data_8RMH # _entry.id 8RMH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.400 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8RMH pdb_00008rmh 10.2210/pdb8rmh/pdb WWPDB D_1292135436 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8RMH _pdbx_database_status.recvd_initial_deposition_date 2024-01-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email james.hall@reading.ac.uk _pdbx_contact_author.name_first James _pdbx_contact_author.name_last Hall _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3716-4378 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Abdullrahman, A.' 1 0000-0002-4745-6852 'El Omari, K.' 2 0000-0003-3506-6045 'Paterson, N.' 3 0000-0003-4292-6971 'Orr, C.' 4 0000-0002-6137-8969 'Lambert, M.' 5 ? 'Cardin, C.J.' 6 0000-0002-2556-9995 'Sanchez-Weatherby, J.' 7 ? 'Hall, J.P.' 8 0000-0003-3716-4378 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of parallel G-quadruplex containing T-tetrads and TG-octaplet' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Abdullrahman, A.' 1 0000-0002-4745-6852 primary 'El Omari, K.' 2 0000-0003-3506-6045 primary 'Paterson, N.' 3 0000-0003-4292-6971 primary 'Orr, C.' 4 0000-0002-6137-8969 primary 'Lambert, M.' 5 ? primary 'Sandy, J.' 6 ? primary 'Mikolajek, H.' 7 0000-0003-0776-9974 primary 'Cardin, C.J.' 8 0000-0002-2556-9995 primary 'Sanchez-Weatherby, J.' 9 ? primary 'Hall, J.P.' 10 0000-0003-3716-4378 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*GP*GP*TP*GP*GP*T)-3') ; 2184.444 2 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 11 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 5 water nat water 18.015 60 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DG)(DG)(DT)(DG)(DG)(DT)' _entity_poly.pdbx_seq_one_letter_code_can TGGTGGT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'MAGNESIUM ION' MG 4 'SODIUM ION' NA 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DG n 1 4 DT n 1 5 DG n 1 6 DG n 1 7 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 7 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DT 4 4 4 DT DT A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n B 1 1 DT 1 1 1 DT DT B . n B 1 2 DG 2 2 2 DG DG B . n B 1 3 DG 3 3 3 DG DG B . n B 1 4 DT 4 4 4 DT DT B . n B 1 5 DG 5 5 5 DG DG B . n B 1 6 DG 6 6 6 DG DG B . n B 1 7 DT 7 7 7 DT DT B . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 K ? ? K ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? 3 NA ? ? NA ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K 1 101 1 K K A . D 2 K 1 102 2 K K A . E 2 K 1 103 3 K K A . F 2 K 1 104 4 K K A . G 2 K 1 105 5 K K A . H 2 K 1 106 6 K K A . I 2 K 1 107 10 K K A . J 3 MG 1 108 11 MG MG A . K 4 NA 1 109 12 NA NA A . L 4 NA 1 110 13 NA NA A . M 2 K 1 101 7 K K B . N 2 K 1 102 8 K K B . O 2 K 1 103 9 K K B . P 2 K 1 104 1 K K B . Q 5 HOH 1 201 52 HOH HOH A . Q 5 HOH 2 202 31 HOH HOH A . Q 5 HOH 3 203 15 HOH HOH A . Q 5 HOH 4 204 19 HOH HOH A . Q 5 HOH 5 205 14 HOH HOH A . Q 5 HOH 6 206 35 HOH HOH A . Q 5 HOH 7 207 50 HOH HOH A . Q 5 HOH 8 208 47 HOH HOH A . Q 5 HOH 9 209 17 HOH HOH A . Q 5 HOH 10 210 16 HOH HOH A . Q 5 HOH 11 211 46 HOH HOH A . Q 5 HOH 12 212 60 HOH HOH A . Q 5 HOH 13 213 8 HOH HOH A . Q 5 HOH 14 214 68 HOH HOH A . Q 5 HOH 15 215 58 HOH HOH A . Q 5 HOH 16 216 42 HOH HOH A . R 5 HOH 1 201 21 HOH HOH B . R 5 HOH 2 202 12 HOH HOH B . R 5 HOH 3 203 7 HOH HOH B . R 5 HOH 4 204 41 HOH HOH B . R 5 HOH 5 205 24 HOH HOH B . R 5 HOH 6 206 6 HOH HOH B . R 5 HOH 7 207 23 HOH HOH B . R 5 HOH 8 208 18 HOH HOH B . R 5 HOH 9 209 1 HOH HOH B . R 5 HOH 10 210 40 HOH HOH B . R 5 HOH 11 211 39 HOH HOH B . R 5 HOH 12 212 38 HOH HOH B . R 5 HOH 13 213 5 HOH HOH B . R 5 HOH 14 214 27 HOH HOH B . R 5 HOH 15 215 3 HOH HOH B . R 5 HOH 16 216 25 HOH HOH B . R 5 HOH 17 217 62 HOH HOH B . R 5 HOH 18 218 2 HOH HOH B . R 5 HOH 19 219 11 HOH HOH B . R 5 HOH 20 220 26 HOH HOH B . R 5 HOH 21 221 22 HOH HOH B . R 5 HOH 22 222 43 HOH HOH B . R 5 HOH 23 223 28 HOH HOH B . R 5 HOH 24 224 4 HOH HOH B . R 5 HOH 25 225 13 HOH HOH B . R 5 HOH 26 226 49 HOH HOH B . R 5 HOH 27 227 57 HOH HOH B . R 5 HOH 28 228 10 HOH HOH B . R 5 HOH 29 229 20 HOH HOH B . R 5 HOH 30 230 59 HOH HOH B . R 5 HOH 31 231 63 HOH HOH B . R 5 HOH 32 232 48 HOH HOH B . R 5 HOH 33 233 37 HOH HOH B . R 5 HOH 34 234 54 HOH HOH B . R 5 HOH 35 235 55 HOH HOH B . R 5 HOH 36 236 77 HOH HOH B . R 5 HOH 37 237 44 HOH HOH B . R 5 HOH 38 238 70 HOH HOH B . R 5 HOH 39 239 76 HOH HOH B . R 5 HOH 40 240 74 HOH HOH B . R 5 HOH 41 241 67 HOH HOH B . R 5 HOH 42 242 56 HOH HOH B . R 5 HOH 43 243 72 HOH HOH B . R 5 HOH 44 244 64 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? ACORN ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8RMH _cell.details ? _cell.formula_units_Z ? _cell.length_a 40.436 _cell.length_a_esd ? _cell.length_b 40.436 _cell.length_b_esd ? _cell.length_c 40.479 _cell.length_c_esd ? _cell.volume 66186.002 _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8RMH _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall 'P 4ab 2ab' _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8RMH _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;A solution containing DNA 1.8 mM, 0.02 M Sodium Cacodylate pH 5.5, 0.1 M NaCl, 0.01 mM MgCl2 was mixed 1:1 with a solution containing 0.2 M Potassium chloride, 0.05 M Sodium cacodylate trihydrate pH 5.9, 10% w/v Polyethylene glycol 4000 & 0.01 M Magnesium chloride hexahydrate. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 293.15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 12M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-09-18 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1271 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'DIAMOND BEAMLINE I23' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.1271 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline I23 _diffrn_source.pdbx_synchrotron_site Diamond # _reflns.B_iso_Wilson_estimate 10.52 _reflns.entry_id 8RMH _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.15 _reflns.d_resolution_low 40.48 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12480 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 126.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 0.353 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.15 _reflns_shell.d_res_low 1.17 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 589 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.567 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 21.33 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8RMH _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.15 _refine.ls_d_res_low 40.48 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12352 _refine.ls_number_reflns_R_free 1216 _refine.ls_number_reflns_R_work 21323 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.83 _refine.ls_percent_reflns_R_free 5.40 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1536 _refine.ls_R_factor_R_free 0.1900 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1514 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 25.0320 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1731 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.15 _refine_hist.d_res_low 40.48 _refine_hist.number_atoms_solvent 60 _refine_hist.number_atoms_total 364 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 290 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0112 ? 324 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.2766 ? 500 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0522 ? 54 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0164 ? 14 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 33.3676 ? 132 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.15 1.20 . . 109 2212 91.96 . . . . 0.3373 . . . . . . . . . . . 0.3302 'X-RAY DIFFRACTION' 1.20 1.25 . . 131 2390 99.41 . . . . 0.3027 . . . . . . . . . . . 0.3700 'X-RAY DIFFRACTION' 1.25 1.32 . . 120 2412 99.92 . . . . 0.2652 . . . . . . . . . . . 0.3377 'X-RAY DIFFRACTION' 1.32 1.40 . . 108 2430 100.00 . . . . 0.2124 . . . . . . . . . . . 0.2740 'X-RAY DIFFRACTION' 1.40 1.51 . . 136 2403 99.69 . . . . 0.1791 . . . . . . . . . . . 0.2147 'X-RAY DIFFRACTION' 1.51 1.66 . . 173 2303 99.84 . . . . 0.1474 . . . . . . . . . . . 0.1966 'X-RAY DIFFRACTION' 1.66 1.90 . . 153 2390 99.53 . . . . 0.1237 . . . . . . . . . . . 0.1450 'X-RAY DIFFRACTION' 1.90 2.39 . . 131 2412 100.00 . . . . 0.1145 . . . . . . . . . . . 0.1597 'X-RAY DIFFRACTION' 2.39 40.48 . . 155 2371 99.21 . . . . 0.1077 . . . . . . . . . . . 0.1576 # _struct.entry_id 8RMH _struct.title 'Crystal structure of parallel G-quadruplex containing T-tetrads and TG-octaplet' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8RMH _struct_keywords.text 'DNA, Quadruplex, T-tetrad, Octaplet, Parallel' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? Q N N 5 ? R N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8RMH _struct_ref.pdbx_db_accession 8RMH _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8RMH A 1 ? 7 ? 8RMH 1 ? 7 ? 1 7 2 1 8RMH B 1 ? 7 ? 8RMH 1 ? 7 ? 1 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 1 2 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 1 3 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1.0000000000 0.0000000000 0.0000000000 -40.4360000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 4_445 y-1/2,-x-1/2,z 0.0000000000 1.0000000000 0.0000000000 -20.2180000000 -1.0000000000 0.0000000000 0.0000000000 -20.2180000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DT 1 O4 ? ? ? 1_555 G K . K ? ? A DT 1 A K 105 1_555 ? ? ? ? ? ? ? 2.927 ? ? metalc2 metalc ? ? A DT 1 O4 ? ? ? 1_555 G K . K ? ? A DT 1 A K 105 4_445 ? ? ? ? ? ? ? 2.921 ? ? metalc3 metalc ? ? A DT 1 O4 ? ? ? 1_555 H K . K ? ? A DT 1 A K 106 1_555 ? ? ? ? ? ? ? 2.872 ? ? metalc4 metalc ? ? A DT 1 O4 ? ? ? 1_555 H K . K ? ? A DT 1 A K 106 3_455 ? ? ? ? ? ? ? 2.872 ? ? metalc5 metalc ? ? A DG 2 O6 ? ? ? 1_555 F K . K ? ? A DG 2 A K 104 1_555 ? ? ? ? ? ? ? 2.930 ? ? metalc6 metalc ? ? A DG 2 O6 ? ? ? 1_555 F K . K ? ? A DG 2 A K 104 3_455 ? ? ? ? ? ? ? 2.930 ? ? metalc7 metalc ? ? A DG 2 O6 ? ? ? 1_555 G K . K ? ? A DG 2 A K 105 1_555 ? ? ? ? ? ? ? 2.750 ? ? metalc8 metalc ? ? A DG 2 O6 ? ? ? 1_555 G K . K ? ? A DG 2 A K 105 2_455 ? ? ? ? ? ? ? 2.741 ? ? metalc9 metalc ? ? A DG 3 O6 ? ? ? 1_555 F K . K ? ? A DG 3 A K 104 1_555 ? ? ? ? ? ? ? 2.727 ? ? metalc10 metalc ? ? A DG 3 O6 ? ? ? 1_555 F K . K ? ? A DG 3 A K 104 3_455 ? ? ? ? ? ? ? 2.727 ? ? metalc11 metalc ? ? A DG 3 O6 ? ? ? 1_555 L NA . NA ? ? A DG 3 A NA 110 1_555 ? ? ? ? ? ? ? 3.190 ? ? metalc12 metalc ? ? A DG 3 O6 ? ? ? 1_555 L NA . NA ? ? A DG 3 A NA 110 3_455 ? ? ? ? ? ? ? 3.190 ? ? metalc13 metalc ? ? A DT 4 O4 ? ? ? 1_555 E K . K ? ? A DT 4 A K 103 1_555 ? ? ? ? ? ? ? 2.920 ? ? metalc14 metalc ? ? A DT 4 O4 ? ? ? 1_555 E K . K ? ? A DT 4 A K 103 3_455 ? ? ? ? ? ? ? 2.920 ? ? metalc15 metalc ? ? A DT 4 O4 ? ? ? 1_555 L NA . NA ? ? A DT 4 A NA 110 1_555 ? ? ? ? ? ? ? 3.101 ? ? metalc16 metalc ? ? A DT 4 O4 ? ? ? 1_555 L NA . NA ? ? A DT 4 A NA 110 3_455 ? ? ? ? ? ? ? 3.101 ? ? metalc17 metalc ? ? A DG 5 O6 ? ? ? 1_555 D K . K ? ? A DG 5 A K 102 1_555 ? ? ? ? ? ? ? 2.835 ? ? metalc18 metalc ? ? A DG 5 O6 ? ? ? 1_555 D K . K ? ? A DG 5 A K 102 3_455 ? ? ? ? ? ? ? 2.835 ? ? metalc19 metalc ? ? A DG 5 O6 ? ? ? 1_555 E K . K ? ? A DG 5 A K 103 1_555 ? ? ? ? ? ? ? 3.010 ? ? metalc20 metalc ? ? A DG 5 O6 ? ? ? 1_555 E K . K ? ? A DG 5 A K 103 3_455 ? ? ? ? ? ? ? 3.010 ? ? metalc21 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 101 1_555 ? ? ? ? ? ? ? 3.155 ? ? metalc22 metalc ? ? A DG 6 O6 ? ? ? 1_555 C K . K ? ? A DG 6 A K 101 3_455 ? ? ? ? ? ? ? 3.155 ? ? metalc23 metalc ? ? A DG 6 O6 ? ? ? 1_555 D K . K ? ? A DG 6 A K 102 1_555 ? ? ? ? ? ? ? 2.793 ? ? metalc24 metalc ? ? A DG 6 O6 ? ? ? 1_555 D K . K ? ? A DG 6 A K 102 3_455 ? ? ? ? ? ? ? 2.793 ? ? metalc25 metalc ? ? A DT 7 O4 ? ? ? 1_555 C K . K ? ? A DT 7 A K 101 1_555 ? ? ? ? ? ? ? 2.990 ? ? metalc26 metalc ? ? A DT 7 O4 ? ? ? 1_555 C K . K ? ? A DT 7 A K 101 3_455 ? ? ? ? ? ? ? 2.990 ? ? metalc27 metalc ? ? H K . K ? ? ? 1_555 B DG 6 O6 ? ? A K 106 B DG 6 1_555 ? ? ? ? ? ? ? 2.774 ? ? metalc28 metalc ? ? H K . K ? ? ? 3_455 B DG 6 O6 ? ? A K 106 B DG 6 1_555 ? ? ? ? ? ? ? 2.774 ? ? metalc29 metalc ? ? I K . K ? ? ? 3_456 B DT 1 O4 ? ? A K 107 B DT 1 1_555 ? ? ? ? ? ? ? 2.888 ? ? metalc30 metalc ? ? I K . K ? ? ? 3_456 B DG 2 O6 ? ? A K 107 B DG 2 1_555 ? ? ? ? ? ? ? 2.984 ? ? metalc31 metalc ? ? J MG . MG ? ? ? 1_555 Q HOH . O ? ? A MG 108 A HOH 213 1_555 ? ? ? ? ? ? ? 2.076 ? ? metalc32 metalc ? ? J MG . MG ? ? ? 1_555 Q HOH . O ? ? A MG 108 A HOH 213 7_555 ? ? ? ? ? ? ? 2.076 ? ? metalc33 metalc ? ? J MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 108 B HOH 203 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc34 metalc ? ? J MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 108 B HOH 203 7_555 ? ? ? ? ? ? ? 2.085 ? ? metalc35 metalc ? ? J MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 108 B HOH 233 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc36 metalc ? ? J MG . MG ? ? ? 1_555 R HOH . O ? ? A MG 108 B HOH 233 7_555 ? ? ? ? ? ? ? 2.136 ? ? metalc37 metalc ? ? Q HOH . O ? ? ? 7_555 P K . K ? ? A HOH 204 B K 104 1_555 ? ? ? ? ? ? ? 2.642 ? ? metalc38 metalc ? ? Q HOH . O ? ? ? 7_555 P K . K ? ? A HOH 209 B K 104 1_555 ? ? ? ? ? ? ? 3.462 ? ? metalc39 metalc ? ? B DG 2 O6 ? ? ? 1_555 O K . K ? ? B DG 2 B K 103 1_555 ? ? ? ? ? ? ? 2.766 ? ? metalc40 metalc ? ? B DG 2 O6 ? ? ? 1_555 O K . K ? ? B DG 2 B K 103 3_455 ? ? ? ? ? ? ? 2.766 ? ? metalc41 metalc ? ? B DG 3 O6 ? ? ? 1_555 N K . K ? ? B DG 3 B K 102 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc42 metalc ? ? B DG 3 O6 ? ? ? 1_555 N K . K ? ? B DG 3 B K 102 3_455 ? ? ? ? ? ? ? 2.856 ? ? metalc43 metalc ? ? B DG 3 O6 ? ? ? 1_555 O K . K ? ? B DG 3 B K 103 1_555 ? ? ? ? ? ? ? 2.827 ? ? metalc44 metalc ? ? B DG 3 O6 ? ? ? 1_555 O K . K ? ? B DG 3 B K 103 3_455 ? ? ? ? ? ? ? 2.827 ? ? metalc45 metalc ? ? B DG 5 O6 ? ? ? 1_555 M K . K ? ? B DG 5 B K 101 1_555 ? ? ? ? ? ? ? 2.823 ? ? metalc46 metalc ? ? B DG 5 O6 ? ? ? 1_555 M K . K ? ? B DG 5 B K 101 3_455 ? ? ? ? ? ? ? 2.823 ? ? metalc47 metalc ? ? B DG 5 O6 ? ? ? 1_555 N K . K ? ? B DG 5 B K 102 1_555 ? ? ? ? ? ? ? 2.829 ? ? metalc48 metalc ? ? B DG 5 O6 ? ? ? 1_555 N K . K ? ? B DG 5 B K 102 3_455 ? ? ? ? ? ? ? 2.829 ? ? metalc49 metalc ? ? B DG 6 O6 ? ? ? 1_555 M K . K ? ? B DG 6 B K 101 1_555 ? ? ? ? ? ? ? 2.845 ? ? metalc50 metalc ? ? B DG 6 O6 ? ? ? 1_555 M K . K ? ? B DG 6 B K 101 3_455 ? ? ? ? ? ? ? 2.845 ? ? metalc51 metalc ? ? B DG 6 OP1 ? ? ? 1_555 P K . K ? ? B DG 6 B K 104 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc52 metalc ? ? P K . K ? ? ? 1_555 R HOH . O ? ? B K 104 B HOH 214 4_445 ? ? ? ? ? ? ? 2.736 ? ? metalc53 metalc ? ? P K . K ? ? ? 1_555 R HOH . O ? ? B K 104 B HOH 217 4_445 ? ? ? ? ? ? ? 2.722 ? ? metalc54 metalc ? ? P K . K ? ? ? 1_555 R HOH . O B ? B K 104 B HOH 220 1_555 ? ? ? ? ? ? ? 3.370 ? ? metalc55 metalc ? ? P K . K ? ? ? 1_555 R HOH . O ? ? B K 104 B HOH 239 1_555 ? ? ? ? ? ? ? 2.613 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 A DT 1 O4 ? ? A DT 1 A DT 1 4_445 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 A DT 1 N3 ? ? A DT 1 A DT 1 3_455 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog3 hydrog ? ? A DG 2 N1 ? ? ? 1_555 A DG 2 O6 ? ? A DG 2 A DG 2 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 2 N7 ? ? A DG 2 A DG 2 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 2 N7 ? ? ? 1_555 A DG 2 N2 ? ? A DG 2 A DG 2 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 A DG 2 N1 ? ? A DG 2 A DG 2 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DT 7 O4 ? ? A DG 2 B DT 7 1_555 ? ? ? ? ? ? 'DG-DT MISPAIR' ? ? ? hydrog8 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 3 O6 ? ? A DG 3 A DG 3 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 3 N7 ? ? A DG 3 A DG 3 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 3 N2 ? ? A DG 3 A DG 3 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 3 N1 ? ? A DG 3 A DG 3 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DT 4 O4 ? ? A DT 4 A DT 4 4_445 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog13 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DT 4 N3 ? ? A DT 4 A DT 4 3_455 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog14 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 5 O6 ? ? A DG 5 A DG 5 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 5 N7 ? ? A DG 5 A DG 5 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 5 N2 ? ? A DG 5 A DG 5 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 5 N1 ? ? A DG 5 A DG 5 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 6 O6 ? ? A DG 6 A DG 6 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 6 N7 ? ? A DG 6 A DG 6 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 6 N2 ? ? A DG 6 A DG 6 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 6 N1 ? ? A DG 6 A DG 6 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DT 7 N3 ? ? ? 1_555 A DT 7 O4 ? ? A DT 7 A DT 7 4_445 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog23 hydrog ? ? A DT 7 O4 ? ? ? 1_555 A DT 7 N3 ? ? A DT 7 A DT 7 3_455 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog24 hydrog ? ? B DT 1 N3 ? ? ? 1_555 B DT 1 O4 ? ? B DT 1 B DT 1 4_445 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog25 hydrog ? ? B DT 1 O4 ? ? ? 1_555 B DT 1 N3 ? ? B DT 1 B DT 1 3_455 ? ? ? ? ? ? 'DT-DT MISPAIR' ? ? ? hydrog26 hydrog ? ? B DG 2 N1 ? ? ? 1_555 B DG 2 O6 ? ? B DG 2 B DG 2 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? B DG 2 N2 ? ? ? 1_555 B DG 2 N7 ? ? B DG 2 B DG 2 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? B DG 2 N7 ? ? ? 1_555 B DG 2 N2 ? ? B DG 2 B DG 2 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? B DG 2 O6 ? ? ? 1_555 B DG 2 N1 ? ? B DG 2 B DG 2 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog30 hydrog ? ? B DG 3 N1 ? ? ? 1_555 B DG 3 O6 ? ? B DG 3 B DG 3 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog31 hydrog ? ? B DG 3 N2 ? ? ? 1_555 B DG 3 N7 ? ? B DG 3 B DG 3 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog32 hydrog ? ? B DG 3 N7 ? ? ? 1_555 B DG 3 N2 ? ? B DG 3 B DG 3 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog33 hydrog ? ? B DG 3 O6 ? ? ? 1_555 B DG 3 N1 ? ? B DG 3 B DG 3 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog34 hydrog ? ? B DG 5 N1 ? ? ? 1_555 B DG 5 O6 ? ? B DG 5 B DG 5 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog35 hydrog ? ? B DG 5 N2 ? ? ? 1_555 B DG 5 N7 ? ? B DG 5 B DG 5 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog36 hydrog ? ? B DG 5 N7 ? ? ? 1_555 B DG 5 N2 ? ? B DG 5 B DG 5 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog37 hydrog ? ? B DG 5 O6 ? ? ? 1_555 B DG 5 N1 ? ? B DG 5 B DG 5 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog38 hydrog ? ? B DG 6 N1 ? ? ? 1_555 B DG 6 O6 ? ? B DG 6 B DG 6 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog39 hydrog ? ? B DG 6 N2 ? ? ? 1_555 B DG 6 N7 ? ? B DG 6 B DG 6 4_445 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog40 hydrog ? ? B DG 6 N7 ? ? ? 1_555 B DG 6 N2 ? ? B DG 6 B DG 6 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog41 hydrog ? ? B DG 6 O6 ? ? ? 1_555 B DG 6 N1 ? ? B DG 6 B DG 6 3_455 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? G K . ? A K 105 ? 1_555 O4 ? A DT 1 ? A DT 1 ? 1_555 0.0 ? 2 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? G K . ? A K 105 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 81.0 ? 3 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? G K . ? A K 105 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 81.0 ? 4 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? G K . ? A K 105 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 81.0 ? 5 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? G K . ? A K 105 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 81.0 ? 6 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? G K . ? A K 105 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 0.0 ? 7 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? H K . ? A K 106 ? 1_555 O4 ? A DT 1 ? A DT 1 ? 1_555 0.0 ? 8 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? H K . ? A K 106 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.9 ? 9 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? H K . ? A K 106 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.9 ? 10 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? H K . ? A K 106 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.9 ? 11 O4 ? A DT 1 ? A DT 1 ? 1_555 K ? H K . ? A K 106 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 77.9 ? 12 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? H K . ? A K 106 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 0.0 ? 13 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 2 ? A DG 2 ? 1_555 0.0 ? 14 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 73.7 ? 15 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 73.7 ? 16 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 73.7 ? 17 O6 ? A DG 2 ? A DG 2 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 73.7 ? 18 O6 ? A DG 3 ? A DG 3 ? 1_555 K ? F K . ? A K 104 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 0.0 ? 19 O6 ? A DG 3 ? A DG 3 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O6 ? A DG 3 ? A DG 3 ? 1_555 0.0 ? 20 O6 ? A DG 3 ? A DG 3 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 73.0 ? 21 O6 ? A DG 3 ? A DG 3 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 73.0 ? 22 O6 ? A DG 3 ? A DG 3 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 73.0 ? 23 O6 ? A DG 3 ? A DG 3 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 73.0 ? 24 O4 ? A DT 4 ? A DT 4 ? 1_555 NA ? L NA . ? A NA 110 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 0.0 ? 25 O4 ? A DT 4 ? A DT 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O4 ? A DT 4 ? A DT 4 ? 1_555 0.0 ? 26 O4 ? A DT 4 ? A DT 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 78.7 ? 27 O4 ? A DT 4 ? A DT 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 78.7 ? 28 O4 ? A DT 4 ? A DT 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 78.7 ? 29 O4 ? A DT 4 ? A DT 4 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 78.7 ? 30 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? E K . ? A K 103 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 0.0 ? 31 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 5 ? A DG 5 ? 1_555 0.0 ? 32 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 77.2 ? 33 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 77.2 ? 34 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 77.2 ? 35 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 77.2 ? 36 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 102 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 0.0 ? 37 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 0.0 ? 38 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O4 ? A DT 7 ? A DT 7 ? 1_555 69.0 ? 39 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O4 ? A DT 7 ? A DT 7 ? 1_555 69.0 ? 40 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O4 ? A DT 7 ? A DT 7 ? 1_555 69.0 ? 41 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? C K . ? A K 101 ? 1_555 O4 ? A DT 7 ? A DT 7 ? 1_555 69.0 ? 42 O4 ? A DT 7 ? A DT 7 ? 1_555 K ? C K . ? A K 101 ? 1_555 O4 ? A DT 7 ? A DT 7 ? 1_555 0.0 ? 43 O4 ? B DT 1 ? B DT 1 ? 1_555 K ? I K . ? A K 107 ? 3_456 O6 ? B DG 2 ? B DG 2 ? 1_555 86.3 ? 44 O ? Q HOH . ? A HOH 213 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? Q HOH . ? A HOH 213 ? 7_555 87.5 ? 45 O ? Q HOH . ? A HOH 213 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 203 ? 1_555 92.9 ? 46 O ? Q HOH . ? A HOH 213 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 203 ? 1_555 87.5 ? 47 O ? Q HOH . ? A HOH 213 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 203 ? 7_555 87.5 ? 48 O ? Q HOH . ? A HOH 213 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 203 ? 7_555 92.9 ? 49 O ? R HOH . ? B HOH 203 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 203 ? 7_555 179.5 ? 50 O ? Q HOH . ? A HOH 213 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 1_555 178.7 ? 51 O ? Q HOH . ? A HOH 213 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 1_555 92.0 ? 52 O ? R HOH . ? B HOH 203 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 1_555 85.8 ? 53 O ? R HOH . ? B HOH 203 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 1_555 93.8 ? 54 O ? Q HOH . ? A HOH 213 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 7_555 92.0 ? 55 O ? Q HOH . ? A HOH 213 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 7_555 178.7 ? 56 O ? R HOH . ? B HOH 203 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 7_555 93.8 ? 57 O ? R HOH . ? B HOH 203 ? 7_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 7_555 85.8 ? 58 O ? R HOH . ? B HOH 233 ? 1_555 MG ? J MG . ? A MG 108 ? 1_555 O ? R HOH . ? B HOH 233 ? 7_555 88.5 ? 59 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? Q HOH . ? A HOH 209 ? 7_555 72.3 ? 60 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 OP1 ? B DG 6 ? B DG 6 ? 1_555 78.8 ? 61 O ? Q HOH . ? A HOH 209 ? 7_555 K ? P K . ? B K 104 ? 1_555 OP1 ? B DG 6 ? B DG 6 ? 1_555 127.8 ? 62 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 214 ? 4_445 175.1 ? 63 O ? Q HOH . ? A HOH 209 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 214 ? 4_445 109.4 ? 64 OP1 ? B DG 6 ? B DG 6 ? 1_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 214 ? 4_445 96.7 ? 65 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 217 ? 4_445 110.4 ? 66 O ? Q HOH . ? A HOH 209 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 217 ? 4_445 117.5 ? 67 OP1 ? B DG 6 ? B DG 6 ? 1_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 217 ? 4_445 113.0 ? 68 O ? R HOH . ? B HOH 214 ? 4_445 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 217 ? 4_445 73.1 ? 69 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 O B R HOH . ? B HOH 220 ? 1_555 123.4 ? 70 O ? Q HOH . ? A HOH 209 ? 7_555 K ? P K . ? B K 104 ? 1_555 O B R HOH . ? B HOH 220 ? 1_555 114.6 ? 71 OP1 ? B DG 6 ? B DG 6 ? 1_555 K ? P K . ? B K 104 ? 1_555 O B R HOH . ? B HOH 220 ? 1_555 51.7 ? 72 O ? R HOH . ? B HOH 214 ? 4_445 K ? P K . ? B K 104 ? 1_555 O B R HOH . ? B HOH 220 ? 1_555 51.8 ? 73 O ? R HOH . ? B HOH 217 ? 4_445 K ? P K . ? B K 104 ? 1_555 O B R HOH . ? B HOH 220 ? 1_555 113.1 ? 74 O ? Q HOH . ? A HOH 204 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 119.2 ? 75 O ? Q HOH . ? A HOH 209 ? 7_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 50.8 ? 76 OP1 ? B DG 6 ? B DG 6 ? 1_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 151.4 ? 77 O ? R HOH . ? B HOH 214 ? 4_445 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 64.1 ? 78 O ? R HOH . ? B HOH 217 ? 4_445 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 82.9 ? 79 O B R HOH . ? B HOH 220 ? 1_555 K ? P K . ? B K 104 ? 1_555 O ? R HOH . ? B HOH 239 ? 1_555 100.7 ? 80 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 2 ? B DG 2 ? 1_555 0.0 ? 81 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 75.0 ? 82 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 75.0 ? 83 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 75.0 ? 84 O6 ? B DG 2 ? B DG 2 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 75.0 ? 85 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? O K . ? B K 103 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 0.0 ? 86 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 3 ? B DG 3 ? 1_555 0.0 ? 87 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 90.0 ? 88 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 90.0 ? 89 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 90.0 ? 90 O6 ? B DG 3 ? B DG 3 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 90.0 ? 91 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? N K . ? B K 102 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 0.0 ? 92 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 5 ? B DG 5 ? 1_555 0.0 ? 93 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 80.9 ? 94 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 80.9 ? 95 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 80.9 ? 96 O6 ? B DG 5 ? B DG 5 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 80.9 ? 97 O6 ? B DG 6 ? B DG 6 ? 1_555 K ? M K . ? B K 101 ? 1_555 O6 ? B DG 6 ? B DG 6 ? 1_555 0.0 ? # _pdbx_entry_details.entry_id 8RMH _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 OP2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 DT _pdbx_validate_symm_contact.auth_seq_id_1 7 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 235 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_454 _pdbx_validate_symm_contact.dist 2.10 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 110.60 108.30 2.30 0.30 N 2 1 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 110.38 108.30 2.08 0.30 N # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A K 101 ? C K . 2 1 A K 102 ? D K . 3 1 A K 103 ? E K . 4 1 A K 104 ? F K . 5 1 A K 105 ? G K . 6 1 A K 106 ? H K . 7 1 A K 107 ? I K . 8 1 A MG 108 ? J MG . 9 1 A NA 109 ? K NA . 10 1 A NA 110 ? L NA . 11 1 B K 101 ? M K . 12 1 B K 102 ? N K . 13 1 B K 103 ? O K . 14 1 A HOH 216 ? Q HOH . # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z 3 y+1/2,-x+1/2,z 4 x+1/2,-y+1/2,-z 5 -x+1/2,y+1/2,-z 6 -x,-y,z 7 y,x,-z 8 -y,-x,-z # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? B HOH 243 ? 6.11 . 2 1 O ? B HOH 244 ? 7.00 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DG OP3 O N N 1 DG P P N N 2 DG OP1 O N N 3 DG OP2 O N N 4 DG "O5'" O N N 5 DG "C5'" C N N 6 DG "C4'" C N R 7 DG "O4'" O N N 8 DG "C3'" C N S 9 DG "O3'" O N N 10 DG "C2'" C N N 11 DG "C1'" C N R 12 DG N9 N Y N 13 DG C8 C Y N 14 DG N7 N Y N 15 DG C5 C Y N 16 DG C6 C N N 17 DG O6 O N N 18 DG N1 N N N 19 DG C2 C N N 20 DG N2 N N N 21 DG N3 N N N 22 DG C4 C Y N 23 DG HOP3 H N N 24 DG HOP2 H N N 25 DG "H5'" H N N 26 DG "H5''" H N N 27 DG "H4'" H N N 28 DG "H3'" H N N 29 DG "HO3'" H N N 30 DG "H2'" H N N 31 DG "H2''" H N N 32 DG "H1'" H N N 33 DG H8 H N N 34 DG H1 H N N 35 DG H21 H N N 36 DG H22 H N N 37 DT OP3 O N N 38 DT P P N N 39 DT OP1 O N N 40 DT OP2 O N N 41 DT "O5'" O N N 42 DT "C5'" C N N 43 DT "C4'" C N R 44 DT "O4'" O N N 45 DT "C3'" C N S 46 DT "O3'" O N N 47 DT "C2'" C N N 48 DT "C1'" C N R 49 DT N1 N N N 50 DT C2 C N N 51 DT O2 O N N 52 DT N3 N N N 53 DT C4 C N N 54 DT O4 O N N 55 DT C5 C N N 56 DT C7 C N N 57 DT C6 C N N 58 DT HOP3 H N N 59 DT HOP2 H N N 60 DT "H5'" H N N 61 DT "H5''" H N N 62 DT "H4'" H N N 63 DT "H3'" H N N 64 DT "HO3'" H N N 65 DT "H2'" H N N 66 DT "H2''" H N N 67 DT "H1'" H N N 68 DT H3 H N N 69 DT H71 H N N 70 DT H72 H N N 71 DT H73 H N N 72 DT H6 H N N 73 HOH O O N N 74 HOH H1 H N N 75 HOH H2 H N N 76 K K K N N 77 MG MG MG N N 78 NA NA NA N N 79 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DG OP3 P sing N N 1 DG OP3 HOP3 sing N N 2 DG P OP1 doub N N 3 DG P OP2 sing N N 4 DG P "O5'" sing N N 5 DG OP2 HOP2 sing N N 6 DG "O5'" "C5'" sing N N 7 DG "C5'" "C4'" sing N N 8 DG "C5'" "H5'" sing N N 9 DG "C5'" "H5''" sing N N 10 DG "C4'" "O4'" sing N N 11 DG "C4'" "C3'" sing N N 12 DG "C4'" "H4'" sing N N 13 DG "O4'" "C1'" sing N N 14 DG "C3'" "O3'" sing N N 15 DG "C3'" "C2'" sing N N 16 DG "C3'" "H3'" sing N N 17 DG "O3'" "HO3'" sing N N 18 DG "C2'" "C1'" sing N N 19 DG "C2'" "H2'" sing N N 20 DG "C2'" "H2''" sing N N 21 DG "C1'" N9 sing N N 22 DG "C1'" "H1'" sing N N 23 DG N9 C8 sing Y N 24 DG N9 C4 sing Y N 25 DG C8 N7 doub Y N 26 DG C8 H8 sing N N 27 DG N7 C5 sing Y N 28 DG C5 C6 sing N N 29 DG C5 C4 doub Y N 30 DG C6 O6 doub N N 31 DG C6 N1 sing N N 32 DG N1 C2 sing N N 33 DG N1 H1 sing N N 34 DG C2 N2 sing N N 35 DG C2 N3 doub N N 36 DG N2 H21 sing N N 37 DG N2 H22 sing N N 38 DG N3 C4 sing N N 39 DT OP3 P sing N N 40 DT OP3 HOP3 sing N N 41 DT P OP1 doub N N 42 DT P OP2 sing N N 43 DT P "O5'" sing N N 44 DT OP2 HOP2 sing N N 45 DT "O5'" "C5'" sing N N 46 DT "C5'" "C4'" sing N N 47 DT "C5'" "H5'" sing N N 48 DT "C5'" "H5''" sing N N 49 DT "C4'" "O4'" sing N N 50 DT "C4'" "C3'" sing N N 51 DT "C4'" "H4'" sing N N 52 DT "O4'" "C1'" sing N N 53 DT "C3'" "O3'" sing N N 54 DT "C3'" "C2'" sing N N 55 DT "C3'" "H3'" sing N N 56 DT "O3'" "HO3'" sing N N 57 DT "C2'" "C1'" sing N N 58 DT "C2'" "H2'" sing N N 59 DT "C2'" "H2''" sing N N 60 DT "C1'" N1 sing N N 61 DT "C1'" "H1'" sing N N 62 DT N1 C2 sing N N 63 DT N1 C6 sing N N 64 DT C2 O2 doub N N 65 DT C2 N3 sing N N 66 DT N3 C4 sing N N 67 DT N3 H3 sing N N 68 DT C4 O4 doub N N 69 DT C4 C5 sing N N 70 DT C5 C7 sing N N 71 DT C5 C6 doub N N 72 DT C7 H71 sing N N 73 DT C7 H72 sing N N 74 DT C7 H73 sing N N 75 DT C6 H6 sing N N 76 HOH O H1 sing N N 77 HOH O H2 sing N N 78 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 8RMH 'double helix' 8RMH 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DT 7 1_555 3.504 1.180 -0.407 18.711 28.329 103.610 1 A_DG2:DT7_B A 2 ? B 7 ? ? 5 1 A DT 1 1_555 A DT 1 3_455 -0.186 -3.803 0.153 0.373 4.599 89.907 2 A_DT1:DT1_A A 1 ? A 1 ? ? ? 1 A DG 2 1_555 A DG 2 3_455 -1.502 -3.536 0.052 -2.706 2.846 89.933 3 A_DG2:DG2_A A 2 ? A 2 ? 6 3 1 A DG 3 1_555 A DG 3 3_455 -1.722 -3.491 -0.012 -5.117 2.142 89.866 4 A_DG3:DG3_A A 3 ? A 3 ? 6 3 1 A DT 4 1_555 A DT 4 3_455 -0.715 -3.337 -0.013 -1.467 -0.139 89.991 5 A_DT4:DT4_A A 4 ? A 4 ? ? ? 1 A DG 5 1_555 A DG 5 3_455 -1.587 -3.403 0.034 -6.410 4.121 89.746 6 A_DG5:DG5_A A 5 ? A 5 ? 6 3 1 A DG 6 1_555 A DG 6 3_455 -1.561 -3.462 0.088 -4.853 5.080 89.784 7 A_DG6:DG6_A A 6 ? A 6 ? 6 3 1 A DT 7 1_555 A DT 7 3_455 -0.816 -3.137 0.266 0.753 9.453 89.606 8 A_DT7:DT7_A A 7 ? A 7 ? ? ? 1 A DT 1 1_555 A DT 1 4_445 0.186 3.803 -0.153 -0.373 -4.599 -89.907 9 A_DT1:DT1_A A 1 ? A 1 ? ? ? 1 A DG 2 1_555 A DG 2 4_445 1.502 3.536 -0.052 2.706 -2.846 -89.933 10 A_DG2:DG2_A A 2 ? A 2 ? 6 3 1 A DG 3 1_555 A DG 3 4_445 1.722 3.491 0.012 5.117 -2.142 -89.866 11 A_DG3:DG3_A A 3 ? A 3 ? 6 3 1 A DT 4 1_555 A DT 4 4_445 0.715 3.337 0.013 1.467 0.139 -89.991 12 A_DT4:DT4_A A 4 ? A 4 ? ? ? 1 A DG 5 1_555 A DG 5 4_445 1.587 3.403 -0.034 6.410 -4.121 -89.746 13 A_DG5:DG5_A A 5 ? A 5 ? 6 3 1 A DG 6 1_555 A DG 6 4_445 1.561 3.462 -0.088 4.853 -5.080 -89.784 14 A_DG6:DG6_A A 6 ? A 6 ? 6 3 1 A DT 7 1_555 A DT 7 4_445 0.816 3.137 -0.266 -0.753 -9.453 -89.606 15 A_DT7:DT7_A A 7 ? A 7 ? ? ? 1 B DT 1 1_555 B DT 1 3_455 -0.616 -2.994 0.097 0.285 3.660 89.941 16 B_DT1:DT1_B B 1 ? B 1 ? ? ? 1 B DG 2 1_555 B DG 2 3_455 -1.519 -3.537 -0.027 -3.693 0.700 89.938 17 B_DG2:DG2_B B 2 ? B 2 ? 6 3 1 B DG 3 1_555 B DG 3 3_455 -1.581 -3.533 0.104 -4.673 5.453 89.774 18 B_DG3:DG3_B B 3 ? B 3 ? 6 3 1 B DG 5 1_555 B DG 5 3_455 -1.526 -3.554 0.066 -2.570 3.243 89.925 19 B_DG5:DG5_B B 5 ? B 5 ? 6 3 1 B DG 6 1_555 B DG 6 3_455 -1.500 -3.573 0.080 3.052 1.282 89.952 20 B_DG6:DG6_B B 6 ? B 6 ? 6 3 1 B DT 1 1_555 B DT 1 4_445 0.616 2.994 -0.097 -0.285 -3.660 -89.941 21 B_DT1:DT1_B B 1 ? B 1 ? ? ? 1 B DG 2 1_555 B DG 2 4_445 1.519 3.537 0.027 3.693 -0.700 -89.938 22 B_DG2:DG2_B B 2 ? B 2 ? 6 3 1 B DG 3 1_555 B DG 3 4_445 1.581 3.533 -0.104 4.673 -5.453 -89.774 23 B_DG3:DG3_B B 3 ? B 3 ? 6 3 1 B DG 5 1_555 B DG 5 4_445 1.526 3.554 -0.066 2.570 -3.243 -89.925 24 B_DG5:DG5_B B 5 ? B 5 ? 6 3 1 B DG 6 1_555 B DG 6 4_445 1.500 3.573 -0.080 -3.052 -1.282 -89.952 25 B_DG6:DG6_B B 6 ? B 6 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 A DT 1 3_455 A DG 2 1_555 A DG 2 3_455 -0.154 -0.394 3.495 -1.190 2.598 35.307 -1.055 0.066 3.461 4.275 1.959 35.418 1 AA_DT1DG2:DG2DT1_AA A 1 ? A 1 ? A 2 ? A 2 ? 1 A DG 2 1_555 A DG 2 3_455 A DG 3 1_555 A DG 3 3_455 -0.452 -0.631 3.293 -1.234 1.744 26.297 -1.850 0.660 3.262 3.826 2.707 26.382 2 AA_DG2DG3:DG3DG2_AA A 2 ? A 2 ? A 3 ? A 3 ? 1 A DG 3 1_555 A DG 3 3_455 A DT 4 1_555 A DT 4 3_455 -0.285 -1.194 3.623 -1.834 -1.565 25.259 -2.212 0.055 3.700 -3.567 4.183 25.372 3 AA_DG3DT4:DT4DG3_AA A 3 ? A 3 ? A 4 ? A 4 ? 1 A DT 4 1_555 A DT 4 3_455 A DG 5 1_555 A DG 5 3_455 -0.497 -0.556 3.185 0.863 2.961 34.647 -1.365 0.958 3.115 4.959 -1.445 34.780 4 AA_DT4DG5:DG5DT4_AA A 4 ? A 4 ? A 5 ? A 5 ? 1 A DG 5 1_555 A DG 5 3_455 A DG 6 1_555 A DG 6 3_455 -0.544 -0.647 3.327 -0.796 0.272 25.874 -1.521 0.990 3.335 0.606 1.778 25.887 5 AA_DG5DG6:DG6DG5_AA A 5 ? A 5 ? A 6 ? A 6 ? 1 A DG 6 1_555 A DG 6 3_455 A DT 7 1_555 A DT 7 3_455 -0.235 -1.024 3.189 1.571 -0.766 30.930 -1.773 0.735 3.198 -1.435 -2.944 30.978 6 AA_DG6DT7:DT7DG6_AA A 6 ? A 6 ? A 7 ? A 7 ? 1 A DT 1 1_555 A DT 1 4_445 A DG 2 1_555 A DG 2 4_445 -0.154 -0.394 3.495 -1.190 2.598 35.307 -1.055 0.066 3.461 4.275 1.959 35.418 7 AA_DT1DG2:DG2DT1_AA A 1 ? A 1 ? A 2 ? A 2 ? 1 A DG 2 1_555 A DG 2 4_445 A DG 3 1_555 A DG 3 4_445 -0.452 -0.631 3.293 -1.234 1.744 26.297 -1.850 0.660 3.262 3.826 2.707 26.382 8 AA_DG2DG3:DG3DG2_AA A 2 ? A 2 ? A 3 ? A 3 ? 1 A DG 3 1_555 A DG 3 4_445 A DT 4 1_555 A DT 4 4_445 -0.285 -1.194 3.623 -1.834 -1.565 25.259 -2.212 0.055 3.700 -3.567 4.183 25.372 9 AA_DG3DT4:DT4DG3_AA A 3 ? A 3 ? A 4 ? A 4 ? 1 A DT 4 1_555 A DT 4 4_445 A DG 5 1_555 A DG 5 4_445 -0.497 -0.556 3.185 0.863 2.961 34.647 -1.365 0.958 3.115 4.959 -1.445 34.780 10 AA_DT4DG5:DG5DT4_AA A 4 ? A 4 ? A 5 ? A 5 ? 1 A DG 5 1_555 A DG 5 4_445 A DG 6 1_555 A DG 6 4_445 -0.544 -0.647 3.327 -0.796 0.272 25.874 -1.521 0.990 3.335 0.606 1.778 25.887 11 AA_DG5DG6:DG6DG5_AA A 5 ? A 5 ? A 6 ? A 6 ? 1 A DG 6 1_555 A DG 6 4_445 A DT 7 1_555 A DT 7 4_445 -0.235 -1.024 3.189 1.571 -0.766 30.930 -1.773 0.735 3.198 -1.435 -2.944 30.978 12 AA_DG6DT7:DT7DG6_AA A 6 ? A 6 ? A 7 ? A 7 ? 1 B DT 1 1_555 B DT 1 3_455 B DG 2 1_555 B DG 2 3_455 -0.622 -0.532 3.449 -1.934 2.564 35.829 -1.246 0.716 3.432 4.158 3.136 35.968 13 BB_DT1DG2:DG2DT1_BB B 1 ? B 1 ? B 2 ? B 2 ? 1 B DG 2 1_555 B DG 2 3_455 B DG 3 1_555 B DG 3 3_455 -0.391 -0.487 3.265 1.636 1.010 19.559 -1.908 1.928 3.193 2.963 -4.801 19.652 14 BB_DG2DG3:DG3DG2_BB B 2 ? B 2 ? B 3 ? B 3 ? 1 B DG 3 1_555 B DG 3 3_455 B DG 5 1_555 B DG 5 3_455 -0.795 -1.501 3.476 -2.634 1.035 53.915 -1.722 0.703 3.481 1.140 2.903 53.984 15 BB_DG3DG5:DG5DG3_BB B 3 ? B 3 ? B 5 ? B 5 ? 1 B DG 5 1_555 B DG 5 3_455 B DG 6 1_555 B DG 6 3_455 -0.422 -0.933 3.414 -0.873 -2.056 32.934 -1.275 0.587 3.474 -3.621 1.537 33.007 16 BB_DG5DG6:DG6DG5_BB B 5 ? B 5 ? B 6 ? B 6 ? 1 B DT 1 1_555 B DT 1 4_445 B DG 2 1_555 B DG 2 4_445 -0.622 -0.532 3.449 -1.934 2.564 35.829 -1.246 0.716 3.432 4.158 3.136 35.968 17 BB_DT1DG2:DG2DT1_BB B 1 ? B 1 ? B 2 ? B 2 ? 1 B DG 2 1_555 B DG 2 4_445 B DG 3 1_555 B DG 3 4_445 -0.391 -0.487 3.265 1.636 1.010 19.559 -1.908 1.928 3.193 2.963 -4.801 19.652 18 BB_DG2DG3:DG3DG2_BB B 2 ? B 2 ? B 3 ? B 3 ? 1 B DG 3 1_555 B DG 3 4_445 B DG 5 1_555 B DG 5 4_445 -0.795 -1.501 3.476 -2.634 1.035 53.915 -1.722 0.703 3.481 1.140 2.903 53.984 19 BB_DG3DG5:DG5DG3_BB B 3 ? B 3 ? B 5 ? B 5 ? 1 B DG 5 1_555 B DG 5 4_445 B DG 6 1_555 B DG 6 4_445 -0.422 -0.933 3.414 -0.873 -2.056 32.934 -1.275 0.587 3.474 -3.621 1.537 33.007 20 BB_DG5DG6:DG6DG5_BB B 5 ? B 5 ? B 6 ? B 6 ? # _pdbx_audit_support.funding_organization 'H2020 Marie Curie Actions of the European Commission' _pdbx_audit_support.country 'European Union' _pdbx_audit_support.grant_number H2020-MSCA-INT-2019-861 _pdbx_audit_support.ordinal 1 # _space_group.name_H-M_alt 'P 4 21 2' _space_group.name_Hall 'P 4ab 2ab' _space_group.IT_number 90 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 8RMH _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.024730 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024730 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024704 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 8.66788 8.58341 1.68052 ? 12.31593 0.56275 110.00227 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 6.63511 3.01293 1.30238 ? 5.54423 0.54580 90.85902 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #