data_8RLA # _entry.id 8RLA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.409 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RLA pdb_00008rla 10.2210/pdb8rla/pdb WWPDB D_1292135656 ? ? EMDB EMD-19336 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-01-15 ? 2 'EM metadata' 1 0 2025-01-15 ? 3 'Additional map' 1 0 2025-01-15 ? 4 FSC 1 0 2025-01-15 ? 5 'Half map' 1 0 2025-01-15 1 6 'Half map' 1 0 2025-01-15 2 7 Image 1 0 2025-01-15 ? 8 Mask 1 0 2025-01-15 ? 9 'Primary map' 1 0 2025-01-15 ? 10 'Structure model' 1 1 2025-12-24 ? 11 'EM metadata' 1 1 2025-12-24 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 'Additional map' repository 'Initial release' ? ? 4 4 FSC repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 'Half map' repository 'Initial release' ? ? 7 7 Image repository 'Initial release' ? ? 8 8 Mask repository 'Initial release' ? ? 9 9 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 10 'Structure model' 'Data collection' 2 10 'Structure model' 'Database references' 3 11 'EM metadata' 'Database references' 4 11 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 10 'Structure model' citation 2 10 'Structure model' citation_author 3 10 'Structure model' em_admin 4 11 'EM metadata' citation 5 11 'EM metadata' citation_author 6 11 'EM metadata' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 10 'Structure model' '_citation.country' 2 10 'Structure model' '_citation.journal_abbrev' 3 10 'Structure model' '_citation.journal_id_CSD' 4 10 'Structure model' '_citation.journal_id_ISSN' 5 10 'Structure model' '_citation.pdbx_database_id_DOI' 6 10 'Structure model' '_citation.pdbx_database_id_PubMed' 7 10 'Structure model' '_citation.title' 8 10 'Structure model' '_citation.year' 9 10 'Structure model' '_citation_author.identifier_ORCID' 10 10 'Structure model' '_citation_author.name' 11 10 'Structure model' '_em_admin.last_update' 12 11 'EM metadata' '_citation.country' 13 11 'EM metadata' '_citation.journal_abbrev' 14 11 'EM metadata' '_citation.journal_id_CSD' 15 11 'EM metadata' '_citation.journal_id_ISSN' 16 11 'EM metadata' '_citation.pdbx_database_id_DOI' 17 11 'EM metadata' '_citation.pdbx_database_id_PubMed' 18 11 'EM metadata' '_citation.title' 19 11 'EM metadata' '_citation.year' 20 11 'EM metadata' '_citation_author.identifier_ORCID' 21 11 'EM metadata' '_citation_author.name' 22 11 'EM metadata' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RLA _pdbx_database_status.recvd_initial_deposition_date 2024-01-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - RECQL5 local refinement' _pdbx_database_related.db_id EMD-19336 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 4 robert.gilbert@magd.ox.ac.uk Robert Gilbert J.C. 'principal investigator/group leader' 0000-0001-9336-5604 5 david.sauer@cmd.ox.ac.uk David Sauer B. 'principal investigator/group leader' 0000-0001-9291-4640 6 ben.davis@rfi.ac.uk Benjamin Davis G. 'principal investigator/group leader' 0000-0002-5056-407X 7 frank.vondelft@cmd.ox.ac.uk Frank 'von Delft' ? 'principal investigator/group leader' 0000-0003-0378-0017 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yi, G.' 1 0009-0004-6509-4893 'Ye, M.' 2 0000-0001-6324-4238 'Mamalis, D.' 3 0000-0002-4396-7495 'Sauer, D.B.' 4 0000-0001-9291-4640 'von Delft, F.' 5 0000-0003-0378-0017 'Davis, B.G.' 6 0000-0002-5056-407X 'Gilbert, R.J.C.' 7 0000-0001-9336-5604 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title ;Covalently constrained 'Di-Gembodies' enable parallel structure solutions by cryo-EM. ; _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-025-01972-7 _citation.pdbx_database_id_PubMed 40817135 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yi, G.' 1 ? primary 'Mamalis, D.' 2 ? primary 'Ye, M.' 3 0000-0001-6324-4238 primary 'Carrique, L.' 4 0000-0001-5332-8593 primary 'Fairhead, M.' 5 ? primary 'Li, H.' 6 0000-0002-5482-9936 primary 'Duerr, K.L.' 7 ? primary 'Zhang, P.' 8 0000-0003-1803-691X primary 'Sauer, D.B.' 9 0000-0001-9291-4640 primary 'von Delft, F.' 10 0000-0003-0378-0017 primary 'Davis, B.G.' 11 0000-0002-5056-407X primary 'Gilbert, R.J.C.' 12 0000-0001-9336-5604 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Gluebody G5-006' 13775.173 1 ? ? ? ? 2 polymer man 'ATP-dependent DNA helicase Q5' 49203.820 1 3.6.4.12 ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'DNA helicase,RecQ-like type 5,RecQ5,RecQ protein-like 5' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENT VYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS ; ;SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENT VYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS ; K ? 2 'polypeptide(L)' no no ;PERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLL TLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRP DYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALG QEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFV AHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGC RHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSSW ; ;PERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLL TLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRP DYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALG QEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFV AHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGC RHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSSW ; A ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ALA n 1 4 GLN n 1 5 VAL n 1 6 GLN n 1 7 LEU n 1 8 VAL n 1 9 GLU n 1 10 ASN n 1 11 GLY n 1 12 GLY n 1 13 GLY n 1 14 CYS n 1 15 VAL n 1 16 LYS n 1 17 ALA n 1 18 GLY n 1 19 GLY n 1 20 SER n 1 21 LEU n 1 22 ARG n 1 23 LEU n 1 24 SER n 1 25 CYS n 1 26 ALA n 1 27 ALA n 1 28 SER n 1 29 GLY n 1 30 SER n 1 31 ILE n 1 32 PHE n 1 33 SER n 1 34 ILE n 1 35 ASN n 1 36 ARG n 1 37 MET n 1 38 THR n 1 39 TRP n 1 40 TYR n 1 41 ARG n 1 42 GLN n 1 43 ALA n 1 44 PRO n 1 45 GLY n 1 46 LYS n 1 47 GLU n 1 48 ARG n 1 49 GLU n 1 50 TRP n 1 51 VAL n 1 52 ALA n 1 53 ALA n 1 54 ILE n 1 55 THR n 1 56 SER n 1 57 GLY n 1 58 GLY n 1 59 SER n 1 60 THR n 1 61 ASN n 1 62 TYR n 1 63 ALA n 1 64 ASP n 1 65 SER n 1 66 VAL n 1 67 LYS n 1 68 GLY n 1 69 ARG n 1 70 PHE n 1 71 THR n 1 72 ILE n 1 73 SER n 1 74 ARG n 1 75 ASP n 1 76 ASN n 1 77 ALA n 1 78 GLU n 1 79 ASN n 1 80 THR n 1 81 VAL n 1 82 TYR n 1 83 LEU n 1 84 GLN n 1 85 MET n 1 86 ASN n 1 87 SER n 1 88 LEU n 1 89 LYS n 1 90 PRO n 1 91 GLU n 1 92 ASP n 1 93 THR n 1 94 ALA n 1 95 VAL n 1 96 TYR n 1 97 TYR n 1 98 CYS n 1 99 GLU n 1 100 ALA n 1 101 TYR n 1 102 GLY n 1 103 THR n 1 104 TYR n 1 105 THR n 1 106 LEU n 1 107 ALA n 1 108 PRO n 1 109 THR n 1 110 GLY n 1 111 GLU n 1 112 GLY n 1 113 GLU n 1 114 TYR n 1 115 ASP n 1 116 ASP n 1 117 TYR n 1 118 TRP n 1 119 GLY n 1 120 GLN n 1 121 GLY n 1 122 THR n 1 123 GLN n 1 124 VAL n 1 125 MET n 1 126 VAL n 1 127 SER n 2 1 PRO n 2 2 GLU n 2 3 ARG n 2 4 ARG n 2 5 VAL n 2 6 ARG n 2 7 SER n 2 8 THR n 2 9 LEU n 2 10 LYS n 2 11 LYS n 2 12 VAL n 2 13 PHE n 2 14 GLY n 2 15 PHE n 2 16 ASP n 2 17 SER n 2 18 PHE n 2 19 LYS n 2 20 THR n 2 21 PRO n 2 22 LEU n 2 23 GLN n 2 24 GLU n 2 25 SER n 2 26 ALA n 2 27 THR n 2 28 MET n 2 29 ALA n 2 30 VAL n 2 31 VAL n 2 32 LYS n 2 33 GLY n 2 34 ASN n 2 35 LYS n 2 36 ASP n 2 37 VAL n 2 38 PHE n 2 39 VAL n 2 40 CYS n 2 41 MET n 2 42 PRO n 2 43 THR n 2 44 GLY n 2 45 ALA n 2 46 GLY n 2 47 LYS n 2 48 SER n 2 49 LEU n 2 50 CYS n 2 51 TYR n 2 52 GLN n 2 53 LEU n 2 54 PRO n 2 55 ALA n 2 56 LEU n 2 57 LEU n 2 58 ALA n 2 59 LYS n 2 60 GLY n 2 61 ILE n 2 62 THR n 2 63 ILE n 2 64 VAL n 2 65 VAL n 2 66 SER n 2 67 PRO n 2 68 LEU n 2 69 ILE n 2 70 ALA n 2 71 LEU n 2 72 ILE n 2 73 GLN n 2 74 ASP n 2 75 GLN n 2 76 VAL n 2 77 ASP n 2 78 HIS n 2 79 LEU n 2 80 LEU n 2 81 THR n 2 82 LEU n 2 83 LYS n 2 84 VAL n 2 85 ARG n 2 86 VAL n 2 87 SER n 2 88 SER n 2 89 LEU n 2 90 ASN n 2 91 SER n 2 92 LYS n 2 93 LEU n 2 94 SER n 2 95 ALA n 2 96 GLN n 2 97 GLU n 2 98 ARG n 2 99 LYS n 2 100 GLU n 2 101 LEU n 2 102 LEU n 2 103 ALA n 2 104 ASP n 2 105 LEU n 2 106 GLU n 2 107 ARG n 2 108 GLU n 2 109 LYS n 2 110 PRO n 2 111 GLN n 2 112 THR n 2 113 LYS n 2 114 ILE n 2 115 LEU n 2 116 TYR n 2 117 ILE n 2 118 THR n 2 119 PRO n 2 120 GLU n 2 121 MET n 2 122 ALA n 2 123 ALA n 2 124 SER n 2 125 SER n 2 126 SER n 2 127 PHE n 2 128 GLN n 2 129 PRO n 2 130 THR n 2 131 LEU n 2 132 ASN n 2 133 SER n 2 134 LEU n 2 135 VAL n 2 136 SER n 2 137 ARG n 2 138 HIS n 2 139 LEU n 2 140 LEU n 2 141 SER n 2 142 TYR n 2 143 LEU n 2 144 VAL n 2 145 VAL n 2 146 ASP n 2 147 GLU n 2 148 ALA n 2 149 HIS n 2 150 CYS n 2 151 VAL n 2 152 SER n 2 153 GLN n 2 154 TRP n 2 155 GLY n 2 156 HIS n 2 157 ASP n 2 158 PHE n 2 159 ARG n 2 160 PRO n 2 161 ASP n 2 162 TYR n 2 163 LEU n 2 164 ARG n 2 165 LEU n 2 166 GLY n 2 167 ALA n 2 168 LEU n 2 169 ARG n 2 170 SER n 2 171 ARG n 2 172 LEU n 2 173 GLY n 2 174 HIS n 2 175 ALA n 2 176 PRO n 2 177 CYS n 2 178 VAL n 2 179 ALA n 2 180 LEU n 2 181 THR n 2 182 ALA n 2 183 THR n 2 184 ALA n 2 185 THR n 2 186 PRO n 2 187 GLN n 2 188 VAL n 2 189 GLN n 2 190 GLU n 2 191 ASP n 2 192 VAL n 2 193 PHE n 2 194 ALA n 2 195 ALA n 2 196 LEU n 2 197 HIS n 2 198 LEU n 2 199 LYS n 2 200 LYS n 2 201 PRO n 2 202 VAL n 2 203 ALA n 2 204 ILE n 2 205 PHE n 2 206 LYS n 2 207 THR n 2 208 PRO n 2 209 CYS n 2 210 PHE n 2 211 ARG n 2 212 ALA n 2 213 ASN n 2 214 LEU n 2 215 PHE n 2 216 TYR n 2 217 ASP n 2 218 VAL n 2 219 GLN n 2 220 PHE n 2 221 LYS n 2 222 GLU n 2 223 LEU n 2 224 ILE n 2 225 SER n 2 226 ASP n 2 227 PRO n 2 228 TYR n 2 229 GLY n 2 230 ASN n 2 231 LEU n 2 232 LYS n 2 233 ASP n 2 234 PHE n 2 235 CYS n 2 236 LEU n 2 237 LYS n 2 238 ALA n 2 239 LEU n 2 240 GLY n 2 241 GLN n 2 242 GLU n 2 243 ALA n 2 244 ASP n 2 245 LYS n 2 246 GLY n 2 247 LEU n 2 248 SER n 2 249 GLY n 2 250 CYS n 2 251 GLY n 2 252 ILE n 2 253 VAL n 2 254 TYR n 2 255 CYS n 2 256 ARG n 2 257 THR n 2 258 ARG n 2 259 GLU n 2 260 ALA n 2 261 CYS n 2 262 GLU n 2 263 GLN n 2 264 LEU n 2 265 ALA n 2 266 ILE n 2 267 GLU n 2 268 LEU n 2 269 SER n 2 270 CYS n 2 271 ARG n 2 272 GLY n 2 273 VAL n 2 274 ASN n 2 275 ALA n 2 276 LYS n 2 277 ALA n 2 278 TYR n 2 279 HIS n 2 280 ALA n 2 281 GLY n 2 282 LEU n 2 283 LYS n 2 284 ALA n 2 285 SER n 2 286 GLU n 2 287 ARG n 2 288 THR n 2 289 LEU n 2 290 VAL n 2 291 GLN n 2 292 ASN n 2 293 ASP n 2 294 TRP n 2 295 MET n 2 296 GLU n 2 297 GLU n 2 298 LYS n 2 299 VAL n 2 300 PRO n 2 301 VAL n 2 302 ILE n 2 303 VAL n 2 304 ALA n 2 305 THR n 2 306 ILE n 2 307 SER n 2 308 PHE n 2 309 GLY n 2 310 MET n 2 311 GLY n 2 312 VAL n 2 313 ASP n 2 314 LYS n 2 315 ALA n 2 316 ASN n 2 317 VAL n 2 318 ARG n 2 319 PHE n 2 320 VAL n 2 321 ALA n 2 322 HIS n 2 323 TRP n 2 324 ASN n 2 325 ILE n 2 326 ALA n 2 327 LYS n 2 328 SER n 2 329 MET n 2 330 ALA n 2 331 GLY n 2 332 TYR n 2 333 TYR n 2 334 GLN n 2 335 GLU n 2 336 SER n 2 337 GLY n 2 338 ARG n 2 339 ALA n 2 340 GLY n 2 341 ARG n 2 342 ASP n 2 343 GLY n 2 344 LYS n 2 345 PRO n 2 346 SER n 2 347 TRP n 2 348 CYS n 2 349 ARG n 2 350 LEU n 2 351 TYR n 2 352 TYR n 2 353 SER n 2 354 ARG n 2 355 ASN n 2 356 ASP n 2 357 ARG n 2 358 ASP n 2 359 GLN n 2 360 VAL n 2 361 SER n 2 362 PHE n 2 363 LEU n 2 364 ILE n 2 365 ARG n 2 366 LYS n 2 367 GLU n 2 368 VAL n 2 369 ALA n 2 370 LYS n 2 371 LEU n 2 372 GLN n 2 373 GLU n 2 374 LYS n 2 375 ARG n 2 376 GLY n 2 377 ASN n 2 378 LYS n 2 379 ALA n 2 380 SER n 2 381 ASP n 2 382 LYS n 2 383 ALA n 2 384 THR n 2 385 ILE n 2 386 MET n 2 387 ALA n 2 388 PHE n 2 389 ASP n 2 390 ALA n 2 391 LEU n 2 392 VAL n 2 393 THR n 2 394 PHE n 2 395 CYS n 2 396 GLU n 2 397 GLU n 2 398 LEU n 2 399 GLY n 2 400 CYS n 2 401 ARG n 2 402 HIS n 2 403 ALA n 2 404 ALA n 2 405 ILE n 2 406 ALA n 2 407 LYS n 2 408 TYR n 2 409 PHE n 2 410 GLY n 2 411 ASP n 2 412 ALA n 2 413 LEU n 2 414 PRO n 2 415 ALA n 2 416 CYS n 2 417 ALA n 2 418 LYS n 2 419 GLY n 2 420 CYS n 2 421 ASP n 2 422 HIS n 2 423 CYS n 2 424 GLN n 2 425 ASN n 2 426 PRO n 2 427 THR n 2 428 ALA n 2 429 VAL n 2 430 ARG n 2 431 ARG n 2 432 ARG n 2 433 LEU n 2 434 GLU n 2 435 ALA n 2 436 LEU n 2 437 GLU n 2 438 ARG n 2 439 SER n 2 440 SER n 2 441 SER n 2 442 TRP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 127 ? ? ? ? ? ? ? ? ? 'Lama glama' 9844 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 442 human ? 'RECQL5, RECQ5' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? K . n A 1 2 MET 2 -1 ? ? ? K . n A 1 3 ALA 3 0 ? ? ? K . n A 1 4 GLN 4 1 1 GLN GLN K . n A 1 5 VAL 5 2 2 VAL VAL K . n A 1 6 GLN 6 3 3 GLN GLN K . n A 1 7 LEU 7 4 4 LEU LEU K . n A 1 8 VAL 8 5 5 VAL VAL K . n A 1 9 GLU 9 6 6 GLU GLU K . n A 1 10 ASN 10 7 7 ASN ASN K . n A 1 11 GLY 11 8 8 GLY GLY K . n A 1 12 GLY 12 9 9 GLY GLY K . n A 1 13 GLY 13 10 10 GLY GLY K . n A 1 14 CYS 14 11 11 CYS CYS K . n A 1 15 VAL 15 12 12 VAL VAL K . n A 1 16 LYS 16 13 13 LYS LYS K . n A 1 17 ALA 17 14 14 ALA ALA K . n A 1 18 GLY 18 15 15 GLY GLY K . n A 1 19 GLY 19 16 16 GLY GLY K . n A 1 20 SER 20 17 17 SER SER K . n A 1 21 LEU 21 18 18 LEU LEU K . n A 1 22 ARG 22 19 19 ARG ARG K . n A 1 23 LEU 23 20 20 LEU LEU K . n A 1 24 SER 24 21 21 SER SER K . n A 1 25 CYS 25 22 22 CYS CYS K . n A 1 26 ALA 26 23 23 ALA ALA K . n A 1 27 ALA 27 24 24 ALA ALA K . n A 1 28 SER 28 25 25 SER SER K . n A 1 29 GLY 29 26 26 GLY GLY K . n A 1 30 SER 30 27 27 SER SER K . n A 1 31 ILE 31 28 28 ILE ILE K . n A 1 32 PHE 32 29 29 PHE PHE K . n A 1 33 SER 33 30 30 SER SER K . n A 1 34 ILE 34 31 31 ILE ILE K . n A 1 35 ASN 35 32 32 ASN ASN K . n A 1 36 ARG 36 33 33 ARG ARG K . n A 1 37 MET 37 34 34 MET MET K . n A 1 38 THR 38 35 35 THR THR K . n A 1 39 TRP 39 36 36 TRP TRP K . n A 1 40 TYR 40 37 37 TYR TYR K . n A 1 41 ARG 41 38 38 ARG ARG K . n A 1 42 GLN 42 39 39 GLN GLN K . n A 1 43 ALA 43 40 40 ALA ALA K . n A 1 44 PRO 44 41 41 PRO PRO K . n A 1 45 GLY 45 42 42 GLY GLY K . n A 1 46 LYS 46 43 43 LYS LYS K . n A 1 47 GLU 47 44 44 GLU GLU K . n A 1 48 ARG 48 45 45 ARG ARG K . n A 1 49 GLU 49 46 46 GLU GLU K . n A 1 50 TRP 50 47 47 TRP TRP K . n A 1 51 VAL 51 48 48 VAL VAL K . n A 1 52 ALA 52 49 49 ALA ALA K . n A 1 53 ALA 53 50 50 ALA ALA K . n A 1 54 ILE 54 51 51 ILE ILE K . n A 1 55 THR 55 52 52 THR THR K . n A 1 56 SER 56 53 53 SER SER K . n A 1 57 GLY 57 54 54 GLY GLY K . n A 1 58 GLY 58 55 55 GLY GLY K . n A 1 59 SER 59 56 56 SER SER K . n A 1 60 THR 60 57 57 THR THR K . n A 1 61 ASN 61 58 58 ASN ASN K . n A 1 62 TYR 62 59 59 TYR TYR K . n A 1 63 ALA 63 60 60 ALA ALA K . n A 1 64 ASP 64 61 61 ASP ASP K . n A 1 65 SER 65 62 62 SER SER K . n A 1 66 VAL 66 63 63 VAL VAL K . n A 1 67 LYS 67 64 64 LYS LYS K . n A 1 68 GLY 68 65 65 GLY GLY K . n A 1 69 ARG 69 66 66 ARG ARG K . n A 1 70 PHE 70 67 67 PHE PHE K . n A 1 71 THR 71 68 68 THR THR K . n A 1 72 ILE 72 69 69 ILE ILE K . n A 1 73 SER 73 70 70 SER SER K . n A 1 74 ARG 74 71 71 ARG ARG K . n A 1 75 ASP 75 72 72 ASP ASP K . n A 1 76 ASN 76 73 73 ASN ASN K . n A 1 77 ALA 77 74 74 ALA ALA K . n A 1 78 GLU 78 75 75 GLU GLU K . n A 1 79 ASN 79 76 76 ASN ASN K . n A 1 80 THR 80 77 77 THR THR K . n A 1 81 VAL 81 78 78 VAL VAL K . n A 1 82 TYR 82 79 79 TYR TYR K . n A 1 83 LEU 83 80 80 LEU LEU K . n A 1 84 GLN 84 81 81 GLN GLN K . n A 1 85 MET 85 82 82 MET MET K . n A 1 86 ASN 86 83 83 ASN ASN K . n A 1 87 SER 87 84 84 SER SER K . n A 1 88 LEU 88 85 85 LEU LEU K . n A 1 89 LYS 89 86 86 LYS LYS K . n A 1 90 PRO 90 87 87 PRO PRO K . n A 1 91 GLU 91 88 88 GLU GLU K . n A 1 92 ASP 92 89 89 ASP ASP K . n A 1 93 THR 93 90 90 THR THR K . n A 1 94 ALA 94 91 91 ALA ALA K . n A 1 95 VAL 95 92 92 VAL VAL K . n A 1 96 TYR 96 93 93 TYR TYR K . n A 1 97 TYR 97 94 94 TYR TYR K . n A 1 98 CYS 98 95 95 CYS CYS K . n A 1 99 GLU 99 96 96 GLU GLU K . n A 1 100 ALA 100 97 97 ALA ALA K . n A 1 101 TYR 101 98 98 TYR TYR K . n A 1 102 GLY 102 99 99 GLY GLY K . n A 1 103 THR 103 100 100 THR THR K . n A 1 104 TYR 104 101 101 TYR TYR K . n A 1 105 THR 105 102 102 THR THR K . n A 1 106 LEU 106 103 103 LEU LEU K . n A 1 107 ALA 107 104 104 ALA ALA K . n A 1 108 PRO 108 105 105 PRO PRO K . n A 1 109 THR 109 106 106 THR THR K . n A 1 110 GLY 110 107 107 GLY GLY K . n A 1 111 GLU 111 108 108 GLU GLU K . n A 1 112 GLY 112 109 109 GLY GLY K . n A 1 113 GLU 113 110 110 GLU GLU K . n A 1 114 TYR 114 111 111 TYR TYR K . n A 1 115 ASP 115 112 112 ASP ASP K . n A 1 116 ASP 116 113 113 ASP ASP K . n A 1 117 TYR 117 114 114 TYR TYR K . n A 1 118 TRP 118 115 115 TRP TRP K . n A 1 119 GLY 119 116 116 GLY GLY K . n A 1 120 GLN 120 117 117 GLN GLN K . n A 1 121 GLY 121 118 118 GLY GLY K . n A 1 122 THR 122 119 119 THR THR K . n A 1 123 GLN 123 120 120 GLN GLN K . n A 1 124 VAL 124 121 121 VAL VAL K . n A 1 125 MET 125 122 122 MET MET K . n A 1 126 VAL 126 123 123 VAL VAL K . n A 1 127 SER 127 124 124 SER SER K . n B 2 1 PRO 1 12 12 PRO PRO A . n B 2 2 GLU 2 13 13 GLU GLU A . n B 2 3 ARG 3 14 14 ARG ARG A . n B 2 4 ARG 4 15 15 ARG ARG A . n B 2 5 VAL 5 16 16 VAL VAL A . n B 2 6 ARG 6 17 17 ARG ARG A . n B 2 7 SER 7 18 18 SER SER A . n B 2 8 THR 8 19 19 THR THR A . n B 2 9 LEU 9 20 20 LEU LEU A . n B 2 10 LYS 10 21 21 LYS LYS A . n B 2 11 LYS 11 22 22 LYS LYS A . n B 2 12 VAL 12 23 23 VAL VAL A . n B 2 13 PHE 13 24 24 PHE PHE A . n B 2 14 GLY 14 25 25 GLY GLY A . n B 2 15 PHE 15 26 26 PHE PHE A . n B 2 16 ASP 16 27 27 ASP ASP A . n B 2 17 SER 17 28 28 SER SER A . n B 2 18 PHE 18 29 29 PHE PHE A . n B 2 19 LYS 19 30 30 LYS LYS A . n B 2 20 THR 20 31 31 THR THR A . n B 2 21 PRO 21 32 32 PRO PRO A . n B 2 22 LEU 22 33 33 LEU LEU A . n B 2 23 GLN 23 34 34 GLN GLN A . n B 2 24 GLU 24 35 35 GLU GLU A . n B 2 25 SER 25 36 36 SER SER A . n B 2 26 ALA 26 37 37 ALA ALA A . n B 2 27 THR 27 38 38 THR THR A . n B 2 28 MET 28 39 39 MET MET A . n B 2 29 ALA 29 40 40 ALA ALA A . n B 2 30 VAL 30 41 41 VAL VAL A . n B 2 31 VAL 31 42 42 VAL VAL A . n B 2 32 LYS 32 43 43 LYS LYS A . n B 2 33 GLY 33 44 44 GLY GLY A . n B 2 34 ASN 34 45 45 ASN ASN A . n B 2 35 LYS 35 46 46 LYS LYS A . n B 2 36 ASP 36 47 47 ASP ASP A . n B 2 37 VAL 37 48 48 VAL VAL A . n B 2 38 PHE 38 49 49 PHE PHE A . n B 2 39 VAL 39 50 50 VAL VAL A . n B 2 40 CYS 40 51 51 CYS CYS A . n B 2 41 MET 41 52 52 MET MET A . n B 2 42 PRO 42 53 53 PRO PRO A . n B 2 43 THR 43 54 54 THR THR A . n B 2 44 GLY 44 55 55 GLY GLY A . n B 2 45 ALA 45 56 56 ALA ALA A . n B 2 46 GLY 46 57 57 GLY GLY A . n B 2 47 LYS 47 58 58 LYS LYS A . n B 2 48 SER 48 59 59 SER SER A . n B 2 49 LEU 49 60 60 LEU LEU A . n B 2 50 CYS 50 61 61 CYS CYS A . n B 2 51 TYR 51 62 62 TYR TYR A . n B 2 52 GLN 52 63 63 GLN GLN A . n B 2 53 LEU 53 64 64 LEU LEU A . n B 2 54 PRO 54 65 65 PRO PRO A . n B 2 55 ALA 55 66 66 ALA ALA A . n B 2 56 LEU 56 67 67 LEU LEU A . n B 2 57 LEU 57 68 68 LEU LEU A . n B 2 58 ALA 58 69 69 ALA ALA A . n B 2 59 LYS 59 70 70 LYS LYS A . n B 2 60 GLY 60 71 71 GLY GLY A . n B 2 61 ILE 61 72 72 ILE ILE A . n B 2 62 THR 62 73 73 THR THR A . n B 2 63 ILE 63 74 74 ILE ILE A . n B 2 64 VAL 64 75 75 VAL VAL A . n B 2 65 VAL 65 76 76 VAL VAL A . n B 2 66 SER 66 77 77 SER SER A . n B 2 67 PRO 67 78 78 PRO PRO A . n B 2 68 LEU 68 79 79 LEU LEU A . n B 2 69 ILE 69 80 80 ILE ILE A . n B 2 70 ALA 70 81 81 ALA ALA A . n B 2 71 LEU 71 82 82 LEU LEU A . n B 2 72 ILE 72 83 83 ILE ILE A . n B 2 73 GLN 73 84 84 GLN GLN A . n B 2 74 ASP 74 85 85 ASP ASP A . n B 2 75 GLN 75 86 86 GLN GLN A . n B 2 76 VAL 76 87 87 VAL VAL A . n B 2 77 ASP 77 88 88 ASP ASP A . n B 2 78 HIS 78 89 89 HIS HIS A . n B 2 79 LEU 79 90 90 LEU LEU A . n B 2 80 LEU 80 91 91 LEU LEU A . n B 2 81 THR 81 92 92 THR THR A . n B 2 82 LEU 82 93 93 LEU LEU A . n B 2 83 LYS 83 94 94 LYS LYS A . n B 2 84 VAL 84 95 95 VAL VAL A . n B 2 85 ARG 85 96 96 ARG ARG A . n B 2 86 VAL 86 97 97 VAL VAL A . n B 2 87 SER 87 98 98 SER SER A . n B 2 88 SER 88 99 99 SER SER A . n B 2 89 LEU 89 100 100 LEU LEU A . n B 2 90 ASN 90 101 101 ASN ASN A . n B 2 91 SER 91 102 102 SER SER A . n B 2 92 LYS 92 103 103 LYS LYS A . n B 2 93 LEU 93 104 104 LEU LEU A . n B 2 94 SER 94 105 105 SER SER A . n B 2 95 ALA 95 106 106 ALA ALA A . n B 2 96 GLN 96 107 107 GLN GLN A . n B 2 97 GLU 97 108 108 GLU GLU A . n B 2 98 ARG 98 109 109 ARG ARG A . n B 2 99 LYS 99 110 110 LYS LYS A . n B 2 100 GLU 100 111 111 GLU GLU A . n B 2 101 LEU 101 112 112 LEU LEU A . n B 2 102 LEU 102 113 113 LEU LEU A . n B 2 103 ALA 103 114 114 ALA ALA A . n B 2 104 ASP 104 115 115 ASP ASP A . n B 2 105 LEU 105 116 116 LEU LEU A . n B 2 106 GLU 106 117 117 GLU GLU A . n B 2 107 ARG 107 118 118 ARG ARG A . n B 2 108 GLU 108 119 119 GLU GLU A . n B 2 109 LYS 109 120 120 LYS LYS A . n B 2 110 PRO 110 121 121 PRO PRO A . n B 2 111 GLN 111 122 122 GLN GLN A . n B 2 112 THR 112 123 123 THR THR A . n B 2 113 LYS 113 124 124 LYS LYS A . n B 2 114 ILE 114 125 125 ILE ILE A . n B 2 115 LEU 115 126 126 LEU LEU A . n B 2 116 TYR 116 127 127 TYR TYR A . n B 2 117 ILE 117 128 128 ILE ILE A . n B 2 118 THR 118 129 129 THR THR A . n B 2 119 PRO 119 130 130 PRO PRO A . n B 2 120 GLU 120 131 131 GLU GLU A . n B 2 121 MET 121 132 132 MET MET A . n B 2 122 ALA 122 133 133 ALA ALA A . n B 2 123 ALA 123 134 134 ALA ALA A . n B 2 124 SER 124 135 135 SER SER A . n B 2 125 SER 125 136 136 SER SER A . n B 2 126 SER 126 137 137 SER SER A . n B 2 127 PHE 127 138 138 PHE PHE A . n B 2 128 GLN 128 139 139 GLN GLN A . n B 2 129 PRO 129 140 140 PRO PRO A . n B 2 130 THR 130 141 141 THR THR A . n B 2 131 LEU 131 142 142 LEU LEU A . n B 2 132 ASN 132 143 143 ASN ASN A . n B 2 133 SER 133 144 144 SER SER A . n B 2 134 LEU 134 145 145 LEU LEU A . n B 2 135 VAL 135 146 146 VAL VAL A . n B 2 136 SER 136 147 147 SER SER A . n B 2 137 ARG 137 148 148 ARG ARG A . n B 2 138 HIS 138 149 149 HIS HIS A . n B 2 139 LEU 139 150 150 LEU LEU A . n B 2 140 LEU 140 151 151 LEU LEU A . n B 2 141 SER 141 152 152 SER SER A . n B 2 142 TYR 142 153 153 TYR TYR A . n B 2 143 LEU 143 154 154 LEU LEU A . n B 2 144 VAL 144 155 155 VAL VAL A . n B 2 145 VAL 145 156 156 VAL VAL A . n B 2 146 ASP 146 157 157 ASP ASP A . n B 2 147 GLU 147 158 158 GLU GLU A . n B 2 148 ALA 148 159 159 ALA ALA A . n B 2 149 HIS 149 160 160 HIS HIS A . n B 2 150 CYS 150 161 161 CYS CYS A . n B 2 151 VAL 151 162 162 VAL VAL A . n B 2 152 SER 152 163 163 SER SER A . n B 2 153 GLN 153 164 164 GLN GLN A . n B 2 154 TRP 154 165 165 TRP TRP A . n B 2 155 GLY 155 166 166 GLY GLY A . n B 2 156 HIS 156 167 167 HIS HIS A . n B 2 157 ASP 157 168 168 ASP ASP A . n B 2 158 PHE 158 169 169 PHE PHE A . n B 2 159 ARG 159 170 170 ARG ARG A . n B 2 160 PRO 160 171 171 PRO PRO A . n B 2 161 ASP 161 172 172 ASP ASP A . n B 2 162 TYR 162 173 173 TYR TYR A . n B 2 163 LEU 163 174 174 LEU LEU A . n B 2 164 ARG 164 175 175 ARG ARG A . n B 2 165 LEU 165 176 176 LEU LEU A . n B 2 166 GLY 166 177 177 GLY GLY A . n B 2 167 ALA 167 178 178 ALA ALA A . n B 2 168 LEU 168 179 179 LEU LEU A . n B 2 169 ARG 169 180 180 ARG ARG A . n B 2 170 SER 170 181 181 SER SER A . n B 2 171 ARG 171 182 182 ARG ARG A . n B 2 172 LEU 172 183 183 LEU LEU A . n B 2 173 GLY 173 184 184 GLY GLY A . n B 2 174 HIS 174 185 185 HIS HIS A . n B 2 175 ALA 175 186 186 ALA ALA A . n B 2 176 PRO 176 187 187 PRO PRO A . n B 2 177 CYS 177 188 188 CYS CYS A . n B 2 178 VAL 178 189 189 VAL VAL A . n B 2 179 ALA 179 190 190 ALA ALA A . n B 2 180 LEU 180 191 191 LEU LEU A . n B 2 181 THR 181 192 192 THR THR A . n B 2 182 ALA 182 193 193 ALA ALA A . n B 2 183 THR 183 194 194 THR THR A . n B 2 184 ALA 184 195 195 ALA ALA A . n B 2 185 THR 185 196 196 THR THR A . n B 2 186 PRO 186 197 197 PRO PRO A . n B 2 187 GLN 187 198 198 GLN GLN A . n B 2 188 VAL 188 199 199 VAL VAL A . n B 2 189 GLN 189 200 200 GLN GLN A . n B 2 190 GLU 190 201 201 GLU GLU A . n B 2 191 ASP 191 202 202 ASP ASP A . n B 2 192 VAL 192 203 203 VAL VAL A . n B 2 193 PHE 193 204 204 PHE PHE A . n B 2 194 ALA 194 205 205 ALA ALA A . n B 2 195 ALA 195 206 206 ALA ALA A . n B 2 196 LEU 196 207 207 LEU LEU A . n B 2 197 HIS 197 208 208 HIS HIS A . n B 2 198 LEU 198 209 209 LEU LEU A . n B 2 199 LYS 199 210 210 LYS LYS A . n B 2 200 LYS 200 211 211 LYS LYS A . n B 2 201 PRO 201 212 212 PRO PRO A . n B 2 202 VAL 202 213 213 VAL VAL A . n B 2 203 ALA 203 214 214 ALA ALA A . n B 2 204 ILE 204 215 215 ILE ILE A . n B 2 205 PHE 205 216 216 PHE PHE A . n B 2 206 LYS 206 217 217 LYS LYS A . n B 2 207 THR 207 218 218 THR THR A . n B 2 208 PRO 208 219 219 PRO PRO A . n B 2 209 CYS 209 220 220 CYS CYS A . n B 2 210 PHE 210 221 221 PHE PHE A . n B 2 211 ARG 211 222 222 ARG ARG A . n B 2 212 ALA 212 223 223 ALA ALA A . n B 2 213 ASN 213 224 224 ASN ASN A . n B 2 214 LEU 214 225 225 LEU LEU A . n B 2 215 PHE 215 226 226 PHE PHE A . n B 2 216 TYR 216 227 227 TYR TYR A . n B 2 217 ASP 217 228 228 ASP ASP A . n B 2 218 VAL 218 229 229 VAL VAL A . n B 2 219 GLN 219 230 230 GLN GLN A . n B 2 220 PHE 220 231 231 PHE PHE A . n B 2 221 LYS 221 232 232 LYS LYS A . n B 2 222 GLU 222 233 233 GLU GLU A . n B 2 223 LEU 223 234 234 LEU LEU A . n B 2 224 ILE 224 235 235 ILE ILE A . n B 2 225 SER 225 236 236 SER SER A . n B 2 226 ASP 226 237 237 ASP ASP A . n B 2 227 PRO 227 238 238 PRO PRO A . n B 2 228 TYR 228 239 239 TYR TYR A . n B 2 229 GLY 229 240 240 GLY GLY A . n B 2 230 ASN 230 241 241 ASN ASN A . n B 2 231 LEU 231 242 242 LEU LEU A . n B 2 232 LYS 232 243 243 LYS LYS A . n B 2 233 ASP 233 244 244 ASP ASP A . n B 2 234 PHE 234 245 245 PHE PHE A . n B 2 235 CYS 235 246 246 CYS CYS A . n B 2 236 LEU 236 247 247 LEU LEU A . n B 2 237 LYS 237 248 248 LYS LYS A . n B 2 238 ALA 238 249 249 ALA ALA A . n B 2 239 LEU 239 250 250 LEU LEU A . n B 2 240 GLY 240 251 251 GLY GLY A . n B 2 241 GLN 241 252 252 GLN GLN A . n B 2 242 GLU 242 253 253 GLU GLU A . n B 2 243 ALA 243 254 254 ALA ALA A . n B 2 244 ASP 244 255 255 ASP ASP A . n B 2 245 LYS 245 256 256 LYS LYS A . n B 2 246 GLY 246 257 257 GLY GLY A . n B 2 247 LEU 247 258 258 LEU LEU A . n B 2 248 SER 248 259 259 SER SER A . n B 2 249 GLY 249 260 260 GLY GLY A . n B 2 250 CYS 250 261 261 CYS CYS A . n B 2 251 GLY 251 262 262 GLY GLY A . n B 2 252 ILE 252 263 263 ILE ILE A . n B 2 253 VAL 253 264 264 VAL VAL A . n B 2 254 TYR 254 265 265 TYR TYR A . n B 2 255 CYS 255 266 266 CYS CYS A . n B 2 256 ARG 256 267 267 ARG ARG A . n B 2 257 THR 257 268 268 THR THR A . n B 2 258 ARG 258 269 269 ARG ARG A . n B 2 259 GLU 259 270 270 GLU GLU A . n B 2 260 ALA 260 271 271 ALA ALA A . n B 2 261 CYS 261 272 272 CYS CYS A . n B 2 262 GLU 262 273 273 GLU GLU A . n B 2 263 GLN 263 274 274 GLN GLN A . n B 2 264 LEU 264 275 275 LEU LEU A . n B 2 265 ALA 265 276 276 ALA ALA A . n B 2 266 ILE 266 277 277 ILE ILE A . n B 2 267 GLU 267 278 278 GLU GLU A . n B 2 268 LEU 268 279 279 LEU LEU A . n B 2 269 SER 269 280 280 SER SER A . n B 2 270 CYS 270 281 281 CYS CYS A . n B 2 271 ARG 271 282 282 ARG ARG A . n B 2 272 GLY 272 283 283 GLY GLY A . n B 2 273 VAL 273 284 284 VAL VAL A . n B 2 274 ASN 274 285 285 ASN ASN A . n B 2 275 ALA 275 286 286 ALA ALA A . n B 2 276 LYS 276 287 287 LYS LYS A . n B 2 277 ALA 277 288 288 ALA ALA A . n B 2 278 TYR 278 289 289 TYR TYR A . n B 2 279 HIS 279 290 290 HIS HIS A . n B 2 280 ALA 280 291 291 ALA ALA A . n B 2 281 GLY 281 292 292 GLY GLY A . n B 2 282 LEU 282 293 293 LEU LEU A . n B 2 283 LYS 283 294 294 LYS LYS A . n B 2 284 ALA 284 295 295 ALA ALA A . n B 2 285 SER 285 296 296 SER SER A . n B 2 286 GLU 286 297 297 GLU GLU A . n B 2 287 ARG 287 298 298 ARG ARG A . n B 2 288 THR 288 299 299 THR THR A . n B 2 289 LEU 289 300 300 LEU LEU A . n B 2 290 VAL 290 301 301 VAL VAL A . n B 2 291 GLN 291 302 302 GLN GLN A . n B 2 292 ASN 292 303 303 ASN ASN A . n B 2 293 ASP 293 304 304 ASP ASP A . n B 2 294 TRP 294 305 305 TRP TRP A . n B 2 295 MET 295 306 306 MET MET A . n B 2 296 GLU 296 307 307 GLU GLU A . n B 2 297 GLU 297 308 308 GLU GLU A . n B 2 298 LYS 298 309 309 LYS LYS A . n B 2 299 VAL 299 310 310 VAL VAL A . n B 2 300 PRO 300 311 311 PRO PRO A . n B 2 301 VAL 301 312 312 VAL VAL A . n B 2 302 ILE 302 313 313 ILE ILE A . n B 2 303 VAL 303 314 314 VAL VAL A . n B 2 304 ALA 304 315 315 ALA ALA A . n B 2 305 THR 305 316 316 THR THR A . n B 2 306 ILE 306 317 317 ILE ILE A . n B 2 307 SER 307 318 318 SER SER A . n B 2 308 PHE 308 319 319 PHE PHE A . n B 2 309 GLY 309 320 ? ? ? A . n B 2 310 MET 310 321 ? ? ? A . n B 2 311 GLY 311 322 ? ? ? A . n B 2 312 VAL 312 323 ? ? ? A . n B 2 313 ASP 313 324 324 ASP ASP A . n B 2 314 LYS 314 325 325 LYS LYS A . n B 2 315 ALA 315 326 326 ALA ALA A . n B 2 316 ASN 316 327 327 ASN ASN A . n B 2 317 VAL 317 328 328 VAL VAL A . n B 2 318 ARG 318 329 329 ARG ARG A . n B 2 319 PHE 319 330 330 PHE PHE A . n B 2 320 VAL 320 331 331 VAL VAL A . n B 2 321 ALA 321 332 332 ALA ALA A . n B 2 322 HIS 322 333 333 HIS HIS A . n B 2 323 TRP 323 334 334 TRP TRP A . n B 2 324 ASN 324 335 335 ASN ASN A . n B 2 325 ILE 325 336 336 ILE ILE A . n B 2 326 ALA 326 337 337 ALA ALA A . n B 2 327 LYS 327 338 338 LYS LYS A . n B 2 328 SER 328 339 339 SER SER A . n B 2 329 MET 329 340 340 MET MET A . n B 2 330 ALA 330 341 341 ALA ALA A . n B 2 331 GLY 331 342 342 GLY GLY A . n B 2 332 TYR 332 343 343 TYR TYR A . n B 2 333 TYR 333 344 344 TYR TYR A . n B 2 334 GLN 334 345 345 GLN GLN A . n B 2 335 GLU 335 346 346 GLU GLU A . n B 2 336 SER 336 347 347 SER SER A . n B 2 337 GLY 337 348 348 GLY GLY A . n B 2 338 ARG 338 349 349 ARG ARG A . n B 2 339 ALA 339 350 350 ALA ALA A . n B 2 340 GLY 340 351 351 GLY GLY A . n B 2 341 ARG 341 352 352 ARG ARG A . n B 2 342 ASP 342 353 353 ASP ASP A . n B 2 343 GLY 343 354 354 GLY GLY A . n B 2 344 LYS 344 355 355 LYS LYS A . n B 2 345 PRO 345 356 356 PRO PRO A . n B 2 346 SER 346 357 357 SER SER A . n B 2 347 TRP 347 358 358 TRP TRP A . n B 2 348 CYS 348 359 359 CYS CYS A . n B 2 349 ARG 349 360 360 ARG ARG A . n B 2 350 LEU 350 361 361 LEU LEU A . n B 2 351 TYR 351 362 362 TYR TYR A . n B 2 352 TYR 352 363 363 TYR TYR A . n B 2 353 SER 353 364 364 SER SER A . n B 2 354 ARG 354 365 365 ARG ARG A . n B 2 355 ASN 355 366 366 ASN ASN A . n B 2 356 ASP 356 367 367 ASP ASP A . n B 2 357 ARG 357 368 368 ARG ARG A . n B 2 358 ASP 358 369 369 ASP ASP A . n B 2 359 GLN 359 370 370 GLN GLN A . n B 2 360 VAL 360 371 371 VAL VAL A . n B 2 361 SER 361 372 372 SER SER A . n B 2 362 PHE 362 373 373 PHE PHE A . n B 2 363 LEU 363 374 374 LEU LEU A . n B 2 364 ILE 364 375 375 ILE ILE A . n B 2 365 ARG 365 376 376 ARG ARG A . n B 2 366 LYS 366 377 377 LYS LYS A . n B 2 367 GLU 367 378 378 GLU GLU A . n B 2 368 VAL 368 379 379 VAL VAL A . n B 2 369 ALA 369 380 380 ALA ALA A . n B 2 370 LYS 370 381 381 LYS LYS A . n B 2 371 LEU 371 382 382 LEU LEU A . n B 2 372 GLN 372 383 383 GLN GLN A . n B 2 373 GLU 373 384 384 GLU GLU A . n B 2 374 LYS 374 385 385 LYS LYS A . n B 2 375 ARG 375 386 386 ARG ARG A . n B 2 376 GLY 376 387 387 GLY GLY A . n B 2 377 ASN 377 388 388 ASN ASN A . n B 2 378 LYS 378 389 389 LYS LYS A . n B 2 379 ALA 379 390 390 ALA ALA A . n B 2 380 SER 380 391 391 SER SER A . n B 2 381 ASP 381 392 392 ASP ASP A . n B 2 382 LYS 382 393 393 LYS LYS A . n B 2 383 ALA 383 394 394 ALA ALA A . n B 2 384 THR 384 395 395 THR THR A . n B 2 385 ILE 385 396 396 ILE ILE A . n B 2 386 MET 386 397 397 MET MET A . n B 2 387 ALA 387 398 398 ALA ALA A . n B 2 388 PHE 388 399 399 PHE PHE A . n B 2 389 ASP 389 400 400 ASP ASP A . n B 2 390 ALA 390 401 401 ALA ALA A . n B 2 391 LEU 391 402 402 LEU LEU A . n B 2 392 VAL 392 403 403 VAL VAL A . n B 2 393 THR 393 404 404 THR THR A . n B 2 394 PHE 394 405 405 PHE PHE A . n B 2 395 CYS 395 406 406 CYS CYS A . n B 2 396 GLU 396 407 407 GLU GLU A . n B 2 397 GLU 397 408 408 GLU GLU A . n B 2 398 LEU 398 409 409 LEU LEU A . n B 2 399 GLY 399 410 410 GLY GLY A . n B 2 400 CYS 400 411 411 CYS CYS A . n B 2 401 ARG 401 412 412 ARG ARG A . n B 2 402 HIS 402 413 413 HIS HIS A . n B 2 403 ALA 403 414 414 ALA ALA A . n B 2 404 ALA 404 415 415 ALA ALA A . n B 2 405 ILE 405 416 416 ILE ILE A . n B 2 406 ALA 406 417 417 ALA ALA A . n B 2 407 LYS 407 418 418 LYS LYS A . n B 2 408 TYR 408 419 419 TYR TYR A . n B 2 409 PHE 409 420 420 PHE PHE A . n B 2 410 GLY 410 421 421 GLY GLY A . n B 2 411 ASP 411 422 422 ASP ASP A . n B 2 412 ALA 412 423 423 ALA ALA A . n B 2 413 LEU 413 424 424 LEU LEU A . n B 2 414 PRO 414 425 425 PRO PRO A . n B 2 415 ALA 415 426 426 ALA ALA A . n B 2 416 CYS 416 427 427 CYS CYS A . n B 2 417 ALA 417 428 428 ALA ALA A . n B 2 418 LYS 418 429 429 LYS LYS A . n B 2 419 GLY 419 430 430 GLY GLY A . n B 2 420 CYS 420 431 431 CYS CYS A . n B 2 421 ASP 421 432 432 ASP ASP A . n B 2 422 HIS 422 433 433 HIS HIS A . n B 2 423 CYS 423 434 434 CYS CYS A . n B 2 424 GLN 424 435 435 GLN GLN A . n B 2 425 ASN 425 436 436 ASN ASN A . n B 2 426 PRO 426 437 437 PRO PRO A . n B 2 427 THR 427 438 438 THR THR A . n B 2 428 ALA 428 439 439 ALA ALA A . n B 2 429 VAL 429 440 440 VAL VAL A . n B 2 430 ARG 430 441 441 ARG ARG A . n B 2 431 ARG 431 442 442 ARG ARG A . n B 2 432 ARG 432 443 443 ARG ARG A . n B 2 433 LEU 433 444 444 LEU LEU A . n B 2 434 GLU 434 445 445 GLU GLU A . n B 2 435 ALA 435 446 446 ALA ALA A . n B 2 436 LEU 436 447 447 LEU LEU A . n B 2 437 GLU 437 448 448 GLU GLU A . n B 2 438 ARG 438 449 449 ARG ARG A . n B 2 439 SER 439 450 450 SER SER A . n B 2 440 SER 440 451 451 SER SER A . n B 2 441 SER 441 452 ? ? ? A . n B 2 442 TRP 442 453 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 501 _pdbx_nonpoly_scheme.auth_seq_num -1 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 K ASP 61 ? CG ? A ASP 64 CG 2 1 Y 1 K ASP 61 ? OD1 ? A ASP 64 OD1 3 1 Y 1 K ASP 61 ? OD2 ? A ASP 64 OD2 4 1 Y 1 K ASN 73 ? CG ? A ASN 76 CG 5 1 Y 1 K ASN 73 ? OD1 ? A ASN 76 OD1 6 1 Y 1 K ASN 73 ? ND2 ? A ASN 76 ND2 7 1 Y 1 K ASP 112 ? CG ? A ASP 115 CG 8 1 Y 1 K ASP 112 ? OD1 ? A ASP 115 OD1 9 1 Y 1 K ASP 112 ? OD2 ? A ASP 115 OD2 10 1 Y 1 A ARG 118 ? CG ? B ARG 107 CG 11 1 Y 1 A ARG 118 ? CD ? B ARG 107 CD 12 1 Y 1 A ARG 118 ? NE ? B ARG 107 NE 13 1 Y 1 A ARG 118 ? CZ ? B ARG 107 CZ 14 1 Y 1 A ARG 118 ? NH1 ? B ARG 107 NH1 15 1 Y 1 A ARG 118 ? NH2 ? B ARG 107 NH2 16 1 Y 1 A GLU 253 ? CG ? B GLU 242 CG 17 1 Y 1 A GLU 253 ? CD ? B GLU 242 CD 18 1 Y 1 A GLU 253 ? OE1 ? B GLU 242 OE1 19 1 Y 1 A GLU 253 ? OE2 ? B GLU 242 OE2 20 1 Y 1 A ARG 269 ? CG ? B ARG 258 CG 21 1 Y 1 A ARG 269 ? CD ? B ARG 258 CD 22 1 Y 1 A ARG 269 ? NE ? B ARG 258 NE 23 1 Y 1 A ARG 269 ? CZ ? B ARG 258 CZ 24 1 Y 1 A ARG 269 ? NH1 ? B ARG 258 NH1 25 1 Y 1 A ARG 269 ? NH2 ? B ARG 258 NH2 26 1 Y 1 A GLU 270 ? CG ? B GLU 259 CG 27 1 Y 1 A GLU 270 ? CD ? B GLU 259 CD 28 1 Y 1 A GLU 270 ? OE1 ? B GLU 259 OE1 29 1 Y 1 A GLU 270 ? OE2 ? B GLU 259 OE2 30 1 Y 1 A GLU 297 ? CG ? B GLU 286 CG 31 1 Y 1 A GLU 297 ? CD ? B GLU 286 CD 32 1 Y 1 A GLU 297 ? OE1 ? B GLU 286 OE1 33 1 Y 1 A GLU 297 ? OE2 ? B GLU 286 OE2 34 1 Y 1 A ASP 324 ? CG ? B ASP 313 CG 35 1 Y 1 A ASP 324 ? OD1 ? B ASP 313 OD1 36 1 Y 1 A ASP 324 ? OD2 ? B ASP 313 OD2 37 1 Y 1 A LYS 338 ? CG ? B LYS 327 CG 38 1 Y 1 A LYS 338 ? CD ? B LYS 327 CD 39 1 Y 1 A LYS 338 ? CE ? B LYS 327 CE 40 1 Y 1 A LYS 338 ? NZ ? B LYS 327 NZ 41 1 Y 1 A ARG 365 ? CG ? B ARG 354 CG 42 1 Y 1 A ARG 365 ? CD ? B ARG 354 CD 43 1 Y 1 A ARG 365 ? NE ? B ARG 354 NE 44 1 Y 1 A ARG 365 ? CZ ? B ARG 354 CZ 45 1 Y 1 A ARG 365 ? NH1 ? B ARG 354 NH1 46 1 Y 1 A ARG 365 ? NH2 ? B ARG 354 NH2 47 1 Y 1 A ARG 368 ? CG ? B ARG 357 CG 48 1 Y 1 A ARG 368 ? CD ? B ARG 357 CD 49 1 Y 1 A ARG 368 ? NE ? B ARG 357 NE 50 1 Y 1 A ARG 368 ? CZ ? B ARG 357 CZ 51 1 Y 1 A ARG 368 ? NH1 ? B ARG 357 NH1 52 1 Y 1 A ARG 368 ? NH2 ? B ARG 357 NH2 53 1 Y 1 A PHE 373 ? CG ? B PHE 362 CG 54 1 Y 1 A PHE 373 ? CD1 ? B PHE 362 CD1 55 1 Y 1 A PHE 373 ? CD2 ? B PHE 362 CD2 56 1 Y 1 A PHE 373 ? CE1 ? B PHE 362 CE1 57 1 Y 1 A PHE 373 ? CE2 ? B PHE 362 CE2 58 1 Y 1 A PHE 373 ? CZ ? B PHE 362 CZ 59 1 Y 1 A ILE 375 ? CG1 ? B ILE 364 CG1 60 1 Y 1 A ILE 375 ? CG2 ? B ILE 364 CG2 61 1 Y 1 A ILE 375 ? CD1 ? B ILE 364 CD1 62 1 Y 1 A ARG 376 ? CG ? B ARG 365 CG 63 1 Y 1 A ARG 376 ? CD ? B ARG 365 CD 64 1 Y 1 A ARG 376 ? NE ? B ARG 365 NE 65 1 Y 1 A ARG 376 ? CZ ? B ARG 365 CZ 66 1 Y 1 A ARG 376 ? NH1 ? B ARG 365 NH1 67 1 Y 1 A ARG 376 ? NH2 ? B ARG 365 NH2 68 1 Y 1 A LYS 377 ? CG ? B LYS 366 CG 69 1 Y 1 A LYS 377 ? CD ? B LYS 366 CD 70 1 Y 1 A LYS 377 ? CE ? B LYS 366 CE 71 1 Y 1 A LYS 377 ? NZ ? B LYS 366 NZ 72 1 Y 1 A GLU 378 ? CG ? B GLU 367 CG 73 1 Y 1 A GLU 378 ? CD ? B GLU 367 CD 74 1 Y 1 A GLU 378 ? OE1 ? B GLU 367 OE1 75 1 Y 1 A GLU 378 ? OE2 ? B GLU 367 OE2 76 1 Y 1 A VAL 379 ? CG1 ? B VAL 368 CG1 77 1 Y 1 A VAL 379 ? CG2 ? B VAL 368 CG2 78 1 Y 1 A LYS 381 ? CG ? B LYS 370 CG 79 1 Y 1 A LYS 381 ? CD ? B LYS 370 CD 80 1 Y 1 A LYS 381 ? CE ? B LYS 370 CE 81 1 Y 1 A LYS 381 ? NZ ? B LYS 370 NZ 82 1 Y 1 A LEU 382 ? CG ? B LEU 371 CG 83 1 Y 1 A LEU 382 ? CD1 ? B LEU 371 CD1 84 1 Y 1 A LEU 382 ? CD2 ? B LEU 371 CD2 85 1 Y 1 A GLN 383 ? CG ? B GLN 372 CG 86 1 Y 1 A GLN 383 ? CD ? B GLN 372 CD 87 1 Y 1 A GLN 383 ? OE1 ? B GLN 372 OE1 88 1 Y 1 A GLN 383 ? NE2 ? B GLN 372 NE2 89 1 Y 1 A GLU 384 ? CG ? B GLU 373 CG 90 1 Y 1 A GLU 384 ? CD ? B GLU 373 CD 91 1 Y 1 A GLU 384 ? OE1 ? B GLU 373 OE1 92 1 Y 1 A GLU 384 ? OE2 ? B GLU 373 OE2 93 1 Y 1 A LYS 385 ? CG ? B LYS 374 CG 94 1 Y 1 A LYS 385 ? CD ? B LYS 374 CD 95 1 Y 1 A LYS 385 ? CE ? B LYS 374 CE 96 1 Y 1 A LYS 385 ? NZ ? B LYS 374 NZ 97 1 Y 1 A ARG 386 ? CG ? B ARG 375 CG 98 1 Y 1 A ARG 386 ? CD ? B ARG 375 CD 99 1 Y 1 A ARG 386 ? NE ? B ARG 375 NE 100 1 Y 1 A ARG 386 ? CZ ? B ARG 375 CZ 101 1 Y 1 A ARG 386 ? NH1 ? B ARG 375 NH1 102 1 Y 1 A ARG 386 ? NH2 ? B ARG 375 NH2 103 1 Y 1 A ASN 388 ? CG ? B ASN 377 CG 104 1 Y 1 A ASN 388 ? OD1 ? B ASN 377 OD1 105 1 Y 1 A ASN 388 ? ND2 ? B ASN 377 ND2 106 1 Y 1 A LYS 389 ? CG ? B LYS 378 CG 107 1 Y 1 A LYS 389 ? CD ? B LYS 378 CD 108 1 Y 1 A LYS 389 ? CE ? B LYS 378 CE 109 1 Y 1 A LYS 389 ? NZ ? B LYS 378 NZ 110 1 Y 1 A SER 391 ? OG ? B SER 380 OG 111 1 Y 1 A ASP 392 ? CG ? B ASP 381 CG 112 1 Y 1 A ASP 392 ? OD1 ? B ASP 381 OD1 113 1 Y 1 A ASP 392 ? OD2 ? B ASP 381 OD2 114 1 Y 1 A LYS 393 ? CG ? B LYS 382 CG 115 1 Y 1 A LYS 393 ? CD ? B LYS 382 CD 116 1 Y 1 A LYS 393 ? CE ? B LYS 382 CE 117 1 Y 1 A LYS 393 ? NZ ? B LYS 382 NZ 118 1 Y 1 A MET 397 ? CG ? B MET 386 CG 119 1 Y 1 A MET 397 ? SD ? B MET 386 SD 120 1 Y 1 A MET 397 ? CE ? B MET 386 CE 121 1 Y 1 A GLN 435 ? CG ? B GLN 424 CG 122 1 Y 1 A GLN 435 ? CD ? B GLN 424 CD 123 1 Y 1 A GLN 435 ? OE1 ? B GLN 424 OE1 124 1 Y 1 A GLN 435 ? NE2 ? B GLN 424 NE2 125 1 Y 1 A THR 438 ? OG1 ? B THR 427 OG1 126 1 Y 1 A THR 438 ? CG2 ? B THR 427 CG2 127 1 Y 1 A VAL 440 ? CG1 ? B VAL 429 CG1 128 1 Y 1 A VAL 440 ? CG2 ? B VAL 429 CG2 129 1 Y 1 A GLU 448 ? CG ? B GLU 437 CG 130 1 Y 1 A GLU 448 ? CD ? B GLU 437 CD 131 1 Y 1 A GLU 448 ? OE1 ? B GLU 437 OE1 132 1 Y 1 A GLU 448 ? OE2 ? B GLU 437 OE2 133 1 Y 1 A ARG 449 ? CG ? B ARG 438 CG 134 1 Y 1 A ARG 449 ? CD ? B ARG 438 CD 135 1 Y 1 A ARG 449 ? NE ? B ARG 438 NE 136 1 Y 1 A ARG 449 ? CZ ? B ARG 438 CZ 137 1 Y 1 A ARG 449 ? NH1 ? B ARG 438 NH1 138 1 Y 1 A ARG 449 ? NH2 ? B ARG 438 NH2 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8RLA _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RLA _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RLA _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8RLA _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 4295 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.510 ? 5824 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.110 ? 607 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.039 ? 660 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 750 ? f_plane_restr ? ? # _struct.entry_id 8RLA _struct.title 'RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - RECQL5 local refinement' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RLA _struct_keywords.text 'DNA helicase, Di-Gluebody, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8RLA 8RLA ? 1 ? 1 2 UNP RECQ5_HUMAN O94762 ? 2 ;PERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVSPLIALIQDQVDHLL TLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRP DYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDVQFKELISDPYGNLKDFCLKALG QEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFV AHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEELGC RHAAIAKYFGDALPACAKGCDHCQNPTAVRRRLEALERSSSW ; 12 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8RLA K 1 ? 127 ? 8RLA -2 ? 124 ? -2 124 2 2 8RLA A 1 ? 442 ? O94762 12 ? 453 ? 12 453 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 63 ? GLY A 68 ? ALA K 60 GLY K 65 1 ? 6 HELX_P HELX_P2 AA2 GLU B 2 ? VAL B 12 ? GLU A 13 VAL A 23 1 ? 11 HELX_P HELX_P3 AA3 THR B 20 ? GLY B 33 ? THR A 31 GLY A 44 1 ? 14 HELX_P HELX_P4 AA4 SER B 48 ? ALA B 58 ? SER A 59 ALA A 69 1 ? 11 HELX_P HELX_P5 AA5 LEU B 68 ? LEU B 82 ? LEU A 79 LEU A 93 1 ? 15 HELX_P HELX_P6 AA6 SER B 94 ? ARG B 107 ? SER A 105 ARG A 118 1 ? 14 HELX_P HELX_P7 AA7 THR B 118 ? ALA B 123 ? THR A 129 ALA A 134 1 ? 6 HELX_P HELX_P8 AA8 PHE B 127 ? HIS B 138 ? PHE A 138 HIS A 149 1 ? 12 HELX_P HELX_P9 AA9 GLU B 147 ? SER B 152 ? GLU A 158 SER A 163 5 ? 6 HELX_P HELX_P10 AB1 ARG B 159 ? ARG B 171 ? ARG A 170 ARG A 182 1 ? 13 HELX_P HELX_P11 AB2 THR B 185 ? LEU B 196 ? THR A 196 LEU A 207 1 ? 12 HELX_P HELX_P12 AB3 ASP B 226 ? GLY B 240 ? ASP A 237 GLY A 251 1 ? 15 HELX_P HELX_P13 AB4 THR B 257 ? GLY B 272 ? THR A 268 GLY A 283 1 ? 16 HELX_P HELX_P14 AB5 LYS B 283 ? GLU B 296 ? LYS A 294 GLU A 307 1 ? 14 HELX_P HELX_P15 AB6 SER B 328 ? ARG B 338 ? SER A 339 ARG A 349 1 ? 11 HELX_P HELX_P16 AB7 SER B 353 ? ARG B 375 ? SER A 364 ARG A 386 1 ? 23 HELX_P HELX_P17 AB8 ASN B 377 ? GLU B 397 ? ASN A 388 GLU A 408 1 ? 21 HELX_P HELX_P18 AB9 CYS B 400 ? GLY B 410 ? CYS A 411 GLY A 421 1 ? 11 HELX_P HELX_P19 AC1 CYS B 420 ? ASN B 425 ? CYS A 431 ASN A 436 1 ? 6 HELX_P HELX_P20 AC2 ASN B 425 ? SER B 440 ? ASN A 436 SER A 451 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 98 SG ? ? K CYS 22 K CYS 95 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf2 disulf ? ? B CYS 255 SG ? ? ? 1_555 B CYS 261 SG ? ? A CYS 266 A CYS 272 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc1 metalc ? ? B CYS 400 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 411 A ZN 501 1_555 ? ? ? ? ? ? ? 2.329 ? ? metalc2 metalc ? ? B CYS 416 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 427 A ZN 501 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc3 metalc ? ? B CYS 420 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 431 A ZN 501 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc4 metalc ? ? B CYS 423 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 434 A ZN 501 1_555 ? ? ? ? ? ? ? 2.330 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 400 ? A CYS 411 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 416 ? A CYS 427 ? 1_555 106.5 ? 2 SG ? B CYS 400 ? A CYS 411 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 420 ? A CYS 431 ? 1_555 105.8 ? 3 SG ? B CYS 416 ? A CYS 427 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 420 ? A CYS 431 ? 1_555 117.7 ? 4 SG ? B CYS 400 ? A CYS 411 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 423 ? A CYS 434 ? 1_555 113.9 ? 5 SG ? B CYS 416 ? A CYS 427 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 423 ? A CYS 434 ? 1_555 103.4 ? 6 SG ? B CYS 420 ? A CYS 431 ? 1_555 ZN ? C ZN . ? A ZN 501 ? 1_555 SG ? B CYS 423 ? A CYS 434 ? 1_555 109.9 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 25 ? CYS A 98 ? CYS K 22 ? 1_555 CYS K 95 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS B 255 ? CYS B 261 ? CYS A 266 ? 1_555 CYS A 272 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? AA3 ? 12 ? AA4 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? parallel AA3 7 8 ? parallel AA3 8 9 ? parallel AA3 9 10 ? parallel AA3 10 11 ? parallel AA3 11 12 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 7 ? ASN A 10 ? LEU K 4 ASN K 7 AA1 2 LEU A 21 ? ALA A 27 ? LEU K 18 ALA K 24 AA1 3 THR A 80 ? MET A 85 ? THR K 77 MET K 82 AA1 4 PHE A 70 ? ASP A 75 ? PHE K 67 ASP K 72 AA2 1 THR A 60 ? ASN A 61 ? THR K 57 ASN K 58 AA2 2 GLU A 49 ? THR A 55 ? GLU K 46 THR K 52 AA2 3 ILE A 31 ? GLN A 42 ? ILE K 28 GLN K 39 AA2 4 VAL A 95 ? CYS A 98 ? VAL K 92 CYS K 95 AA3 1 THR A 60 ? ASN A 61 ? THR K 57 ASN K 58 AA3 2 GLU A 49 ? THR A 55 ? GLU K 46 THR K 52 AA3 3 ILE A 31 ? GLN A 42 ? ILE K 28 GLN K 39 AA3 4 TYR A 101 ? LEU A 106 ? TYR K 98 LEU K 103 AA3 5 GLU A 111 ? GLU A 113 ? GLU K 108 GLU K 110 AA3 6 VAL B 202 ? LYS B 206 ? VAL A 213 LYS A 217 AA3 7 ASP B 36 ? CYS B 40 ? ASP A 47 CYS A 51 AA3 8 CYS B 177 ? THR B 181 ? CYS A 188 THR A 192 AA3 9 TYR B 142 ? VAL B 145 ? TYR A 153 VAL A 156 AA3 10 THR B 62 ? VAL B 65 ? THR A 73 VAL A 76 AA3 11 ILE B 114 ? TYR B 116 ? ILE A 125 TYR A 127 AA3 12 SER B 87 ? SER B 88 ? SER A 98 SER A 99 AA4 1 LEU B 214 ? PHE B 220 ? LEU A 225 PHE A 231 AA4 2 SER B 346 ? TYR B 352 ? SER A 357 TYR A 363 AA4 3 VAL B 317 ? HIS B 322 ? VAL A 328 HIS A 333 AA4 4 CYS B 250 ? TYR B 254 ? CYS A 261 TYR A 265 AA4 5 VAL B 301 ? THR B 305 ? VAL A 312 THR A 316 AA4 6 ALA B 275 ? LYS B 276 ? ALA A 286 LYS A 287 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 10 ? N ASN K 7 O SER A 24 ? O SER K 21 AA1 2 3 N LEU A 21 ? N LEU K 18 O MET A 85 ? O MET K 82 AA1 3 4 O TYR A 82 ? O TYR K 79 N SER A 73 ? N SER K 70 AA2 1 2 O ASN A 61 ? O ASN K 58 N ALA A 53 ? N ALA K 50 AA2 2 3 O GLU A 49 ? O GLU K 46 N ARG A 41 ? N ARG K 38 AA2 3 4 N GLN A 42 ? N GLN K 39 O VAL A 95 ? O VAL K 92 AA3 1 2 O ASN A 61 ? O ASN K 58 N ALA A 53 ? N ALA K 50 AA3 2 3 O GLU A 49 ? O GLU K 46 N ARG A 41 ? N ARG K 38 AA3 3 4 N PHE A 32 ? N PHE K 29 O TYR A 104 ? O TYR K 101 AA3 4 5 N THR A 105 ? N THR K 102 O GLU A 113 ? O GLU K 110 AA3 5 6 N GLY A 112 ? N GLY K 109 O ILE B 204 ? O ILE A 215 AA3 6 7 O ALA B 203 ? O ALA A 214 N ASP B 36 ? N ASP A 47 AA3 7 8 N VAL B 37 ? N VAL A 48 O ALA B 179 ? O ALA A 190 AA3 8 9 O VAL B 178 ? O VAL A 189 N VAL B 145 ? N VAL A 156 AA3 9 10 O TYR B 142 ? O TYR A 153 N ILE B 63 ? N ILE A 74 AA3 10 11 N VAL B 64 ? N VAL A 75 O LEU B 115 ? O LEU A 126 AA3 11 12 O ILE B 114 ? O ILE A 125 N SER B 87 ? N SER A 98 AA4 1 2 N PHE B 215 ? N PHE A 226 O CYS B 348 ? O CYS A 359 AA4 2 3 O ARG B 349 ? O ARG A 360 N VAL B 320 ? N VAL A 331 AA4 3 4 O PHE B 319 ? O PHE A 330 N ILE B 252 ? N ILE A 263 AA4 4 5 N GLY B 251 ? N GLY A 262 O ILE B 302 ? O ILE A 313 AA4 5 6 O VAL B 303 ? O VAL A 314 N LYS B 276 ? N LYS A 287 # _pdbx_entry_details.entry_id 8RLA _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH K TYR 111 ? ? OE1 A GLU 201 ? ? 1.57 2 1 HH12 A ARG 222 ? ? O A GLY 348 ? ? 1.58 3 1 OG1 K THR 106 ? ? OE1 K GLU 108 ? ? 2.01 4 1 NH1 A ARG 222 ? ? O A GLY 348 ? ? 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL K 48 ? ? -105.81 -61.52 2 1 THR A 316 ? ? 59.93 -129.60 3 1 SER A 357 ? ? -128.81 -169.42 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8RLA _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 111.1 _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol ? # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id 7ZMV _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 7ZMV _em_3d_fitting_list.initial_refinement_model_id 1 # _em_3d_reconstruction.entry_id 8RLA _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.03 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 359811 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Local refinement of RECQL5 part of the RECQL5:sfGFP heterodimer assembled by Di-Gluebody' ? ? ? 1,2 2 1 RECOMBINANT COMPLEX 'Gluebody G5-006' 'Gluebody G5-006' ? ? 1 3 1 RECOMBINANT COMPLEX 'ATP-dependent DNA helicase Q5' 'ATP-dependent DNA helicase Q5' ? ? 2 # _em_imaging.entry_id 8RLA _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-2/1 _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8RLA _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8RLA _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 8RLA _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 K SER -2 ? A SER 1 2 1 Y 1 K MET -1 ? A MET 2 3 1 Y 1 K ALA 0 ? A ALA 3 4 1 Y 1 A GLY 320 ? B GLY 309 5 1 Y 1 A MET 321 ? B MET 310 6 1 Y 1 A GLY 322 ? B GLY 311 7 1 Y 1 A VAL 323 ? B VAL 312 8 1 Y 1 A SER 452 ? B SER 441 9 1 Y 1 A TRP 453 ? B TRP 442 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 ZN ZN ZN N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_admin.current_status REL _em_admin.deposition_date 2024-01-02 _em_admin.deposition_site PDBE _em_admin.entry_id 8RLA _em_admin.last_update 2025-12-24 _em_admin.map_release_date 2025-01-15 _em_admin.title 'RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - RECQL5 local refinement' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM C8H18N2O4S 1 HEPES 1 150 mM NaCl 2 'sodium chloride' # _em_ctf_correction.details 'patch-ctf correction in cryoSPARC' _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.103 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 2 9844 'Lama glama' ? ? ? ? ? ? ? 3 3 9606 'Homo sapiens' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 2 562 'Escherichia coli' ? ? ? 3 3 562 'Escherichia coli' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 42 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 10102 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 1434365 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 4.0 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.0 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? 'UCSF ChimeraX' ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'MODEL REFINEMENT' ? 10 ? 1 ? Coot ? 'INITIAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 4.0 'FINAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC 4.0 CLASSIFICATION ? 13 1 ? ? ? ? RECONSTRUCTION ? 14 1 ? ? cryoSPARC 4.0 # _em_specimen.concentration 1.1 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 7ZMV # _atom_sites.entry_id 8RLA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S ZN # loop_ #