data_8RER # _entry.id 8RER # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.400 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RER pdb_00008rer 10.2210/pdb8rer/pdb WWPDB D_1292135268 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RER _pdbx_database_status.recvd_initial_deposition_date 2023-12-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email james.hall@reading.ac.uk _pdbx_contact_author.name_first James _pdbx_contact_author.name_last Hall _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3716-4378 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Abdullrahman, A.' 1 0000-0002-4745-6852 'Cardin, C.J.' 2 0000-0002-2556-9995 'Hall, J.P.' 3 0000-0003-3716-4378 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Ruthenium Polypyridyl complex intercalating in Major and Minor Groove DNA' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abdullrahman, A.' 1 0000-0002-4745-6852 primary 'McQuaid, K.' 2 0000-0002-3222-5584 primary 'Cardin, C.J.' 3 0000-0002-2556-9995 primary 'Hall, J.P.' 4 0000-0003-3716-4378 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*AP*AP*TP*AP*GP*G)-3') ; 2186.473 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*TP*AP*TP*TP*C)-3') ; 2048.373 2 ? ? ? ? 3 non-polymer syn 'lambda-[Ru(tap2-dppz-CN)]2+' 772.741 4 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 8 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 6 ? ? ? ? 6 water nat water 18.015 207 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DA)(DA)(DT)(DA)(DG)(DG)' GAATAGG A,C ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DA)(DT)(DT)(DC)' CCTATTC B,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'lambda-[Ru(tap2-dppz-CN)]2+' KSB 4 'MAGNESIUM ION' MG 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DA n 1 3 DA n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DG n 2 1 DC n 2 2 DC n 2 3 DT n 2 4 DA n 2 5 DT n 2 6 DT n 2 7 DC n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 7 'synthetic construct' ? 32630 ? 2 1 sample 1 7 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 KSB 'D-beta-peptide, C-gamma linking' . 'lambda-[Ru(tap2-dppz-CN)]2+' 'Cyano-derivative of Ruthenium-dipyridophenazine' 'C39 H21 N13 Ru 6' 772.741 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DA 5 5 5 DA DA A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DA 4 4 4 DA DA B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DT 6 6 6 DT DT B . n B 2 7 DC 7 7 7 DC DC B . n C 1 1 DG 1 1 1 DG DG C . n C 1 2 DA 2 2 2 DA DA C . n C 1 3 DA 3 3 3 DA DA C . n C 1 4 DT 4 4 4 DT DT C . n C 1 5 DA 5 5 5 DA DA C . n C 1 6 DG 6 6 6 DG DG C . n C 1 7 DG 7 7 7 DG DG C . n D 2 1 DC 1 1 1 DC DC D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DT 3 3 3 DT DT D . n D 2 4 DA 4 4 4 DA DA D . n D 2 5 DT 5 5 5 DT DT D . n D 2 6 DT 6 6 6 DT DT D . n D 2 7 DC 7 7 7 DC DC D . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id KSB _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id KSB _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 KSB 1 101 1 KSB KSB A . F 4 MG 1 102 3 MG MG A . G 4 MG 1 103 4 MG MG A . H 5 CL 1 104 1 CL CL A . I 5 CL 1 105 2 CL CL A . J 3 KSB 1 101 2 KSB KSB B . K 4 MG 1 102 2 MG MG B . L 4 MG 1 103 5 MG MG B . M 5 CL 1 104 3 CL CL B . N 5 CL 1 105 5 CL CL B . O 3 KSB 1 101 3 KSB KSB C . P 4 MG 1 102 1 MG MG C . Q 4 MG 1 103 8 MG MG C . R 4 MG 1 104 9 MG MG C . S 5 CL 1 105 4 CL CL C . T 3 KSB 1 101 4 KSB KSB D . U 4 MG 1 102 6 MG MG D . V 5 CL 1 103 6 CL CL D . W 6 HOH 1 201 89 HOH HOH A . W 6 HOH 2 202 140 HOH HOH A . W 6 HOH 3 203 109 HOH HOH A . W 6 HOH 4 204 128 HOH HOH A . W 6 HOH 5 205 115 HOH HOH A . W 6 HOH 6 206 41 HOH HOH A . W 6 HOH 7 207 25 HOH HOH A . W 6 HOH 8 208 85 HOH HOH A . W 6 HOH 9 209 110 HOH HOH A . W 6 HOH 10 210 27 HOH HOH A . W 6 HOH 11 211 134 HOH HOH A . W 6 HOH 12 212 72 HOH HOH A . W 6 HOH 13 213 61 HOH HOH A . W 6 HOH 14 214 133 HOH HOH A . W 6 HOH 15 215 21 HOH HOH A . W 6 HOH 16 216 68 HOH HOH A . W 6 HOH 17 217 182 HOH HOH A . W 6 HOH 18 218 43 HOH HOH A . W 6 HOH 19 219 154 HOH HOH A . W 6 HOH 20 220 30 HOH HOH A . W 6 HOH 21 221 197 HOH HOH A . W 6 HOH 22 222 113 HOH HOH A . W 6 HOH 23 223 209 HOH HOH A . W 6 HOH 24 224 53 HOH HOH A . W 6 HOH 25 225 71 HOH HOH A . W 6 HOH 26 226 84 HOH HOH A . W 6 HOH 27 227 141 HOH HOH A . W 6 HOH 28 228 149 HOH HOH A . W 6 HOH 29 229 57 HOH HOH A . W 6 HOH 30 230 11 HOH HOH A . W 6 HOH 31 231 76 HOH HOH A . W 6 HOH 32 232 78 HOH HOH A . W 6 HOH 33 233 194 HOH HOH A . W 6 HOH 34 234 16 HOH HOH A . W 6 HOH 35 235 35 HOH HOH A . W 6 HOH 36 236 230 HOH HOH A . W 6 HOH 37 237 117 HOH HOH A . W 6 HOH 38 238 31 HOH HOH A . W 6 HOH 39 239 179 HOH HOH A . W 6 HOH 40 240 238 HOH HOH A . W 6 HOH 41 241 118 HOH HOH A . W 6 HOH 42 242 44 HOH HOH A . W 6 HOH 43 243 28 HOH HOH A . X 6 HOH 1 201 47 HOH HOH B . X 6 HOH 2 202 77 HOH HOH B . X 6 HOH 3 203 94 HOH HOH B . X 6 HOH 4 204 180 HOH HOH B . X 6 HOH 5 205 63 HOH HOH B . X 6 HOH 6 206 196 HOH HOH B . X 6 HOH 7 207 120 HOH HOH B . X 6 HOH 8 208 156 HOH HOH B . X 6 HOH 9 209 69 HOH HOH B . X 6 HOH 10 210 116 HOH HOH B . X 6 HOH 11 211 220 HOH HOH B . X 6 HOH 12 212 32 HOH HOH B . X 6 HOH 13 213 7 HOH HOH B . X 6 HOH 14 214 227 HOH HOH B . X 6 HOH 15 215 51 HOH HOH B . X 6 HOH 16 216 38 HOH HOH B . X 6 HOH 17 217 5 HOH HOH B . X 6 HOH 18 218 4 HOH HOH B . X 6 HOH 19 219 93 HOH HOH B . X 6 HOH 20 220 36 HOH HOH B . X 6 HOH 21 221 243 HOH HOH B . X 6 HOH 22 222 107 HOH HOH B . X 6 HOH 23 223 88 HOH HOH B . X 6 HOH 24 224 130 HOH HOH B . X 6 HOH 25 225 237 HOH HOH B . X 6 HOH 26 226 20 HOH HOH B . X 6 HOH 27 227 146 HOH HOH B . X 6 HOH 28 228 97 HOH HOH B . X 6 HOH 29 229 86 HOH HOH B . X 6 HOH 30 230 223 HOH HOH B . X 6 HOH 31 231 52 HOH HOH B . X 6 HOH 32 232 13 HOH HOH B . X 6 HOH 33 233 114 HOH HOH B . X 6 HOH 34 234 105 HOH HOH B . X 6 HOH 35 235 157 HOH HOH B . X 6 HOH 36 236 159 HOH HOH B . X 6 HOH 37 237 15 HOH HOH B . X 6 HOH 38 238 167 HOH HOH B . X 6 HOH 39 239 96 HOH HOH B . X 6 HOH 40 240 17 HOH HOH B . X 6 HOH 41 241 189 HOH HOH B . X 6 HOH 42 242 176 HOH HOH B . X 6 HOH 43 243 163 HOH HOH B . X 6 HOH 44 244 139 HOH HOH B . X 6 HOH 45 245 242 HOH HOH B . X 6 HOH 46 246 99 HOH HOH B . X 6 HOH 47 247 50 HOH HOH B . X 6 HOH 48 248 59 HOH HOH B . X 6 HOH 49 249 201 HOH HOH B . X 6 HOH 50 250 131 HOH HOH B . X 6 HOH 51 251 126 HOH HOH B . X 6 HOH 52 252 212 HOH HOH B . X 6 HOH 53 253 151 HOH HOH B . X 6 HOH 54 254 165 HOH HOH B . X 6 HOH 55 255 83 HOH HOH B . X 6 HOH 56 256 39 HOH HOH B . X 6 HOH 57 257 241 HOH HOH B . X 6 HOH 58 258 224 HOH HOH B . X 6 HOH 59 259 170 HOH HOH B . X 6 HOH 60 260 10 HOH HOH B . Y 6 HOH 1 201 136 HOH HOH C . Y 6 HOH 2 202 9 HOH HOH C . Y 6 HOH 3 203 155 HOH HOH C . Y 6 HOH 4 204 67 HOH HOH C . Y 6 HOH 5 205 66 HOH HOH C . Y 6 HOH 6 206 188 HOH HOH C . Y 6 HOH 7 207 26 HOH HOH C . Y 6 HOH 8 208 46 HOH HOH C . Y 6 HOH 9 209 8 HOH HOH C . Y 6 HOH 10 210 24 HOH HOH C . Y 6 HOH 11 211 127 HOH HOH C . Y 6 HOH 12 212 98 HOH HOH C . Y 6 HOH 13 213 213 HOH HOH C . Y 6 HOH 14 214 56 HOH HOH C . Y 6 HOH 15 215 132 HOH HOH C . Y 6 HOH 16 216 22 HOH HOH C . Y 6 HOH 17 217 142 HOH HOH C . Y 6 HOH 18 218 62 HOH HOH C . Y 6 HOH 19 219 60 HOH HOH C . Y 6 HOH 20 220 33 HOH HOH C . Y 6 HOH 21 221 135 HOH HOH C . Y 6 HOH 22 222 112 HOH HOH C . Y 6 HOH 23 223 152 HOH HOH C . Y 6 HOH 24 224 232 HOH HOH C . Y 6 HOH 25 225 103 HOH HOH C . Y 6 HOH 26 226 225 HOH HOH C . Y 6 HOH 27 227 219 HOH HOH C . Y 6 HOH 28 228 106 HOH HOH C . Y 6 HOH 29 229 190 HOH HOH C . Y 6 HOH 30 230 58 HOH HOH C . Y 6 HOH 31 231 64 HOH HOH C . Y 6 HOH 32 232 14 HOH HOH C . Y 6 HOH 33 233 129 HOH HOH C . Y 6 HOH 34 234 82 HOH HOH C . Y 6 HOH 35 235 233 HOH HOH C . Y 6 HOH 36 236 79 HOH HOH C . Y 6 HOH 37 237 208 HOH HOH C . Y 6 HOH 38 238 80 HOH HOH C . Y 6 HOH 39 239 226 HOH HOH C . Y 6 HOH 40 240 231 HOH HOH C . Y 6 HOH 41 241 183 HOH HOH C . Y 6 HOH 42 242 204 HOH HOH C . Y 6 HOH 43 243 229 HOH HOH C . Y 6 HOH 44 244 29 HOH HOH C . Y 6 HOH 45 245 123 HOH HOH C . Y 6 HOH 46 246 40 HOH HOH C . Y 6 HOH 47 247 234 HOH HOH C . Z 6 HOH 1 201 55 HOH HOH D . Z 6 HOH 2 202 65 HOH HOH D . Z 6 HOH 3 203 95 HOH HOH D . Z 6 HOH 4 204 74 HOH HOH D . Z 6 HOH 5 205 211 HOH HOH D . Z 6 HOH 6 206 174 HOH HOH D . Z 6 HOH 7 207 193 HOH HOH D . Z 6 HOH 8 208 73 HOH HOH D . Z 6 HOH 9 209 169 HOH HOH D . Z 6 HOH 10 210 119 HOH HOH D . Z 6 HOH 11 211 6 HOH HOH D . Z 6 HOH 12 212 199 HOH HOH D . Z 6 HOH 13 213 37 HOH HOH D . Z 6 HOH 14 214 45 HOH HOH D . Z 6 HOH 15 215 186 HOH HOH D . Z 6 HOH 16 216 195 HOH HOH D . Z 6 HOH 17 217 3 HOH HOH D . Z 6 HOH 18 218 34 HOH HOH D . Z 6 HOH 19 219 187 HOH HOH D . Z 6 HOH 20 220 125 HOH HOH D . Z 6 HOH 21 221 92 HOH HOH D . Z 6 HOH 22 222 164 HOH HOH D . Z 6 HOH 23 223 19 HOH HOH D . Z 6 HOH 24 224 162 HOH HOH D . Z 6 HOH 25 225 87 HOH HOH D . Z 6 HOH 26 226 102 HOH HOH D . Z 6 HOH 27 227 81 HOH HOH D . Z 6 HOH 28 228 122 HOH HOH D . Z 6 HOH 29 229 54 HOH HOH D . Z 6 HOH 30 230 200 HOH HOH D . Z 6 HOH 31 231 236 HOH HOH D . Z 6 HOH 32 232 100 HOH HOH D . Z 6 HOH 33 233 218 HOH HOH D . Z 6 HOH 34 234 12 HOH HOH D . Z 6 HOH 35 235 158 HOH HOH D . Z 6 HOH 36 236 70 HOH HOH D . Z 6 HOH 37 237 150 HOH HOH D . Z 6 HOH 38 238 23 HOH HOH D . Z 6 HOH 39 239 145 HOH HOH D . Z 6 HOH 40 240 18 HOH HOH D . Z 6 HOH 41 241 124 HOH HOH D . Z 6 HOH 42 242 148 HOH HOH D . Z 6 HOH 43 243 240 HOH HOH D . Z 6 HOH 44 244 215 HOH HOH D . Z 6 HOH 45 245 153 HOH HOH D . Z 6 HOH 46 246 75 HOH HOH D . Z 6 HOH 47 247 202 HOH HOH D . Z 6 HOH 48 248 48 HOH HOH D . Z 6 HOH 49 249 138 HOH HOH D . Z 6 HOH 50 250 42 HOH HOH D . Z 6 HOH 51 251 216 HOH HOH D . Z 6 HOH 52 252 147 HOH HOH D . Z 6 HOH 53 253 137 HOH HOH D . Z 6 HOH 54 254 235 HOH HOH D . Z 6 HOH 55 255 239 HOH HOH D . Z 6 HOH 56 256 104 HOH HOH D . Z 6 HOH 57 257 143 HOH HOH D . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXDE ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8RER _cell.details ? _cell.formula_units_Z ? _cell.length_a 32.676 _cell.length_a_esd ? _cell.length_b 32.676 _cell.length_b_esd ? _cell.length_c 103.988 _cell.length_c_esd ? _cell.volume 111030.169 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RER _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RER _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 62.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.86 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;A solution containing 0.6 mM DNA, 20 mM Sodium Cacodylate pH 5.5, 100 mM NaCl, 10 mM MgCl2 and 1.6 mM [Ru(TAP)2(11-CN-dppz)] was mixed in a 1:1 ratio with a solution containing 80.6 mM KCl, 40 mM Sodium cacodylate trihydrate pH 5.86, 55% -2-Methyl-2,4-pentanediol, 120 mM Spermine tetrahydrochloride. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 278 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 XE 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-09-27 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97623 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97623 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 15.77 _reflns.entry_id 8RER _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.20 _reflns.d_resolution_low 32.68 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 33977 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 0.828 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.072 _reflns.pdbx_Rpim_I_all 0.020 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 3.26 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1710 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.700 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 26.31 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8RER _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.20 _refine.ls_d_res_low 32.68 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 32448 _refine.ls_number_reflns_R_free 3234 _refine.ls_number_reflns_R_work 60407 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.65 _refine.ls_percent_reflns_R_free 5.08 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1730 _refine.ls_R_factor_R_free 0.2025 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1715 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.9477 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2273 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 32.68 _refine_hist.number_atoms_solvent 207 _refine_hist.number_atoms_total 995 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 562 _refine_hist.pdbx_number_atoms_ligand 226 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0062 ? 958 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.2673 ? 1522 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0426 ? 108 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0035 ? 43 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 30.1066 ? 294 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.ncs_model_details 1 'X-RAY DIFFRACTION' d_2 ens_1 0.089533346448 ? ? ? 'Torsion NCS' A A ? ? ? ? 2 'X-RAY DIFFRACTION' d_2 ens_2 0.0274694903101 ? ? ? 'Torsion NCS' B B ? ? ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.20 1.22 . . 13 490 17.00 . . . . 0.6545 . . . . . . . . . . . 0.4673 'X-RAY DIFFRACTION' 1.22 1.24 . . 189 2434 91.59 . . . . 0.5657 . . . . . . . . . . . 0.5696 'X-RAY DIFFRACTION' 1.24 1.26 . . 145 2496 88.89 . . . . 0.5353 . . . . . . . . . . . 0.5379 'X-RAY DIFFRACTION' 1.26 1.28 . . 120 2708 99.23 . . . . 0.5072 . . . . . . . . . . . 0.5539 'X-RAY DIFFRACTION' 1.28 1.30 . . 180 2731 99.18 . . . . 0.4829 . . . . . . . . . . . 0.4829 'X-RAY DIFFRACTION' 1.30 1.33 . . 116 2786 99.42 . . . . 0.4497 . . . . . . . . . . . 0.5158 'X-RAY DIFFRACTION' 1.33 1.35 . . 136 2819 99.70 . . . . 0.4087 . . . . . . . . . . . 0.4613 'X-RAY DIFFRACTION' 1.35 1.38 . . 152 2708 99.24 . . . . 0.3736 . . . . . . . . . . . 0.4185 'X-RAY DIFFRACTION' 1.38 1.42 . . 93 2857 99.26 . . . . 0.3070 . . . . . . . . . . . 0.3277 'X-RAY DIFFRACTION' 1.42 1.45 . . 158 2710 99.45 . . . . 0.2691 . . . . . . . . . . . 0.3317 'X-RAY DIFFRACTION' 1.45 1.49 . . 165 2832 99.67 . . . . 0.2530 . . . . . . . . . . . 0.2440 'X-RAY DIFFRACTION' 1.49 1.53 . . 158 2654 98.81 . . . . 0.2178 . . . . . . . . . . . 0.2217 'X-RAY DIFFRACTION' 1.53 1.58 . . 176 2711 98.67 . . . . 0.2017 . . . . . . . . . . . 0.2078 'X-RAY DIFFRACTION' 1.58 1.64 . . 168 2703 97.69 . . . . 0.1783 . . . . . . . . . . . 0.1992 'X-RAY DIFFRACTION' 1.64 1.71 . . 102 2748 97.17 . . . . 0.1506 . . . . . . . . . . . 0.1536 'X-RAY DIFFRACTION' 1.71 1.78 . . 185 2681 98.15 . . . . 0.1549 . . . . . . . . . . . 0.1784 'X-RAY DIFFRACTION' 1.78 1.88 . . 143 2725 99.07 . . . . 0.1491 . . . . . . . . . . . 0.1552 'X-RAY DIFFRACTION' 1.88 2.00 . . 133 2761 99.59 . . . . 0.1548 . . . . . . . . . . . 0.2057 'X-RAY DIFFRACTION' 2.00 2.15 . . 120 2830 99.33 . . . . 0.1357 . . . . . . . . . . . 0.1419 'X-RAY DIFFRACTION' 2.15 2.37 . . 134 2767 99.52 . . . . 0.1392 . . . . . . . . . . . 0.1395 'X-RAY DIFFRACTION' 2.37 2.71 . . 156 2779 99.97 . . . . 0.1383 . . . . . . . . . . . 0.1578 'X-RAY DIFFRACTION' 2.71 3.41 . . 155 2694 98.55 . . . . 0.1362 . . . . . . . . . . . 0.1832 'X-RAY DIFFRACTION' 3.41 32.68 . . 137 2783 99.49 . . . . 0.1052 . . . . . . . . . . . 0.1512 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] _struct_ncs_oper.details 1 given -0.999998178393 -0.000623046296423 0.00180416823599 -0.000624976034436 0.999999233072 -0.00106923364807 -0.00180350067025 -0.00107035926226 -0.999997800856 16.3388986035 -16.3278197104 26.1927609427 ? 2 given -0.99999907835 -0.000941983179922 0.000977736000587 -0.000942032803414 0.999999555022 -5.02941783372e-05 -0.000977688189246 -5.12151913692e-05 -0.999999520751 16.324011143 -16.3268421834 26.1884389207 ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details ens_1 d_1 ;chain "A" ; ens_1 d_2 ;chain "C" ; ens_2 d_1 ;chain "B" ; ens_2 d_2 ;chain "D" ; # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details ens_1 d_1 1 A DG 1 . A DG 1 . A DG 1 A DG 1 ? ? ens_1 d_2 1 C DG 1 . C DG 1 . C DG 1 C DG 1 ? ? ens_2 d_1 1 B DC 1 . B DC 1 . B DC 1 B DC 1 ? ? ens_2 d_2 1 D DC 1 . D DC 1 . D DC 1 D DC 1 ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details ens_1 ? ens_2 ? # loop_ _struct_ncs_ens_gen.ens_id _struct_ncs_ens_gen.dom_id_1 _struct_ncs_ens_gen.dom_id_2 _struct_ncs_ens_gen.oper_id ens_1 d_2 d_1 1 ens_2 d_2 d_1 2 # _struct.entry_id 8RER _struct.title 'Major groove intercalation with Polypyridyl Ruthenium complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RER _struct_keywords.text 'DNA, Major Groove, ruthenium, Minor Groove' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 3 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 5 ? T N N 3 ? U N N 4 ? V N N 5 ? W N N 6 ? X N N 6 ? Y N N 6 ? Z N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8RER 8RER ? 1 ? 1 2 PDB 8RER 8RER ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8RER A 1 ? 7 ? 8RER 1 ? 7 ? 1 7 2 2 8RER B 1 ? 7 ? 8RER 1 ? 7 ? 1 7 3 1 8RER C 1 ? 7 ? 8RER 1 ? 7 ? 1 7 4 2 8RER D 1 ? 7 ? 8RER 1 ? 7 ? 1 7 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F,G,H,I,J,K,L,M,N,W,X 2 1 C,D,O,P,Q,R,S,T,U,V,Y,Z # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 4 OP2 ? ? ? 1_555 F MG . MG ? ? A DT 4 A MG 102 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc2 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 102 A HOH 213 1_555 ? ? ? ? ? ? ? 2.401 ? ? metalc3 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 102 A HOH 222 1_555 ? ? ? ? ? ? ? 2.202 ? ? metalc4 metalc ? ? F MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 102 A HOH 226 1_555 ? ? ? ? ? ? ? 2.377 ? ? metalc5 metalc ? ? F MG . MG ? ? ? 1_555 Z HOH . O ? ? A MG 102 D HOH 210 1_565 ? ? ? ? ? ? ? 2.223 ? ? metalc6 metalc ? ? F MG . MG ? ? ? 1_555 Z HOH . O ? ? A MG 102 D HOH 217 1_565 ? ? ? ? ? ? ? 2.052 ? ? metalc7 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 103 A HOH 204 1_555 ? ? ? ? ? ? ? 2.037 ? ? metalc8 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 103 A HOH 205 1_555 ? ? ? ? ? ? ? 2.254 ? ? metalc9 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 103 A HOH 237 1_555 ? ? ? ? ? ? ? 2.139 ? ? metalc10 metalc ? ? G MG . MG ? ? ? 1_555 W HOH . O ? ? A MG 103 A HOH 241 1_555 ? ? ? ? ? ? ? 2.268 ? ? metalc11 metalc ? ? G MG . MG ? ? ? 3_545 D DC 2 OP1 ? ? A MG 103 D DC 2 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc12 metalc ? ? G MG . MG ? ? ? 1_555 Z HOH . O ? ? A MG 103 D HOH 201 4_654 ? ? ? ? ? ? ? 2.522 ? ? metalc13 metalc ? ? W HOH . O ? ? ? 1_555 R MG . MG ? ? A HOH 210 C MG 104 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc14 metalc ? ? W HOH . O ? ? ? 4_554 P MG . MG ? ? A HOH 218 C MG 102 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc15 metalc ? ? W HOH . O ? ? ? 4_554 P MG . MG ? ? A HOH 230 C MG 102 1_555 ? ? ? ? ? ? ? 2.051 ? ? metalc16 metalc ? ? W HOH . O ? ? ? 4_554 P MG . MG ? ? A HOH 242 C MG 102 1_555 ? ? ? ? ? ? ? 2.120 ? ? metalc17 metalc ? ? W HOH . O ? ? ? 4_554 P MG . MG ? ? A HOH 243 C MG 102 1_555 ? ? ? ? ? ? ? 2.075 ? ? metalc18 metalc ? ? B DC 2 OP1 ? ? ? 1_555 L MG . MG ? ? B DC 2 B MG 103 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc19 metalc ? ? K MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 102 B HOH 202 1_555 ? ? ? ? ? ? ? 2.833 ? ? metalc20 metalc ? ? K MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 102 B HOH 215 1_555 ? ? ? ? ? ? ? 2.373 ? ? metalc21 metalc ? ? K MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 102 B HOH 240 1_555 ? ? ? ? ? ? ? 2.014 ? ? metalc22 metalc ? ? K MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 102 B HOH 253 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc23 metalc ? ? K MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 102 B HOH 256 1_555 ? ? ? ? ? ? ? 2.515 ? ? metalc24 metalc ? ? L MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 103 B HOH 201 1_555 ? ? ? ? ? ? ? 2.610 ? ? metalc25 metalc ? ? L MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 103 B HOH 207 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc26 metalc ? ? L MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 103 B HOH 224 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc27 metalc ? ? L MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 103 B HOH 233 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc28 metalc ? ? L MG . MG ? ? ? 1_555 X HOH . O ? ? B MG 103 B HOH 248 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc29 metalc ? ? X HOH . O ? ? ? 1_555 Q MG . MG ? ? B HOH 210 C MG 103 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc30 metalc ? ? X HOH . O ? ? ? 4_554 P MG . MG ? ? B HOH 217 C MG 102 1_555 ? ? ? ? ? ? ? 2.302 ? ? metalc31 metalc ? ? X HOH . O ? ? ? 1_555 Q MG . MG ? ? B HOH 218 C MG 103 1_555 ? ? ? ? ? ? ? 2.040 ? ? metalc32 metalc ? ? X HOH . O ? ? ? 4_554 P MG . MG ? ? B HOH 260 C MG 102 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc33 metalc ? ? C DT 4 OP2 ? ? ? 1_555 Q MG . MG ? ? C DT 4 C MG 103 1_555 ? ? ? ? ? ? ? 2.101 ? ? metalc34 metalc ? ? Q MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 103 C HOH 205 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc35 metalc ? ? Q MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 103 C HOH 212 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc36 metalc ? ? Q MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 103 C HOH 227 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc37 metalc ? ? R MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 104 C HOH 203 1_555 ? ? ? ? ? ? ? 2.431 ? ? metalc38 metalc ? ? R MG . MG ? ? ? 1_555 Y HOH . O ? ? C MG 104 C HOH 239 1_555 ? ? ? ? ? ? ? 2.623 ? ? metalc39 metalc ? ? U MG . MG ? ? ? 1_555 Z HOH . O ? ? D MG 102 D HOH 214 1_555 ? ? ? ? ? ? ? 2.273 ? ? metalc40 metalc ? ? U MG . MG ? ? ? 1_555 Z HOH . O ? ? D MG 102 D HOH 238 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc41 metalc ? ? U MG . MG ? ? ? 1_555 Z HOH . O ? ? D MG 102 D HOH 250 1_555 ? ? ? ? ? ? ? 2.628 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 1 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 1 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 1 B DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DA 2 N1 ? ? ? 1_555 B DT 6 N3 ? ? A DA 2 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DA 2 N6 ? ? ? 1_555 B DT 6 O4 ? ? A DA 2 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 3 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 3 B DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 4 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 4 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 5 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 5 B DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 6 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 7 N3 ? ? C DG 1 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 7 O2 ? ? C DG 1 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 7 N4 ? ? C DG 1 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DA 2 N1 ? ? ? 1_555 D DT 6 N3 ? ? C DA 2 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 2 N6 ? ? ? 1_555 D DT 6 O4 ? ? C DA 2 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 3 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 3 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DA 3 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 3 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 4 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 5 N1 ? ? ? 1_555 D DT 3 N3 ? ? C DA 5 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 5 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 5 D DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 1 N3 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 1 O2 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 1 N4 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A DT 4 ? A DT 4 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 213 ? 1_555 93.2 ? 2 OP2 ? A DT 4 ? A DT 4 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 222 ? 1_555 93.7 ? 3 O ? W HOH . ? A HOH 213 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 222 ? 1_555 86.7 ? 4 OP2 ? A DT 4 ? A DT 4 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 226 ? 1_555 99.8 ? 5 O ? W HOH . ? A HOH 213 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 226 ? 1_555 165.6 ? 6 O ? W HOH . ? A HOH 222 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? W HOH . ? A HOH 226 ? 1_555 98.5 ? 7 OP2 ? A DT 4 ? A DT 4 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 210 ? 1_565 179.3 ? 8 O ? W HOH . ? A HOH 213 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 210 ? 1_565 86.1 ? 9 O ? W HOH . ? A HOH 222 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 210 ? 1_565 86.3 ? 10 O ? W HOH . ? A HOH 226 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 210 ? 1_565 80.8 ? 11 OP2 ? A DT 4 ? A DT 4 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 217 ? 1_565 98.4 ? 12 O ? W HOH . ? A HOH 213 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 217 ? 1_565 87.4 ? 13 O ? W HOH . ? A HOH 222 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 217 ? 1_565 166.8 ? 14 O ? W HOH . ? A HOH 226 ? 1_555 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 217 ? 1_565 84.6 ? 15 O ? Z HOH . ? D HOH 210 ? 1_565 MG ? F MG . ? A MG 102 ? 1_555 O ? Z HOH . ? D HOH 217 ? 1_565 81.6 ? 16 O ? W HOH . ? A HOH 204 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 205 ? 1_555 95.1 ? 17 O ? W HOH . ? A HOH 204 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 237 ? 1_555 96.2 ? 18 O ? W HOH . ? A HOH 205 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 237 ? 1_555 86.1 ? 19 O ? W HOH . ? A HOH 204 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 241 ? 1_555 91.6 ? 20 O ? W HOH . ? A HOH 205 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 241 ? 1_555 173.3 ? 21 O ? W HOH . ? A HOH 237 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? W HOH . ? A HOH 241 ? 1_555 92.1 ? 22 O ? W HOH . ? A HOH 204 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 OP1 ? D DC 2 ? D DC 2 ? 1_555 129.6 ? 23 O ? W HOH . ? A HOH 205 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 OP1 ? D DC 2 ? D DC 2 ? 1_555 38.0 ? 24 O ? W HOH . ? A HOH 237 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 OP1 ? D DC 2 ? D DC 2 ? 1_555 69.9 ? 25 O ? W HOH . ? A HOH 241 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 OP1 ? D DC 2 ? D DC 2 ? 1_555 135.4 ? 26 O ? W HOH . ? A HOH 204 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? Z HOH . ? D HOH 201 ? 4_654 175.8 ? 27 O ? W HOH . ? A HOH 205 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? Z HOH . ? D HOH 201 ? 4_654 81.0 ? 28 O ? W HOH . ? A HOH 237 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? Z HOH . ? D HOH 201 ? 4_654 82.0 ? 29 O ? W HOH . ? A HOH 241 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? Z HOH . ? D HOH 201 ? 4_654 92.3 ? 30 OP1 ? D DC 2 ? D DC 2 ? 1_555 MG ? G MG . ? A MG 103 ? 1_555 O ? Z HOH . ? D HOH 201 ? 4_654 46.2 ? 31 O ? W HOH . ? A HOH 210 ? 1_555 MG ? R MG . ? C MG 104 ? 1_555 O ? Y HOH . ? C HOH 203 ? 1_555 143.3 ? 32 O ? W HOH . ? A HOH 210 ? 1_555 MG ? R MG . ? C MG 104 ? 1_555 O ? Y HOH . ? C HOH 239 ? 1_555 105.0 ? 33 O ? Y HOH . ? C HOH 203 ? 1_555 MG ? R MG . ? C MG 104 ? 1_555 O ? Y HOH . ? C HOH 239 ? 1_555 106.4 ? 34 O ? W HOH . ? A HOH 218 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 230 ? 4_554 87.9 ? 35 O ? W HOH . ? A HOH 218 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 242 ? 4_554 169.2 ? 36 O ? W HOH . ? A HOH 230 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 242 ? 4_554 91.1 ? 37 O ? W HOH . ? A HOH 218 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 243 ? 4_554 92.9 ? 38 O ? W HOH . ? A HOH 230 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 243 ? 4_554 91.7 ? 39 O ? W HOH . ? A HOH 242 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? W HOH . ? A HOH 243 ? 4_554 97.8 ? 40 O ? W HOH . ? A HOH 218 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 217 ? 4_554 89.8 ? 41 O ? W HOH . ? A HOH 230 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 217 ? 4_554 87.9 ? 42 O ? W HOH . ? A HOH 242 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 217 ? 4_554 79.4 ? 43 O ? W HOH . ? A HOH 243 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 217 ? 4_554 177.2 ? 44 O ? W HOH . ? A HOH 218 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 260 ? 4_554 94.2 ? 45 O ? W HOH . ? A HOH 230 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 260 ? 4_554 176.3 ? 46 O ? W HOH . ? A HOH 242 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 260 ? 4_554 86.2 ? 47 O ? W HOH . ? A HOH 243 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 260 ? 4_554 91.2 ? 48 O ? X HOH . ? B HOH 217 ? 4_554 MG ? P MG . ? C MG 102 ? 1_555 O ? X HOH . ? B HOH 260 ? 4_554 89.2 ? 49 OP1 ? B DC 2 ? B DC 2 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 201 ? 1_555 87.9 ? 50 OP1 ? B DC 2 ? B DC 2 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 207 ? 1_555 76.6 ? 51 O ? X HOH . ? B HOH 201 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 207 ? 1_555 79.8 ? 52 OP1 ? B DC 2 ? B DC 2 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 224 ? 1_555 92.3 ? 53 O ? X HOH . ? B HOH 201 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 224 ? 1_555 177.8 ? 54 O ? X HOH . ? B HOH 207 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 224 ? 1_555 98.1 ? 55 OP1 ? B DC 2 ? B DC 2 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 233 ? 1_555 102.1 ? 56 O ? X HOH . ? B HOH 201 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 233 ? 1_555 80.9 ? 57 O ? X HOH . ? B HOH 207 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 233 ? 1_555 160.7 ? 58 O ? X HOH . ? B HOH 224 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 233 ? 1_555 101.2 ? 59 OP1 ? B DC 2 ? B DC 2 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 248 ? 1_555 160.9 ? 60 O ? X HOH . ? B HOH 201 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 248 ? 1_555 75.1 ? 61 O ? X HOH . ? B HOH 207 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 248 ? 1_555 91.7 ? 62 O ? X HOH . ? B HOH 224 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 248 ? 1_555 104.4 ? 63 O ? X HOH . ? B HOH 233 ? 1_555 MG ? L MG . ? B MG 103 ? 1_555 O ? X HOH . ? B HOH 248 ? 1_555 83.9 ? 64 O ? X HOH . ? B HOH 202 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 215 ? 1_555 95.2 ? 65 O ? X HOH . ? B HOH 202 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 240 ? 1_555 100.1 ? 66 O ? X HOH . ? B HOH 215 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 240 ? 1_555 91.0 ? 67 O ? X HOH . ? B HOH 202 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 253 ? 1_555 84.9 ? 68 O ? X HOH . ? B HOH 215 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 253 ? 1_555 82.9 ? 69 O ? X HOH . ? B HOH 240 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 253 ? 1_555 172.4 ? 70 O ? X HOH . ? B HOH 202 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 256 ? 1_555 92.8 ? 71 O ? X HOH . ? B HOH 215 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 256 ? 1_555 170.5 ? 72 O ? X HOH . ? B HOH 240 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 256 ? 1_555 82.5 ? 73 O ? X HOH . ? B HOH 253 ? 1_555 MG ? K MG . ? B MG 102 ? 1_555 O ? X HOH . ? B HOH 256 ? 1_555 103.1 ? 74 O ? X HOH . ? B HOH 210 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? X HOH . ? B HOH 218 ? 1_555 87.2 ? 75 O ? X HOH . ? B HOH 210 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 OP2 ? C DT 4 ? C DT 4 ? 1_555 170.1 ? 76 O ? X HOH . ? B HOH 218 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 OP2 ? C DT 4 ? C DT 4 ? 1_555 99.1 ? 77 O ? X HOH . ? B HOH 210 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 205 ? 1_555 88.0 ? 78 O ? X HOH . ? B HOH 218 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 205 ? 1_555 87.9 ? 79 OP2 ? C DT 4 ? C DT 4 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 205 ? 1_555 99.8 ? 80 O ? X HOH . ? B HOH 210 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 212 ? 1_555 82.8 ? 81 O ? X HOH . ? B HOH 218 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 212 ? 1_555 94.2 ? 82 OP2 ? C DT 4 ? C DT 4 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 212 ? 1_555 89.1 ? 83 O ? Y HOH . ? C HOH 205 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 212 ? 1_555 170.4 ? 84 O ? X HOH . ? B HOH 210 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 227 ? 1_555 75.7 ? 85 O ? X HOH . ? B HOH 218 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 227 ? 1_555 162.9 ? 86 OP2 ? C DT 4 ? C DT 4 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 227 ? 1_555 97.8 ? 87 O ? Y HOH . ? C HOH 205 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 227 ? 1_555 91.6 ? 88 O ? Y HOH . ? C HOH 212 ? 1_555 MG ? Q MG . ? C MG 103 ? 1_555 O ? Y HOH . ? C HOH 227 ? 1_555 83.6 ? 89 O ? Z HOH . ? D HOH 214 ? 1_555 MG ? U MG . ? D MG 102 ? 1_555 O ? Z HOH . ? D HOH 238 ? 1_555 91.2 ? 90 O ? Z HOH . ? D HOH 214 ? 1_555 MG ? U MG . ? D MG 102 ? 1_555 O ? Z HOH . ? D HOH 250 ? 1_555 168.4 ? 91 O ? Z HOH . ? D HOH 238 ? 1_555 MG ? U MG . ? D MG 102 ? 1_555 O ? Z HOH . ? D HOH 250 ? 1_555 81.5 ? # _pdbx_entry_details.entry_id 8RER _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 245 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 D _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 231 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_665 _pdbx_validate_symm_contact.dist 2.05 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 1 ? ? "C1'" B DC 1 ? ? N1 B DC 1 ? ? 110.27 108.30 1.97 0.30 N 2 1 "O4'" D DC 1 ? ? "C1'" D DC 1 ? ? N1 D DC 1 ? ? 110.32 108.30 2.02 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x,z+1/4 3 y,-x,z+3/4 4 -x,-y,z+1/2 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id D _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 257 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance . _pdbx_distant_solvent_atoms.neighbor_ligand_distance 6.59 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CL CL CL N N 1 DA OP3 O N N 2 DA P P N N 3 DA OP1 O N N 4 DA OP2 O N N 5 DA "O5'" O N N 6 DA "C5'" C N N 7 DA "C4'" C N R 8 DA "O4'" O N N 9 DA "C3'" C N S 10 DA "O3'" O N N 11 DA "C2'" C N N 12 DA "C1'" C N R 13 DA N9 N Y N 14 DA C8 C Y N 15 DA N7 N Y N 16 DA C5 C Y N 17 DA C6 C Y N 18 DA N6 N N N 19 DA N1 N Y N 20 DA C2 C Y N 21 DA N3 N Y N 22 DA C4 C Y N 23 DA HOP3 H N N 24 DA HOP2 H N N 25 DA "H5'" H N N 26 DA "H5''" H N N 27 DA "H4'" H N N 28 DA "H3'" H N N 29 DA "HO3'" H N N 30 DA "H2'" H N N 31 DA "H2''" H N N 32 DA "H1'" H N N 33 DA H8 H N N 34 DA H61 H N N 35 DA H62 H N N 36 DA H2 H N N 37 DC OP3 O N N 38 DC P P N N 39 DC OP1 O N N 40 DC OP2 O N N 41 DC "O5'" O N N 42 DC "C5'" C N N 43 DC "C4'" C N R 44 DC "O4'" O N N 45 DC "C3'" C N S 46 DC "O3'" O N N 47 DC "C2'" C N N 48 DC "C1'" C N R 49 DC N1 N N N 50 DC C2 C N N 51 DC O2 O N N 52 DC N3 N N N 53 DC C4 C N N 54 DC N4 N N N 55 DC C5 C N N 56 DC C6 C N N 57 DC HOP3 H N N 58 DC HOP2 H N N 59 DC "H5'" H N N 60 DC "H5''" H N N 61 DC "H4'" H N N 62 DC "H3'" H N N 63 DC "HO3'" H N N 64 DC "H2'" H N N 65 DC "H2''" H N N 66 DC "H1'" H N N 67 DC H41 H N N 68 DC H42 H N N 69 DC H5 H N N 70 DC H6 H N N 71 DG OP3 O N N 72 DG P P N N 73 DG OP1 O N N 74 DG OP2 O N N 75 DG "O5'" O N N 76 DG "C5'" C N N 77 DG "C4'" C N R 78 DG "O4'" O N N 79 DG "C3'" C N S 80 DG "O3'" O N N 81 DG "C2'" C N N 82 DG "C1'" C N R 83 DG N9 N Y N 84 DG C8 C Y N 85 DG N7 N Y N 86 DG C5 C Y N 87 DG C6 C N N 88 DG O6 O N N 89 DG N1 N N N 90 DG C2 C N N 91 DG N2 N N N 92 DG N3 N N N 93 DG C4 C Y N 94 DG HOP3 H N N 95 DG HOP2 H N N 96 DG "H5'" H N N 97 DG "H5''" H N N 98 DG "H4'" H N N 99 DG "H3'" H N N 100 DG "HO3'" H N N 101 DG "H2'" H N N 102 DG "H2''" H N N 103 DG "H1'" H N N 104 DG H8 H N N 105 DG H1 H N N 106 DG H21 H N N 107 DG H22 H N N 108 DT OP3 O N N 109 DT P P N N 110 DT OP1 O N N 111 DT OP2 O N N 112 DT "O5'" O N N 113 DT "C5'" C N N 114 DT "C4'" C N R 115 DT "O4'" O N N 116 DT "C3'" C N S 117 DT "O3'" O N N 118 DT "C2'" C N N 119 DT "C1'" C N R 120 DT N1 N N N 121 DT C2 C N N 122 DT O2 O N N 123 DT N3 N N N 124 DT C4 C N N 125 DT O4 O N N 126 DT C5 C N N 127 DT C7 C N N 128 DT C6 C N N 129 DT HOP3 H N N 130 DT HOP2 H N N 131 DT "H5'" H N N 132 DT "H5''" H N N 133 DT "H4'" H N N 134 DT "H3'" H N N 135 DT "HO3'" H N N 136 DT "H2'" H N N 137 DT "H2''" H N N 138 DT "H1'" H N N 139 DT H3 H N N 140 DT H71 H N N 141 DT H72 H N N 142 DT H73 H N N 143 DT H6 H N N 144 HOH O O N N 145 HOH H1 H N N 146 HOH H2 H N N 147 KSB C1 C Y N 148 KSB C10 C Y N 149 KSB C11 C Y N 150 KSB C12 C Y N 151 KSB C13 C Y N 152 KSB C14 C Y N 153 KSB C15 C Y N 154 KSB C16 C Y N 155 KSB C17 C Y N 156 KSB C18 C Y N 157 KSB C19 C Y N 158 KSB C2 C Y N 159 KSB C20 C Y N 160 KSB C21 C Y N 161 KSB C22 C Y N 162 KSB C23 C Y N 163 KSB C24 C Y N 164 KSB C25 C Y N 165 KSB C26 C Y N 166 KSB C27 C Y N 167 KSB C28 C Y N 168 KSB C29 C Y N 169 KSB C3 C Y N 170 KSB C30 C Y N 171 KSB C31 C Y N 172 KSB C32 C Y N 173 KSB C33 C Y N 174 KSB C34 C Y N 175 KSB C35 C Y N 176 KSB C36 C Y N 177 KSB C37 C Y N 178 KSB C38 C Y N 179 KSB C39 C N N 180 KSB C4 C Y N 181 KSB C5 C Y N 182 KSB C6 C Y N 183 KSB C7 C Y N 184 KSB C8 C Y N 185 KSB C9 C Y N 186 KSB N1 N Y N 187 KSB N10 N Y N 188 KSB N11 N Y N 189 KSB N12 N Y N 190 KSB N2 N Y N 191 KSB N3 N Y N 192 KSB N4 N Y N 193 KSB N5 N Y N 194 KSB N6 N Y N 195 KSB N7 N Y N 196 KSB N74 N N N 197 KSB N8 N Y N 198 KSB N9 N Y N 199 KSB RU RU N N 200 KSB H1 H N N 201 KSB H2 H N N 202 KSB H3 H N N 203 KSB H4 H N N 204 KSB H5 H N N 205 KSB H6 H N N 206 KSB H7 H N N 207 KSB H8 H N N 208 KSB H9 H N N 209 KSB H10 H N N 210 KSB H11 H N N 211 KSB H12 H N N 212 KSB H13 H N N 213 KSB H14 H N N 214 KSB H15 H N N 215 KSB H16 H N N 216 KSB H17 H N N 217 KSB H18 H N N 218 KSB H19 H N N 219 KSB H20 H N N 220 KSB H21 H N N 221 MG MG MG N N 222 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 KSB N11 C35 doub Y N 152 KSB N11 C37 sing Y N 153 KSB C34 C35 sing Y N 154 KSB C34 C33 doub Y N 155 KSB C35 C36 sing Y N 156 KSB C37 C38 doub Y N 157 KSB C33 C32 sing Y N 158 KSB C36 C29 sing Y N 159 KSB C36 N12 doub Y N 160 KSB C38 N12 sing Y N 161 KSB C32 C29 doub Y N 162 KSB C32 N10 sing Y N 163 KSB N7 C27 doub Y N 164 KSB N7 C25 sing Y N 165 KSB C27 C28 sing Y N 166 KSB C29 N9 sing Y N 167 KSB N12 RU sing N N 168 KSB C25 C24 doub Y N 169 KSB C25 C26 sing Y N 170 KSB C24 C23 sing Y N 171 KSB N10 C31 doub Y N 172 KSB C28 N8 doub Y N 173 KSB C26 N8 sing Y N 174 KSB C26 C19 doub Y N 175 KSB C23 C22 doub Y N 176 KSB N8 RU sing N N 177 KSB N9 RU sing N N 178 KSB N9 C30 doub Y N 179 KSB C19 C22 sing Y N 180 KSB C19 N5 sing Y N 181 KSB C22 N6 sing Y N 182 KSB C31 C30 sing Y N 183 KSB RU N5 sing N N 184 KSB RU N2 sing N N 185 KSB RU N1 sing N N 186 KSB N5 C20 doub Y N 187 KSB N6 C21 doub Y N 188 KSB C2 N2 doub Y N 189 KSB C2 C3 sing Y N 190 KSB C20 C21 sing Y N 191 KSB N2 C1 sing Y N 192 KSB C3 C4 doub Y N 193 KSB N1 C12 doub Y N 194 KSB N1 C10 sing Y N 195 KSB C12 C11 sing Y N 196 KSB C1 C10 doub Y N 197 KSB C1 C5 sing Y N 198 KSB C4 C5 sing Y N 199 KSB C10 C8 sing Y N 200 KSB C5 C6 doub Y N 201 KSB C11 C9 doub Y N 202 KSB C8 C9 sing Y N 203 KSB C8 C7 doub Y N 204 KSB C6 C7 sing Y N 205 KSB C6 N3 sing Y N 206 KSB C7 N4 sing Y N 207 KSB N3 C15 doub Y N 208 KSB N4 C13 doub Y N 209 KSB C15 C13 sing Y N 210 KSB C15 C16 sing Y N 211 KSB C13 C14 sing Y N 212 KSB C16 C17 doub Y N 213 KSB C14 C18 doub Y N 214 KSB C17 C18 sing Y N 215 KSB C17 C39 sing N N 216 KSB C39 N74 trip N N 217 KSB C11 H1 sing N N 218 KSB C12 H2 sing N N 219 KSB C14 H3 sing N N 220 KSB C16 H4 sing N N 221 KSB C18 H5 sing N N 222 KSB C2 H6 sing N N 223 KSB C20 H7 sing N N 224 KSB C21 H8 sing N N 225 KSB C23 H9 sing N N 226 KSB C24 H10 sing N N 227 KSB C27 H11 sing N N 228 KSB C28 H12 sing N N 229 KSB C3 H13 sing N N 230 KSB C30 H14 sing N N 231 KSB C31 H15 sing N N 232 KSB C33 H16 sing N N 233 KSB C34 H17 sing N N 234 KSB C37 H18 sing N N 235 KSB C38 H19 sing N N 236 KSB C4 H20 sing N N 237 KSB C9 H21 sing N N 238 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8RER 'double helix' 8RER 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 7 1_555 -0.220 -0.138 -0.083 -1.885 -4.575 0.202 1 A_DG1:DC7_B A 1 ? B 7 ? 19 1 1 A DA 2 1_555 B DT 6 1_555 0.092 -0.186 0.162 10.129 -10.121 4.100 2 A_DA2:DT6_B A 2 ? B 6 ? 20 1 1 A DA 3 1_555 B DT 5 1_555 -0.125 -0.204 0.213 -6.141 12.176 6.604 3 A_DA3:DT5_B A 3 ? B 5 ? 20 1 1 A DT 4 1_555 B DA 4 1_555 -0.085 -0.169 0.224 13.163 5.831 3.806 4 A_DT4:DA4_B A 4 ? B 4 ? 20 1 1 A DA 5 1_555 B DT 3 1_555 0.172 -0.152 -0.209 -19.496 3.842 3.130 5 A_DA5:DT3_B A 5 ? B 3 ? 20 1 1 A DG 6 1_555 B DC 1 1_555 -0.307 -0.148 0.374 16.566 -4.426 -1.719 6 A_DG6:DC1_B A 6 ? B 1 ? 19 1 1 C DG 1 1_555 D DC 7 1_555 -0.186 -0.124 -0.104 -2.473 -4.268 0.461 7 C_DG1:DC7_D C 1 ? D 7 ? 19 1 1 C DA 2 1_555 D DT 6 1_555 0.073 -0.158 0.129 9.953 -8.858 4.459 8 C_DA2:DT6_D C 2 ? D 6 ? 20 1 1 C DA 3 1_555 D DT 5 1_555 -0.144 -0.121 0.194 -6.803 13.462 5.638 9 C_DA3:DT5_D C 3 ? D 5 ? 20 1 1 C DT 4 1_555 D DA 4 1_555 -0.085 -0.163 0.210 13.057 6.359 3.742 10 C_DT4:DA4_D C 4 ? D 4 ? 20 1 1 C DA 5 1_555 D DT 3 1_555 0.167 -0.113 -0.206 -19.410 3.367 3.272 11 C_DA5:DT3_D C 5 ? D 3 ? 20 1 1 C DG 6 1_555 D DC 1 1_555 -0.297 -0.163 0.349 16.263 -4.147 -2.005 12 C_DG6:DC1_D C 6 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 7 1_555 A DA 2 1_555 B DT 6 1_555 0.511 -0.128 2.965 -1.960 1.747 33.174 -0.486 -1.186 2.921 3.053 3.427 33.275 1 AA_DG1DA2:DT6DC7_BB A 1 ? B 7 ? A 2 ? B 6 ? 1 A DA 2 1_555 B DT 6 1_555 A DA 3 1_555 B DT 5 1_555 -0.652 0.606 6.739 -9.370 7.218 17.585 -4.804 -6.601 6.100 20.823 27.032 21.167 2 AA_DA2DA3:DT5DT6_BB A 2 ? B 6 ? A 3 ? B 5 ? 1 A DA 3 1_555 B DT 5 1_555 A DT 4 1_555 B DA 4 1_555 -0.105 -0.591 2.969 -0.444 -0.632 20.617 -1.397 0.116 2.987 -1.766 1.240 20.631 3 AA_DA3DT4:DA4DT5_BB A 3 ? B 5 ? A 4 ? B 4 ? 1 A DT 4 1_555 B DA 4 1_555 A DA 5 1_555 B DT 3 1_555 0.500 0.320 7.133 4.399 -9.479 40.615 2.607 0.302 6.907 -13.389 -6.214 41.883 4 AA_DT4DA5:DT3DA4_BB A 4 ? B 4 ? A 5 ? B 3 ? 1 A DA 5 1_555 B DT 3 1_555 A DG 6 1_555 B DC 1 1_555 0.578 1.930 2.727 -7.496 3.525 47.712 2.125 -1.194 2.739 4.320 9.186 48.385 5 AA_DA5DG6:DC1DT3_BB A 5 ? B 3 ? A 6 ? B 1 ? 1 C DG 1 1_555 D DC 7 1_555 C DA 2 1_555 D DT 6 1_555 0.494 -0.107 2.980 -2.066 1.818 32.766 -0.470 -1.193 2.934 3.216 3.655 32.878 6 CC_DG1DA2:DT6DC7_DD C 1 ? D 7 ? C 2 ? D 6 ? 1 C DA 2 1_555 D DT 6 1_555 C DA 3 1_555 D DT 5 1_555 -0.752 0.631 6.732 -9.709 7.356 17.399 -4.866 -6.642 6.090 21.257 28.059 21.212 7 CC_DA2DA3:DT5DT6_DD C 2 ? D 6 ? C 3 ? D 5 ? 1 C DA 3 1_555 D DT 5 1_555 C DT 4 1_555 D DA 4 1_555 -0.099 -0.651 2.962 -0.492 -1.246 20.790 -1.312 0.081 2.997 -3.449 1.363 20.832 8 CC_DA3DT4:DA4DT5_DD C 3 ? D 5 ? C 4 ? D 4 ? 1 C DT 4 1_555 D DA 4 1_555 C DA 5 1_555 D DT 3 1_555 0.472 0.324 7.121 4.597 -9.112 40.599 2.535 0.389 6.905 -12.888 -6.502 41.809 9 CC_DT4DA5:DT3DA4_DD C 4 ? D 4 ? C 5 ? D 3 ? 1 C DA 5 1_555 D DT 3 1_555 C DG 6 1_555 D DC 1 1_555 0.568 1.957 2.747 -7.417 3.057 47.900 2.182 -1.175 2.748 3.734 9.061 48.528 10 CC_DA5DG6:DC1DT3_DD C 5 ? D 3 ? C 6 ? D 1 ? # _pdbx_audit_support.funding_organization 'H2020 Marie Curie Actions of the European Commission' _pdbx_audit_support.country 'European Union' _pdbx_audit_support.grant_number H2020-MSCA-INT-2019-861 _pdbx_audit_support.ordinal 1 # _space_group.name_H-M_alt 'P 41' _space_group.name_Hall 'P 4w' _space_group.IT_number 76 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 8RER _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.030604 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.030604 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009616 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? RU ? ? 32.58156 11.24203 ? ? 1.48681 24.07606 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #