HEADER NUCLEAR PROTEIN 11-JAN-24 8RO8 TITLE HUMAN COHESIN SMC1A-HD(LONGCC-EQ)/RAD21-C COMPLEX - APO CLOSED P-LOOP TITLE 2 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 1A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SMC PROTEIN 1A,SMC-1-ALPHA,SMC-1A,SB1.8; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: 64-KDA C-TERMINAL PRODUCT; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: 64-KDA CARBOXY-TERMINAL PRODUCT,65-KDA CARBOXY-TERMINAL COMPND 11 PRODUCT; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMC1A, DXS423E, KIAA0178, SB1.8, SMC1, SMC1L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RAD21, HR21, KIAA0078, NXP1, SCC1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS 3D GENOME ORGANIZATION, CHROMATIN, COHESIN, ATPASE ACTIVITY, ATPASE KEYWDS 2 CYCLE, NUCLEAR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.VITORIA GOMES,C.ROMIER REVDAT 1 11-SEP-24 8RO8 0 JRNL AUTH M.VITORIA GOMES,C.ROMIER JRNL TITL THE COHESIN ATPASE CYCLE IS MEDIATED BY SPECIFIC JRNL TITL 2 CONFORMATIONAL DYNAMICS AND INTERFACE PLASTICITY OF SMC1A JRNL TITL 3 AND SMC3 ATPASE DOMAINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.300 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 42461 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 4099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.0618 - 5.8393 0.99 2726 146 0.1563 0.1811 REMARK 3 2 5.8393 - 4.6365 1.00 2712 171 0.1504 0.1645 REMARK 3 3 4.6365 - 4.0508 1.00 2725 152 0.1360 0.1830 REMARK 3 4 4.0508 - 3.6807 1.00 2737 113 0.1581 0.1948 REMARK 3 5 3.6807 - 3.4170 1.00 2750 126 0.1810 0.2274 REMARK 3 6 3.4170 - 3.2156 1.00 2740 164 0.1881 0.2360 REMARK 3 7 3.2156 - 3.0546 1.00 2645 183 0.2063 0.2160 REMARK 3 8 3.0546 - 2.9216 1.00 2737 148 0.2095 0.2700 REMARK 3 9 2.9216 - 2.8092 1.00 2743 148 0.2216 0.2860 REMARK 3 10 2.8092 - 2.7123 1.00 2794 108 0.2054 0.2428 REMARK 3 11 2.7123 - 2.6275 1.00 2698 137 0.2183 0.3247 REMARK 3 12 2.6275 - 2.5524 1.00 2724 145 0.2194 0.2626 REMARK 3 13 2.5524 - 2.4852 1.00 2716 136 0.2287 0.2423 REMARK 3 14 2.4852 - 2.4246 1.00 2778 139 0.2279 0.2582 REMARK 3 15 2.4246 - 2.3694 1.00 2725 130 0.2284 0.2846 REMARK 3 16 2.3694 - 2.3190 0.99 2719 106 0.2334 0.2853 REMARK 3 17 2.3190 - 2.2726 1.00 2774 126 0.2441 0.2660 REMARK 3 18 2.2726 - 2.2297 1.00 2714 144 0.2593 0.2840 REMARK 3 19 2.2297 - 2.1899 1.00 2816 117 0.2566 0.3274 REMARK 3 20 2.1899 - 2.1528 1.00 2667 139 0.2726 0.3326 REMARK 3 21 2.1528 - 2.1181 1.00 2720 177 0.2801 0.3064 REMARK 3 22 2.1181 - 2.0855 0.99 2698 156 0.2950 0.4066 REMARK 3 23 2.0855 - 2.0548 0.99 2710 138 0.3171 0.3549 REMARK 3 24 2.0548 - 2.0259 1.00 2773 148 0.3286 0.3701 REMARK 3 25 2.0259 - 1.9985 0.99 2644 161 0.3300 0.3222 REMARK 3 26 1.9985 - 1.9725 1.00 2725 134 0.3553 0.3946 REMARK 3 27 1.9725 - 1.9479 1.00 2823 156 0.3676 0.3607 REMARK 3 28 1.9479 - 1.9244 1.00 2679 116 0.3646 0.4601 REMARK 3 29 1.9244 - 1.9020 0.91 2542 135 0.3875 0.4323 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3354 REMARK 3 ANGLE : 0.771 4524 REMARK 3 CHIRALITY : 0.051 498 REMARK 3 PLANARITY : 0.005 591 REMARK 3 DIHEDRAL : 14.565 2066 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): -24.6828 -19.7406 10.8896 REMARK 3 T TENSOR REMARK 3 T11: 0.4037 T22: 0.4072 REMARK 3 T33: 0.4050 T12: -0.0429 REMARK 3 T13: -0.0130 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 0.2057 L22: 0.5245 REMARK 3 L33: 0.9603 L12: -0.4632 REMARK 3 L13: 0.0177 L23: 0.5153 REMARK 3 S TENSOR REMARK 3 S11: -0.0982 S12: 0.0033 S13: 0.0957 REMARK 3 S21: 0.1167 S22: 0.1033 S23: -0.0390 REMARK 3 S31: -0.0472 S32: 0.2510 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B REMARK 3 ORIGIN FOR THE GROUP (A): -25.0471 -35.9751 -18.3809 REMARK 3 T TENSOR REMARK 3 T11: 0.4708 T22: 0.4673 REMARK 3 T33: 0.4198 T12: 0.0230 REMARK 3 T13: 0.0157 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.0830 L22: 0.1424 REMARK 3 L33: 0.0939 L12: -0.0869 REMARK 3 L13: -0.0411 L23: -0.0047 REMARK 3 S TENSOR REMARK 3 S11: 0.1629 S12: 0.1472 S13: -0.1497 REMARK 3 S21: -0.2889 S22: -0.1381 S23: 0.1004 REMARK 3 S31: 0.2681 S32: 0.1862 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RO8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1292135693. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979950 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42535 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.902 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.54500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.61 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE DIBASIC REMARK 280 MONOHYDRATE; 0.1 M BIS-TRIS PROPANE PH 6.5; 20% W/V PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 79.27500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.53450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 79.27500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.53450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 955 REMARK 465 GLU A 956 REMARK 465 GLU A 957 REMARK 465 ASP A 958 REMARK 465 THR A 959 REMARK 465 GLN A 960 REMARK 465 PHE A 961 REMARK 465 ASN A 962 REMARK 465 TYR A 963 REMARK 465 HIS A 964 REMARK 465 ARG A 965 REMARK 465 LYS A 966 REMARK 465 LYS A 967 REMARK 465 ASN A 968 REMARK 465 ILE A 969 REMARK 465 ALA A 970 REMARK 465 ALA A 971 REMARK 465 GLU A 972 REMARK 465 ARG A 973 REMARK 465 LYS A 974 REMARK 465 GLU A 975 REMARK 465 ALA A 976 REMARK 465 LYS A 977 REMARK 465 GLU A 978 REMARK 465 SER A 979 REMARK 465 SER A 980 REMARK 465 LYS A 981 REMARK 465 HIS A 982 REMARK 465 PRO A 983 REMARK 465 THR A 984 REMARK 465 SER A 985 REMARK 465 LEU A 986 REMARK 465 VAL A 987 REMARK 465 PRO A 988 REMARK 465 ARG A 989 REMARK 465 GLY A 990 REMARK 465 SER A 991 REMARK 465 ASP A 992 REMARK 465 ALA A 993 REMARK 465 GLN A 994 REMARK 465 ALA A 995 REMARK 465 GLU A 996 REMARK 465 GLU A 997 REMARK 465 GLU A 998 REMARK 465 ILE A 999 REMARK 465 LYS A 1000 REMARK 465 GLN A 1001 REMARK 465 GLU A 1002 REMARK 465 MET A 1003 REMARK 465 ASN A 1004 REMARK 465 THR A 1005 REMARK 465 LEU A 1006 REMARK 465 GLN A 1007 REMARK 465 GLN A 1008 REMARK 465 LYS A 1009 REMARK 465 LEU A 1010 REMARK 465 ASN A 1011 REMARK 465 GLU A 1012 REMARK 465 GLN A 1013 REMARK 465 GLN A 1014 REMARK 465 SER A 1015 REMARK 465 VAL A 1016 REMARK 465 LEU A 1017 REMARK 465 GLN A 1018 REMARK 465 ARG A 1019 REMARK 465 ILE A 1020 REMARK 465 ALA A 1021 REMARK 465 ALA A 1022 REMARK 465 PRO A 1023 REMARK 465 ASN A 1024 REMARK 465 MET A 1025 REMARK 465 LYS A 1026 REMARK 465 ALA A 1027 REMARK 465 MET A 1028 REMARK 465 GLU A 1029 REMARK 465 LYS A 1030 REMARK 465 LEU A 1031 REMARK 465 GLU A 1032 REMARK 465 SER A 1033 REMARK 465 VAL A 1034 REMARK 465 ARG A 1035 REMARK 465 ASP A 1036 REMARK 465 LYS A 1037 REMARK 465 PHE A 1038 REMARK 465 GLN A 1039 REMARK 465 GLU A 1040 REMARK 465 THR A 1041 REMARK 465 SER A 1042 REMARK 465 ASP A 1043 REMARK 465 GLU A 1044 REMARK 465 PHE A 1045 REMARK 465 GLU A 1046 REMARK 465 ALA A 1047 REMARK 465 ALA A 1048 REMARK 465 ARG A 1049 REMARK 465 LYS A 1050 REMARK 465 ARG A 1051 REMARK 465 ALA A 1226 REMARK 465 ASN A 1227 REMARK 465 PRO A 1228 REMARK 465 ASN A 1229 REMARK 465 PRO A 1230 REMARK 465 ASN A 1231 REMARK 465 GLU A 1232 REMARK 465 GLN A 1233 REMARK 465 MET B 557 REMARK 465 LYS B 558 REMARK 465 ARG B 559 REMARK 465 THR B 560 REMARK 465 GLN B 561 REMARK 465 GLN B 562 REMARK 465 MET B 563 REMARK 465 LEU B 564 REMARK 465 HIS B 565 REMARK 465 GLY B 566 REMARK 465 LEU B 567 REMARK 465 GLN B 568 REMARK 465 ARG B 569 REMARK 465 ALA B 570 REMARK 465 LEU B 571 REMARK 465 ALA B 572 REMARK 465 LYS B 573 REMARK 465 THR B 574 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 168 OE2 GLU A 1105 2.18 REMARK 500 OE1 GLN A 25 O HOH A 1301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1304 O HOH A 1385 4445 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 13 -128.63 41.19 REMARK 500 VAL A 70 30.72 -98.13 REMARK 500 ASN A 109 27.49 48.51 REMARK 500 ARG A 160 19.81 59.04 REMARK 500 LYS A1053 53.07 -68.25 REMARK 500 ASP A1109 -163.24 -129.82 REMARK 500 ASP A1126 4.83 -67.41 REMARK 500 REMARK 500 REMARK: NULL DBREF 8RO8 A 1 977 UNP Q14683 SMC1A_HUMAN 1 200 DBREF 8RO8 A 992 1233 UNP Q14683 SMC1A_HUMAN 992 1233 DBREF 8RO8 B 558 629 UNP O60216 RAD21_HUMAN 558 629 SEQADV 8RO8 GLU A 978 UNP Q14683 LINKER SEQADV 8RO8 SER A 979 UNP Q14683 LINKER SEQADV 8RO8 SER A 980 UNP Q14683 LINKER SEQADV 8RO8 LYS A 981 UNP Q14683 LINKER SEQADV 8RO8 HIS A 982 UNP Q14683 LINKER SEQADV 8RO8 PRO A 983 UNP Q14683 LINKER SEQADV 8RO8 THR A 984 UNP Q14683 LINKER SEQADV 8RO8 SER A 985 UNP Q14683 LINKER SEQADV 8RO8 LEU A 986 UNP Q14683 LINKER SEQADV 8RO8 VAL A 987 UNP Q14683 LINKER SEQADV 8RO8 PRO A 988 UNP Q14683 LINKER SEQADV 8RO8 ARG A 989 UNP Q14683 LINKER SEQADV 8RO8 GLY A 990 UNP Q14683 LINKER SEQADV 8RO8 SER A 991 UNP Q14683 LINKER SEQADV 8RO8 GLN A 1157 UNP Q14683 GLU 1157 ENGINEERED MUTATION SEQADV 8RO8 MET B 557 UNP O60216 INITIATING METHIONINE SEQADV 8RO8 GLY B 630 UNP O60216 EXPRESSION TAG SEQADV 8RO8 SER B 631 UNP O60216 EXPRESSION TAG SEQADV 8RO8 LEU B 632 UNP O60216 EXPRESSION TAG SEQADV 8RO8 GLU B 633 UNP O60216 EXPRESSION TAG SEQADV 8RO8 VAL B 634 UNP O60216 EXPRESSION TAG SEQADV 8RO8 LEU B 635 UNP O60216 EXPRESSION TAG SEQADV 8RO8 PHE B 636 UNP O60216 EXPRESSION TAG SEQADV 8RO8 GLN B 637 UNP O60216 EXPRESSION TAG SEQRES 1 A 456 MET GLY PHE LEU LYS LEU ILE GLU ILE GLU ASN PHE LYS SEQRES 2 A 456 SER TYR LYS GLY ARG GLN ILE ILE GLY PRO PHE GLN ARG SEQRES 3 A 456 PHE THR ALA ILE ILE GLY PRO ASN GLY SER GLY LYS SER SEQRES 4 A 456 ASN LEU MET ASP ALA ILE SER PHE VAL LEU GLY GLU LYS SEQRES 5 A 456 THR SER ASN LEU ARG VAL LYS THR LEU ARG ASP LEU ILE SEQRES 6 A 456 HIS GLY ALA PRO VAL GLY LYS PRO ALA ALA ASN ARG ALA SEQRES 7 A 456 PHE VAL SER MET VAL TYR SER GLU GLU GLY ALA GLU ASP SEQRES 8 A 456 ARG THR PHE ALA ARG VAL ILE VAL GLY GLY SER SER GLU SEQRES 9 A 456 TYR LYS ILE ASN ASN LYS VAL VAL GLN LEU HIS GLU TYR SEQRES 10 A 456 SER GLU GLU LEU GLU LYS LEU GLY ILE LEU ILE LYS ALA SEQRES 11 A 456 ARG ASN PHE LEU VAL PHE GLN GLY ALA VAL GLU SER ILE SEQRES 12 A 456 ALA MET LYS ASN PRO LYS GLU ARG THR ALA LEU PHE GLU SEQRES 13 A 456 GLU ILE SER ARG SER GLY GLU LEU ALA GLN GLU TYR ASP SEQRES 14 A 456 LYS ARG LYS LYS GLU MET VAL LYS ALA GLU GLU ASP THR SEQRES 15 A 456 GLN PHE ASN TYR HIS ARG LYS LYS ASN ILE ALA ALA GLU SEQRES 16 A 456 ARG LYS GLU ALA LYS GLU SER SER LYS HIS PRO THR SER SEQRES 17 A 456 LEU VAL PRO ARG GLY SER ASP ALA GLN ALA GLU GLU GLU SEQRES 18 A 456 ILE LYS GLN GLU MET ASN THR LEU GLN GLN LYS LEU ASN SEQRES 19 A 456 GLU GLN GLN SER VAL LEU GLN ARG ILE ALA ALA PRO ASN SEQRES 20 A 456 MET LYS ALA MET GLU LYS LEU GLU SER VAL ARG ASP LYS SEQRES 21 A 456 PHE GLN GLU THR SER ASP GLU PHE GLU ALA ALA ARG LYS SEQRES 22 A 456 ARG ALA LYS LYS ALA LYS GLN ALA PHE GLU GLN ILE LYS SEQRES 23 A 456 LYS GLU ARG PHE ASP ARG PHE ASN ALA CYS PHE GLU SER SEQRES 24 A 456 VAL ALA THR ASN ILE ASP GLU ILE TYR LYS ALA LEU SER SEQRES 25 A 456 ARG ASN SER SER ALA GLN ALA PHE LEU GLY PRO GLU ASN SEQRES 26 A 456 PRO GLU GLU PRO TYR LEU ASP GLY ILE ASN TYR ASN CYS SEQRES 27 A 456 VAL ALA PRO GLY LYS ARG PHE ARG PRO MET ASP ASN LEU SEQRES 28 A 456 SER GLY GLY GLU LYS THR VAL ALA ALA LEU ALA LEU LEU SEQRES 29 A 456 PHE ALA ILE HIS SER TYR LYS PRO ALA PRO PHE PHE VAL SEQRES 30 A 456 LEU ASP GLN ILE ASP ALA ALA LEU ASP ASN THR ASN ILE SEQRES 31 A 456 GLY LYS VAL ALA ASN TYR ILE LYS GLU GLN SER THR CYS SEQRES 32 A 456 ASN PHE GLN ALA ILE VAL ILE SER LEU LYS GLU GLU PHE SEQRES 33 A 456 TYR THR LYS ALA GLU SER LEU ILE GLY VAL TYR PRO GLU SEQRES 34 A 456 GLN GLY ASP CYS VAL ILE SER LYS VAL LEU THR PHE ASP SEQRES 35 A 456 LEU THR LYS TYR PRO ASP ALA ASN PRO ASN PRO ASN GLU SEQRES 36 A 456 GLN SEQRES 1 B 81 MET LYS ARG THR GLN GLN MET LEU HIS GLY LEU GLN ARG SEQRES 2 B 81 ALA LEU ALA LYS THR GLY ALA GLU SER ILE SER LEU LEU SEQRES 3 B 81 GLU LEU CYS ARG ASN THR ASN ARG LYS GLN ALA ALA ALA SEQRES 4 B 81 LYS PHE TYR SER PHE LEU VAL LEU LYS LYS GLN GLN ALA SEQRES 5 B 81 ILE GLU LEU THR GLN GLU GLU PRO TYR SER ASP ILE ILE SEQRES 6 B 81 ALA THR PRO GLY PRO ARG PHE HIS GLY SER LEU GLU VAL SEQRES 7 B 81 LEU PHE GLN FORMUL 3 HOH *132(H2 O) HELIX 1 AA1 SER A 36 LEU A 49 1 14 HELIX 2 AA2 LYS A 52 LEU A 56 5 5 HELIX 3 AA3 THR A 60 ILE A 65 5 6 HELIX 4 AA4 GLY A 67 GLY A 71 5 5 HELIX 5 AA5 GLN A 113 LYS A 123 1 11 HELIX 6 AA6 GLY A 138 MET A 145 1 8 HELIX 7 AA7 ASN A 147 SER A 159 1 13 HELIX 8 AA8 SER A 161 GLU A 163 5 3 HELIX 9 AA9 LEU A 164 LYS A 177 1 14 HELIX 10 AB1 LYS A 1054 ARG A 1090 1 37 HELIX 11 AB2 GLU A 1105 ASP A 1109 5 5 HELIX 12 AB3 ASP A 1126 LEU A 1128 5 3 HELIX 13 AB4 SER A 1129 SER A 1146 1 18 HELIX 14 AB5 ASN A 1166 ASN A 1181 1 16 HELIX 15 AB6 LYS A 1190 THR A 1195 1 6 HELIX 16 AB7 THR A 1221 TYR A 1223 5 3 HELIX 17 AB8 LEU B 581 CYS B 585 1 5 HELIX 18 AB9 ASN B 589 GLN B 606 1 18 HELIX 19 AC1 SER B 631 PHE B 636 1 6 SHEET 1 AA1 6 TYR A 15 ILE A 21 0 SHEET 2 AA1 6 PHE A 3 PHE A 12 -1 N ILE A 7 O ILE A 21 SHEET 3 AA1 6 ARG A 77 SER A 85 -1 O SER A 85 N PHE A 3 SHEET 4 AA1 6 ARG A 92 VAL A 99 -1 O ARG A 92 N TYR A 84 SHEET 5 AA1 6 SER A 102 ILE A 107 -1 O GLU A 104 N VAL A 97 SHEET 6 AA1 6 LYS A 110 VAL A 112 -1 O VAL A 112 N TYR A 105 SHEET 1 AA2 6 LEU A 134 VAL A 135 0 SHEET 2 AA2 6 PHE A1152 ASP A1156 1 O VAL A1154 N VAL A 135 SHEET 3 AA2 6 GLN A1183 ILE A1187 1 O ILE A1187 N LEU A1155 SHEET 4 AA2 6 PHE A 27 ILE A 31 1 N ILE A 30 O VAL A1186 SHEET 5 AA2 6 SER A1199 GLU A1206 1 O VAL A1203 N ILE A 31 SHEET 6 AA2 6 ILE A1212 ASP A1219 -1 O PHE A1218 N LEU A1200 SHEET 1 AA3 3 GLN A1095 PRO A1100 0 SHEET 2 AA3 3 ILE A1111 VAL A1116 -1 O VAL A1116 N GLN A1095 SHEET 3 AA3 3 PHE A1122 PRO A1124 -1 O ARG A1123 N CYS A1115 SHEET 1 AA4 3 ILE B 579 SER B 580 0 SHEET 2 AA4 3 ILE B 620 PRO B 624 -1 O ALA B 622 N ILE B 579 SHEET 3 AA4 3 ILE B 609 GLN B 613 -1 N GLU B 610 O THR B 623 CISPEP 1 GLY A 22 PRO A 23 0 3.68 CRYST1 158.550 67.069 51.629 90.00 92.32 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006307 0.000000 0.000255 0.00000 SCALE2 0.000000 0.014910 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019385 0.00000