data_8RIS # _entry.id 8RIS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.400 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RIS pdb_00008ris 10.2210/pdb8ris/pdb WWPDB D_1292134757 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RIS _pdbx_database_status.recvd_initial_deposition_date 2023-12-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 4 _pdbx_contact_author.email gustav.oberdorfer@tugraz.at _pdbx_contact_author.name_first Gustav _pdbx_contact_author.name_last Oberdorfer _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-6144-9114 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Oberdorfer, G.' 1 0000-0002-6144-9114 'Moser, M.' 2 0009-0007-0097-1834 'Stoll, D.' 3 0009-0007-9431-915X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Computationally redesigend variant of Pyrrolysyl-tRNA Synthetase (Y306A)' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Oberdorfer, G.' 1 0000-0002-6144-9114 primary 'Moser, M.' 2 0009-0007-0097-1834 primary 'Stoll, D.' 3 0009-0007-9431-915X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Pyrrolysine--tRNA ligase' 31074.615 1 6.1.1.26 ? ? ? 2 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 1 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 6 water nat water 18.015 65 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pyrrolysine--tRNA(Pyl) ligase,Pyrrolysyl-tRNA synthetase,PylRS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKS PILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM LNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGL ERLLKVKHDFKNIKRAARSESYYNGISTNL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHPALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKS PILIPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLANYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTM LNFCQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGL ERLLKVKHDFKNIKRAARSESYYNGISTNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PENTAETHYLENE GLYCOL' 1PE 3 'SODIUM ION' NA 4 GLYCEROL GOL 5 1,2-ETHANEDIOL EDO 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 PRO n 1 5 ALA n 1 6 LEU n 1 7 THR n 1 8 LYS n 1 9 SER n 1 10 GLN n 1 11 THR n 1 12 ASP n 1 13 ARG n 1 14 LEU n 1 15 GLU n 1 16 VAL n 1 17 LEU n 1 18 LEU n 1 19 ASN n 1 20 PRO n 1 21 LYS n 1 22 ASP n 1 23 GLU n 1 24 ILE n 1 25 SER n 1 26 LEU n 1 27 ASN n 1 28 SER n 1 29 GLY n 1 30 LYS n 1 31 PRO n 1 32 PHE n 1 33 ARG n 1 34 GLU n 1 35 LEU n 1 36 GLU n 1 37 SER n 1 38 GLU n 1 39 LEU n 1 40 LEU n 1 41 SER n 1 42 ARG n 1 43 ARG n 1 44 LYS n 1 45 LYS n 1 46 ASP n 1 47 LEU n 1 48 GLN n 1 49 GLN n 1 50 ILE n 1 51 TYR n 1 52 ALA n 1 53 GLU n 1 54 GLU n 1 55 ARG n 1 56 GLU n 1 57 ASN n 1 58 TYR n 1 59 LEU n 1 60 GLY n 1 61 LYS n 1 62 LEU n 1 63 GLU n 1 64 ARG n 1 65 GLU n 1 66 ILE n 1 67 THR n 1 68 ARG n 1 69 PHE n 1 70 PHE n 1 71 VAL n 1 72 ASP n 1 73 ARG n 1 74 GLY n 1 75 PHE n 1 76 LEU n 1 77 GLU n 1 78 ILE n 1 79 LYS n 1 80 SER n 1 81 PRO n 1 82 ILE n 1 83 LEU n 1 84 ILE n 1 85 PRO n 1 86 LEU n 1 87 GLU n 1 88 TYR n 1 89 ILE n 1 90 GLU n 1 91 ARG n 1 92 MET n 1 93 GLY n 1 94 ILE n 1 95 ASP n 1 96 ASN n 1 97 ASP n 1 98 THR n 1 99 GLU n 1 100 LEU n 1 101 SER n 1 102 LYS n 1 103 GLN n 1 104 ILE n 1 105 PHE n 1 106 ARG n 1 107 VAL n 1 108 ASP n 1 109 LYS n 1 110 ASN n 1 111 PHE n 1 112 CYS n 1 113 LEU n 1 114 ARG n 1 115 PRO n 1 116 MET n 1 117 LEU n 1 118 ALA n 1 119 PRO n 1 120 ASN n 1 121 LEU n 1 122 ALA n 1 123 ASN n 1 124 TYR n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 LEU n 1 129 ASP n 1 130 ARG n 1 131 ALA n 1 132 LEU n 1 133 PRO n 1 134 ASP n 1 135 PRO n 1 136 ILE n 1 137 LYS n 1 138 ILE n 1 139 PHE n 1 140 GLU n 1 141 ILE n 1 142 GLY n 1 143 PRO n 1 144 CYS n 1 145 TYR n 1 146 ARG n 1 147 LYS n 1 148 GLU n 1 149 SER n 1 150 ASP n 1 151 GLY n 1 152 LYS n 1 153 GLU n 1 154 HIS n 1 155 LEU n 1 156 GLU n 1 157 GLU n 1 158 PHE n 1 159 THR n 1 160 MET n 1 161 LEU n 1 162 ASN n 1 163 PHE n 1 164 CYS n 1 165 GLN n 1 166 MET n 1 167 GLY n 1 168 SER n 1 169 GLY n 1 170 CYS n 1 171 THR n 1 172 ARG n 1 173 GLU n 1 174 ASN n 1 175 LEU n 1 176 GLU n 1 177 SER n 1 178 ILE n 1 179 ILE n 1 180 THR n 1 181 ASP n 1 182 PHE n 1 183 LEU n 1 184 ASN n 1 185 HIS n 1 186 LEU n 1 187 GLY n 1 188 ILE n 1 189 ASP n 1 190 PHE n 1 191 LYS n 1 192 ILE n 1 193 VAL n 1 194 GLY n 1 195 ASP n 1 196 SER n 1 197 CYS n 1 198 MET n 1 199 VAL n 1 200 TYR n 1 201 GLY n 1 202 ASP n 1 203 THR n 1 204 LEU n 1 205 ASP n 1 206 VAL n 1 207 MET n 1 208 HIS n 1 209 GLY n 1 210 ASP n 1 211 LEU n 1 212 GLU n 1 213 LEU n 1 214 SER n 1 215 SER n 1 216 ALA n 1 217 VAL n 1 218 VAL n 1 219 GLY n 1 220 PRO n 1 221 ILE n 1 222 PRO n 1 223 LEU n 1 224 ASP n 1 225 ARG n 1 226 GLU n 1 227 TRP n 1 228 GLY n 1 229 ILE n 1 230 ASP n 1 231 LYS n 1 232 PRO n 1 233 TRP n 1 234 ILE n 1 235 GLY n 1 236 ALA n 1 237 GLY n 1 238 PHE n 1 239 GLY n 1 240 LEU n 1 241 GLU n 1 242 ARG n 1 243 LEU n 1 244 LEU n 1 245 LYS n 1 246 VAL n 1 247 LYS n 1 248 HIS n 1 249 ASP n 1 250 PHE n 1 251 LYS n 1 252 ASN n 1 253 ILE n 1 254 LYS n 1 255 ARG n 1 256 ALA n 1 257 ALA n 1 258 ARG n 1 259 SER n 1 260 GLU n 1 261 SER n 1 262 TYR n 1 263 TYR n 1 264 ASN n 1 265 GLY n 1 266 ILE n 1 267 SER n 1 268 THR n 1 269 ASN n 1 270 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 270 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pylS, MM_1445' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Methanosarcina mazei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2209 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 185 ? ? ? A . n A 1 2 SER 2 186 ? ? ? A . n A 1 3 HIS 3 187 ? ? ? A . n A 1 4 PRO 4 188 188 PRO PRO A . n A 1 5 ALA 5 189 189 ALA ALA A . n A 1 6 LEU 6 190 190 LEU LEU A . n A 1 7 THR 7 191 191 THR THR A . n A 1 8 LYS 8 192 192 LYS LYS A . n A 1 9 SER 9 193 193 SER SER A . n A 1 10 GLN 10 194 194 GLN GLN A . n A 1 11 THR 11 195 195 THR THR A . n A 1 12 ASP 12 196 196 ASP ASP A . n A 1 13 ARG 13 197 197 ARG ARG A . n A 1 14 LEU 14 198 198 LEU LEU A . n A 1 15 GLU 15 199 199 GLU GLU A . n A 1 16 VAL 16 200 200 VAL VAL A . n A 1 17 LEU 17 201 201 LEU LEU A . n A 1 18 LEU 18 202 202 LEU LEU A . n A 1 19 ASN 19 203 203 ASN ASN A . n A 1 20 PRO 20 204 204 PRO PRO A . n A 1 21 LYS 21 205 205 LYS LYS A . n A 1 22 ASP 22 206 206 ASP ASP A . n A 1 23 GLU 23 207 207 GLU GLU A . n A 1 24 ILE 24 208 208 ILE ILE A . n A 1 25 SER 25 209 209 SER SER A . n A 1 26 LEU 26 210 210 LEU LEU A . n A 1 27 ASN 27 211 ? ? ? A . n A 1 28 SER 28 212 212 SER SER A . n A 1 29 GLY 29 213 213 GLY GLY A . n A 1 30 LYS 30 214 214 LYS LYS A . n A 1 31 PRO 31 215 215 PRO PRO A . n A 1 32 PHE 32 216 216 PHE PHE A . n A 1 33 ARG 33 217 217 ARG ARG A . n A 1 34 GLU 34 218 218 GLU GLU A . n A 1 35 LEU 35 219 219 LEU LEU A . n A 1 36 GLU 36 220 220 GLU GLU A . n A 1 37 SER 37 221 221 SER SER A . n A 1 38 GLU 38 222 222 GLU GLU A . n A 1 39 LEU 39 223 223 LEU LEU A . n A 1 40 LEU 40 224 224 LEU LEU A . n A 1 41 SER 41 225 225 SER SER A . n A 1 42 ARG 42 226 226 ARG ARG A . n A 1 43 ARG 43 227 227 ARG ARG A . n A 1 44 LYS 44 228 228 LYS LYS A . n A 1 45 LYS 45 229 229 LYS LYS A . n A 1 46 ASP 46 230 230 ASP ASP A . n A 1 47 LEU 47 231 231 LEU LEU A . n A 1 48 GLN 48 232 232 GLN GLN A . n A 1 49 GLN 49 233 233 GLN GLN A . n A 1 50 ILE 50 234 234 ILE ILE A . n A 1 51 TYR 51 235 235 TYR TYR A . n A 1 52 ALA 52 236 236 ALA ALA A . n A 1 53 GLU 53 237 237 GLU GLU A . n A 1 54 GLU 54 238 238 GLU GLU A . n A 1 55 ARG 55 239 239 ARG ARG A . n A 1 56 GLU 56 240 240 GLU GLU A . n A 1 57 ASN 57 241 241 ASN ASN A . n A 1 58 TYR 58 242 242 TYR TYR A . n A 1 59 LEU 59 243 243 LEU LEU A . n A 1 60 GLY 60 244 244 GLY GLY A . n A 1 61 LYS 61 245 245 LYS LYS A . n A 1 62 LEU 62 246 246 LEU LEU A . n A 1 63 GLU 63 247 247 GLU GLU A . n A 1 64 ARG 64 248 248 ARG ARG A . n A 1 65 GLU 65 249 249 GLU GLU A . n A 1 66 ILE 66 250 250 ILE ILE A . n A 1 67 THR 67 251 251 THR THR A . n A 1 68 ARG 68 252 252 ARG ARG A . n A 1 69 PHE 69 253 253 PHE PHE A . n A 1 70 PHE 70 254 254 PHE PHE A . n A 1 71 VAL 71 255 255 VAL VAL A . n A 1 72 ASP 72 256 256 ASP ASP A . n A 1 73 ARG 73 257 257 ARG ARG A . n A 1 74 GLY 74 258 258 GLY GLY A . n A 1 75 PHE 75 259 259 PHE PHE A . n A 1 76 LEU 76 260 260 LEU LEU A . n A 1 77 GLU 77 261 261 GLU GLU A . n A 1 78 ILE 78 262 262 ILE ILE A . n A 1 79 LYS 79 263 263 LYS LYS A . n A 1 80 SER 80 264 264 SER SER A . n A 1 81 PRO 81 265 265 PRO PRO A . n A 1 82 ILE 82 266 266 ILE ILE A . n A 1 83 LEU 83 267 267 LEU LEU A . n A 1 84 ILE 84 268 268 ILE ILE A . n A 1 85 PRO 85 269 269 PRO PRO A . n A 1 86 LEU 86 270 270 LEU LEU A . n A 1 87 GLU 87 271 271 GLU GLU A . n A 1 88 TYR 88 272 272 TYR TYR A . n A 1 89 ILE 89 273 273 ILE ILE A . n A 1 90 GLU 90 274 274 GLU GLU A . n A 1 91 ARG 91 275 275 ARG ARG A . n A 1 92 MET 92 276 276 MET MET A . n A 1 93 GLY 93 277 277 GLY GLY A . n A 1 94 ILE 94 278 278 ILE ILE A . n A 1 95 ASP 95 279 279 ASP ASP A . n A 1 96 ASN 96 280 280 ASN ASN A . n A 1 97 ASP 97 281 281 ASP ASP A . n A 1 98 THR 98 282 282 THR THR A . n A 1 99 GLU 99 283 283 GLU GLU A . n A 1 100 LEU 100 284 284 LEU LEU A . n A 1 101 SER 101 285 285 SER SER A . n A 1 102 LYS 102 286 286 LYS LYS A . n A 1 103 GLN 103 287 287 GLN GLN A . n A 1 104 ILE 104 288 288 ILE ILE A . n A 1 105 PHE 105 289 289 PHE PHE A . n A 1 106 ARG 106 290 290 ARG ARG A . n A 1 107 VAL 107 291 291 VAL VAL A . n A 1 108 ASP 108 292 292 ASP ASP A . n A 1 109 LYS 109 293 293 LYS LYS A . n A 1 110 ASN 110 294 294 ASN ASN A . n A 1 111 PHE 111 295 295 PHE PHE A . n A 1 112 CYS 112 296 296 CYS CYS A . n A 1 113 LEU 113 297 297 LEU LEU A . n A 1 114 ARG 114 298 298 ARG ARG A . n A 1 115 PRO 115 299 299 PRO PRO A . n A 1 116 MET 116 300 300 MET MET A . n A 1 117 LEU 117 301 301 LEU LEU A . n A 1 118 ALA 118 302 302 ALA ALA A . n A 1 119 PRO 119 303 303 PRO PRO A . n A 1 120 ASN 120 304 304 ASN ASN A . n A 1 121 LEU 121 305 305 LEU LEU A . n A 1 122 ALA 122 306 306 ALA ALA A . n A 1 123 ASN 123 307 307 ASN ASN A . n A 1 124 TYR 124 308 308 TYR TYR A . n A 1 125 LEU 125 309 309 LEU LEU A . n A 1 126 ARG 126 310 310 ARG ARG A . n A 1 127 LYS 127 311 311 LYS LYS A . n A 1 128 LEU 128 312 312 LEU LEU A . n A 1 129 ASP 129 313 313 ASP ASP A . n A 1 130 ARG 130 314 314 ARG ARG A . n A 1 131 ALA 131 315 315 ALA ALA A . n A 1 132 LEU 132 316 316 LEU LEU A . n A 1 133 PRO 133 317 317 PRO PRO A . n A 1 134 ASP 134 318 318 ASP ASP A . n A 1 135 PRO 135 319 319 PRO PRO A . n A 1 136 ILE 136 320 320 ILE ILE A . n A 1 137 LYS 137 321 321 LYS LYS A . n A 1 138 ILE 138 322 322 ILE ILE A . n A 1 139 PHE 139 323 323 PHE PHE A . n A 1 140 GLU 140 324 324 GLU GLU A . n A 1 141 ILE 141 325 325 ILE ILE A . n A 1 142 GLY 142 326 326 GLY GLY A . n A 1 143 PRO 143 327 327 PRO PRO A . n A 1 144 CYS 144 328 328 CYS CYS A . n A 1 145 TYR 145 329 329 TYR TYR A . n A 1 146 ARG 146 330 330 ARG ARG A . n A 1 147 LYS 147 331 331 LYS LYS A . n A 1 148 GLU 148 332 332 GLU GLU A . n A 1 149 SER 149 333 ? ? ? A . n A 1 150 ASP 150 334 ? ? ? A . n A 1 151 GLY 151 335 335 GLY GLY A . n A 1 152 LYS 152 336 336 LYS LYS A . n A 1 153 GLU 153 337 337 GLU GLU A . n A 1 154 HIS 154 338 338 HIS HIS A . n A 1 155 LEU 155 339 339 LEU LEU A . n A 1 156 GLU 156 340 340 GLU GLU A . n A 1 157 GLU 157 341 341 GLU GLU A . n A 1 158 PHE 158 342 342 PHE PHE A . n A 1 159 THR 159 343 343 THR THR A . n A 1 160 MET 160 344 344 MET MET A . n A 1 161 LEU 161 345 345 LEU LEU A . n A 1 162 ASN 162 346 346 ASN ASN A . n A 1 163 PHE 163 347 347 PHE PHE A . n A 1 164 CYS 164 348 348 CYS CYS A . n A 1 165 GLN 165 349 349 GLN GLN A . n A 1 166 MET 166 350 350 MET MET A . n A 1 167 GLY 167 351 351 GLY GLY A . n A 1 168 SER 168 352 352 SER SER A . n A 1 169 GLY 169 353 353 GLY GLY A . n A 1 170 CYS 170 354 354 CYS CYS A . n A 1 171 THR 171 355 355 THR THR A . n A 1 172 ARG 172 356 356 ARG ARG A . n A 1 173 GLU 173 357 357 GLU GLU A . n A 1 174 ASN 174 358 358 ASN ASN A . n A 1 175 LEU 175 359 359 LEU LEU A . n A 1 176 GLU 176 360 360 GLU GLU A . n A 1 177 SER 177 361 361 SER SER A . n A 1 178 ILE 178 362 362 ILE ILE A . n A 1 179 ILE 179 363 363 ILE ILE A . n A 1 180 THR 180 364 364 THR THR A . n A 1 181 ASP 181 365 365 ASP ASP A . n A 1 182 PHE 182 366 366 PHE PHE A . n A 1 183 LEU 183 367 367 LEU LEU A . n A 1 184 ASN 184 368 368 ASN ASN A . n A 1 185 HIS 185 369 369 HIS HIS A . n A 1 186 LEU 186 370 370 LEU LEU A . n A 1 187 GLY 187 371 371 GLY GLY A . n A 1 188 ILE 188 372 372 ILE ILE A . n A 1 189 ASP 189 373 373 ASP ASP A . n A 1 190 PHE 190 374 374 PHE PHE A . n A 1 191 LYS 191 375 375 LYS LYS A . n A 1 192 ILE 192 376 376 ILE ILE A . n A 1 193 VAL 193 377 377 VAL VAL A . n A 1 194 GLY 194 378 378 GLY GLY A . n A 1 195 ASP 195 379 379 ASP ASP A . n A 1 196 SER 196 380 ? ? ? A . n A 1 197 CYS 197 381 ? ? ? A . n A 1 198 MET 198 382 ? ? ? A . n A 1 199 VAL 199 383 ? ? ? A . n A 1 200 TYR 200 384 ? ? ? A . n A 1 201 GLY 201 385 385 GLY GLY A . n A 1 202 ASP 202 386 386 ASP ASP A . n A 1 203 THR 203 387 387 THR THR A . n A 1 204 LEU 204 388 388 LEU LEU A . n A 1 205 ASP 205 389 389 ASP ASP A . n A 1 206 VAL 206 390 390 VAL VAL A . n A 1 207 MET 207 391 391 MET MET A . n A 1 208 HIS 208 392 392 HIS HIS A . n A 1 209 GLY 209 393 393 GLY GLY A . n A 1 210 ASP 210 394 394 ASP ASP A . n A 1 211 LEU 211 395 395 LEU LEU A . n A 1 212 GLU 212 396 396 GLU GLU A . n A 1 213 LEU 213 397 397 LEU LEU A . n A 1 214 SER 214 398 398 SER SER A . n A 1 215 SER 215 399 399 SER SER A . n A 1 216 ALA 216 400 400 ALA ALA A . n A 1 217 VAL 217 401 401 VAL VAL A . n A 1 218 VAL 218 402 402 VAL VAL A . n A 1 219 GLY 219 403 403 GLY GLY A . n A 1 220 PRO 220 404 404 PRO PRO A . n A 1 221 ILE 221 405 405 ILE ILE A . n A 1 222 PRO 222 406 406 PRO PRO A . n A 1 223 LEU 223 407 407 LEU LEU A . n A 1 224 ASP 224 408 408 ASP ASP A . n A 1 225 ARG 225 409 409 ARG ARG A . n A 1 226 GLU 226 410 410 GLU GLU A . n A 1 227 TRP 227 411 411 TRP TRP A . n A 1 228 GLY 228 412 412 GLY GLY A . n A 1 229 ILE 229 413 413 ILE ILE A . n A 1 230 ASP 230 414 414 ASP ASP A . n A 1 231 LYS 231 415 415 LYS LYS A . n A 1 232 PRO 232 416 416 PRO PRO A . n A 1 233 TRP 233 417 417 TRP TRP A . n A 1 234 ILE 234 418 418 ILE ILE A . n A 1 235 GLY 235 419 419 GLY GLY A . n A 1 236 ALA 236 420 420 ALA ALA A . n A 1 237 GLY 237 421 421 GLY GLY A . n A 1 238 PHE 238 422 422 PHE PHE A . n A 1 239 GLY 239 423 423 GLY GLY A . n A 1 240 LEU 240 424 424 LEU LEU A . n A 1 241 GLU 241 425 425 GLU GLU A . n A 1 242 ARG 242 426 426 ARG ARG A . n A 1 243 LEU 243 427 427 LEU LEU A . n A 1 244 LEU 244 428 428 LEU LEU A . n A 1 245 LYS 245 429 429 LYS LYS A . n A 1 246 VAL 246 430 430 VAL VAL A . n A 1 247 LYS 247 431 431 LYS LYS A . n A 1 248 HIS 248 432 432 HIS HIS A . n A 1 249 ASP 249 433 433 ASP ASP A . n A 1 250 PHE 250 434 434 PHE PHE A . n A 1 251 LYS 251 435 435 LYS LYS A . n A 1 252 ASN 252 436 436 ASN ASN A . n A 1 253 ILE 253 437 437 ILE ILE A . n A 1 254 LYS 254 438 438 LYS LYS A . n A 1 255 ARG 255 439 439 ARG ARG A . n A 1 256 ALA 256 440 440 ALA ALA A . n A 1 257 ALA 257 441 441 ALA ALA A . n A 1 258 ARG 258 442 442 ARG ARG A . n A 1 259 SER 259 443 443 SER SER A . n A 1 260 GLU 260 444 444 GLU GLU A . n A 1 261 SER 261 445 445 SER SER A . n A 1 262 TYR 262 446 446 TYR TYR A . n A 1 263 TYR 263 447 447 TYR TYR A . n A 1 264 ASN 264 448 448 ASN ASN A . n A 1 265 GLY 265 449 449 GLY GLY A . n A 1 266 ILE 266 450 450 ILE ILE A . n A 1 267 SER 267 451 451 SER SER A . n A 1 268 THR 268 452 452 THR THR A . n A 1 269 ASN 269 453 453 ASN ASN A . n A 1 270 LEU 270 454 454 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1PE 1 501 455 1PE LIG A . C 3 NA 1 502 456 NA NA A . D 4 GOL 1 503 457 GOL GOL A . E 4 GOL 1 504 458 GOL GOL A . F 5 EDO 1 505 459 EDO EDO A . G 5 EDO 1 506 460 EDO EDO A . H 5 EDO 1 507 461 EDO EDO A . I 6 HOH 1 601 60 HOH HOH A . I 6 HOH 2 602 6 HOH HOH A . I 6 HOH 3 603 8 HOH HOH A . I 6 HOH 4 604 21 HOH HOH A . I 6 HOH 5 605 45 HOH HOH A . I 6 HOH 6 606 40 HOH HOH A . I 6 HOH 7 607 32 HOH HOH A . I 6 HOH 8 608 36 HOH HOH A . I 6 HOH 9 609 9 HOH HOH A . I 6 HOH 10 610 26 HOH HOH A . I 6 HOH 11 611 7 HOH HOH A . I 6 HOH 12 612 3 HOH HOH A . I 6 HOH 13 613 50 HOH HOH A . I 6 HOH 14 614 54 HOH HOH A . I 6 HOH 15 615 49 HOH HOH A . I 6 HOH 16 616 2 HOH HOH A . I 6 HOH 17 617 5 HOH HOH A . I 6 HOH 18 618 46 HOH HOH A . I 6 HOH 19 619 30 HOH HOH A . I 6 HOH 20 620 17 HOH HOH A . I 6 HOH 21 621 44 HOH HOH A . I 6 HOH 22 622 14 HOH HOH A . I 6 HOH 23 623 39 HOH HOH A . I 6 HOH 24 624 20 HOH HOH A . I 6 HOH 25 625 55 HOH HOH A . I 6 HOH 26 626 43 HOH HOH A . I 6 HOH 27 627 58 HOH HOH A . I 6 HOH 28 628 4 HOH HOH A . I 6 HOH 29 629 23 HOH HOH A . I 6 HOH 30 630 61 HOH HOH A . I 6 HOH 31 631 57 HOH HOH A . I 6 HOH 32 632 24 HOH HOH A . I 6 HOH 33 633 15 HOH HOH A . I 6 HOH 34 634 56 HOH HOH A . I 6 HOH 35 635 16 HOH HOH A . I 6 HOH 36 636 1 HOH HOH A . I 6 HOH 37 637 42 HOH HOH A . I 6 HOH 38 638 12 HOH HOH A . I 6 HOH 39 639 29 HOH HOH A . I 6 HOH 40 640 33 HOH HOH A . I 6 HOH 41 641 11 HOH HOH A . I 6 HOH 42 642 13 HOH HOH A . I 6 HOH 43 643 27 HOH HOH A . I 6 HOH 44 644 52 HOH HOH A . I 6 HOH 45 645 28 HOH HOH A . I 6 HOH 46 646 18 HOH HOH A . I 6 HOH 47 647 51 HOH HOH A . I 6 HOH 48 648 59 HOH HOH A . I 6 HOH 49 649 10 HOH HOH A . I 6 HOH 50 650 22 HOH HOH A . I 6 HOH 51 651 37 HOH HOH A . I 6 HOH 52 652 34 HOH HOH A . I 6 HOH 53 653 47 HOH HOH A . I 6 HOH 54 654 38 HOH HOH A . I 6 HOH 55 655 62 HOH HOH A . I 6 HOH 56 656 25 HOH HOH A . I 6 HOH 57 657 64 HOH HOH A . I 6 HOH 58 658 41 HOH HOH A . I 6 HOH 59 659 31 HOH HOH A . I 6 HOH 60 660 65 HOH HOH A . I 6 HOH 61 661 35 HOH HOH A . I 6 HOH 62 662 63 HOH HOH A . I 6 HOH 63 663 53 HOH HOH A . I 6 HOH 64 664 19 HOH HOH A . I 6 HOH 65 665 48 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 205 ? CG ? A LYS 21 CG 2 1 Y 1 A LYS 205 ? CD ? A LYS 21 CD 3 1 Y 1 A LYS 205 ? CE ? A LYS 21 CE 4 1 Y 1 A LYS 205 ? NZ ? A LYS 21 NZ 5 1 Y 1 A LYS 214 ? CG ? A LYS 30 CG 6 1 Y 1 A LYS 214 ? CD ? A LYS 30 CD 7 1 Y 1 A LYS 214 ? CE ? A LYS 30 CE 8 1 Y 1 A LYS 214 ? NZ ? A LYS 30 NZ 9 1 Y 1 A GLU 218 ? CG ? A GLU 34 CG 10 1 Y 1 A GLU 218 ? CD ? A GLU 34 CD 11 1 Y 1 A GLU 218 ? OE1 ? A GLU 34 OE1 12 1 Y 1 A GLU 218 ? OE2 ? A GLU 34 OE2 13 1 Y 1 A GLU 271 ? CG ? A GLU 87 CG 14 1 Y 1 A GLU 271 ? CD ? A GLU 87 CD 15 1 Y 1 A GLU 271 ? OE1 ? A GLU 87 OE1 16 1 Y 1 A GLU 271 ? OE2 ? A GLU 87 OE2 17 1 Y 1 A ASN 280 ? CG ? A ASN 96 CG 18 1 Y 1 A ASN 280 ? OD1 ? A ASN 96 OD1 19 1 Y 1 A ASN 280 ? ND2 ? A ASN 96 ND2 20 1 Y 1 A ASP 281 ? CG ? A ASP 97 CG 21 1 Y 1 A ASP 281 ? OD1 ? A ASP 97 OD1 22 1 Y 1 A ASP 281 ? OD2 ? A ASP 97 OD2 23 1 Y 1 A GLU 283 ? CG ? A GLU 99 CG 24 1 Y 1 A GLU 283 ? CD ? A GLU 99 CD 25 1 Y 1 A GLU 283 ? OE1 ? A GLU 99 OE1 26 1 Y 1 A GLU 283 ? OE2 ? A GLU 99 OE2 27 1 Y 1 A LEU 284 ? CG ? A LEU 100 CG 28 1 Y 1 A LEU 284 ? CD1 ? A LEU 100 CD1 29 1 Y 1 A LEU 284 ? CD2 ? A LEU 100 CD2 30 1 Y 1 A LYS 286 ? CG ? A LYS 102 CG 31 1 Y 1 A LYS 286 ? CD ? A LYS 102 CD 32 1 Y 1 A LYS 286 ? CE ? A LYS 102 CE 33 1 Y 1 A LYS 286 ? NZ ? A LYS 102 NZ 34 1 Y 1 A LYS 293 ? CG ? A LYS 109 CG 35 1 Y 1 A LYS 293 ? CD ? A LYS 109 CD 36 1 Y 1 A LYS 293 ? CE ? A LYS 109 CE 37 1 Y 1 A LYS 293 ? NZ ? A LYS 109 NZ 38 1 Y 1 A ARG 330 ? CG ? A ARG 146 CG 39 1 Y 1 A ARG 330 ? CD ? A ARG 146 CD 40 1 Y 1 A ARG 330 ? NE ? A ARG 146 NE 41 1 Y 1 A ARG 330 ? CZ ? A ARG 146 CZ 42 1 Y 1 A ARG 330 ? NH1 ? A ARG 146 NH1 43 1 Y 1 A ARG 330 ? NH2 ? A ARG 146 NH2 44 1 Y 1 A LYS 336 ? CG ? A LYS 152 CG 45 1 Y 1 A LYS 336 ? CD ? A LYS 152 CD 46 1 Y 1 A LYS 336 ? CE ? A LYS 152 CE 47 1 Y 1 A LYS 336 ? NZ ? A LYS 152 NZ 48 1 Y 1 A GLU 337 ? CG ? A GLU 153 CG 49 1 Y 1 A GLU 337 ? CD ? A GLU 153 CD 50 1 Y 1 A GLU 337 ? OE1 ? A GLU 153 OE1 51 1 Y 1 A GLU 337 ? OE2 ? A GLU 153 OE2 52 1 Y 1 A LYS 375 ? CG ? A LYS 191 CG 53 1 Y 1 A LYS 375 ? CD ? A LYS 191 CD 54 1 Y 1 A LYS 375 ? CE ? A LYS 191 CE 55 1 Y 1 A LYS 375 ? NZ ? A LYS 191 NZ 56 1 Y 1 A LYS 435 ? CG ? A LYS 251 CG 57 1 Y 1 A LYS 435 ? CD ? A LYS 251 CD 58 1 Y 1 A LYS 435 ? CE ? A LYS 251 CE 59 1 Y 1 A LYS 435 ? NZ ? A LYS 251 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 8RIS _cell.details ? _cell.formula_units_Z ? _cell.length_a 104.306 _cell.length_a_esd ? _cell.length_b 104.306 _cell.length_b_esd ? _cell.length_c 70.807 _cell.length_c_esd ? _cell.volume 667152.946 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RIS _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall 'P 64' _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RIS _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.58 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 65.63 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.9 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05M L-Arginine, 0.05M L-Glutamic acid monosodium salt hydrate, 28% v/v PEG Smear Broad, 5% v/v Glycerol, drop ratio 1:1' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-09-26 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.873128 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.873128 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 71.64 _reflns.entry_id 8RIS _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.7 _reflns.d_resolution_low 45.17 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12180 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.92 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.3 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.17 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.2225 _reflns.pdbx_Rpim_I_all 0.05042 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.2166 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.797 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.97 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1207 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 18.2 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 3.239 _reflns_shell.pdbx_Rpim_I_all 0.7564 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.514 _reflns_shell.pdbx_CC_star 0.824 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 99.92 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 3.112 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 73.82 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8RIS _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.70 _refine.ls_d_res_low 45.17 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12173 _refine.ls_number_reflns_R_free 609 _refine.ls_number_reflns_R_work 11564 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.94 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2180 _refine.ls_R_factor_R_free 0.2438 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2166 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.9922 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4613 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 45.17 _refine_hist.number_atoms_solvent 65 _refine_hist.number_atoms_total 2148 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2042 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 41 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0012 ? 2175 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.4024 ? 2931 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0388 ? 321 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0041 ? 384 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 8.1762 ? 833 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.70 2.97 . . 151 2874 99.90 . . . . 0.3316 . . . . . . . . . . . 0.3775 'X-RAY DIFFRACTION' 2.97 3.40 . . 151 2866 99.93 . . . . 0.2600 . . . . . . . . . . . 0.2729 'X-RAY DIFFRACTION' 3.40 4.28 . . 151 2879 100.00 . . . . 0.2020 . . . . . . . . . . . 0.2207 'X-RAY DIFFRACTION' 4.29 45.17 . . 156 2945 99.94 . . . . 0.1943 . . . . . . . . . . . 0.2246 # _struct.entry_id 8RIS _struct.title 'Computationally redesigend variant of Pyrrolysyl-tRNA Synthetase (Y306A)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RIS _struct_keywords.text 'Pyrrolysyl-tRNA synthetase, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PYLS_METMA _struct_ref.pdbx_db_accession Q8PWY1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PALTKSQTDRLEVLLNPKDEISLNSGKPFRELESELLSRRKKDLQQIYAEERENYLGKLEREITRFFVDRGFLEIKSPIL IPLEYIERMGIDNDTELSKQIFRVDKNFCLRPMLAPNLYNYLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNF CQMGSGCTRENLESIITDFLNHLGIDFKIVGDSCMVYGDTLDVMHGDLELSSAVVGPIPLDREWGIDKPWIGAGFGLERL LKVKHDFKNIKRAARSESYYNGISTNL ; _struct_ref.pdbx_align_begin 188 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8RIS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 270 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8PWY1 _struct_ref_seq.db_align_beg 188 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 454 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 188 _struct_ref_seq.pdbx_auth_seq_align_end 454 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8RIS GLY A 1 ? UNP Q8PWY1 ? ? 'expression tag' 185 1 1 8RIS SER A 2 ? UNP Q8PWY1 ? ? 'expression tag' 186 2 1 8RIS HIS A 3 ? UNP Q8PWY1 ? ? 'expression tag' 187 3 1 8RIS ALA A 122 ? UNP Q8PWY1 TYR 306 conflict 306 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 7 ? LEU A 17 ? THR A 191 LEU A 201 1 ? 11 HELX_P HELX_P2 AA2 PRO A 31 ? GLU A 53 ? PRO A 215 GLU A 237 1 ? 23 HELX_P HELX_P3 AA3 ASN A 57 ? ASP A 72 ? ASN A 241 ASP A 256 1 ? 16 HELX_P HELX_P4 AA4 LEU A 86 ? ARG A 91 ? LEU A 270 ARG A 275 1 ? 6 HELX_P HELX_P5 AA5 LEU A 117 ? ASP A 129 ? LEU A 301 ASP A 313 1 ? 13 HELX_P HELX_P6 AA6 THR A 171 ? GLY A 187 ? THR A 355 GLY A 371 1 ? 17 HELX_P HELX_P7 AA7 ILE A 221 ? GLY A 228 ? ILE A 405 GLY A 412 5 ? 8 HELX_P HELX_P8 AA8 LEU A 240 ? HIS A 248 ? LEU A 424 HIS A 432 1 ? 9 HELX_P HELX_P9 AA9 ASN A 252 ? ALA A 256 ? ASN A 436 ALA A 440 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id metalc1 _struct_conn.conn_type_id metalc _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 202 _struct_conn.ptnr1_label_atom_id OD1 _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id NA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id NA _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 386 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NA _struct_conn.ptnr2_auth_seq_id 502 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 3.129 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 134 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 318 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 135 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 319 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.96 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 76 ? ILE A 78 ? LEU A 260 ILE A 262 AA1 2 ILE A 136 ? TYR A 145 ? ILE A 320 TYR A 329 AA1 3 GLU A 157 ? MET A 166 ? GLU A 341 MET A 350 AA1 4 TRP A 233 ? GLY A 239 ? TRP A 417 GLY A 423 AA2 1 LEU A 83 ? PRO A 85 ? LEU A 267 PRO A 269 AA2 2 PHE A 111 ? LEU A 113 ? PHE A 295 LEU A 297 AA3 1 LYS A 191 ? VAL A 193 ? LYS A 375 VAL A 377 AA3 2 THR A 203 ? HIS A 208 ? THR A 387 HIS A 392 AA3 3 LEU A 211 ? VAL A 217 ? LEU A 395 VAL A 401 AA4 1 TYR A 262 ? TYR A 263 ? TYR A 446 TYR A 447 AA4 2 ILE A 266 ? SER A 267 ? ILE A 450 SER A 451 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 78 ? N ILE A 262 O PHE A 139 ? O PHE A 323 AA1 2 3 N GLY A 142 ? N GLY A 326 O MET A 160 ? O MET A 344 AA1 3 4 N LEU A 161 ? N LEU A 345 O PHE A 238 ? O PHE A 422 AA2 1 2 N ILE A 84 ? N ILE A 268 O CYS A 112 ? O CYS A 296 AA3 1 2 N VAL A 193 ? N VAL A 377 O ASP A 205 ? O ASP A 389 AA3 2 3 N VAL A 206 ? N VAL A 390 O LEU A 213 ? O LEU A 397 AA4 1 2 N TYR A 263 ? N TYR A 447 O ILE A 266 ? O ILE A 450 # _pdbx_entry_details.entry_id 8RIS _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 207 ? ? -107.29 56.84 2 1 GLU A 237 ? ? -127.91 -80.36 3 1 ASN A 280 ? ? 58.97 -134.64 4 1 VAL A 291 ? ? -101.64 -73.23 5 1 ASN A 294 ? ? -131.39 -35.26 6 1 ALA A 315 ? ? -134.12 -33.77 7 1 LYS A 336 ? ? -109.06 -158.40 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x-y,x,z+2/3 3 y,-x+y,z+1/3 4 -y,x-y,z+1/3 5 -x+y,-x,z+2/3 6 -x,-y,z # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 185 ? A GLY 1 2 1 Y 1 A SER 186 ? A SER 2 3 1 Y 1 A HIS 187 ? A HIS 3 4 1 Y 1 A ASN 211 ? A ASN 27 5 1 Y 1 A SER 333 ? A SER 149 6 1 Y 1 A ASP 334 ? A ASP 150 7 1 Y 1 A SER 380 ? A SER 196 8 1 Y 1 A CYS 381 ? A CYS 197 9 1 Y 1 A MET 382 ? A MET 198 10 1 Y 1 A VAL 383 ? A VAL 199 11 1 Y 1 A TYR 384 ? A TYR 200 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PE OH2 O N N 1 1PE C12 C N N 2 1PE C22 C N N 3 1PE OH3 O N N 4 1PE C13 C N N 5 1PE C23 C N N 6 1PE OH4 O N N 7 1PE C14 C N N 8 1PE C24 C N N 9 1PE OH5 O N N 10 1PE C15 C N N 11 1PE C25 C N N 12 1PE OH6 O N N 13 1PE C16 C N N 14 1PE C26 C N N 15 1PE OH7 O N N 16 1PE HO2 H N N 17 1PE H121 H N N 18 1PE H122 H N N 19 1PE H221 H N N 20 1PE H222 H N N 21 1PE H131 H N N 22 1PE H132 H N N 23 1PE H231 H N N 24 1PE H232 H N N 25 1PE H141 H N N 26 1PE H142 H N N 27 1PE H241 H N N 28 1PE H242 H N N 29 1PE H151 H N N 30 1PE H152 H N N 31 1PE H251 H N N 32 1PE H252 H N N 33 1PE H161 H N N 34 1PE H162 H N N 35 1PE H261 H N N 36 1PE H262 H N N 37 1PE HO7 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CYS N N N N 112 CYS CA C N R 113 CYS C C N N 114 CYS O O N N 115 CYS CB C N N 116 CYS SG S N N 117 CYS OXT O N N 118 CYS H H N N 119 CYS H2 H N N 120 CYS HA H N N 121 CYS HB2 H N N 122 CYS HB3 H N N 123 CYS HG H N N 124 CYS HXT H N N 125 EDO C1 C N N 126 EDO O1 O N N 127 EDO C2 C N N 128 EDO O2 O N N 129 EDO H11 H N N 130 EDO H12 H N N 131 EDO HO1 H N N 132 EDO H21 H N N 133 EDO H22 H N N 134 EDO HO2 H N N 135 GLN N N N N 136 GLN CA C N S 137 GLN C C N N 138 GLN O O N N 139 GLN CB C N N 140 GLN CG C N N 141 GLN CD C N N 142 GLN OE1 O N N 143 GLN NE2 N N N 144 GLN OXT O N N 145 GLN H H N N 146 GLN H2 H N N 147 GLN HA H N N 148 GLN HB2 H N N 149 GLN HB3 H N N 150 GLN HG2 H N N 151 GLN HG3 H N N 152 GLN HE21 H N N 153 GLN HE22 H N N 154 GLN HXT H N N 155 GLU N N N N 156 GLU CA C N S 157 GLU C C N N 158 GLU O O N N 159 GLU CB C N N 160 GLU CG C N N 161 GLU CD C N N 162 GLU OE1 O N N 163 GLU OE2 O N N 164 GLU OXT O N N 165 GLU H H N N 166 GLU H2 H N N 167 GLU HA H N N 168 GLU HB2 H N N 169 GLU HB3 H N N 170 GLU HG2 H N N 171 GLU HG3 H N N 172 GLU HE2 H N N 173 GLU HXT H N N 174 GLY N N N N 175 GLY CA C N N 176 GLY C C N N 177 GLY O O N N 178 GLY OXT O N N 179 GLY H H N N 180 GLY H2 H N N 181 GLY HA2 H N N 182 GLY HA3 H N N 183 GLY HXT H N N 184 GOL C1 C N N 185 GOL O1 O N N 186 GOL C2 C N N 187 GOL O2 O N N 188 GOL C3 C N N 189 GOL O3 O N N 190 GOL H11 H N N 191 GOL H12 H N N 192 GOL HO1 H N N 193 GOL H2 H N N 194 GOL HO2 H N N 195 GOL H31 H N N 196 GOL H32 H N N 197 GOL HO3 H N N 198 HIS N N N N 199 HIS CA C N S 200 HIS C C N N 201 HIS O O N N 202 HIS CB C N N 203 HIS CG C Y N 204 HIS ND1 N Y N 205 HIS CD2 C Y N 206 HIS CE1 C Y N 207 HIS NE2 N Y N 208 HIS OXT O N N 209 HIS H H N N 210 HIS H2 H N N 211 HIS HA H N N 212 HIS HB2 H N N 213 HIS HB3 H N N 214 HIS HD1 H N N 215 HIS HD2 H N N 216 HIS HE1 H N N 217 HIS HE2 H N N 218 HIS HXT H N N 219 HOH O O N N 220 HOH H1 H N N 221 HOH H2 H N N 222 ILE N N N N 223 ILE CA C N S 224 ILE C C N N 225 ILE O O N N 226 ILE CB C N S 227 ILE CG1 C N N 228 ILE CG2 C N N 229 ILE CD1 C N N 230 ILE OXT O N N 231 ILE H H N N 232 ILE H2 H N N 233 ILE HA H N N 234 ILE HB H N N 235 ILE HG12 H N N 236 ILE HG13 H N N 237 ILE HG21 H N N 238 ILE HG22 H N N 239 ILE HG23 H N N 240 ILE HD11 H N N 241 ILE HD12 H N N 242 ILE HD13 H N N 243 ILE HXT H N N 244 LEU N N N N 245 LEU CA C N S 246 LEU C C N N 247 LEU O O N N 248 LEU CB C N N 249 LEU CG C N N 250 LEU CD1 C N N 251 LEU CD2 C N N 252 LEU OXT O N N 253 LEU H H N N 254 LEU H2 H N N 255 LEU HA H N N 256 LEU HB2 H N N 257 LEU HB3 H N N 258 LEU HG H N N 259 LEU HD11 H N N 260 LEU HD12 H N N 261 LEU HD13 H N N 262 LEU HD21 H N N 263 LEU HD22 H N N 264 LEU HD23 H N N 265 LEU HXT H N N 266 LYS N N N N 267 LYS CA C N S 268 LYS C C N N 269 LYS O O N N 270 LYS CB C N N 271 LYS CG C N N 272 LYS CD C N N 273 LYS CE C N N 274 LYS NZ N N N 275 LYS OXT O N N 276 LYS H H N N 277 LYS H2 H N N 278 LYS HA H N N 279 LYS HB2 H N N 280 LYS HB3 H N N 281 LYS HG2 H N N 282 LYS HG3 H N N 283 LYS HD2 H N N 284 LYS HD3 H N N 285 LYS HE2 H N N 286 LYS HE3 H N N 287 LYS HZ1 H N N 288 LYS HZ2 H N N 289 LYS HZ3 H N N 290 LYS HXT H N N 291 MET N N N N 292 MET CA C N S 293 MET C C N N 294 MET O O N N 295 MET CB C N N 296 MET CG C N N 297 MET SD S N N 298 MET CE C N N 299 MET OXT O N N 300 MET H H N N 301 MET H2 H N N 302 MET HA H N N 303 MET HB2 H N N 304 MET HB3 H N N 305 MET HG2 H N N 306 MET HG3 H N N 307 MET HE1 H N N 308 MET HE2 H N N 309 MET HE3 H N N 310 MET HXT H N N 311 NA NA NA N N 312 PHE N N N N 313 PHE CA C N S 314 PHE C C N N 315 PHE O O N N 316 PHE CB C N N 317 PHE CG C Y N 318 PHE CD1 C Y N 319 PHE CD2 C Y N 320 PHE CE1 C Y N 321 PHE CE2 C Y N 322 PHE CZ C Y N 323 PHE OXT O N N 324 PHE H H N N 325 PHE H2 H N N 326 PHE HA H N N 327 PHE HB2 H N N 328 PHE HB3 H N N 329 PHE HD1 H N N 330 PHE HD2 H N N 331 PHE HE1 H N N 332 PHE HE2 H N N 333 PHE HZ H N N 334 PHE HXT H N N 335 PRO N N N N 336 PRO CA C N S 337 PRO C C N N 338 PRO O O N N 339 PRO CB C N N 340 PRO CG C N N 341 PRO CD C N N 342 PRO OXT O N N 343 PRO H H N N 344 PRO HA H N N 345 PRO HB2 H N N 346 PRO HB3 H N N 347 PRO HG2 H N N 348 PRO HG3 H N N 349 PRO HD2 H N N 350 PRO HD3 H N N 351 PRO HXT H N N 352 SER N N N N 353 SER CA C N S 354 SER C C N N 355 SER O O N N 356 SER CB C N N 357 SER OG O N N 358 SER OXT O N N 359 SER H H N N 360 SER H2 H N N 361 SER HA H N N 362 SER HB2 H N N 363 SER HB3 H N N 364 SER HG H N N 365 SER HXT H N N 366 THR N N N N 367 THR CA C N S 368 THR C C N N 369 THR O O N N 370 THR CB C N R 371 THR OG1 O N N 372 THR CG2 C N N 373 THR OXT O N N 374 THR H H N N 375 THR H2 H N N 376 THR HA H N N 377 THR HB H N N 378 THR HG1 H N N 379 THR HG21 H N N 380 THR HG22 H N N 381 THR HG23 H N N 382 THR HXT H N N 383 TRP N N N N 384 TRP CA C N S 385 TRP C C N N 386 TRP O O N N 387 TRP CB C N N 388 TRP CG C Y N 389 TRP CD1 C Y N 390 TRP CD2 C Y N 391 TRP NE1 N Y N 392 TRP CE2 C Y N 393 TRP CE3 C Y N 394 TRP CZ2 C Y N 395 TRP CZ3 C Y N 396 TRP CH2 C Y N 397 TRP OXT O N N 398 TRP H H N N 399 TRP H2 H N N 400 TRP HA H N N 401 TRP HB2 H N N 402 TRP HB3 H N N 403 TRP HD1 H N N 404 TRP HE1 H N N 405 TRP HE3 H N N 406 TRP HZ2 H N N 407 TRP HZ3 H N N 408 TRP HH2 H N N 409 TRP HXT H N N 410 TYR N N N N 411 TYR CA C N S 412 TYR C C N N 413 TYR O O N N 414 TYR CB C N N 415 TYR CG C Y N 416 TYR CD1 C Y N 417 TYR CD2 C Y N 418 TYR CE1 C Y N 419 TYR CE2 C Y N 420 TYR CZ C Y N 421 TYR OH O N N 422 TYR OXT O N N 423 TYR H H N N 424 TYR H2 H N N 425 TYR HA H N N 426 TYR HB2 H N N 427 TYR HB3 H N N 428 TYR HD1 H N N 429 TYR HD2 H N N 430 TYR HE1 H N N 431 TYR HE2 H N N 432 TYR HH H N N 433 TYR HXT H N N 434 VAL N N N N 435 VAL CA C N S 436 VAL C C N N 437 VAL O O N N 438 VAL CB C N N 439 VAL CG1 C N N 440 VAL CG2 C N N 441 VAL OXT O N N 442 VAL H H N N 443 VAL H2 H N N 444 VAL HA H N N 445 VAL HB H N N 446 VAL HG11 H N N 447 VAL HG12 H N N 448 VAL HG13 H N N 449 VAL HG21 H N N 450 VAL HG22 H N N 451 VAL HG23 H N N 452 VAL HXT H N N 453 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PE OH2 C12 sing N N 1 1PE OH2 HO2 sing N N 2 1PE C12 C22 sing N N 3 1PE C12 H121 sing N N 4 1PE C12 H122 sing N N 5 1PE C22 OH3 sing N N 6 1PE C22 H221 sing N N 7 1PE C22 H222 sing N N 8 1PE OH3 C23 sing N N 9 1PE C13 C23 sing N N 10 1PE C13 OH4 sing N N 11 1PE C13 H131 sing N N 12 1PE C13 H132 sing N N 13 1PE C23 H231 sing N N 14 1PE C23 H232 sing N N 15 1PE OH4 C24 sing N N 16 1PE C14 C24 sing N N 17 1PE C14 OH5 sing N N 18 1PE C14 H141 sing N N 19 1PE C14 H142 sing N N 20 1PE C24 H241 sing N N 21 1PE C24 H242 sing N N 22 1PE OH5 C25 sing N N 23 1PE C15 C25 sing N N 24 1PE C15 OH6 sing N N 25 1PE C15 H151 sing N N 26 1PE C15 H152 sing N N 27 1PE C25 H251 sing N N 28 1PE C25 H252 sing N N 29 1PE OH6 C26 sing N N 30 1PE C16 C26 sing N N 31 1PE C16 OH7 sing N N 32 1PE C16 H161 sing N N 33 1PE C16 H162 sing N N 34 1PE C26 H261 sing N N 35 1PE C26 H262 sing N N 36 1PE OH7 HO7 sing N N 37 ALA N CA sing N N 38 ALA N H sing N N 39 ALA N H2 sing N N 40 ALA CA C sing N N 41 ALA CA CB sing N N 42 ALA CA HA sing N N 43 ALA C O doub N N 44 ALA C OXT sing N N 45 ALA CB HB1 sing N N 46 ALA CB HB2 sing N N 47 ALA CB HB3 sing N N 48 ALA OXT HXT sing N N 49 ARG N CA sing N N 50 ARG N H sing N N 51 ARG N H2 sing N N 52 ARG CA C sing N N 53 ARG CA CB sing N N 54 ARG CA HA sing N N 55 ARG C O doub N N 56 ARG C OXT sing N N 57 ARG CB CG sing N N 58 ARG CB HB2 sing N N 59 ARG CB HB3 sing N N 60 ARG CG CD sing N N 61 ARG CG HG2 sing N N 62 ARG CG HG3 sing N N 63 ARG CD NE sing N N 64 ARG CD HD2 sing N N 65 ARG CD HD3 sing N N 66 ARG NE CZ sing N N 67 ARG NE HE sing N N 68 ARG CZ NH1 sing N N 69 ARG CZ NH2 doub N N 70 ARG NH1 HH11 sing N N 71 ARG NH1 HH12 sing N N 72 ARG NH2 HH21 sing N N 73 ARG NH2 HH22 sing N N 74 ARG OXT HXT sing N N 75 ASN N CA sing N N 76 ASN N H sing N N 77 ASN N H2 sing N N 78 ASN CA C sing N N 79 ASN CA CB sing N N 80 ASN CA HA sing N N 81 ASN C O doub N N 82 ASN C OXT sing N N 83 ASN CB CG sing N N 84 ASN CB HB2 sing N N 85 ASN CB HB3 sing N N 86 ASN CG OD1 doub N N 87 ASN CG ND2 sing N N 88 ASN ND2 HD21 sing N N 89 ASN ND2 HD22 sing N N 90 ASN OXT HXT sing N N 91 ASP N CA sing N N 92 ASP N H sing N N 93 ASP N H2 sing N N 94 ASP CA C sing N N 95 ASP CA CB sing N N 96 ASP CA HA sing N N 97 ASP C O doub N N 98 ASP C OXT sing N N 99 ASP CB CG sing N N 100 ASP CB HB2 sing N N 101 ASP CB HB3 sing N N 102 ASP CG OD1 doub N N 103 ASP CG OD2 sing N N 104 ASP OD2 HD2 sing N N 105 ASP OXT HXT sing N N 106 CYS N CA sing N N 107 CYS N H sing N N 108 CYS N H2 sing N N 109 CYS CA C sing N N 110 CYS CA CB sing N N 111 CYS CA HA sing N N 112 CYS C O doub N N 113 CYS C OXT sing N N 114 CYS CB SG sing N N 115 CYS CB HB2 sing N N 116 CYS CB HB3 sing N N 117 CYS SG HG sing N N 118 CYS OXT HXT sing N N 119 EDO C1 O1 sing N N 120 EDO C1 C2 sing N N 121 EDO C1 H11 sing N N 122 EDO C1 H12 sing N N 123 EDO O1 HO1 sing N N 124 EDO C2 O2 sing N N 125 EDO C2 H21 sing N N 126 EDO C2 H22 sing N N 127 EDO O2 HO2 sing N N 128 GLN N CA sing N N 129 GLN N H sing N N 130 GLN N H2 sing N N 131 GLN CA C sing N N 132 GLN CA CB sing N N 133 GLN CA HA sing N N 134 GLN C O doub N N 135 GLN C OXT sing N N 136 GLN CB CG sing N N 137 GLN CB HB2 sing N N 138 GLN CB HB3 sing N N 139 GLN CG CD sing N N 140 GLN CG HG2 sing N N 141 GLN CG HG3 sing N N 142 GLN CD OE1 doub N N 143 GLN CD NE2 sing N N 144 GLN NE2 HE21 sing N N 145 GLN NE2 HE22 sing N N 146 GLN OXT HXT sing N N 147 GLU N CA sing N N 148 GLU N H sing N N 149 GLU N H2 sing N N 150 GLU CA C sing N N 151 GLU CA CB sing N N 152 GLU CA HA sing N N 153 GLU C O doub N N 154 GLU C OXT sing N N 155 GLU CB CG sing N N 156 GLU CB HB2 sing N N 157 GLU CB HB3 sing N N 158 GLU CG CD sing N N 159 GLU CG HG2 sing N N 160 GLU CG HG3 sing N N 161 GLU CD OE1 doub N N 162 GLU CD OE2 sing N N 163 GLU OE2 HE2 sing N N 164 GLU OXT HXT sing N N 165 GLY N CA sing N N 166 GLY N H sing N N 167 GLY N H2 sing N N 168 GLY CA C sing N N 169 GLY CA HA2 sing N N 170 GLY CA HA3 sing N N 171 GLY C O doub N N 172 GLY C OXT sing N N 173 GLY OXT HXT sing N N 174 GOL C1 O1 sing N N 175 GOL C1 C2 sing N N 176 GOL C1 H11 sing N N 177 GOL C1 H12 sing N N 178 GOL O1 HO1 sing N N 179 GOL C2 O2 sing N N 180 GOL C2 C3 sing N N 181 GOL C2 H2 sing N N 182 GOL O2 HO2 sing N N 183 GOL C3 O3 sing N N 184 GOL C3 H31 sing N N 185 GOL C3 H32 sing N N 186 GOL O3 HO3 sing N N 187 HIS N CA sing N N 188 HIS N H sing N N 189 HIS N H2 sing N N 190 HIS CA C sing N N 191 HIS CA CB sing N N 192 HIS CA HA sing N N 193 HIS C O doub N N 194 HIS C OXT sing N N 195 HIS CB CG sing N N 196 HIS CB HB2 sing N N 197 HIS CB HB3 sing N N 198 HIS CG ND1 sing Y N 199 HIS CG CD2 doub Y N 200 HIS ND1 CE1 doub Y N 201 HIS ND1 HD1 sing N N 202 HIS CD2 NE2 sing Y N 203 HIS CD2 HD2 sing N N 204 HIS CE1 NE2 sing Y N 205 HIS CE1 HE1 sing N N 206 HIS NE2 HE2 sing N N 207 HIS OXT HXT sing N N 208 HOH O H1 sing N N 209 HOH O H2 sing N N 210 ILE N CA sing N N 211 ILE N H sing N N 212 ILE N H2 sing N N 213 ILE CA C sing N N 214 ILE CA CB sing N N 215 ILE CA HA sing N N 216 ILE C O doub N N 217 ILE C OXT sing N N 218 ILE CB CG1 sing N N 219 ILE CB CG2 sing N N 220 ILE CB HB sing N N 221 ILE CG1 CD1 sing N N 222 ILE CG1 HG12 sing N N 223 ILE CG1 HG13 sing N N 224 ILE CG2 HG21 sing N N 225 ILE CG2 HG22 sing N N 226 ILE CG2 HG23 sing N N 227 ILE CD1 HD11 sing N N 228 ILE CD1 HD12 sing N N 229 ILE CD1 HD13 sing N N 230 ILE OXT HXT sing N N 231 LEU N CA sing N N 232 LEU N H sing N N 233 LEU N H2 sing N N 234 LEU CA C sing N N 235 LEU CA CB sing N N 236 LEU CA HA sing N N 237 LEU C O doub N N 238 LEU C OXT sing N N 239 LEU CB CG sing N N 240 LEU CB HB2 sing N N 241 LEU CB HB3 sing N N 242 LEU CG CD1 sing N N 243 LEU CG CD2 sing N N 244 LEU CG HG sing N N 245 LEU CD1 HD11 sing N N 246 LEU CD1 HD12 sing N N 247 LEU CD1 HD13 sing N N 248 LEU CD2 HD21 sing N N 249 LEU CD2 HD22 sing N N 250 LEU CD2 HD23 sing N N 251 LEU OXT HXT sing N N 252 LYS N CA sing N N 253 LYS N H sing N N 254 LYS N H2 sing N N 255 LYS CA C sing N N 256 LYS CA CB sing N N 257 LYS CA HA sing N N 258 LYS C O doub N N 259 LYS C OXT sing N N 260 LYS CB CG sing N N 261 LYS CB HB2 sing N N 262 LYS CB HB3 sing N N 263 LYS CG CD sing N N 264 LYS CG HG2 sing N N 265 LYS CG HG3 sing N N 266 LYS CD CE sing N N 267 LYS CD HD2 sing N N 268 LYS CD HD3 sing N N 269 LYS CE NZ sing N N 270 LYS CE HE2 sing N N 271 LYS CE HE3 sing N N 272 LYS NZ HZ1 sing N N 273 LYS NZ HZ2 sing N N 274 LYS NZ HZ3 sing N N 275 LYS OXT HXT sing N N 276 MET N CA sing N N 277 MET N H sing N N 278 MET N H2 sing N N 279 MET CA C sing N N 280 MET CA CB sing N N 281 MET CA HA sing N N 282 MET C O doub N N 283 MET C OXT sing N N 284 MET CB CG sing N N 285 MET CB HB2 sing N N 286 MET CB HB3 sing N N 287 MET CG SD sing N N 288 MET CG HG2 sing N N 289 MET CG HG3 sing N N 290 MET SD CE sing N N 291 MET CE HE1 sing N N 292 MET CE HE2 sing N N 293 MET CE HE3 sing N N 294 MET OXT HXT sing N N 295 PHE N CA sing N N 296 PHE N H sing N N 297 PHE N H2 sing N N 298 PHE CA C sing N N 299 PHE CA CB sing N N 300 PHE CA HA sing N N 301 PHE C O doub N N 302 PHE C OXT sing N N 303 PHE CB CG sing N N 304 PHE CB HB2 sing N N 305 PHE CB HB3 sing N N 306 PHE CG CD1 doub Y N 307 PHE CG CD2 sing Y N 308 PHE CD1 CE1 sing Y N 309 PHE CD1 HD1 sing N N 310 PHE CD2 CE2 doub Y N 311 PHE CD2 HD2 sing N N 312 PHE CE1 CZ doub Y N 313 PHE CE1 HE1 sing N N 314 PHE CE2 CZ sing Y N 315 PHE CE2 HE2 sing N N 316 PHE CZ HZ sing N N 317 PHE OXT HXT sing N N 318 PRO N CA sing N N 319 PRO N CD sing N N 320 PRO N H sing N N 321 PRO CA C sing N N 322 PRO CA CB sing N N 323 PRO CA HA sing N N 324 PRO C O doub N N 325 PRO C OXT sing N N 326 PRO CB CG sing N N 327 PRO CB HB2 sing N N 328 PRO CB HB3 sing N N 329 PRO CG CD sing N N 330 PRO CG HG2 sing N N 331 PRO CG HG3 sing N N 332 PRO CD HD2 sing N N 333 PRO CD HD3 sing N N 334 PRO OXT HXT sing N N 335 SER N CA sing N N 336 SER N H sing N N 337 SER N H2 sing N N 338 SER CA C sing N N 339 SER CA CB sing N N 340 SER CA HA sing N N 341 SER C O doub N N 342 SER C OXT sing N N 343 SER CB OG sing N N 344 SER CB HB2 sing N N 345 SER CB HB3 sing N N 346 SER OG HG sing N N 347 SER OXT HXT sing N N 348 THR N CA sing N N 349 THR N H sing N N 350 THR N H2 sing N N 351 THR CA C sing N N 352 THR CA CB sing N N 353 THR CA HA sing N N 354 THR C O doub N N 355 THR C OXT sing N N 356 THR CB OG1 sing N N 357 THR CB CG2 sing N N 358 THR CB HB sing N N 359 THR OG1 HG1 sing N N 360 THR CG2 HG21 sing N N 361 THR CG2 HG22 sing N N 362 THR CG2 HG23 sing N N 363 THR OXT HXT sing N N 364 TRP N CA sing N N 365 TRP N H sing N N 366 TRP N H2 sing N N 367 TRP CA C sing N N 368 TRP CA CB sing N N 369 TRP CA HA sing N N 370 TRP C O doub N N 371 TRP C OXT sing N N 372 TRP CB CG sing N N 373 TRP CB HB2 sing N N 374 TRP CB HB3 sing N N 375 TRP CG CD1 doub Y N 376 TRP CG CD2 sing Y N 377 TRP CD1 NE1 sing Y N 378 TRP CD1 HD1 sing N N 379 TRP CD2 CE2 doub Y N 380 TRP CD2 CE3 sing Y N 381 TRP NE1 CE2 sing Y N 382 TRP NE1 HE1 sing N N 383 TRP CE2 CZ2 sing Y N 384 TRP CE3 CZ3 doub Y N 385 TRP CE3 HE3 sing N N 386 TRP CZ2 CH2 doub Y N 387 TRP CZ2 HZ2 sing N N 388 TRP CZ3 CH2 sing Y N 389 TRP CZ3 HZ3 sing N N 390 TRP CH2 HH2 sing N N 391 TRP OXT HXT sing N N 392 TYR N CA sing N N 393 TYR N H sing N N 394 TYR N H2 sing N N 395 TYR CA C sing N N 396 TYR CA CB sing N N 397 TYR CA HA sing N N 398 TYR C O doub N N 399 TYR C OXT sing N N 400 TYR CB CG sing N N 401 TYR CB HB2 sing N N 402 TYR CB HB3 sing N N 403 TYR CG CD1 doub Y N 404 TYR CG CD2 sing Y N 405 TYR CD1 CE1 sing Y N 406 TYR CD1 HD1 sing N N 407 TYR CD2 CE2 doub Y N 408 TYR CD2 HD2 sing N N 409 TYR CE1 CZ doub Y N 410 TYR CE1 HE1 sing N N 411 TYR CE2 CZ sing Y N 412 TYR CE2 HE2 sing N N 413 TYR CZ OH sing N N 414 TYR OH HH sing N N 415 TYR OXT HXT sing N N 416 VAL N CA sing N N 417 VAL N H sing N N 418 VAL N H2 sing N N 419 VAL CA C sing N N 420 VAL CA CB sing N N 421 VAL CA HA sing N N 422 VAL C O doub N N 423 VAL C OXT sing N N 424 VAL CB CG1 sing N N 425 VAL CB CG2 sing N N 426 VAL CB HB sing N N 427 VAL CG1 HG11 sing N N 428 VAL CG1 HG12 sing N N 429 VAL CG1 HG13 sing N N 430 VAL CG2 HG21 sing N N 431 VAL CG2 HG22 sing N N 432 VAL CG2 HG23 sing N N 433 VAL OXT HXT sing N N 434 # _pdbx_audit_support.funding_organization 'European Research Council (ERC)' _pdbx_audit_support.country 'European Union' _pdbx_audit_support.grant_number 802217 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2zim _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 64' _space_group.name_Hall 'P 64' _space_group.IT_number 172 _space_group.crystal_system hexagonal _space_group.id 1 # _atom_sites.entry_id 8RIS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.009587 _atom_sites.fract_transf_matrix[1][2] 0.005535 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011070 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014123 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_