU THR ARG ALA SEQRES 46 A 640 LYS TYR GLY LEU VAL ILE LEU GLY ASN PRO ARG SER LEU SEQRES 47 A 640 ALA ARG ASN THR LEU TRP ASN HIS LEU LEU ILE HIS PHE SEQRES 48 A 640 ARG GLU LYS GLY CYS LEU VAL GLU GLY THR LEU ASP ASN SEQRES 49 A 640 LEU GLN LEU CYS THR VAL GLN LEU VAL ARG HIS HIS HIS SEQRES 50 A 640 HIS HIS HIS SEQRES 1 B 221 GLY PRO GLY SER THR GLN TYR ASN PHE ILE ILE ASP ALA SEQRES 2 B 221 SER ALA PHE GLU LYS GLY LEU GLY ASN ILE LYS ARG TRP SEQRES 3 B 221 CYS SER ASP CME THR GLU ALA VAL THR LEU ASN PHE TYR SEQRES 4 B 221 ILE PRO THR PHE THR LEU ASN GLU LEU ASP PHE LEU GLN SEQRES 5 B 221 GLN ARG ARG LYS SER PHE ALA ALA ARG GLU SER LEU LYS SEQRES 6 B 221 PHE ILE ASP ARG LEU ASP ASP SER LYS PHE ALA ASN LEU SEQRES 7 B 221 LYS VAL PHE ILE GLU PHE PRO GLU VAL LEU ASP ILE ILE SEQRES 8 B 221 LEU TRP SER ASP VAL MET GLU HIS ASN ASP SER SER GLY SEQRES 9 B 221 LYS ILE ASN ILE ALA LYS LEU PRO LYS ARG LEU LYS ASN SEQRES 10 B 221 LEU LEU LYS SER CYS ILE TYR LYS CYS TYR LEU GLU GLY SEQRES 11 B 221 ASN GLU GLY LEU HIS TRP PHE LEU ILE SER GLU ASP PRO SEQRES 12 B 221 GLN ILE ARG GLU MET ALA MET GLN CYS ASN ILE PRO SER SEQRES 13 B 221 CYS SER ILE VAL ASP VAL ASP SER ILE LEU SER LYS ASP SEQRES 14 B 221 MET ASN ASP LYS SER PHE ARG GLU SER GLU LYS PHE ASN SEQRES 15 B 221 ASN MET MET LEU LYS ASN GLY THR LYS GLU GLU SER GLU SEQRES 16 B 221 ASN GLY ARG GLU ILE ILE ARG THR ASN PHE ASN LYS THR SEQRES 17 B 221 VAL TYR ALA SER ARG GLY THR GLY GLU LEU TRP SER PRO MODRES 8RD3 CME B 27 CYS MODIFIED RESIDUE HET CME B 27 10 HET EDO A 901 4 HET SIN A 902 8 HET EDO A 903 4 HET EDO A 904 4 HET EDO A 905 4 HET EDO A 906 4 HET FMT A 907 3 HET EDO A 908 4 HET EDO A 909 4 HET MLA A 910 7 HET EDO A 911 4 HET EDO B 301 4 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE HETNAM EDO 1,2-ETHANEDIOL HETNAM SIN SUCCINIC ACID HETNAM FMT FORMIC ACID HETNAM MLA MALONIC ACID HETSYN EDO ETHYLENE GLYCOL HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 CME C5 H11 N O3 S2 FORMUL 3 EDO 9(C2 H6 O2) FORMUL 4 SIN C4 H6 O4 FORMUL 9 FMT C H2 O2 FORMUL 12 MLA C3 H4 O4 FORMUL 15 HOH *80(H2 O) HELIX 1 AA1 ASP A 234 ALA A 261 1 28 HELIX 2 AA2 GLU A 287 LEU A 291 5 5 HELIX 3 AA3 GLY A 355 ASP A 371 1 17 HELIX 4 AA4 SER A 376 GLY A 385 1 10 HELIX 5 AA5 ASN A 410 LEU A 421 1 12 HELIX 6 AA6 GLY A 435 LYS A 452 1 18 HELIX 7 AA7 SER A 461 LEU A 475 1 15 HELIX 8 AA8 ALA A 484 GLU A 488 5 5 HELIX 9 AA9 VAL A 494 LEU A 497 5 4 HELIX 10 AB1 ALA A 498 GLY A 506 1 9 HELIX 11 AB2 GLY A 509 GLY A 522 1 14 HELIX 12 AB3 SER A 525 ALA A 547 1 23 HELIX 13 AB4 VAL A 555 ASP A 563 5 9 HELIX 14 AB5 GLU A 573 ALA A 577 5 5 HELIX 15 AB6 SER A 578 VAL A 587 1 10 HELIX 16 AB7 GLU A 608 GLY A 615 1 8 HELIX 17 AB8 SER A 619 LEU A 627 1 9 HELIX 18 AB9 ASN A 641 TYR A 653 1 13 HELIX 19 AC1 ASN A 702 ASP A 719 1 18 HELIX 20 AC2 LYS A 722 GLU A 724 5 3 HELIX 21 AC3 TYR A 732 GLY A 747 1 16 HELIX 22 AC4 ASP A 750 LYS A 756 1 7 HELIX 23 AC5 SER A 761 GLN A 766 1 6 HELIX 24 AC6 ILE A 786 ARG A 790 5 5 HELIX 25 AC7 ASP A 791 THR A 800 1 10 HELIX 26 AC8 ASN A 811 ALA A 816 1 6 HELIX 27 AC9 ASN A 818 LYS A 831 1 14 HELIX 28 AD1 ASP B 9 ASP B 26 1 18 HELIX 29 AD2 PRO B 38 ARG B 52 1 15 HELIX 30 AD3 SER B 54 SER B 70 1 17 HELIX 31 AD4 GLU B 83 ILE B 88 1 6 HELIX 32 AD5 LEU B 89 ASN B 97 1 9 HELIX 33 AD6 ASN B 104 LEU B 108 5 5 HELIX 34 AD7 PRO B 109 LEU B 125 1 17 HELIX 35 AD8 ASP B 139 CYS B 149 1 11 HELIX 36 AD9 SER B 155 ASN B 168 1 14 HELIX 37 AE1 ASP B 169 ASN B 185 1 17 SHEET 1 AA1 6 SER A 268 LEU A 271 0 SHEET 2 AA1 6 HIS A 277 PHE A 281 -1 O LEU A 278 N SER A 270 SHEET 3 AA1 6 PHE A 328 LEU A 332 -1 O LEU A 330 N ALA A 279 SHEET 4 AA1 6 TRP A 311 ARG A 319 -1 N VAL A 318 O THR A 329 SHEET 5 AA1 6 GLU A 298 TYR A 303 -1 N LEU A 301 O GLY A 313 SHEET 6 AA1 6 PHE A 347 PHE A 351 -1 O THR A 348 N TRP A 302 SHEET 1 AA2 3 ASP A 390 PHE A 393 0 SHEET 2 AA2 3 GLU B 196 THR B 200 1 O THR B 200 N SER A 392 SHEET 3 AA2 3 THR B 187 GLU B 190 -1 N THR B 187 O ARG B 199 SHEET 1 AA3 7 VAL A 479 ARG A 481 0 SHEET 2 AA3 7 VAL A 549 THR A 553 1 O CYS A 551 N VAL A 480 SHEET 3 AA3 7 ILE A 455 ALA A 459 1 N VAL A 457 O VAL A 550 SHEET 4 AA3 7 THR A 568 ILE A 571 1 O LEU A 570 N CYS A 458 SHEET 5 AA3 7 GLN A 592 GLY A 597 1 O VAL A 596 N ILE A 571 SHEET 6 AA3 7 LEU A 425 GLN A 429 1 N SER A 426 O LEU A 595 SHEET 7 AA3 7 ILE A 632 ARG A 633 1 O ILE A 632 N GLN A 429 SHEET 1 AA4 2 VAL A 636 GLN A 637 0 SHEET 2 AA4 2 GLN A 658 ASN A 659 1 O GLN A 658 N GLN A 637 SHEET 1 AA5 7 GLU A 758 ALA A 760 0 SHEET 2 AA5 7 ILE A 726 ILE A 729 1 N VAL A 728 O GLU A 758 SHEET 3 AA5 7 LYS A 770 SER A 776 1 O ILE A 774 N ILE A 729 SHEET 4 AA5 7 ALA A 802 GLY A 810 1 O LEU A 809 N LEU A 775 SHEET 5 AA5 7 MET A 682 ALA A 686 1 N TRP A 685 O ILE A 808 SHEET 6 AA5 7 LEU A 834 THR A 838 1 O VAL A 835 N ALA A 686 SHEET 7 AA5 7 ASN A 841 LEU A 844 -1 O GLN A 843 N GLU A 836 SHEET 1 AA6 2 GLU A 692 ILE A 693 0 SHEET 2 AA6 2 PHE A 700 LEU A 701 -1 O LEU A 701 N GLU A 692 SHEET 1 AA7 5 LEU B 75 ILE B 79 0 SHEET 2 AA7 5 VAL B 31 ILE B 37 1 N PHE B 35 O LYS B 76 SHEET 3 AA7 5 THR B 2 ILE B 8 1 N PHE B 6 O ASN B 34 SHEET 4 AA7 5 TRP B 133 ILE B 136 1 O ILE B 136 N ILE B 7 SHEET 5 AA7 5 SER B 153 CYS B 154 1 O CYS B 154 N LEU B 135 LINK C ASP B 26 N CME B 27 1555 1555 1.33 LINK C CME B 27 N THR B 28 1555 1555 1.35 CRYST1 119.350 131.160 169.550 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008379 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007624 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005898 0.00000