HEADER TRANSFERASE 02-FEB-24 8RVS TITLE CRYSTAL STRUCTURE OF ALPHA KETO ACID C-METHYL-TRANSFERASES MRSA BOUND TITLE 2 TO SAM COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-KETOARGININE METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SYRINGAE; SOURCE 3 ORGANISM_TAXID: 317; SOURCE 4 GENE: MRSA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21-GOLD (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28B (+) KEYWDS S ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASES, BIOCATALYSIS, C- KEYWDS 2 ALKYLATION, ASYMMETRIC METHYLATION, MUTAGENESIS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.GERHARDT,J.N.ANDEXER REVDAT 3 16-OCT-24 8RVS 1 JRNL REVDAT 2 24-JUL-24 8RVS 1 JRNL REVDAT 1 03-JUL-24 8RVS 0 JRNL AUTH C.SOMMER-KAMANN,J.BREILTGENS,Z.ZOU,S.GERHARDT, JRNL AUTH 2 R.SALEEM-BATCHA,F.KEMPER,O.EINSLE,J.N.ANDEXER,M.MULLER JRNL TITL STRUCTURES AND PROTEIN ENGINEERING OF THE ALPHA-KETO ACID JRNL TITL 2 C-METHYLTRANSFERASES SGVM AND MRSA FOR RATIONAL SUBSTRATE JRNL TITL 3 TRANSFER. JRNL REF CHEMBIOCHEM V. 25 00258 2024 JRNL REFN ESSN 1439-7633 JRNL PMID 38887142 JRNL DOI 10.1002/CBIC.202400258 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 66.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 90041 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 4518 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.64 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.66 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.08 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : 0.3202 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 84 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5316 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 719 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.95800 REMARK 3 B22 (A**2) : -4.03570 REMARK 3 B33 (A**2) : 4.99370 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.210 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.098 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.093 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.091 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.090 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 5527 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 7490 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1901 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 951 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 5527 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 707 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5714 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.91 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.44 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.22 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 159.908 20.1533 -1.7308 REMARK 3 T TENSOR REMARK 3 T11: 0.0877 T22: 0.076 REMARK 3 T33: -0.0163 T12: -0.0474 REMARK 3 T13: 0.0344 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.1353 L22: 0.1137 REMARK 3 L33: 0.2436 L12: 0.0212 REMARK 3 L13: -0.0281 L23: -0.0751 REMARK 3 S TENSOR REMARK 3 S11: -0.0467 S12: -0.082 S13: 0.1096 REMARK 3 S21: -0.082 S22: 0.027 S23: 0.0255 REMARK 3 S31: 0.1096 S32: 0.0255 S33: 0.0197 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 163.143 41.1137 34.4308 REMARK 3 T TENSOR REMARK 3 T11: 0.0804 T22: 0.0618 REMARK 3 T33: -0.0199 T12: 0.021 REMARK 3 T13: -0.0278 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.1299 L22: 0.0702 REMARK 3 L33: 0.3749 L12: 0.0088 REMARK 3 L13: -0.0974 L23: -0.101 REMARK 3 S TENSOR REMARK 3 S11: -0.0381 S12: 0.0621 S13: -0.1047 REMARK 3 S21: 0.0621 S22: 0.0027 S23: 0.1445 REMARK 3 S31: -0.1047 S32: 0.1445 S33: 0.0354 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8RVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1292136316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90343 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.632 REMARK 200 RESOLUTION RANGE LOW (A) : 66.533 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 1.57400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.5, 300 MM NACL, 28% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 73.62300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 73.62300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 47110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -267.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 294.49200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 65.68000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 74.58000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 294.49200 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 65.68000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 74.58000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 21 REMARK 465 ASN A 22 REMARK 465 LEU A 23 REMARK 465 LEU A 24 REMARK 465 ASP A 25 REMARK 465 SER A 26 REMARK 465 ILE A 27 REMARK 465 LYS A 28 REMARK 465 SER A 29 REMARK 465 MET B 21 REMARK 465 ASN B 22 REMARK 465 LEU B 23 REMARK 465 LEU B 24 REMARK 465 ASP B 25 REMARK 465 SER B 26 REMARK 465 ILE B 27 REMARK 465 LYS B 28 REMARK 465 SER B 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 GLU B 30 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1180 O HOH B 1354 1.95 REMARK 500 O HOH A 1105 O HOH A 1114 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 1325 O HOH B 1457 2765 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 70 -51.78 76.68 REMARK 500 VAL A 128 -61.00 -91.78 REMARK 500 ASP A 167 -60.50 -109.56 REMARK 500 GLU B 70 -52.92 76.78 REMARK 500 VAL B 128 -60.09 -92.42 REMARK 500 ASP B 167 -60.65 -108.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1506 DISTANCE = 6.09 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1003 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 322 O REMARK 620 2 THR A 325 O 97.5 REMARK 620 3 GLN A 327 O 78.7 96.0 REMARK 620 4 HOH A1314 O 157.6 92.0 80.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1004 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1145 O REMARK 620 2 HOH A1146 O 92.5 REMARK 620 3 HOH A1184 O 82.2 152.5 REMARK 620 4 HOH A1272 O 147.6 104.5 93.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1003 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 322 O REMARK 620 2 THR B 325 O 92.4 REMARK 620 3 GLN B 327 O 82.5 95.0 REMARK 620 4 HOH B1379 O 159.6 92.8 77.5 REMARK 620 5 HOH B1408 O 98.7 139.5 124.9 90.0 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1001 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 327 OE1 REMARK 620 2 HOH B1189 O 110.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1004 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B1102 O REMARK 620 2 HOH B1174 O 94.3 REMARK 620 3 HOH B1284 O 147.7 85.5 REMARK 620 4 HOH B1304 O 95.2 159.4 96.0 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8R4Z RELATED DB: PDB REMARK 900 NATIVE STRUCTURE DBREF 8RVS A 21 370 UNP D5FKJ3 MRSA_PSESY 1 350 DBREF 8RVS B 21 370 UNP D5FKJ3 MRSA_PSESY 1 350 SEQRES 1 A 350 MET ASN LEU LEU ASP SER ILE LYS SER GLU ASN THR GLY SEQRES 2 A 350 PHE GLU THR THR LEU ILE LYS GLY ILE GLU PRO ILE ARG SEQRES 3 A 350 GLN PHE VAL LEU ALA ILE SER ILE TYR HIS LEU PHE ASP SEQRES 4 A 350 THR LYS LEU PHE SER LEU LEU ILE LYS HIS GLU VAL ALA SEQRES 5 A 350 SER PRO GLU VAL ALA CYS ASN GLU LEU GLY MET GLU LYS SEQRES 6 A 350 GLU LYS LEU LEU GLY LEU PHE ARG TYR LEU LYS ASN GLU SEQRES 7 A 350 GLY ILE LEU LEU GLU THR ILE ASP GLY PHE SER LEU SER SEQRES 8 A 350 LYS GLU GLY HIS ALA LEU ALA PRO PHE GLU GLY TRP TYR SEQRES 9 A 350 VAL MET LEU VAL GLY GLY TYR ALA THR THR PHE LEU GLN SEQRES 10 A 350 MET GLY GLU ARG LEU GLN GLU GLY ALA GLY TRP ALA THR SEQRES 11 A 350 ARG ASP ALA THR LYS VAL GLY VAL GLY SER CYS GLY ILE SEQRES 12 A 350 SER HIS PHE ASP ALA ILE PRO LEU THR ARG SER LEU MET SEQRES 13 A 350 ALA GLN ALA PRO GLY THR CYS THR LYS LEU LEU ASP LEU SEQRES 14 A 350 GLY CYS GLY ASN GLY ARG TYR LEU ALA GLU PHE CYS LYS SEQRES 15 A 350 ALA LEU PRO GLN ILE GLN ALA TRP GLY ALA GLU PRO ASP SEQRES 16 A 350 ARG GLY GLY PHE GLU GLU ALA VAL ASP LEU ILE GLU LYS SEQRES 17 A 350 GLU GLY LEU SER HIS ARG VAL HIS ILE SER HIS SER GLY SEQRES 18 A 350 ALA VAL GLU PHE LEU ASP SER ASP PHE ASP PHE GLU PRO SEQRES 19 A 350 ASP PHE ILE VAL LEU GLY PHE VAL LEU HIS GLU ILE LEU SEQRES 20 A 350 GLY GLN ALA GLY ARG PRO ALA VAL VAL ASN PHE LEU LYS SEQRES 21 A 350 LYS ILE VAL HIS ARG PHE PRO ALA ILE ASN LEU ILE ILE SEQRES 22 A 350 ILE GLU VAL ASP ASN GLN PHE ASP ASN ALA GLY ALA MET SEQRES 23 A 350 ARG HIS GLY LEU ALA LEU ALA TYR TYR ASN PRO TYR TYR SEQRES 24 A 350 LEU LEU HIS CYS PHE THR ASN GLN LEU LEU VAL GLN ASP SEQRES 25 A 350 ALA ASP TRP LEU ASP ILE PHE ALA GLU ALA GLY LEU SER SEQRES 26 A 350 LEU VAL THR ARG GLU THR THR SER ASP GLN VAL ASP SER SEQRES 27 A 350 THR GLY LEU GLU ILE GLY TYR LEU LEU ARG ARG ALA SEQRES 1 B 350 MET ASN LEU LEU ASP SER ILE LYS SER GLU ASN THR GLY SEQRES 2 B 350 PHE GLU THR THR LEU ILE LYS GLY ILE GLU PRO ILE ARG SEQRES 3 B 350 GLN PHE VAL LEU ALA ILE SER ILE TYR HIS LEU PHE ASP SEQRES 4 B 350 THR LYS LEU PHE SER LEU LEU ILE LYS HIS GLU VAL ALA SEQRES 5 B 350 SER PRO GLU VAL ALA CYS ASN GLU LEU GLY MET GLU LYS SEQRES 6 B 350 GLU LYS LEU LEU GLY LEU PHE ARG TYR LEU LYS ASN GLU SEQRES 7 B 350 GLY ILE LEU LEU GLU THR ILE ASP GLY PHE SER LEU SER SEQRES 8 B 350 LYS GLU GLY HIS ALA LEU ALA PRO PHE GLU GLY TRP TYR SEQRES 9 B 350 VAL MET LEU VAL GLY GLY TYR ALA THR THR PHE LEU GLN SEQRES 10 B 350 MET GLY GLU ARG LEU GLN GLU GLY ALA GLY TRP ALA THR SEQRES 11 B 350 ARG ASP ALA THR LYS VAL GLY VAL GLY SER CYS GLY ILE SEQRES 12 B 350 SER HIS PHE ASP ALA ILE PRO LEU THR ARG SER LEU MET SEQRES 13 B 350 ALA GLN ALA PRO GLY THR CYS THR LYS LEU LEU ASP LEU SEQRES 14 B 350 GLY CYS GLY ASN GLY ARG TYR LEU ALA GLU PHE CYS LYS SEQRES 15 B 350 ALA LEU PRO GLN ILE GLN ALA TRP GLY ALA GLU PRO ASP SEQRES 16 B 350 ARG GLY GLY PHE GLU GLU ALA VAL ASP LEU ILE GLU LYS SEQRES 17 B 350 GLU GLY LEU SER HIS ARG VAL HIS ILE SER HIS SER GLY SEQRES 18 B 350 ALA VAL GLU PHE LEU ASP SER ASP PHE ASP PHE GLU PRO SEQRES 19 B 350 ASP PHE ILE VAL LEU GLY PHE VAL LEU HIS GLU ILE LEU SEQRES 20 B 350 GLY GLN ALA GLY ARG PRO ALA VAL VAL ASN PHE LEU LYS SEQRES 21 B 350 LYS ILE VAL HIS ARG PHE PRO ALA ILE ASN LEU ILE ILE SEQRES 22 B 350 ILE GLU VAL ASP ASN GLN PHE ASP ASN ALA GLY ALA MET SEQRES 23 B 350 ARG HIS GLY LEU ALA LEU ALA TYR TYR ASN PRO TYR TYR SEQRES 24 B 350 LEU LEU HIS CYS PHE THR ASN GLN LEU LEU VAL GLN ASP SEQRES 25 B 350 ALA ASP TRP LEU ASP ILE PHE ALA GLU ALA GLY LEU SER SEQRES 26 B 350 LEU VAL THR ARG GLU THR THR SER ASP GLN VAL ASP SER SEQRES 27 B 350 THR GLY LEU GLU ILE GLY TYR LEU LEU ARG ARG ALA HET MG A1001 1 HET SAM A1002 27 HET NA A1003 1 HET NA A1004 1 HET PEG A1005 7 HET MG B1001 1 HET SAM B1002 27 HET NA B1003 1 HET NA B1004 1 HET PEG B1005 7 HET EDO B1006 4 HETNAM MG MAGNESIUM ION HETNAM SAM S-ADENOSYLMETHIONINE HETNAM NA SODIUM ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 MG 2(MG 2+) FORMUL 4 SAM 2(C15 H22 N6 O5 S) FORMUL 5 NA 4(NA 1+) FORMUL 7 PEG 2(C4 H10 O3) FORMUL 13 EDO C2 H6 O2 FORMUL 14 HOH *719(H2 O) HELIX 1 AA1 GLY A 33 ILE A 42 1 10 HELIX 2 AA2 ILE A 42 THR A 60 1 19 HELIX 3 AA3 LYS A 61 GLU A 70 1 10 HELIX 4 AA4 SER A 73 GLY A 82 1 10 HELIX 5 AA5 GLU A 84 GLU A 98 1 15 HELIX 6 AA6 SER A 111 LEU A 117 1 7 HELIX 7 AA7 PHE A 120 VAL A 128 1 9 HELIX 8 AA8 TYR A 131 LEU A 142 1 12 HELIX 9 AA9 ASP A 152 HIS A 165 1 14 HELIX 10 AB1 ASP A 167 GLN A 178 1 12 HELIX 11 AB2 GLY A 194 LEU A 204 1 11 HELIX 12 AB3 ASP A 215 GLU A 229 1 15 HELIX 13 AB4 GLY A 241 SER A 248 1 8 HELIX 14 AB5 VAL A 262 GLY A 271 1 10 HELIX 15 AB6 GLY A 271 PHE A 286 1 16 HELIX 16 AB7 GLY A 304 ARG A 307 5 4 HELIX 17 AB8 HIS A 308 TYR A 314 1 7 HELIX 18 AB9 TYR A 314 THR A 325 1 12 HELIX 19 AC1 GLN A 331 ALA A 342 1 12 HELIX 20 AC2 GLY B 33 ILE B 42 1 10 HELIX 21 AC3 ILE B 42 THR B 60 1 19 HELIX 22 AC4 LYS B 61 GLU B 70 1 10 HELIX 23 AC5 SER B 73 GLY B 82 1 10 HELIX 24 AC6 GLU B 84 GLU B 98 1 15 HELIX 25 AC7 SER B 111 LEU B 117 1 7 HELIX 26 AC8 PHE B 120 VAL B 128 1 9 HELIX 27 AC9 TYR B 131 LEU B 142 1 12 HELIX 28 AD1 ASP B 152 HIS B 165 1 14 HELIX 29 AD2 ASP B 167 GLN B 178 1 12 HELIX 30 AD3 GLY B 194 LEU B 204 1 11 HELIX 31 AD4 ASP B 215 GLU B 229 1 15 HELIX 32 AD5 GLY B 241 SER B 248 1 8 HELIX 33 AD6 VAL B 262 GLY B 271 1 10 HELIX 34 AD7 GLY B 271 PHE B 286 1 16 HELIX 35 AD8 GLY B 304 ARG B 307 5 4 HELIX 36 AD9 HIS B 308 TYR B 314 1 7 HELIX 37 AE1 TYR B 314 CYS B 323 1 10 HELIX 38 AE2 GLN B 331 ALA B 342 1 12 SHEET 1 AA1 2 LEU A 101 THR A 104 0 SHEET 2 AA1 2 GLY A 107 LEU A 110 -1 O GLY A 107 N THR A 104 SHEET 1 AA2 7 VAL A 235 SER A 238 0 SHEET 2 AA2 7 GLN A 208 ALA A 212 1 N GLY A 211 O SER A 238 SHEET 3 AA2 7 LYS A 185 LEU A 189 1 N ASP A 188 O TRP A 210 SHEET 4 AA2 7 PHE A 256 GLY A 260 1 O VAL A 258 N LEU A 187 SHEET 5 AA2 7 ASN A 290 VAL A 296 1 O ILE A 292 N ILE A 257 SHEET 6 AA2 7 GLU A 362 ARG A 369 -1 O ILE A 363 N GLU A 295 SHEET 7 AA2 7 LEU A 344 THR A 351 -1 N GLU A 350 O GLY A 364 SHEET 1 AA3 2 LEU B 101 THR B 104 0 SHEET 2 AA3 2 GLY B 107 LEU B 110 -1 O GLY B 107 N THR B 104 SHEET 1 AA4 7 VAL B 235 SER B 238 0 SHEET 2 AA4 7 GLN B 208 ALA B 212 1 N GLY B 211 O SER B 238 SHEET 3 AA4 7 LYS B 185 LEU B 189 1 N ASP B 188 O TRP B 210 SHEET 4 AA4 7 PHE B 256 GLY B 260 1 O VAL B 258 N LEU B 187 SHEET 5 AA4 7 ASN B 290 VAL B 296 1 O ILE B 292 N ILE B 257 SHEET 6 AA4 7 GLU B 362 ARG B 369 -1 O ILE B 363 N GLU B 295 SHEET 7 AA4 7 LEU B 344 THR B 351 -1 N GLU B 350 O GLY B 364 LINK O HIS A 322 NA NA A1003 1555 1555 2.40 LINK O THR A 325 NA NA A1003 1555 1555 2.39 LINK O GLN A 327 NA NA A1003 1555 1555 2.35 LINK MG MG A1001 O HOH A1134 1555 1555 2.88 LINK NA NA A1003 O HOH A1314 1555 1555 2.88 LINK NA NA A1004 O HOH A1145 1555 1555 2.48 LINK NA NA A1004 O HOH A1146 1555 1555 2.26 LINK NA NA A1004 O HOH A1184 1555 1555 2.24 LINK NA NA A1004 O HOH A1272 1555 1555 2.24 LINK O HIS B 322 NA NA B1003 1555 1555 2.40 LINK O THR B 325 NA NA B1003 1555 1555 2.44 LINK OE1 GLN B 327 MG MG B1001 1555 1555 2.24 LINK O GLN B 327 NA NA B1003 1555 1555 2.28 LINK MG MG B1001 O HOH B1189 1555 1555 2.90 LINK NA NA B1003 O HOH B1379 1555 1555 2.83 LINK NA NA B1003 O HOH B1408 1555 1555 2.33 LINK NA NA B1004 O HOH B1102 1555 1555 2.24 LINK NA NA B1004 O HOH B1174 1555 1555 2.27 LINK NA NA B1004 O HOH B1284 1555 1555 2.51 LINK NA NA B1004 O HOH B1304 1555 1555 2.40 CRYST1 147.246 65.680 74.580 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006791 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013408 0.00000