HEADER OXIDOREDUCTASE 15-JAN-24 8RPG TITLE CRYSTAL STRUCTURE OF AN ALCOHOL OXIDASE FROM STREPTOMYCES TITLE 2 HIROSHIMENSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALCOHOL OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.1.3.7; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES HIROSHIMENSIS; SOURCE 3 ORGANISM_TAXID: 66424; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ALCOHOL OXIDASE, STREPTOMYCES HIROSHIMENSIS, OXIDOREDUCTASE, KEYWDS 2 FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.MARTINEZ-JULVEZ,P.FERREIRA,P.CINCA-FERNANDO REVDAT 1 13-NOV-24 8RPG 0 JRNL AUTH P.CINCA-FERNANDO,C.ASCASO-ALEGRE,E.SEVILLA, JRNL AUTH 2 M.MARTINEZ-JULVEZ,J.MANGAS-SANCHEZ,P.FERREIRA JRNL TITL DISCOVERY, CHARACTERIZATION, AND SYNTHETIC POTENTIAL OF TWO JRNL TITL 2 NOVEL BACTERIAL ARYL-ALCOHOL OXIDASES. JRNL REF APPL.MICROBIOL.BIOTECHNOL. V. 108 498 2024 JRNL REFN ESSN 1432-0614 JRNL PMID 39470785 JRNL DOI 10.1007/S00253-024-13314-Z REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0419 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 35032 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1898 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2545 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.1650 REMARK 3 BIN FREE R VALUE SET COUNT : 130 REMARK 3 BIN FREE R VALUE : 0.2240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3822 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 99 REMARK 3 SOLVENT ATOMS : 304 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.68000 REMARK 3 B22 (A**2) : -1.67000 REMARK 3 B33 (A**2) : 0.99000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.148 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.104 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4010 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 3747 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5470 ; 1.651 ; 1.820 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8590 ; 0.573 ; 1.735 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 517 ; 6.689 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 46 ; 8.949 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 552 ;12.120 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 598 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4958 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 923 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2071 ; 2.046 ; 2.395 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2070 ; 2.043 ; 2.393 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2587 ; 2.735 ; 4.290 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2588 ; 2.737 ; 4.292 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1939 ; 3.455 ; 2.784 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1940 ; 3.455 ; 2.784 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2884 ; 5.180 ; 4.901 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4496 ; 8.338 ;27.340 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4434 ; 7.508 ;26.010 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8RPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-24. REMARK 100 THE DEPOSITION ID IS D_1292135911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-OCT-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36978 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 97.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.23500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30 % POLYETHYLENE GLYCOL 4000 100 MM REMARK 280 TRIS PH 8.5 200 MM MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 40.25500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.84400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.25500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.84400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 321 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ARG A 462 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 12 55.98 -94.51 REMARK 500 THR A 83 173.61 179.31 REMARK 500 LEU A 280 80.30 -152.87 REMARK 500 ILE A 329 -50.39 81.74 REMARK 500 ASP A 489 -168.85 -175.41 REMARK 500 ARG A 498 48.94 -88.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 458 GLY A 459 148.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 120 0.08 SIDE CHAIN REMARK 500 ARG A 228 0.07 SIDE CHAIN REMARK 500 ARG A 285 0.12 SIDE CHAIN REMARK 500 ARG A 322 0.08 SIDE CHAIN REMARK 500 ARG A 511 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8RPG A -20 520 PDB 8RPG 8RPG -20 520 SEQRES 1 A 541 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 541 LEU VAL PRO ARG GLY SER HIS MET SER GLY THR ALA PHE SEQRES 3 A 541 ASP TYR VAL ILE VAL GLY ALA GLY SER ALA GLY CYS VAL SEQRES 4 A 541 LEU ALA ALA ARG LEU SER GLU ASP PRO GLU VAL ARG VAL SEQRES 5 A 541 ALA LEU VAL GLU ALA GLY GLY ALA ASP THR ASP ARG ALA SEQRES 6 A 541 VAL ARG ILE PRO ALA ALA ALA ALA HIS LEU PHE GLY THR SEQRES 7 A 541 GLY TYR ASP TRP GLY TYR SER THR VAL PRO GLN ALA GLY SEQRES 8 A 541 LEU GLY GLY ARG GLU VAL TYR TRP PRO ARG GLY ARG THR SEQRES 9 A 541 LEU GLY GLY SER SER SER VAL ASN PHE LEU MET TRP VAL SEQRES 10 A 541 PRO GLY HIS ALA GLU ASP TYR GLU PRO TRP ALA ARG ALA SEQRES 11 A 541 ALA GLY ASP LEU TRP SER TRP ASP ALA VAL ARG PRO PHE SEQRES 12 A 541 LEU ARG GLY ALA GLU HIS TRP THR GLY GLY PRO GLY ALA SEQRES 13 A 541 VAL TYR GLY THR GLU GLY PRO LEU TRP ILE SER PRO PRO SEQRES 14 A 541 ARG SER PRO ASP PRO THR THR ALA ARG PHE LEU GLN ALA SEQRES 15 A 541 CYS GLY GLU ALA GLY LEU LYS GLU MET THR GLY GLY PRO SEQRES 16 A 541 GLY GLY PRO GLU HIS SER GLY CYS ALA LEU THR PRO LEU SEQRES 17 A 541 ASN GLU ARG ASN GLY ALA ARG TRP SER ALA ALA ASP GLY SEQRES 18 A 541 TYR LEU ARG PRO ALA MET ASP ARG GLY ASN LEU GLU VAL SEQRES 19 A 541 ILE THR GLY GLU GLN VAL HIS ARG VAL LEU LEU GLU ASP SEQRES 20 A 541 GLY ARG ALA THR GLY VAL GLU LEU ALA GLY ARG THR LEU SEQRES 21 A 541 THR ALA ARG ARG GLU VAL VAL LEU SER ALA GLY THR VAL SEQRES 22 A 541 GLY SER ALA GLN LEU LEU MET LEU SER GLY ILE GLY ASP SEQRES 23 A 541 GLY PRO GLN LEU ARG ALA ALA GLY VAL GLU PRO ARG VAL SEQRES 24 A 541 GLN LEU PRO GLY VAL GLY ARG ASN LEU GLN ASP HIS VAL SEQRES 25 A 541 ALA VAL ASP VAL MET MET ARG ALA THR VAL ALA VAL PRO SEQRES 26 A 541 LEU ALA ASP PRO ASP THR PRO ALA ASN ARG GLU LEU TYR SEQRES 27 A 541 GLU ARG GLU ARG ARG GLY PRO LEU SER SER ASN ILE ALA SEQRES 28 A 541 GLU ALA VAL ALA PHE LEU ARG ALA ASP GLY GLY THR GLY SEQRES 29 A 541 ALA PRO ASP LEU GLU LEU ILE TRP ALA PRO VAL ALA ASP SEQRES 30 A 541 SER GLU ALA VAL GLY GLY GLN GLY LEU THR ILE ALA VAL SEQRES 31 A 541 VAL LEU LEU GLN PRO ASP SER ARG GLY GLY ILE THR LEU SEQRES 32 A 541 ALA GLY ALA ASP PRO SER ALA ALA PRO LEU ILE ASP PRO SEQRES 33 A 541 GLY TYR LEU GLY ALA GLU SER ASP VAL ARG THR LEU ALA SEQRES 34 A 541 ALA GLY VAL ARG PHE ALA GLU ARG LEU PHE ALA ALA GLU SEQRES 35 A 541 ALA LEU ARG GLY LEU VAL ASP GLY PRO ALA ALA PRO TRP SEQRES 36 A 541 PRO GLY PRO VAL GLY ASP ASP ALA LEU GLU ARG LEU VAL SEQRES 37 A 541 ARG GLU ARG ALA SER THR LEU PHE HIS PRO VAL GLY THR SEQRES 38 A 541 CYS ARG MET GLY ARG ALA GLY ASP GLU GLN ALA VAL VAL SEQRES 39 A 541 ASP PRO TRP LEU ARG VAL HIS GLY VAL GLU GLY LEU ARG SEQRES 40 A 541 VAL ALA ASP ALA SER VAL ILE PRO ARG VAL PRO ARG GLY SEQRES 41 A 541 HIS THR HIS ALA HIS ALA VAL MET ILE GLY GLU ARG ALA SEQRES 42 A 541 ALA GLU LEU ILE ARG PRO ALA GLY HET FAD A 601 53 HET PGE A 602 10 HET GOL A 603 6 HET GOL A 604 6 HET GOL A 605 6 HET GOL A 606 6 HET GOL A 607 6 HET GOL A 608 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 PGE C6 H14 O4 FORMUL 4 GOL 6(C3 H8 O3) FORMUL 10 HOH *304(H2 O) HELIX 1 AA1 GLY A 13 SER A 24 1 12 HELIX 2 AA2 ASP A 42 ILE A 47 1 6 HELIX 3 AA3 PRO A 48 PHE A 55 5 8 HELIX 4 AA4 GLN A 68 GLY A 72 5 5 HELIX 5 AA5 GLY A 85 VAL A 90 5 6 HELIX 6 AA6 HIS A 99 ASP A 102 5 4 HELIX 7 AA7 TYR A 103 GLY A 111 1 9 HELIX 8 AA8 ASP A 112 TRP A 114 5 3 HELIX 9 AA9 SER A 115 GLY A 125 1 11 HELIX 10 AB1 ASP A 152 ALA A 165 1 14 HELIX 11 AB2 SER A 196 TYR A 201 1 6 HELIX 12 AB3 TYR A 201 MET A 206 1 6 HELIX 13 AB4 ALA A 249 SER A 261 1 13 HELIX 14 AB5 ASP A 265 ALA A 272 1 8 HELIX 15 AB6 VAL A 303 ASP A 307 5 5 HELIX 16 AB7 THR A 310 ARG A 321 1 12 HELIX 17 AB8 GLY A 323 SER A 327 5 5 HELIX 18 AB9 SER A 357 GLY A 361 5 5 HELIX 19 AC1 ALA A 400 ALA A 420 1 21 HELIX 20 AC2 ALA A 420 GLY A 425 1 6 HELIX 21 AC3 GLY A 439 ALA A 451 1 13 HELIX 22 AC4 ASP A 489 ILE A 493 5 5 HELIX 23 AC5 THR A 501 ARG A 517 1 17 SHEET 1 AA1 6 LEU A 211 ILE A 214 0 SHEET 2 AA1 6 VAL A 31 VAL A 34 1 N LEU A 33 O ILE A 214 SHEET 3 AA1 6 ALA A 4 VAL A 10 1 N ILE A 9 O ALA A 32 SHEET 4 AA1 6 THR A 238 LEU A 247 1 O ARG A 242 N PHE A 5 SHEET 5 AA1 6 ARG A 228 GLU A 233 -1 N THR A 230 O ALA A 241 SHEET 6 AA1 6 ARG A 221 GLU A 225 -1 N ARG A 221 O GLU A 233 SHEET 1 AA2 5 LEU A 211 ILE A 214 0 SHEET 2 AA2 5 VAL A 31 VAL A 34 1 N LEU A 33 O ILE A 214 SHEET 3 AA2 5 ALA A 4 VAL A 10 1 N ILE A 9 O ALA A 32 SHEET 4 AA2 5 THR A 238 LEU A 247 1 O ARG A 242 N PHE A 5 SHEET 5 AA2 5 LEU A 485 VAL A 487 1 O ARG A 486 N LEU A 247 SHEET 1 AA3 2 TYR A 63 SER A 64 0 SHEET 2 AA3 2 TYR A 77 TRP A 78 -1 O TRP A 78 N TYR A 63 SHEET 1 AA4 2 GLU A 127 TRP A 129 0 SHEET 2 AA4 2 LEU A 143 ILE A 145 1 O LEU A 143 N HIS A 128 SHEET 1 AA5 6 GLY A 181 LEU A 184 0 SHEET 2 AA5 6 ALA A 332 LEU A 336 -1 O PHE A 335 N GLY A 181 SHEET 3 AA5 6 LEU A 347 ALA A 352 -1 O LEU A 349 N ALA A 334 SHEET 4 AA5 6 GLY A 364 LEU A 371 -1 O ALA A 368 N ILE A 350 SHEET 5 AA5 6 VAL A 291 ALA A 299 -1 N VAL A 291 O LEU A 371 SHEET 6 AA5 6 VAL A 427 PRO A 430 -1 O GLY A 429 N ARG A 298 SHEET 1 AA6 6 GLY A 181 LEU A 184 0 SHEET 2 AA6 6 ALA A 332 LEU A 336 -1 O PHE A 335 N GLY A 181 SHEET 3 AA6 6 LEU A 347 ALA A 352 -1 O LEU A 349 N ALA A 334 SHEET 4 AA6 6 GLY A 364 LEU A 371 -1 O ALA A 368 N ILE A 350 SHEET 5 AA6 6 VAL A 291 ALA A 299 -1 N VAL A 291 O LEU A 371 SHEET 6 AA6 6 SER A 452 THR A 453 -1 O SER A 452 N ALA A 292 SHEET 1 AA7 2 GLU A 189 ARG A 190 0 SHEET 2 AA7 2 ALA A 193 ARG A 194 -1 O ALA A 193 N ARG A 190 SHEET 1 AA8 2 ILE A 263 GLY A 264 0 SHEET 2 AA8 2 VAL A 278 GLN A 279 1 O VAL A 278 N GLY A 264 SHEET 1 AA9 2 GLY A 379 THR A 381 0 SHEET 2 AA9 2 LEU A 392 ASP A 394 -1 O LEU A 392 N THR A 381 CISPEP 1 ALA A 432 PRO A 433 0 4.21 CRYST1 80.510 97.688 68.047 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012421 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010237 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014696 0.00000 CONECT 3824 3825 3826 3827 3876 CONECT 3825 3824 CONECT 3826 3824 CONECT 3827 3824 3828 CONECT 3828 3827 3829 CONECT 3829 3828 3830 3831 CONECT 3830 3829 3835 CONECT 3831 3829 3832 3833 CONECT 3832 3831 CONECT 3833 3831 3834 3835 CONECT 3834 3833 CONECT 3835 3830 3833 3836 CONECT 3836 3835 3837 3845 CONECT 3837 3836 3838 CONECT 3838 3837 3839 CONECT 3839 3838 3840 3845 CONECT 3840 3839 3841 3842 CONECT 3841 3840 CONECT 3842 3840 3843 CONECT 3843 3842 3844 CONECT 3844 3843 3845 CONECT 3845 3836 3839 3844 CONECT 3846 3847 3863 CONECT 3847 3846 3848 3849 CONECT 3848 3847 CONECT 3849 3847 3850 CONECT 3850 3849 3851 3852 CONECT 3851 3850 CONECT 3852 3850 3853 3863 CONECT 3853 3852 3854 CONECT 3854 3853 3855 3861 CONECT 3855 3854 3856 CONECT 3856 3855 3857 3858 CONECT 3857 3856 CONECT 3858 3856 3859 3860 CONECT 3859 3858 CONECT 3860 3858 3861 CONECT 3861 3854 3860 3862 CONECT 3862 3861 3863 3864 CONECT 3863 3846 3852 3862 CONECT 3864 3862 3865 CONECT 3865 3864 3866 3867 CONECT 3866 3865 CONECT 3867 3865 3868 3869 CONECT 3868 3867 CONECT 3869 3867 3870 3871 CONECT 3870 3869 CONECT 3871 3869 3872 CONECT 3872 3871 3873 CONECT 3873 3872 3874 3875 3876 CONECT 3874 3873 CONECT 3875 3873 CONECT 3876 3824 3873 CONECT 3877 3878 3879 CONECT 3878 3877 CONECT 3879 3877 3880 CONECT 3880 3879 3881 CONECT 3881 3880 3882 CONECT 3882 3881 3886 CONECT 3883 3884 CONECT 3884 3883 3885 CONECT 3885 3884 3886 CONECT 3886 3882 3885 CONECT 3887 3888 3889 CONECT 3888 3887 CONECT 3889 3887 3890 3891 CONECT 3890 3889 CONECT 3891 3889 3892 CONECT 3892 3891 CONECT 3893 3894 3895 CONECT 3894 3893 CONECT 3895 3893 3896 3897 CONECT 3896 3895 CONECT 3897 3895 3898 CONECT 3898 3897 CONECT 3899 3900 3901 CONECT 3900 3899 CONECT 3901 3899 3902 3903 CONECT 3902 3901 CONECT 3903 3901 3904 CONECT 3904 3903 CONECT 3905 3906 3907 CONECT 3906 3905 CONECT 3907 3905 3908 3909 CONECT 3908 3907 CONECT 3909 3907 3910 CONECT 3910 3909 CONECT 3911 3912 3913 CONECT 3912 3911 CONECT 3913 3911 3914 3915 CONECT 3914 3913 CONECT 3915 3913 3916 CONECT 3916 3915 CONECT 3917 3918 3919 CONECT 3918 3917 CONECT 3919 3917 3920 3921 CONECT 3920 3919 CONECT 3921 3919 3922 CONECT 3922 3921 MASTER 345 0 8 23 33 0 0 6 4225 1 99 42 END